View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14429_high_12 (Length: 275)
Name: NF14429_high_12
Description: NF14429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14429_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 35117423 - 35117196
Alignment:
| Q |
8 |
tgactattgaaaattatggtttatgacttgatttgtataatctatactctatgaaatgaaattagttttgtaaacattatcgtatcttcgttatttcaat |
107 |
Q |
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| T |
35117423 |
tgactattgaaaattatggtttatgacttgatctgtataatctataatctatgaaatgaaattagttttgtaaacattattgtatcttcgttatttcaat |
35117324 |
T |
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| Q |
108 |
agcaaaacgcataaatttactgttttttgttaccatttcatcaaatgttatctgtttcatttcattcatcaatgtctttgttatgttatataaagcataa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35117323 |
agcaaaacgcataaatttactgttttttgttaccatttcatcaaatgttatctgtttcatttcattcatcaatgtctttgttatgttatataaagcataa |
35117224 |
T |
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| Q |
208 |
aatgaattatagttatccaaaaatacaa |
235 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
35117223 |
aatgaattatagttatccaaaaatacaa |
35117196 |
T |
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