View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14429_high_5 (Length: 470)

Name: NF14429_high_5
Description: NF14429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14429_high_5
NF14429_high_5
[»] chr8 (14 HSPs)
chr8 (15-458)||(7320671-7321110)
chr8 (15-130)||(12863767-12863882)
chr8 (15-130)||(18527743-18527858)
chr8 (15-127)||(28890653-28890764)
chr8 (16-130)||(24502345-24502459)
chr8 (15-130)||(25724281-25724395)
chr8 (22-111)||(13303516-13303605)
chr8 (22-112)||(17871998-17872085)
chr8 (32-130)||(26576971-26577068)
chr8 (32-108)||(6587141-6587218)
chr8 (15-112)||(24308531-24308628)
chr8 (42-94)||(24276856-24276908)
chr8 (32-93)||(18566198-18566258)
chr8 (15-59)||(24122147-24122191)
[»] chr7 (16 HSPs)
chr7 (15-130)||(956925-957040)
chr7 (15-130)||(12341662-12341777)
chr7 (15-130)||(17891017-17891130)
chr7 (15-130)||(24865764-24865879)
chr7 (15-92)||(19143931-19144008)
chr7 (15-92)||(20743330-20743407)
chr7 (17-112)||(7185260-7185354)
chr7 (15-112)||(26822655-26822753)
chr7 (18-130)||(8106018-8106129)
chr7 (24-93)||(1775270-1775339)
chr7 (15-92)||(4031203-4031280)
chr7 (15-86)||(10646486-10646557)
chr7 (17-112)||(11608799-11608894)
chr7 (24-94)||(1783371-1783441)
chr7 (32-113)||(15756909-15756991)
chr7 (27-93)||(20053614-20053679)
[»] chr3 (25 HSPs)
chr3 (15-130)||(9796531-9796646)
chr3 (18-112)||(17034120-17034214)
chr3 (15-112)||(17119388-17119485)
chr3 (15-131)||(11044984-11045100)
chr3 (15-130)||(14426868-14426982)
chr3 (42-131)||(5638289-5638378)
chr3 (15-130)||(20311324-20311439)
chr3 (15-130)||(24112959-24113074)
chr3 (15-130)||(38075987-38076102)
chr3 (15-112)||(4767336-4767433)
chr3 (17-130)||(13291322-13291434)
chr3 (15-112)||(4244362-4244459)
chr3 (15-97)||(4515036-4515118)
chr3 (15-130)||(4253257-4253373)
chr3 (42-94)||(14328693-14328745)
chr3 (19-111)||(16198648-16198740)
chr3 (41-94)||(14332670-14332723)
chr3 (37-130)||(17637130-17637223)
chr3 (15-59)||(15648086-15648130)
chr3 (15-95)||(19705756-19705837)
chr3 (22-109)||(20649043-20649132)
chr3 (37-130)||(23953596-23953688)
chr3 (46-130)||(20333723-20333807)
chr3 (72-112)||(31375639-31375679)
chr3 (24-92)||(46349395-46349463)
[»] chr4 (16 HSPs)
chr4 (37-131)||(20245745-20245839)
chr4 (35-129)||(11420106-11420199)
chr4 (15-130)||(8677194-8677308)
chr4 (24-111)||(22222325-22222412)
chr4 (15-94)||(11449107-11449186)
chr4 (15-112)||(19053575-19053672)
chr4 (22-107)||(19818885-19818971)
chr4 (42-112)||(20896769-20896839)
chr4 (34-92)||(21809636-21809694)
chr4 (32-93)||(16321853-16321913)
chr4 (15-94)||(11545568-11545647)
chr4 (15-70)||(12380535-12380590)
chr4 (22-59)||(11916112-11916149)
chr4 (75-112)||(13976994-13977031)
chr4 (35-92)||(47576018-47576075)
chr4 (32-92)||(22316363-22316422)
[»] chr6 (19 HSPs)
chr6 (15-130)||(26238974-26239089)
chr6 (15-130)||(11703727-11703842)
chr6 (15-105)||(17146188-17146278)
chr6 (15-130)||(24576134-24576251)
chr6 (15-132)||(17291882-17291999)
chr6 (34-130)||(10814379-10814474)
chr6 (15-127)||(29032363-29032475)
chr6 (47-111)||(30701102-30701166)
chr6 (25-111)||(18614922-18615007)
chr6 (32-93)||(10821477-10821538)
chr6 (15-107)||(12394830-12394923)
chr6 (15-84)||(22562392-22562461)
chr6 (44-107)||(21747441-21747504)
chr6 (32-113)||(1559384-1559466)
chr6 (35-93)||(7775131-7775188)
chr6 (32-112)||(14315230-14315311)
chr6 (32-93)||(21686685-21686745)
chr6 (32-108)||(6560506-6560582)
chr6 (15-106)||(14758663-14758755)
[»] chr1 (24 HSPs)
chr1 (15-130)||(31583991-31584106)
chr1 (19-130)||(34188164-34188275)
chr1 (15-130)||(14580308-14580423)
chr1 (15-130)||(1812419-1812534)
chr1 (15-112)||(12398124-12398221)
chr1 (15-96)||(41029675-41029756)
chr1 (15-130)||(10751512-10751630)
chr1 (22-130)||(15787385-15787492)
chr1 (17-112)||(33439289-33439384)
chr1 (24-112)||(12668690-12668778)
chr1 (24-132)||(15650709-15650816)
chr1 (32-112)||(17087774-17087854)
chr1 (15-92)||(2973421-2973498)
chr1 (15-128)||(17103012-17103125)
chr1 (15-130)||(17496277-17496391)
chr1 (35-112)||(27983302-27983379)
chr1 (22-111)||(37282943-37283032)
chr1 (32-85)||(43282136-43282189)
chr1 (22-130)||(10154481-10154588)
chr1 (26-112)||(19018753-19018839)
chr1 (23-112)||(1616004-1616093)
chr1 (43-108)||(19365703-19365768)
chr1 (15-59)||(18129686-18129730)
chr1 (34-94)||(19337152-19337212)
[»] scaffold0804 (1 HSPs)
scaffold0804 (15-128)||(27-140)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-112)||(319049-319146)
[»] chr2 (26 HSPs)
chr2 (15-112)||(35665791-35665888)
chr2 (45-130)||(42256589-42256674)
chr2 (35-130)||(18848739-18848833)
chr2 (24-111)||(22311200-22311287)
chr2 (26-111)||(25916196-25916281)
chr2 (35-130)||(15375984-15376080)
chr2 (24-112)||(29410043-29410131)
chr2 (66-130)||(17568416-17568480)
chr2 (39-130)||(22269067-22269158)
chr2 (15-124)||(13074093-13074203)
chr2 (22-112)||(21547887-21547977)
chr2 (33-112)||(18038712-18038792)
chr2 (15-87)||(23959732-23959804)
chr2 (17-111)||(27765297-27765391)
chr2 (27-92)||(24764139-24764204)
chr2 (27-92)||(25348466-25348530)
chr2 (24-112)||(17417077-17417165)
chr2 (48-112)||(21585042-21585106)
chr2 (32-108)||(26654329-26654404)
chr2 (32-87)||(16197129-16197183)
chr2 (15-130)||(16586558-16586672)
chr2 (15-58)||(17569250-17569293)
chr2 (32-87)||(26652807-26652861)
chr2 (22-79)||(19565064-19565121)
chr2 (32-108)||(27483803-27483879)
chr2 (15-59)||(33705734-33705778)
[»] chr5 (13 HSPs)
chr5 (42-130)||(26335193-26335281)
chr5 (34-112)||(24492067-24492145)
chr5 (32-94)||(16182670-16182732)
chr5 (27-105)||(18821095-18821173)
chr5 (15-130)||(24837956-24838070)
chr5 (16-59)||(17337751-17337794)
chr5 (32-93)||(9824664-9824724)
chr5 (15-95)||(20237110-20237191)
chr5 (32-93)||(25570139-25570199)
chr5 (15-131)||(20690441-20690557)
chr5 (32-112)||(22186404-22186484)
chr5 (32-92)||(24884889-24884948)
chr5 (282-322)||(38402755-38402795)
[»] scaffold0053 (1 HSPs)
scaffold0053 (22-112)||(28290-28380)
[»] scaffold0329 (1 HSPs)
scaffold0329 (15-112)||(4662-4759)
[»] scaffold0161 (1 HSPs)
scaffold0161 (32-111)||(5467-5545)
[»] scaffold0402 (1 HSPs)
scaffold0402 (34-94)||(209-269)


Alignment Details
Target: chr8 (Bit Score: 351; Significance: 0; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 15 - 458
Target Start/End: Complemental strand, 7321110 - 7320671
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  7321110 attttaatctatggtcgtgcacacttaaacatatattagcatataaaatagttcttcaatactttgttatcatcaaaacttcagagacattgtaaaaatt 7321011  T
Q  115 gaattttgttccaacactgttgccttcctnnnnnnnntaaggtcattacaaaccttctatatggactacaaaacaaaatgtttgaccaaaatcaaaccta 214  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7321010 gaattttgttccaacactgttgccttcctaaaaaaattaaggtcattacaaaccttctatatggactacaaaacaaaatgtttgaccaaaatcaaaccta 7320911  T
Q  215 actgaatcttagacttgtcgcttacagatccaaaaactgtgaaatgccttgccaaattcagagaaaaaaccaattctcaacctaaccagctacaaacact 314  Q
    |    ||||||||||||||||||| ||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7320910 a----atcttagacttgtcgcttatagaccaaaaaactgtgaaaagccctgccaaattcagagaaaaaaccaattctcaacctaaccagctacaaacact 7320815  T
Q  315 ataccacaccttgaaaacgaaatcacaaatgacataaagtgatcacctaacgtacttcactaatacgccacaaaacacatatgataagccactcaaatca 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  7320814 ataccacaccttgaaaacgaaatcacaaatgacataaagtgatcacctaacgtactccactaataccccacaaaacacacatgataagccactcaaatca 7320715  T
Q  415 aggataaacctacaacgaaagatattttggtggctaggaaccct 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7320714 aggataaacctacaacgaaagatattttggtggctaggaaccct 7320671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 12863767 - 12863882
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| || |||||||||||||| |||||| |||||| ||| ||| ||||||||||||||||||| |||||||||| | |||||||||||||    
T  12863767 attttaatatatggtcctgcacacttaaacacatattaacatatccaattgttgttcaatactttgttatcatcaaaacttcagtgacattgtacaaatt 12863866  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  12863867 caattttgttccaaca 12863882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 18527858 - 18527743
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||| ||||  ||||||| || ||||||| ||||| |||||||||||     
T  18527858 attttaatctatgatcctgcacacttaaacatattttagcatatctaattgttctttaatatcttgttataatcaaaactttagaggtattgtacaaatg 18527759  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  18527758 caattttgttccaaca 18527743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 28890653 - 28890764
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||||| || |||||||||||| ||||||||||||||| |||  ||||| |||||||||||||||| ||||| | |||||  ||||||||| |    
T  28890653 attttaatctatggtcctgcacacttaaatatatattagcatatccaattattctttaatactttgttatcatcaaaaccttagaggggttgtacaaa-t 28890751  T
Q  115 gaattttgttcca 127  Q
     ||||||||||||    
T  28890752 caattttgttcca 28890764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 24502459 - 24502345
Alignment:
Q  16 ttttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattg 115  Q
    |||||||||||| |  |||| |||| || ||||||||||||||| ||| |||||| |||||||| ||||||| ||||||| ||||| ||||||||| |      
T  24502459 ttttaatctatggtactgcatacttgaatatatattagcatatccaattgttctttaatactttattatcatcaaaactttagaggtattgtacaattat 24502360  T
Q  116 aattttgttccaaca 130  Q
    |||||||||||||||    
T  24502359 aattttgttccaaca 24502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 25724395 - 25724281
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| || |||||| || ||||||||||| |||||| ||| |||||||| |||||||||||||| || ||| |||||  | |||||||| |    
T  25724395 attttaatttatggtcctgcacagttgaacatatattatcatatccaattgttcttcagtactttgttatcattaatactccagagaaaatgtacaaact 25724296  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  25724295 -aattttgttccaaca 25724281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 13303516 - 13303605
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||||| ||||||||| |||| ||||||| ||||| ||| ||| ||||||| ||||||||||| ||||| | ||||| |||||||||    
T  13303516 tctatgatcttgcacacttgaacaaatattagtatatccaattgtttttcaatattttgttatcatcaaaaccttagaggaattgtacaa 13303605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 17872085 - 17871998
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||| |||| |||| |||| | ||||||||||||||| ||||||  |||| |||||||||| |||||||   ||||||||||||||    
T  17872085 tctatgatcctgcatacttgaacacaaattagcatatcaaattgttcttttatacattgttatcatcaaaactt---aggcattgtacaaa 17871998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 26576971 - 26577068
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    ||||||||| || |||||||||||||| |||| ||||||  ||| ||| |||||||  |||||| ||||| |||||| ||||| |||||| ||||||||    
T  26576971 tgcacacttgaatatatattagcatattaaattgttctttgatattttattatcat-caaactttagaggtattgtataaattcaattttattccaaca 26577068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 6587218 - 6587141
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttctt-caatactttgttatcataaaaacttcagaggcattgta 108  Q
    |||| ||||||||||| |||| |||||| ||| |||||| | | |||||||||| || ||||||||||||||||||||    
T  6587218 tgcatacttaaacatacattaacatatccaattgttctttctagactttgttataatcaaaacttcagaggcattgta 6587141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 24308628 - 24308531
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||| |||| || ||| ||||| ||||||||||  |||||| |||  || || |||||||||||||||| ||||| | ||||| ||||||||||    
T  24308628 attttaatttatggtcctgcgcacttgaacatatattcacatatccaatttttatttaatactttgttatcatcaaaaccttagaggaattgtacaaa 24308531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 24276908 - 24276856
Alignment:
Q  42 aacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    ||||||||||| |||||| ||| ||||| ||||||||||||||||| ||||||    
T  24276908 aacatatattaacatatccaattgttctacaatactttgttatcatcaaaact 24276856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 18566198 - 18566258
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    ||||||||| ||||||| |||| || || ||| ||||||||||||||||||||||| |||||    
T  18566198 tgcacacttgaacatatgttagtat-tccaattgttcttcaatactttgttatcatcaaaac 18566258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 24122147 - 24122191
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatc 59  Q
    ||||||||||||| || ||||||||| |||| |||||||||||||    
T  24122147 attttaatctatggtcctgcacacttgaacacatattagcatatc 24122191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 956925 - 957040
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| || |||||||||||||||||| || |||||  ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  956925 attttaatttatgttcctgcacacttaaacatatactaacatattcaatcgttcttcattactttgttatcatcaaaacttcagaggcattgtacaaatt 957024  T
Q  115 gaattttgttccaaca 130  Q
     ||||||||| |||||    
T  957025 caattttgtttcaaca 957040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 12341662 - 12341777
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||||||| ||| |  |||||||||||||||||| |||||  |||  ||||| |||||||||||||||| |||| || |||||||||||||||||     
T  12341662 attttaatctataatcttagacacttaaacatatattaacatattcaatttttctttaatactttgttatcatcaaaattttagaggcattgtacaaatc 12341761  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  12341762 caattttgttccaaca 12341777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 17891130 - 17891017
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||||| || ||||||| ||| |||||||||||||||| ||| |||||| |||| ||||||||||| ||||||  ||||| ||| |||||| |    
T  17891130 attttaatctatggtcctgcacacctaa-catatattagcatatctaattgttctttaatattttgttatcatcaaaactctagaggaattatacaaa-t 17891033  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  17891032 aaattttgttccaaca 17891017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 24865764 - 24865879
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| ||||||| |||| |||| | ||||||| | |||||| ||| ||| ||  ||||||||||||||| ||||||| |||||||||||| ||| |    
T  24865764 attttaatttatgatcctgcatacttgaccatatatcaacatatccaattgtttttatatactttgttatcatcaaaactttagaggcattgtataaagt 24865863  T
Q  115 gaattttgttccaaca 130  Q
     || ||||||||||||    
T  24865864 caaatttgttccaaca 24865879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 19143931 - 19144008
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    ||||||||||||| || | |||| || |||||||||||||||||| ||| ||| || |||||||||||||||||||||    
T  19143931 attttaatctatggtccttcacaattgaacatatattagcatatccaattgttatttaatactttgttatcataaaaa 19144008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 20743330 - 20743407
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    ||||||||||||| || | |||| || |||||||||||||||||| ||| ||| || |||||||||||||||||||||    
T  20743330 attttaatctatggtccttcacaattgaacatatattagcatatccaattgttatttaatactttgttatcataaaaa 20743407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 7185354 - 7185260
Alignment:
Q  17 tttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||| ||||||||| || |||||| |||| ||||||||||||| ||| || |||||||||||||||||||| ||| ||| ||| | ||||||||||    
T  7185354 tttattctatgatcatgtacacttgaacaaatattagcatatccaattgtccttcaatactttgttatcatcaaacctt-agatgaattgtacaaa 7185260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 26822655 - 26822753
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttc-ttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||||| |  | |||||||||||||||||||||||||| ||| |||| || ||||||||||||| || ||||| | ||| | ||||||||||    
T  26822655 attttaatctatggtactacacacttaaacatatattagcatatccaattgttcttttaatactttgttattatcaaaaccttagatgaattgtacaaa 26822753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 8106018 - 8106129
Alignment:
Q  18 ttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaa 117  Q
    ||||| |||| || ||||||||  || ||||||||||||||| |||  ||||| |||||||||||||||| |||||   ||||| ||||||||||   ||    
T  8106018 ttaatatatggtcctgcacactataagatatattagcatatctaattattctttaatactttgttatcatcaaaaccctagaggaattgtacaaa-ccaa 8106116  T
Q  118 ttttgttccaaca 130  Q
    |||||||||||||    
T  8106117 ttttgttccaaca 8106129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 1775339 - 1775270
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    ||||||| ||||||||| |||||| ||||||||||| |||  || ||||||| ||||||||||| |||||    
T  1775339 tatgatcctgcacacttgaacatagattagcatatccaattattattcaataatttgttatcatcaaaac 1775270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 4031280 - 4031203
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    |||||||| ||||||| ||||||||| ||||||||||| || ||| |||  ||||| |||||||| ||||||| ||||    
T  4031280 attttaatatatgatcatgcacacttgaacatatattaacacatctaattattctttaatactttattatcatcaaaa 4031203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 10646557 - 10646486
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatca 86  Q
    |||||| | |||| || ||||||||| ||||||| ||| |||||| ||| ||| ||||||||||||||||||    
T  10646557 attttattatatggtcctgcacacttgaacatatgttaacatatccaattgttattcaatactttgttatca 10646486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 11608894 - 11608799
Alignment:
Q  17 tttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||| || |||| |||| |||| | ||||||||||| ||| |||||| ||||| |  ||||||| ||||| |||||| ||| |||||||    
T  11608894 tttaatctatgctcctgcatactttaacacaaattagcatatctaattgttctttaatacctaattatcatcaaaacatcagagacatcgtacaaa 11608799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 1783371 - 1783441
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    ||||||| ||||||||| |||| ||||||   |||| ||| ||||||||| ||||||||||||| ||||||    
T  1783371 tatgatcctgcacacttgaacacatattaaattatccaattgttcttcaaaactttgttatcatcaaaact 1783441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 15756991 - 15756909
Alignment:
Q  32 tgcacacttaaacatatattagcatat-caaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaat 113  Q
    ||||||||| || |||||||||||||| ||||| |||||| ||| | || ||||||| ||||||| ||| | |||||||||||    
T  15756991 tgcacacttgaatatatattagcatattcaaattgttctttaatgcattattatcatcaaaactttagatgtattgtacaaat 15756909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 20053614 - 20053679
Alignment:
Q  27 gatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    |||| ||||||||| ||||||| |||| || || ||| ||||||||||||||||||||||| |||||    
T  20053614 gatcctgcacacttgaacatatgttagtat-tccaattgttcttcaatactttgttatcatcaaaac 20053679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 9796531 - 9796646
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||| ||| |||||| |||||||| ||||||| ||||||||||||  |||||||||| |    
T  9796531 attttaatctatgatcctgcacacttgaacatatattaacatatccaattgttctttaatactttattatcatcaaaacttcagagaaattgtacaaaat 9796630  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  9796631 caattttgttccaaca 9796646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 17034214 - 17034120
Alignment:
Q  18 ttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||||||||||||||| ||||| ||||| |||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17034214 ttaatctatgatcgtgcacacttgaacatgtattaacatatccaattgttcttcaatacattgttatcatcaaaacttcagaggcattgtacaaa 17034120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 17119388 - 17119485
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||||| || ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| | | ||| ||||||||||    
T  17119388 attttaatctatggtcctgcacacttaaacatatattaacataccaaatagttctttaatactttgttatcataaaaaccttataggaattgtacaaa 17119485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 11044984 - 11045100
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||| || | |  |||||||||| |     
T  11044984 attttaatctataatcatgcacacttaaacatatattagcatatctcattgttcttcaatactttgttatcatcaaaattttataaacattgtacaattc 11045083  T
Q  115 gaattttgttccaacac 131  Q
     |||||| |||||||||    
T  11045084 caattttattccaacac 11045100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 14426982 - 14426868
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||||| || || ||||||||| |||||||||||||||||| ||| |||||| |||||||||||||||| ||||  | ||||| ||||||||||      
T  14426982 attttaatctttggtcctgcacacttgaacatatattagcatatccaattgttctttaatactttgttatcatcaaaatcttagaggaattgtacaaa-c 14426884  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  14426883 caattttgttccaaca 14426868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 5638378 - 5638289
Alignment:
Q  42 aacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaacac 131  Q
    ||||||||||| |||||| ||| |||||||||||||||||||| || ||||||| | ||||||||||||||||  ||||||||| |||||    
T  5638378 aacatatattaacatatctaattgttcttcaatactttgttattatcaaaactttaaaggcattgtacaaattccattttgttcgaacac 5638289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 20311439 - 20311324
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||| | |||| || ||||||||| |||||||||||||||||| ||| |||||| |||||||||||||||| ||||||  ||||| ||| ||||||      
T  20311439 attttattttatggtcatgcacacttgaacatatattagcatatccaattgttcttaaatactttgttatcatcaaaactctagaggaattatacaaaac 20311340  T
Q  115 gaattttgttccaaca 130  Q
     ||||||||| |||||    
T  20311339 aaattttgtttcaaca 20311324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 24112959 - 24113074
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||||||||||| ||||  ||| || | |||||||||||||  |  |||||||||||||||| |||||||||||||| |||||||||||  |||||    
T  24112959 attttaatctatgatcctgcatgcttgaatacatattagcatatcccactgttcttcaatactttgctatcataaaaactttagaggcattgtctaaatt 24113058  T
Q  115 gaattttgttccaaca 130  Q
      |||||||| |||||    
T  24113059 ccattttgtttcaaca 24113074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 38076102 - 38075987
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| |  ||||||||| | |||||||||| ||||| ||| |||||||||||||||||| |||| ||||  | ||||| |||||||||| |    
T  38076102 attttaatatatggttatgcacacttgagcatatattagtatatctaattgttcttcaatactttgttgtcatcaaaatcttagaggaattgtacaaaat 38076003  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  38076002 caattttgttccaaca 38075987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 4767433 - 4767336
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||| |||||||  || ||||||||| |||||||||||||||||| |||  ||||| |||||||||||||||| ||||| | ||||| ||||||||||    
T  4767433 atttaaatctatcgtcctgcacacttgaacatatattagcatatctaattattctttaatactttgttatcatcaaaaccttagaggaattgtacaaa 4767336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 13291434 - 13291322
Alignment:
Q  17 tttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattga 116  Q
    |||||||| || || ||||||||| ||||||||||| |||||| ||| |||||||||||||||||||| || ||| ||  ||||| ||||||||||   |    
T  13291434 tttaatctttggtcctgcacacttgaacatatattaacatatctaattgttcttcaatactttgttattatcaaatctctagaggaattgtacaaa-cca 13291336  T
Q  117 attttgttccaaca 130  Q
    ||||||||||||||    
T  13291335 attttgttccaaca 13291322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 4244362 - 4244459
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||||||||||| ||||||||| |||| |||||| | |||| ||| ||||||||||  ||||||||||| |||||||  |||| ||||| ||||    
T  4244362 attttaatctatgatcttgcacacttgaacacatattaacttatccaattgttcttcaatgttttgttatcatcaaaacttttgaggtattgtccaaa 4244459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 4515036 - 4515118
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttca 97  Q
    |||||||| |||| || ||||||||| ||||||||||| |||||| | | ||| ||||||||||||||||||| || ||||||    
T  4515036 attttaatatatggtcctgcacacttgaacatatattaacatatccagttgtttttcaatactttgttatcatcaatacttca 4515118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 4253257 - 4253373
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatc-aaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaat 113  Q
    ||||||||||| | || ||||||||| |||| |||||| | |||| |||| |||||||||||||||||||| || ||||||| | |||||| | |||||     
T  4253257 attttaatctacggtcctgcacacttgaacacatattaacttatccaaattgttcttcaatactttgttattatcaaaactttataggcatcggacaaaa 4253356  T
Q  114 tgaattttgttccaaca 130  Q
    |  |||||||| |||||    
T  4253357 tccattttgtttcaaca 4253373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 14328693 - 14328745
Alignment:
Q  42 aacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||| ||||||    
T  14328693 aacatatattagcatatccaactgttcttcaatactttgttatcatcaaaact 14328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 16198740 - 16198648
Alignment:
Q  19 taatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||||| || ||||||||| |||| ||||||| ||||| |||  |||||||||||||||||||||  ||||| | ||| | |||||||||    
T  16198740 taatctatgttcctgcacacttgaacaaatattagtatatccaattattcttcaatactttgttatcaacaaaaccttagatgaattgtacaa 16198648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 14332670 - 14332723
Alignment:
Q  41 aaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    ||||||||||||||||||| ||  |||||||||||||||||||| || ||||||    
T  14332670 aaacatatattagcatatccaactgttcttcaatactttgttataatcaaaact 14332723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 17637223 - 17637130
Alignment:
Q  37 acttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    |||| ||||||||| |||||||| ||| |||||| | || ||||||||||| |||||   ||||| ||||||||||   |||||||||||||||    
T  17637223 acttgaacatatatcagcatatccaattgttctttactaatttgttatcatcaaaacactagaggaattgtacaaaaccaattttgttccaaca 17637130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 15648086 - 15648130
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatc 59  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||    
T  15648086 attttagtctatgatcctgcacacttaaacaaatattagcatatc 15648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 19705756 - 19705837
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttc-ttcaatactttgttatcataaaaactt 95  Q
    |||||| |||||| || ||||||||| |||| ||||||||||||| ||| |  | || |||||||||||||||| |||||||    
T  19705756 attttagtctatggtcatgcacacttgaacaaatattagcatatccaattgaacttttaatactttgttatcatcaaaactt 19705837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 20649043 - 20649132
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttct-tcaatac-tttgttatcataaaaacttcagaggcattgtac 109  Q
    ||||||||| |||| ||||||||| ||||||||||||  ||| ||||| |  |||| ||||||||||| ||||||||| ||| |||||||    
T  20649043 tctatgatcctgcatacttaaacacatattagcatattcaattgttctatttatacttttgttatcatcaaaacttcaaaggtattgtac 20649132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 23953688 - 23953596
Alignment:
Q  37 acttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    |||| |||| ||||| |||| || ||| |||||| |||||||||||||||| |||||||  ||||  ||||||||| | ||||||||| |||||    
T  23953688 acttgaacaaatattggcatttccaattgttctttaatactttgttatcatcaaaactt-tgaggatttgtacaaaatcaattttgtttcaaca 23953596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 20333807 - 20333723
Alignment:
Q  46 tatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    |||||||||||||| ||| ||||||| ||||||||||||| | |||| |  ||||| ||| || |||   |||||||||||||||    
T  20333807 tatattagcatatccaattgttcttcgatactttgttatcgtcaaaattctagaggaattatataaaacaaattttgttccaaca 20333723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 31375639 - 31375679
Alignment:
Q  72 aatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||| |||||||||| |||||||||||||||| |||||||    
T  31375639 aataccttgttatcatcaaaacttcagaggcatggtacaaa 31375679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 46349395 - 46349463
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    ||||||| ||||||||| |||| ||||||  ||||   || ||||||||||||||||||||||| ||||    
T  46349395 tatgatcatgcacacttgaacaaatattaatatattctattgttcttcaatactttgttatcatcaaaa 46349463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 20245745 - 20245839
Alignment:
Q  37 acttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaacac 131  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||    
T  20245745 acttaaacatatactagcatatccaattgttcttcaatactttgttatcatcaaaacatcagaggcattgtacaaatccaattttgttccaacac 20245839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 11420106 - 11420199
Alignment:
Q  35 acacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaac 129  Q
    |||||| ||||||||||| |||||| ||| |||||| |||| ||||||||||| ||||| | ||||| |||||||||||| ||||||||||||||    
T  11420106 acacttgaacatatattatcatatccaattgttctttaatattttgttatcatcaaaaccttagaggaattgtacaaatt-aattttgttccaac 11420199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 8677308 - 8677194
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| | ||||| ||||||||| ||||||||||| |||||  ||| ||| || |||||||||||||||| ||||||  ||||| ||||||||||      
T  8677308 attttaatatgtgatcttgcacacttgaacatatattaacatattcaattgttttttaatactttgttatcatcaaaactctagaggaattgtacaaa-c 8677210  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  8677209 caattttgttccaaca 8677194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 22222412 - 22222325
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||| | ||||||| |||||||||||| || || | | ||||||||||||||||||||||| ||||| | ||||| |||||||||    
T  22222412 tatgatcctacacacttgaacatatattagtatgtccacttgttcttcaatactttgttatcatcaaaaccttagaggaattgtacaa 22222325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 11449186 - 11449107
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    |||||||| |||| || ||||||||| ||||||||||| ||| || ||| ||||||||||| | ||||||||| ||||||    
T  11449186 attttaatatatggtcctgcacacttgaacatatattaacatgtccaattgttcttcaatattgtgttatcatcaaaact 11449107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 19053575 - 19053672
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatac-tttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||| |||| ||  |||||||| |||||||||||||||||| ||| |||||| ||||| ||||||||||| ||||||  ||||| |||| |||||    
T  19053575 attttaatttatggtccagcacacttgaacatatattagcatatctaattgttctt-aatacttttgttatcatcaaaactctagaggaattgaacaaa 19053672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 19818971 - 19818885
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttc-ttcaatactttgttatcataaaaacttcagaggcattgt 107  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| | || || ||||  |||||||||| ||||||| |||||||||||    
T  19818971 tctatgatcctgcacacttgaacaaatattagcatatccaattgatcttttaataacttgttatcatcaaaactttagaggcattgt 19818885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 20896839 - 20896769
Alignment:
Q  42 aacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||||||||||||| ||| |||||| |||||||| ||||||| ||||  | ||||| ||||||||||    
T  20896839 aacatatattagcatatccaattgttctttaatactttattatcatcaaaatcttagaggaattgtacaaa 20896769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 21809694 - 21809636
Alignment:
Q  34 cacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    |||||||||||||||||||||||||| ||| ||| || |||| ||||||||||| ||||    
T  21809694 cacacttaaacatatattagcatatccaattgttttttaatattttgttatcatcaaaa 21809636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 16321913 - 16321853
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    ||||||||| ||||||| |||| || |||||| ||||||||||||||||||||||| |||||    
T  16321913 tgcacacttgaacatatgttagtat-tcaaattgttcttcaatactttgttatcatcaaaac 16321853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 11545568 - 11545647
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    |||||||| |||| || ||||||||| ||||||||||| ||| || ||| ||| ||||||| | ||||||||| ||||||    
T  11545568 attttaatatatggtcctgcacacttgaacatatattaacatgtccaattgtttttcaatattgtgttatcatcaaaact 11545647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 12380535 - 12380590
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttctt 70  Q
    |||||||| |||| || |||||||||||||||||||||| ||||| ||| ||||||    
T  12380535 attttaatatatggtcatgcacacttaaacatatattagaatatccaattgttctt 12380590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 11916112 - 11916149
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatc 59  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  11916112 tctatgatcttgcacacttaaacaaatattagcatatc 11916149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 13977031 - 13976994
Alignment:
Q  75 actttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13977031 actttgttatcatcaaaacttcagaggcaatgtacaaa 13976994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 47576018 - 47576075
Alignment:
Q  35 acacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    |||||| |||||||||||||||||  ||  |||||| |||||||||||||||| ||||    
T  47576018 acacttgaacatatattagcatattcaagtgttctttaatactttgttatcatcaaaa 47576075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 22316422 - 22316363
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    ||||||||| ||||||| |||| || || ||| ||||||||||||||||||||||| ||||    
T  22316422 tgcacacttgaacatatgttagtat-tccaattgttcttcaatactttgttatcatcaaaa 22316363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 8e-28; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 26238974 - 26239089
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| || ||||  |||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||    
T  26238974 attttaatttatggtcatgcatgcttaaaaatatattagcatatccaattgttcttcaatactttgttatcatcaaaactgcagtggcattgtgcaaatt 26239073  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  26239074 caattttgttccaaca 26239089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 11703842 - 11703727
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatac-tttgttatcataaaaacttcagaggcattgtacaaat 113  Q
    |||||||||||||||| ||||||||||||||||||||||||| |  ||| |||||  ||||| ||||||||||| ||||||| ||||  ||||||||||     
T  11703842 attttaatctatgatcatgcacacttaaacatatattagcatttacaattgttctataatacttttgttatcatcaaaactttagagcaattgtacaaac 11703743  T
Q  114 tgaattttgttccaaca 130  Q
    | ||||||||| |||||    
T  11703742 t-aattttgtttcaaca 11703727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 17146278 - 17146188
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcatt 105  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||  ||| |||||| | |||||||||||||||||||  ||| |||||||    
T  17146278 attttaatatatgatcctgcacacttaaatatatattagcatatacaattgttctttagtactttgttatcataaaaaaatcataggcatt 17146188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 24576134 - 24576251
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatat--tagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||| |||||| || |||||| || || ||||||  ||||||||| ||| |||||| |||||||||||||||| ||||||  ||||| ||||||| ||    
T  24576134 attttagtctatggtcatgcacatttgaatatatatactagcatatccaattgttcttgaatactttgttatcatcaaaactctagaggtattgtacgaa 24576233  T
Q  113 ttgaattttgttccaaca 130  Q
    || |||||||||||||||    
T  24576234 ttaaattttgttccaaca 24576251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 17291882 - 17291999
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||||||||||| | |||||||||||||||||||||||||  |||  ||||| || | ||||||||||| |||| || | ||  |||||  |||||    
T  17291882 attttaatctatgatcttacacacttaaacatatattagcatattcaattattctttaagattttgttatcatcaaaattttaaagatattgtctaaatt 17291981  T
Q  115 gaattttgttccaacact 132  Q
     |||||||||||||||||    
T  17291982 caattttgttccaacact 17291999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 10814474 - 10814379
Alignment:
Q  34 cacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    ||||||||||| |||||||||||||| ||| |||||| ||| |||||||| ||| ||||| | ||||| ||||||||||   |||||||||||||||    
T  10814474 cacacttaaacgtatattagcatatccaattgttctttaattctttgttaccatcaaaaccttagaggaattgtacaaa-ccaattttgttccaaca 10814379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 29032363 - 29032475
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||| |||| ||||| ||  || ||||||||||||||  ||| |||||| |||||||||||||||| ||||||  |||||  || |||||||     
T  29032363 attttaatctaagatcctgcactctagaatatatattagcatattcaattgttctttaatactttgttatcatcaaaactctagaggtgttatacaaatc 29032462  T
Q  115 gaattttgttcca 127  Q
     ||||||||||||    
T  29032463 caattttgttcca 29032475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 30701166 - 30701102
Alignment:
Q  47 atattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||||||||| ||| ||||||  ||||||||||||||| |||||||||||| ||||||||||    
T  30701166 atattagcatatccaattgttcttttatactttgttatcatcaaaacttcagagacattgtacaa 30701102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 18615007 - 18614922
Alignment:
Q  25 atgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    |||||| ||||||||| |||| ||||||| |||| | || ||||||||||||||||||||||| ||||| | ||||| |||||||||    
T  18615007 atgatcctgcacacttgaacaaatattagtatattacattgttcttcaatactttgttatcatcaaaacct-agaggaattgtacaa 18614922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 10821477 - 10821538
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    ||||||||| |||| ||||||  ||||| ||| ||||||||||||||||||||||| |||||    
T  10821477 tgcacacttgaacacatattaatatatctaattgttcttcaatactttgttatcatcaaaac 10821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 12394830 - 12394923
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttc-ttcaatactttgttatcataaaaacttcagaggcattgt 107  Q
    |||||| |||||| || ||||||||| |||| |||||| |||||| ||| | || || |||||||||||||||| ||||||  |||||||||||    
T  12394830 attttagtctatggtcctgcacacttgaacaaatattaacatatctaattgatcatttaatactttgttatcatcaaaactgaagaggcattgt 12394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 22562461 - 22562392
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttat 84  Q
    ||||||||||||  || ||||||||| |||||||||| ||||||| |||  ||||| |||||||||||||    
T  22562461 attttaatctatagtcctgcacacttgaacatatattcgcatatccaatttttctttaatactttgttat 22562392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 21747441 - 21747504
Alignment:
Q  44 catatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgt 107  Q
    |||||||||||||||| |||  ||||| ||||||||||||| || || |||| |||||||||||    
T  21747441 catatattagcatatccaatttttctttaatactttgttattatcaacactttagaggcattgt 21747504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 1559384 - 1559466
Alignment:
Q  32 tgcacacttaaacatatattagcatat-caaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaat 113  Q
    ||||||||| || |||||||||||||| ||||| |||||| ||| | || ||||||| ||||||| ||| | |||||||||||    
T  1559384 tgcacacttgaatatatattagcatattcaaattgttctttaatgcattattatcatcaaaactttagatgtattgtacaaat 1559466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 7775188 - 7775131
Alignment:
Q  35 acacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    |||||| |||||||||||| || |||| || |||||||||||||||||||||| |||||    
T  7775188 acacttgaacatatattagtatttcaatta-ttcttcaatactttgttatcatcaaaac 7775131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 14315311 - 14315230
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttctt-caatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||| |||| |||| ||||||||||||  ||| ||| || ||||| ||||||||||| ||||||||| || |||||||||||    
T  14315311 tgcaaacttgaacacatattagcatattcaattgttttttcaatagtttgttatcatcaaaacttcaaagacattgtacaaa 14315230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 21686745 - 21686685
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    ||||||||| ||||||| |||| || || ||| ||||||||||||||||| |||||||||||    
T  21686745 tgcacacttgaacatatgttagtat-tccaattgttcttcaatactttgtcatcataaaaac 21686685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 6560582 - 6560506
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgta 108  Q
    |||| |||||||||||||||| |||||   ||  |||||||  ||||||||||||| ||||||| |||| |||||||    
T  6560582 tgcaaacttaaacatatattaccatattcgatttttcttcatcactttgttatcatcaaaactttagagacattgta 6560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 14758663 - 14758755
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttc-ttcaatactttgttatcataaaaacttcagaggcattg 106  Q
    |||||| |||||| || | ||||||| |||| ||||||||||||| ||| |  | || ||||| |||||||||| ||||||| ||||||||||    
T  14758663 attttagtctatggtccttcacacttgaacaaatattagcatatccaattgaacttttaataccttgttatcatcaaaacttaagaggcattg 14758755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 31584106 - 31583991
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||||| || ||||||||||| ||  ||||| |||||| |||  |||||||||||||||||||||| ||||| ||||||||||||||||||      
T  31584106 attttaatctatggtcctgcacacttaagcacgtattaacatatccaattattcttcaatactttgttatcatcaaaacatcagaggcattgtacaaaac 31584007  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  31584006 caattttgttccaaca 31583991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 34188164 - 34188275
Alignment:
Q  19 taatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaat 118  Q
    ||||||||| || ||||| | |||||||||||||||||||  ||| ||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||    
T  34188164 taatctatggtcctgcacgcgtaaacatatattagcatattcaattgtttttcaatactttgttatcatcaaaacttcaaaggcattgtacaaatttaat 34188263  T
Q  119 tttgttccaaca 130  Q
    ||| || |||||    
T  34188264 tttcttacaaca 34188275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 14580423 - 14580308
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||| |||| ||||| ||| ||||||||||| |||||| ||| |||||| |||||||||||||||| |||| || | |||||||| ||||||     
T  14580423 attttaatctaagatcctgcactcttgaacatatattaacatatctaattgttctttaatactttgttatcatcaaaattttaaaggcattggacaaatc 14580324  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  14580323 caattttgttccaaca 14580308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 1812534 - 1812419
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| || |||||||||||||||||||||||||||   || ||| ||| |||||||||||| || |||| || |||| ||||||||||||     
T  1812534 attttaatttatggtcatgcacacttaaacatatattagcatattcgattgtttttcgatactttgttataatcaaaattttagagacattgtacaaatc 1812435  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  1812434 taattttgttccaaca 1812419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 12398124 - 12398221
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||||  || ||||||||| |||||||||||||||||  |||  |||||||||||||| ||||||| ||||||| ||||| ||||||||||    
T  12398124 attttaatctatagtcatgcacacttgaacatatattagcatattcaattattcttcaatactttattatcatcaaaactttagaggaattgtacaaa 12398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 41029675 - 41029756
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttc 96  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||  ||||||||    
T  41029675 attttaatttatgatcctgcacacttaaacatatatcagcatatccaattgttcttcattactttgttatcaacaaaacttc 41029756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 10751512 - 10751630
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcat---atcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||||||||  || ||||||||| | |||||||||||||   ||| ||| |||||| |||||||||||||||| ||||||| |||| ||||||||||    
T  10751512 attttaatctatagtcctgcacacttgagcatatattagcatcatatccaattgttctttaatactttgttatcatcaaaactttagagacattgtacaa 10751611  T
Q  112 attgaattttgttccaaca 130  Q
    ||  ||||||||| |||||    
T  10751612 atcaaattttgtttcaaca 10751630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 15787492 - 15787385
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaatttt 121  Q
    ||||||||| |||||| || |||| ||||||  ||||| ||| |||| |||||||||||||||||| ||||| | ||||| |||||||||| | ||||||    
T  15787492 tctatgatcctgcacatttgaacaaatattaatatatccaattgttcgtcaatactttgttatcatcaaaaccttagaggaattgtacaaa-tcaatttt 15787394  T
Q  122 gttccaaca 130  Q
    |||||||||    
T  15787393 gttccaaca 15787385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 33439289 - 33439384
Alignment:
Q  17 tttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||| || ||||||||| | |||||||||||||||| ||| |||||| ||||| |||||||||| |||| |  ||||| ||||||||||    
T  33439289 tttaatctatggtcctgcacacttgatcatatattagcatatctaattgttctttaataccttgttatcatcaaaattctagaggaattgtacaaa 33439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 12668778 - 12668690
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||| | ||||||| |||| |||||||||||| |||| | ||||||||| ||||||||||| ||||| | ||||| ||||||||||    
T  12668778 tatgatcctacacacttgaacaaatattagcatattaaatcgatcttcaataatttgttatcattaaaaccttagaggaattgtacaaa 12668690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 15650816 - 15650709
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgt 123  Q
    ||||||| | ||||| | |||| |||||||||| || ||| ||||||||||||||| ||||||| ||||| | ||||| ||||||||||   ||||||||    
T  15650816 tatgatcctacacacctgaacaaatattagcatgtccaattgttcttcaatactttattatcatcaaaaccttagaggaattgtacaaa-ccaattttgt 15650718  T
Q  124 tccaacact 132  Q
    |||||||||    
T  15650717 tccaacact 15650709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 17087854 - 17087774
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||| |||||||||||||||||||||  || |||||||||| ||||||| |||| ||||||| | ||||| ||||||||    
T  17087854 tgcacagttaaacatatattagcatatctcattgttcttcaatcctttgttttcatcaaaactttaaaggcactgtacaaa 17087774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 2973498 - 2973421
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    |||||||| | || || ||||||||||||||||||||||||| | ||||  ||||| |||||||||||||||| ||||    
T  2973498 attttaatatttggtcatgcacacttaaacatatattagcattttaaattattctttaatactttgttatcatcaaaa 2973421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 17103125 - 17103012
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| || |||| || | |||||||||||| ||||  ||| | |||| |||| ||||||||||| ||||||||||||| ||||||||||      
T  17103125 attttaatatatggtcctgcatacgtgaacatatattaggatattcaattgctctttaatattttgttatcatcaaaacttcagaggaattgtacaaaac 17103026  T
Q  115 gaattttgttccaa 128  Q
     | |||||||||||    
T  17103025 catttttgttccaa 17103012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 17496391 - 17496277
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||| ||||||||| || || ||| |||| ||||||| ||||| ||| |||||||||||||||||||| || ||||| | ||||  |||| |||||      
T  17496391 attttattctatgatcttggactcttgaacaaatattagtatatccaattgttcttcaatactttgttattatcaaaacattagagaaattgcacaaa-c 17496293  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  17496292 caattttgttccaaca 17496277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 27983302 - 27983379
Alignment:
Q  35 acacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||||||||||||| | |||| |||  ||||| |||| | ||||||||| ||||||| | ||||||||||||||    
T  27983302 acacttaaacatatattaccgtatctaattattctttaatattatgttatcattaaaactttataggcattgtacaaa 27983379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 37283032 - 37282943
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||||| || |||||| |||| ||||||  || || |||  ||||| |||||||||||||||| ||||||| ||||| |||||||||    
T  37283032 tctatgatcttgtacacttgaacaaatattaatatgtctaatttttcttaaatactttgttatcatcaaaactttagaggaattgtacaa 37282943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 43282189 - 43282136
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatc 85  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| |||||||||    
T  43282189 tgcacacttaaacatatattatcatacccaattgttcttcaatattttgttatc 43282136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 10154481 - 10154588
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttc-aatactttgttatcataaaaacttcagaggcattgtacaaattgaattt 120  Q
    ||||||||| ||||||||| |||| ||||||||| ||| ||| | ||||  ||||||  |||||||| ||||||| |||||||||||  ||| | | |||    
T  10154481 tctatgatcctgcacacttgaacaaatattagcaaatccaattgatcttttaatact--gttatcatcaaaacttaagaggcattgtttaaactcatttt 10154578  T
Q  121 tgttccaaca 130  Q
    ||||||||||    
T  10154579 tgttccaaca 10154588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 19018839 - 19018753
Alignment:
Q  26 tgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||| ||||||||| |||| ||||||| ||||  ||| | ||||||||||||| ||||||| ||||||| || || ||||| ||||    
T  19018839 tgatcatgcacacttgaacaaatattagtatattcaattgctcttcaatactttattatcatcaaaactttagtggaattgtgcaaa 19018753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 1616093 - 1616004
Alignment:
Q  23 ctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||| |||  |||| |||| | |||| |||||| ||| ||||||  |||||||||||| || ||||||||||| ||||||| ||||    
T  1616093 ctatgatcctgcttacttgaacacacattaacatatctaattgttcttttatactttgttattatcaaaacttcagatgcattgttcaaa 1616004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 19365768 - 19365703
Alignment:
Q  43 acatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgta 108  Q
    ||||||||||||||||| ||| ||||||||||| | || |||||| ||||||| | |||| |||||    
T  19365768 acatatattagcatatccaatcgttcttcaatagtgtgctatcatcaaaactttataggcgttgta 19365703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 18129730 - 18129686
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatc 59  Q
    |||||| |||||| || |||||||||||||| |||||||||||||    
T  18129730 attttagtctatggtcctgcacacttaaacaaatattagcatatc 18129686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 19337152 - 19337212
Alignment:
Q  34 cacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    ||||||| ||||||||| ||  |||| ||| ||||||||||| ||||||||||| ||||||    
T  19337152 cacacttgaacatatatcagagtatctaattgttcttcaatattttgttatcatcaaaact 19337212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 140 - 27
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||| |||| ||||| ||| ||||||||||| |||||| ||| |||||| |||||||||||||||| |||| || | |||||||| ||||||     
T  140 attttaatctaagatcctgcactcttgaacatatattaacatatctaattgttctttaatactttgttatcatcaaaattttaaaggcattggacaaatc 41  T
Q  115 gaattttgttccaa 128  Q
     |||||||||||||    
T  40 caattttgttccaa 27  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 319146 - 319049
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||| ||||||| ||||||||| |||| |||||| |||||| ||| ||| ||||||||||||||||||| ||||||| | ||||||||||||||    
T  319146 attttaatttatgatcctgcacacttgaacacatattaacatatctaattgtttttcaatactttgttatcatcaaaactttaaaggcattgtacaaa 319049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 35665888 - 35665791
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||||||||||||||| |||||||||||||||| |||||  ||| ||| || |||| || |||||||| ||||||||| ||| ||||||||||    
T  35665888 attttaatctatgatcgtgcatacttaaacatatattaacatattcaattgttttttaatatttcgttatcatcaaaacttcaaaggaattgtacaaa 35665791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 42256589 - 42256674
Alignment:
Q  45 atatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    ||||||||||||||| ||| |||||| |||||||||||||||| ||||||| | ||| | |||||||||| |||||||||||||||    
T  42256589 atatattagcatatccaattgttctttaatactttgttatcatcaaaactttataggtactgtacaaattcaattttgttccaaca 42256674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 18848739 - 18848833
Alignment:
Q  35 acacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    |||||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||  ||||  ||||||||||   |||||||||||||||    
T  18848739 acacttgaacatatattatcatatccaattgttcttcaatactttgttatcataaaaactctagagaaattgtacaaa-ccaattttgttccaaca 18848833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 22311287 - 22311200
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||| ||||||||| |||| ||||||| ||||| ||| ||||||||||||||||||||||| ||||| | ||||| |||||||||    
T  22311287 tatgatcctgcacacttgaacaaatattagtatatccaattgttcttcaatactttgttatcatcaaaaccttagaggaattgtacaa 22311200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 25916281 - 25916196
Alignment:
Q  26 tgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||| |||||||||||||| ||||||| ||||| ||| |||||||||||||||||||| || ||||||| ||||| ||| |||||    
T  25916281 tgatcatgcacacttaaacaaatattagtatatccaattgttcttcaatactttgttatgatcaaaactttagaggaattatacaa 25916196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 15375984 - 15376080
Alignment:
Q  35 acacttaaacatatattagcatatcaaatagttcttc-aatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    ||||||||||||||| ||| ||||| ||| ||||||  |||||||| ||||||| |||||||||||| ||||||||||||  || ||||||||||||    
T  15375984 acacttaaacatatactagtatatccaattgttcttttaatactttattatcatcaaaacttcagagtcattgtacaaatctaactttgttccaaca 15376080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 29410043 - 29410131
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||| | ||||||| |||| ||||||||||||  ||| |||||||||||||||| |||||| |||| |||||||| ||||||||||    
T  29410043 tatgatcttccacactttaacaaatattagcatatttaattgttcttcaatactttgctatcatcaaaatttcagaggaattgtacaaa 29410131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 17568480 - 17568416
Alignment:
Q  66 ttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    ||||||||||||||||||| || ||||||| ||||||||| |||||||| ||||||||| |||||    
T  17568480 ttcttcaatactttgttattatcaaaactttagaggcattatacaaattcaattttgtttcaaca 17568416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 22269067 - 22269158
Alignment:
Q  39 ttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    ||||| ||||||||||||||| | |  ||||||| |||||||||||||| |||| |||| ||  |||||||||||  |||||||||||||||    
T  22269067 ttaaatatatattagcatatccattttttcttcattactttgttatcatcaaaatttcaaagatattgtacaaatctaattttgttccaaca 22269158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 13074093 - 13074203
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcat-aaaaacttcagaggcattgtacaaat 113  Q
    ||||||||||||| |  |||||| ||||||||||||||||||||  ||| ||| || |||||||||||||||| || || || ||||  |||||||||||    
T  13074093 attttaatctatggttatgcacatttaaacatatattagcatattcaattgttttttaatactttgttatcatcaacaattttagagttattgtacaaat 13074192  T
Q  114 tgaattttgtt 124  Q
      |||||||||    
T  13074193 ccaattttgtt 13074203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 21547977 - 21547887
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||| | ||||||| || | ||||||| ||||| ||| |||||||||||||||| |||||| ||||| | ||||| ||||||||||    
T  21547977 tctatgatccttcacacttgaaaaaatattagtatatccaattgttcttcaatactttggtatcatcaaaaccttagaggaattgtacaaa 21547887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 18038712 - 18038792
Alignment:
Q  33 gcacacttaaacatatattagcatatcaaatagttcttc-aatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||||| |||||| ||||||||||| ||| ||||||  ||||| |||||||||| ||||| | ||||||||||||||||    
T  18038712 gcacacttgaacatacattagcatatccaattgttcttttaataccttgttatcattaaaacctaagaggcattgtacaaa 18038792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 23959732 - 23959804
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcat 87  Q
    |||||||| |||| || | ||||||| |||||||||||||||||||| | ||| || ||||||||||||||||    
T  23959732 attttaatatatggtcctccacacttgaacatatattagcatatcaagttgttatttaatactttgttatcat 23959804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 27765391 - 27765297
Alignment:
Q  17 tttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    |||| |||||| || |||||| || ||||||||||| |||||| |||  ||||| |||||||||||||||| ||||  | ||||| |||||||||    
T  27765391 tttattctatggtcctgcacatttgaacatatattaacatatccaattattctttaatactttgttatcatcaaaatcttagaggaattgtacaa 27765297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 24764204 - 24764139
Alignment:
Q  27 gatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    |||| ||||||||| |||| ||||||| ||||| ||  ||||||||||||||||||||||| ||||    
T  24764204 gatcttgcacacttgaacaaatattagtatatccaagtgttcttcaatactttgttatcatcaaaa 24764139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 25348466 - 25348530
Alignment:
Q  27 gatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    |||| ||||||||| ||||||| |||| ||||||| | ||||||||||||||||||||||| ||||    
T  25348466 gatcctgcacacttgaacatatgttagtatatcaatt-gttcttcaatactttgttatcatcaaaa 25348530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 17417165 - 17417077
Alignment:
Q  24 tatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||| | ||||||| |||| |||||||  |  | ||| ||||||||||||||||||||||| ||||||| | ||| ||||||||||    
T  17417165 tatgatcctacacacttgaacaaatattagtttgaccaattgttcttcaatactttgttatcatcaaaactttaaaggaattgtacaaa 17417077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 21585042 - 21585106
Alignment:
Q  48 tattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||| ||||| ||| ||||||||||||||||||||| | ||||| | ||||| ||||||||||    
T  21585042 tattagtatatccaatcgttcttcaatactttgttatcctcaaaaccttagaggaattgtacaaa 21585106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 26654404 - 26654329
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgta 108  Q
    ||||||||| ||||||| ||||  | || ||| ||||||||||||||||||||||| ||||| ||||||| ||||||    
T  26654404 tgcacacttgaacatatgttagtct-tccaattgttcttcaatactttgttatcatcaaaacctcagaggaattgta 26654329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 16197183 - 16197129
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcat 87  Q
    ||||||||| |||||||||||| ||||| ||| |||||||||||| ||||||||||    
T  16197183 tgcacacttgaacatatattagtatatc-aattgttcttcaataccttgttatcat 16197129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 16586672 - 16586558
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    |||||||| |||| || |||| | || |||||||||||||||||  |||  || || |||||||||||||||| ||||  | ||||| |||||| ||| |    
T  16586672 attttaatttatggtcctgcaaatttgaacatatattagcatattcaattcttttttaatactttgttatcatcaaaatcttagaggaattgtataaa-t 16586574  T
Q  115 gaattttgttccaaca 130  Q
     |||||||||||||||    
T  16586573 caattttgttccaaca 16586558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 17569293 - 17569250
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatat 58  Q
    ||||||||||||| || | |||||||||||||||||||||||||    
T  17569293 attttaatctatggtcatacacacttaaacatatattagcatat 17569250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 26652861 - 26652807
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcat 87  Q
    ||||||||||||||||| |||| || || ||| |||||||||||||||||||||||    
T  26652861 tgcacacttaaacatatgttagtat-tccaattgttcttcaatactttgttatcat 26652807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 19565064 - 19565121
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatacttt 79  Q
    ||||||||| ||||||||| |||| ||||||| || || ||| |||||||||||||||    
T  19565064 tctatgatcctgcacactttaacaaatattagtatgtccaattgttcttcaatacttt 19565121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 27483879 - 27483803
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgta 108  Q
    ||||||||| |||| | ||||  ||||||||| ||||||  | |||||||||| || |||||||||||| |||||||    
T  27483879 tgcacacttgaacacacattaatatatcaaattgttctttcaaactttgttatgatcaaaacttcagagacattgta 27483803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 33705778 - 33705734
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatc 59  Q
    |||||| ||||||||| || ||||||||||| |||||||||||||    
T  33705778 attttagtctatgatcctgaacacttaaacaaatattagcatatc 33705734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 26335281 - 26335193
Alignment:
Q  42 aacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaattgaattttgttccaaca 130  Q
    |||||||||||| ||||| ||| |||||| |||| ||||||||||| ||||||| | |||||||||| ||||  |||||||||||||||    
T  26335281 aacatatattagtatatccaattgttctttaataatttgttatcatcaaaactttataggcattgtataaatccaattttgttccaaca 26335193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 24492145 - 24492067
Alignment:
Q  34 cacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||| |||| ||||||| ||||| ||| ||||||||||||||||||||||| ||||| | ||||| ||||||||||    
T  24492145 cacacttgaacaaatattagtatatccaattgttcttcaatactttgttatcatcaaaaccttagaggaattgtacaaa 24492067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 16182670 - 16182732
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    ||||||||| |||||||||||||| ||| |||  ||||| |||||||||||||||| ||||||    
T  16182670 tgcacactttaacatatattagcacatccaattattctttaatactttgttatcatcaaaact 16182732  T

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Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 18821095 - 18821173
Alignment:
Q  27 gatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcatt 105  Q
    |||| ||||||||| |||| ||||||| |||| |||| ||||||  ||||||| || |||| |||||||||||||||||    
T  18821095 gatcatgcacacttgaacacatattagtatataaaattgttctttcatactttattgtcatcaaaacttcagaggcatt 18821173  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 24838070 - 24837956
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcat-aaaaacttcagaggcattgtacaaat 113  Q
    ||||||||||  |||| ||||||||| | ||||||||| |||||| ||| | | || |||||||||||||||| |||||||| ||||| | ||||||||     
T  24838070 attttaatcttcgatcatgcacacttgatcatatattaacatatccaattgatgtttaatactttgttatcatcaaaaactt-agaggaaatgtacaaac 24837972  T
Q  114 tgaattttgttccaaca 130  Q
    | |||||||||| ||||    
T  24837971 t-aattttgttctaaca 24837956  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 17337794 - 17337751
Alignment:
Q  16 ttttaatctatgatcgtgcacacttaaacatatattagcatatc 59  Q
    ||||||| |||| || ||||||||||||||||||||||||||||    
T  17337794 ttttaatttatggtcttgcacacttaaacatatattagcatatc 17337751  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 9824664 - 9824724
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    ||||||||| ||||||| |||| || |||| | ||||||||||||||||||||||| |||||    
T  9824664 tgcacacttgaacatatgttagtatttcaatt-gttcttcaatactttgttatcatcaaaac 9824724  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 20237191 - 20237110
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttc-ttcaatactttgttatcataaaaactt 95  Q
    |||||| ||||||||| ||||||||| |||| ||||||||||||| ||| |  | || ||||| |||||||||| |||||||    
T  20237191 attttagtctatgatcttgcacacttgaacaaatattagcatatccaattgaacttttaataccttgttatcatcaaaactt 20237110  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 25570139 - 25570199
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaac 93  Q
    ||||||||| ||||||| |||| | ||| ||| ||||||||||||||||||||||| |||||    
T  25570139 tgcacacttgaacatatgttagta-atccaattgttcttcaatactttgttatcatcaaaac 25570199  T

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Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 20690441 - 20690557
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaatt 114  Q
    ||||||||||||  |  |||| ||||||| || |||||||||||| ||| ||| || |||| |||||| |||| ||||||| |||  ||||| |||||||    
T  20690441 attttaatctatagtattgcatacttaaatatgtattagcatatccaattgttttttaatattttgttctcatcaaaactttagaaacattgcacaaatt 20690540  T
Q  115 gaattttgttccaacac 131  Q
      |||||| ||| ||||    
T  20690541 tcattttggtccgacac 20690557  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 22186404 - 22186484
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||| ||||||||| | ||||||||||  ||| ||| ||   || ||||||||||| |||| |||||||||||||||||||    
T  22186404 tgcatacttaaacacacattagcatattcaattgttatttcttattttgttatcatcaaaatttcagaggcattgtacaaa 22186484  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 24884948 - 24884889
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaa 92  Q
    ||||||||| ||||||| |||| ||||||| || ||||| |||||||||||||||| ||||    
T  24884948 tgcacacttgaacatatgttagtatatcaatta-ttctttaatactttgttatcatcaaaa 24884889  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 38402795 - 38402755
Alignment:
Q  282 aaccaattctcaacctaaccagctacaaacactataccaca 322  Q
    ||||||||||||||||||| | ||||||||| |||||||||    
T  38402795 aaccaattctcaacctaacaacctacaaacattataccaca 38402755  T

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Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 28290 - 28380
Alignment:
Q  22 tctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    ||||||||| ||||| ||| |||| ||||||| ||||| ||| | ||||||||| ||||||||||| ||||| | ||||| ||||||||||    
T  28290 tctatgatcctgcactcttgaacaaatattagtatatccaattgatcttcaatattttgttatcatcaaaaccttagaggaattgtacaaa 28380  T

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Target: scaffold0329 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 4662 - 4759
Alignment:
Q  15 attttaatctatgatcgtgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaaa 112  Q
    |||||| | |||| || ||||||||| || ||||||||||||||| ||| ||| || | ||| ||| |||||| ||||||| ||||| ||||||||||    
T  4662 attttagtatatggtcctgcacacttgaaaatatattagcatatccaattgttttttactaccttgatatcatcaaaactttagaggtattgtacaaa 4759  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 5467 - 5545
Alignment:
Q  32 tgcacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaacttcagaggcattgtacaa 111  Q
    ||||||||| ||||||||||| |||||  ||| ||| || |||||||||||||||| ||||||  ||||| |||||||||    
T  5467 tgcacacttgaacatatattaacatatgcaattgttttt-aatactttgttatcatcaaaactctagaggaattgtacaa 5545  T

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Target: scaffold0402 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 209 - 269
Alignment:
Q  34 cacacttaaacatatattagcatatcaaatagttcttcaatactttgttatcataaaaact 94  Q
    ||||||| ||||||||| ||  |||| ||| ||||||||||| ||||||||||| ||||||    
T  209 cacacttgaacatatatcagagtatctaattgttcttcaatattttgttatcatcaaaact 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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