View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14428_low_31 (Length: 331)
Name: NF14428_low_31
Description: NF14428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14428_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 8950371 - 8950686
Alignment:
| Q |
1 |
tgtccgtatccatgcttcataggttataggaaatttgggaaatattgacacaattcaatgtttttgcccaaattggaaaagagaagaataataat---tg |
97 |
Q |
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| T |
8950371 |
tgtccgtatctatgcttcataggttataggaaatttggaaaatattgacacaattcaatgtttttgcccaaattggaaaagagaagaataataataattg |
8950470 |
T |
|
| Q |
98 |
tatggattatatggttaatttggttatttagttctgcttaagagaaaagnnnnnnngtgttacatcattcaacaagatacacaactctaactgaaataga |
197 |
Q |
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| T |
8950471 |
tatggattatatggttaatttggttatttagttctgcttaagagaaaagaaaaaaagtgttacatcattcaacgagatacacaactctaactgaaataga |
8950570 |
T |
|
| Q |
198 |
aatcataacttattctcttgttgagcaaaataaatttgtttctattatgcagagaaccatgaagctcatcttgctttggggacttccctgtttcatatgt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8950571 |
aatcataacttattctcttgttgagcaaaataaatttgtttctattatgcagagaaccatgaagctcatcttgctttggggacttccctgtttcatatgt |
8950670 |
T |
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| Q |
298 |
caatgtgtctacaaga |
313 |
Q |
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|||||||||||||||| |
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| T |
8950671 |
caatgtgtctacaaga |
8950686 |
T |
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