View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14429_high_6 (Length: 440)
Name: NF14429_high_6
Description: NF14429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14429_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 8 - 421
Target Start/End: Complemental strand, 44240901 - 44240488
Alignment:
| Q |
8 |
agataatactgaaacggaattcacacacgcggatcggaccgacgagtcggtatcacgaagccgtcgaattacgttggcgaggatcttcgacaggtaagga |
107 |
Q |
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| T |
44240901 |
agataatgctgaaacggaattcacacacgcggatcggaccgacgagtcggtatcacgaagccgtcgaattacgttggcgaggatcttcgacaggtaagga |
44240802 |
T |
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| Q |
108 |
gaaagcgtgttaccgtgagtttcggagagtaatccgaaaagctgaacgcattgcttccgtaccggagatttatcggaagcgtcggtggagtacatgcaag |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44240801 |
gaaagcgtgttaccgtgagtttcggagagtaatccgaaaagctggacgcattgcttccgtaccggagatttatcggaagcgtcggtggagtacatgcaag |
44240702 |
T |
|
| Q |
208 |
agaggaaaaccggtacggtggttgtgtcgaggttacgtgcaattgtgatgagttctgttgcggcgagggagtgagtgtcgcggtcggagagtttggttag |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44240701 |
agaggaaaaccggtacggtggttgtgtcgaggttacgtgcaattgtgatgagttctgttgcggcgagggagtgagtgtcgcggtcggagagtttggttag |
44240602 |
T |
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| Q |
308 |
acatgtgaataccttttgttttacgttctgcggtgacgacattgtggttgtgttggtgccagagttggtagttacagtggtggagtgtttatgattgcgg |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
44240601 |
acatgtgaataccttttgttttacgttctgcggtgacgacattgtggttgtgttggtgccggagttggtagttacagtggtggagtgtttatgattgcgg |
44240502 |
T |
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| Q |
408 |
tggtggatcgggag |
421 |
Q |
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|||||||||||||| |
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| T |
44240501 |
tggtggatcgggag |
44240488 |
T |
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