View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14428_high_41 (Length: 259)
Name: NF14428_high_41
Description: NF14428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14428_high_41 |
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Alignment Details
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 31971233 - 31971484
Alignment:
| Q |
1 |
tgcaacataattaactatgctaatgaagtaggaacatagttacatagacttgttaaatctccatttgatcactagctaaggttcaa----aatgtataat |
96 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
31971233 |
tgcaacataattaactatgctaatgaagtaggaacatagttacatagacttgttaaatctccatttgatcactagctaaggttcaatcaaaatgtataat |
31971332 |
T |
|
| Q |
97 |
ggtgcacaaatttcggacattaatggtccaccaactggaaaatggacaacaggtttatttggttgctgtgaagagcctggaaattgtaagctctttttat |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31971333 |
ggtgcacaaatttcggacattaatggtccaccaactggaaaatggacaacaggtttatttggttgctgtgaagagcctggaaattgtaagctctttttat |
31971432 |
T |
|
| Q |
197 |
gaactcttcatttcatgtctcacaaaattatatattttgcatttttattcat |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31971433 |
gaactcttcatttcatgtctcacaaaattatatattttgcatttttattcat |
31971484 |
T |
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