View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1442R-Insertion-9 (Length: 601)

Name: NF1442R-Insertion-9
Description: NF1442R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1442R-Insertion-9
NF1442R-Insertion-9
[»] chr1 (4 HSPs)
chr1 (9-597)||(5053662-5054251)
chr1 (11-122)||(46446033-46446147)
chr1 (9-122)||(46672020-46672136)
chr1 (159-188)||(46446193-46446222)
[»] chr8 (8 HSPs)
chr8 (9-134)||(9860662-9860787)
chr8 (155-282)||(9860829-9860956)
chr8 (155-282)||(9842188-9842315)
chr8 (9-123)||(9842021-9842135)
chr8 (160-282)||(9903122-9903244)
chr8 (24-123)||(9847066-9847165)
chr8 (21-62)||(27361021-27361062)
chr8 (336-394)||(27361397-27361459)
[»] chr5 (9 HSPs)
chr5 (155-283)||(39576559-39576687)
chr5 (9-123)||(225388-225502)
chr5 (9-116)||(39572392-39572499)
chr5 (9-135)||(4146547-4146673)
chr5 (11-116)||(39576400-39576505)
chr5 (9-46)||(4100463-4100500)
chr5 (9-69)||(2326337-2326397)
chr5 (160-210)||(3561339-3561389)
chr5 (160-208)||(225560-225608)
[»] chr3 (1 HSPs)
chr3 (155-256)||(7257009-7257110)
[»] chr6 (2 HSPs)
chr6 (167-291)||(112355-112479)
chr6 (9-49)||(112636-112676)
[»] scaffold0658 (2 HSPs)
scaffold0658 (21-62)||(2835-2876)
scaffold0658 (336-394)||(2438-2500)


Alignment Details
Target: chr1 (Bit Score: 502; Significance: 0; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 9 - 597
Target Start/End: Complemental strand, 5054251 - 5053662
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  5054251 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcatgagcttgatactttgtatgtggtatttcgtttgtggatcaac 5054152  T
Q  109 gatcaaatcatctttaaagtatctctacttggaagagacatcaaacacatacattttggttacaatgtcaagaccaaacatttgacaaagattgagggca 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5054151 gatcaaatcatctttaaagtatctctacttggaagagacatcaaacacatacattttggttacaatgtcaagaccaaacatttgacaaagatcgagggca 5054052  T
Q  209 ttaccatgggcaattttgaggtatggcctcacgttaacagtttagtttcatttccaagtactccgacatagctagatttcctggtattacttatatttgt 308  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5054051 ttaccatgggcaattttgaggtatggcctcacgtcaacagtttagtttcatttccaagtactccgacatagctaggtttcctggtattacttatatttgt 5053952  T
Q  309 cttagttaggcataacaattaaacaattatttatgtttctatttaattattta-gattgatatggccaaataaaaggtgaagttttatgcataaagggtt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  5053951 cttagttaggcataacaattaaacaattatttatgtttctatttaattatttacgattgatatggccaaataaaaggtgaagttttatgcttaaagggtt 5053852  T
Q  408 tgacttaattaatttatttacccaaatttgatttgaaaacacttggtgaatgtctgctaattatttatacaaattttgtctcttgaccccttaatgatga 507  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||    
T  5053851 tgacttaattaatttatttatccaaatttgatttggaaacacttggtgaatgtctgctaattatttatacagtttttg--tcttgaccccttaatgatga 5053754  T
Q  508 tcacgcacgaagcagttgtagttttgaattaaattataagctcacttttcatgccattgactgtg--ctttgtaacttattgtcttgttaat 597  Q
    |||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||||||    
T  5053753 tcacacacgaagcagatgtagttttgaattgaattataagctcatttttcatgccattgactgtgttctttgtaacttattgtctcgttaat 5053662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 46446033 - 46446147
Alignment:
Q  11 aatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtat---gtggtatttcgtttgtggatcaa 107  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||| || |||| ||||||| ||| ||||| |   |||||||||||||| ||| ||||    
T  46446033 aatggtctctttatcatgagatgggacattttgattatgtggctgcctgtggtcatgagcttaataatttgtcttcggtggtatttcgtttttgggtcaa 46446132  T
Q  108 cgatcaaatcatctt 122  Q
    |||||||||||||||    
T  46446133 cgatcaaatcatctt 46446147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 46672136 - 46672020
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgc---ggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatc 105  Q
    |||||||||||  ||||||| |||||||| |||||||||||| ||||||||    |||| | ||||||| ||||| |   |||||||| | |||||||||    
T  46672136 aaaatggtctctctatcatgcgatgggacattttgattatgtggctgcttgttgtggtcataagcttgaaattttttcgttggtattttgcttgtggatc 46672037  T
Q  106 aacgatcaaatcatctt 122  Q
    |||||| |||| |||||    
T  46672036 aacgattaaattatctt 46672020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 188
Target Start/End: Original strand, 46446193 - 46446222
Alignment:
Q  159 acattttggttacaatgtcaagaccaaaca 188  Q
    ||||||||||||||||||||||||||||||    
T  46446193 acattttggttacaatgtcaagaccaaaca 46446222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 9860662 - 9860787
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaac 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||  |||||| | ||||||| ||||| |||||||||||||||||||    
T  9860662 aaaatggtctctttatcatgagatgggaccttttgattatgtgtctgcttgtggtcaagagcttcagattttgtttgtggcatttcgtttgtggatcaac 9860761  T
Q  109 gatcaaatcatctttaaagtatctct 134  Q
     ||||||| |||||||||||| ||||    
T  9860762 catcaaattatctttaaagtagctct 9860787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 9860829 - 9860956
Alignment:
Q  155 acatacattttggttacaatgtcaagaccaaacatttgacaaagattgagggcattaccatgggcaattttgaggtatggcctcacgttaacagtttagt 254  Q
    |||| |||||||||||||||||||| || | ||| ||||||| ||| |||||||||    ||||  |||||||||||||| ||||| |||||||||||||    
T  9860829 acattcattttggttacaatgtcaaaactagacaattgacaatgatcgagggcattgatgtgggtgattttgaggtatggtctcacattaacagtttagt 9860928  T
Q  255 ttcatttccaagtactccgacatagcta 282  Q
    |||||| ||| |||||||  ||||||||    
T  9860929 ttcattgccatgtactccagcatagcta 9860956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 9842188 - 9842315
Alignment:
Q  155 acatacattttggttacaatgtcaagaccaaacatttgacaaagattgagggcattaccatgggcaattttgaggtatggcctcacgttaacagtttagt 254  Q
    |||||||||||||||||||||| |||||||  || |||||||||||||||| ||||  | | ||||| ||||| ||||| | ||||  ||||||| ||||    
T  9842188 acatacattttggttacaatgtgaagaccaggcaattgacaaagattgaggacattgacgttggcaactttgaagtatgtcttcacactaacagtctagt 9842287  T
Q  255 ttcatttccaagtactccgacatagcta 282  Q
    |||||| ||| |||||||  ||||||||    
T  9842288 ttcattgccaggtactcctgcatagcta 9842315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 9842021 - 9842135
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaac 108  Q
    ||||||||||| | ||||||||||||||||||||||||||||  ||||||| |||| |  |||| ||| |  | |||||   ||||||||||||||||||    
T  9842021 aaaatggtctcttcatcatgagatgggaccttttgattatgtgtctgcttgtggtcataggcttaatactacggatgtgaagtttcgtttgtggatcaac 9842120  T
Q  109 gatcaaatcatcttt 123  Q
    |||||||| ||||||    
T  9842121 gatcaaattatcttt 9842135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 9903122 - 9903244
Alignment:
Q  160 cattttggttacaatgtcaagaccaaacatttgacaaagattgagggcattaccatgggcaattttgaggtatggcctcacgttaacagtttagtttcat 259  Q
    |||||| |||||||||| ||||||||||| |||| ||||||||||| ||||  | ||||  ||||| | ||||||  ||||  ||||||| |||||||||    
T  9903122 catttttgttacaatgtgaagaccaaacaattgataaagattgaggacattgacgtgggagattttaaagtatggtttcacactaacagtctagtttcat 9903221  T
Q  260 ttccaagtactccgacatagcta 282  Q
    |  ||||||||||  ||||||||    
T  9903222 tgtcaagtactccaccatagcta 9903244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 9847066 - 9847165
Alignment:
Q  24 tcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaacgatcaaatcatcttt 123  Q
    ||||||||||| |||||||| || | | | |||||| |||| ||   |||||||| ||  ||||||||||||||| |||||||| |||||||| ||||||    
T  9847066 tcatgagatggaaccttttgtttgtatgggtgcttgtggtcctggtattgatattatgagtgtggtatttcgtttttggatcaatgatcaaattatcttt 9847165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 27361021 - 27361062
Alignment:
Q  21 ttatcatgagatgggaccttttgattatgttgctgcttgcgg 62  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  27361021 ttatcatgagatgggaccttttgattacgaggctgcttgcgg 27361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 394
Target Start/End: Original strand, 27361397 - 27361459
Alignment:
Q  336 tatttatgtttctatttaattatt---tagattgat-atggccaaataaaaggtgaagtttta 394  Q
    |||||||||||||||||||||||    ||||||||  ||||||||| ||||||||||||||||    
T  27361397 tatttatgtttctatttaattatcatctagattgaccatggccaaacaaaaggtgaagtttta 27361459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 5e-33; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 39576559 - 39576687
Alignment:
Q  155 acatacattttggttacaatgtcaagaccaaacatttgacaaagattgagggcattaccatgggcaattttgaggtatggcctcacgttaacagtttagt 254  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||  |||  ||||||| ||||||| ||||  ||||||| |  |    
T  39576559 acatacattttagttacaatgtcaagaccaaacaattgacaaagattgagggcattgcctcgggtgattttgaagtatggcttcacactaacagtctttt 39576658  T
Q  255 ttcatttccaagtactccgacatagctag 283  Q
    |||||||||||||||||||||||||||||    
T  39576659 ttcatttccaagtactccgacatagctag 39576687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 225388 - 225502
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaac 108  Q
    ||||||||||| ||||||||||||  ||||||||| |||||| |||| ||||||||||| ||||  |||||| | ||||| |||||||||||||||||||    
T  225388 aaaatggtctctttatcatgagatctgaccttttggttatgtggctgtttgcggtcgtgggcttagtattttttgtgtggcatttcgtttgtggatcaac 225487  T
Q  109 gatcaaatcatcttt 123  Q
    |||||||||||||||    
T  225488 gatcaaatcatcttt 225502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 39572392 - 39572499
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaac 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    ||||||||||| ||  || | ||||| || | |||||||||    
T  39572392 aaaatggtctccttatcatgagatgggaccttttgattatgttgctgcttgtggtaaccagcttgatattatgattgagatattttgtctatggatcaac 39572491  T
Q  109 gatcaaat 116  Q
    ||||||||    
T  39572492 gatcaaat 39572499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 4146547 - 4146673
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaac 108  Q
    ||||||||||| |||||||||||||||||||||||||| |    |||||||||| | |||| || ||||| ||| |||||| ||| |||| |||||||||    
T  4146547 aaaatggtctctttatcatgagatgggaccttttgattttccgactgcttgcggccatgagattcatattctgtgtgtggtgttttgtttctggatcaac 4146646  T
Q  109 gatcaaatcatctttaaagtatctcta 135  Q
     ||||||| ||| ||  ||||||||||    
T  4146647 catcaaattatccttcgagtatctcta 4146673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 39576400 - 39576505
Alignment:
Q  11 aatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgagcttgatattttgtatgtggtatttcgtttgtggatcaacga 110  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||| | |||    ||||| ||||| ||  || | ||||||||||||||||||||||    
T  39576400 aatggtctctttatcatgagatgggacctttcaattatgttgctgctagtggtaaccagcttaatattatgagtgcgatatttcgtttgtggatcaacga 39576499  T
Q  111 tcaaat 116  Q
    ||||||    
T  39576500 tcaaat 39576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 4100500 - 4100463
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgatt 46  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4100500 aaaatggtctctttatcatgagatgggaccttttgatt 4100463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 2326397 - 2326337
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatgttgctgcttgcggtcgtgag 69  Q
    ||||| ||||| |||||||||||||||||| ||||||||||| ||| |||| |||| ||||    
T  2326397 aaaattgtctctttatcatgagatgggaccatttgattatgtggctacttgtggtcatgag 2326337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 3561389 - 3561339
Alignment:
Q  160 cattttggttacaatgtcaagaccaaacatttgacaaagattgagggcatt 210  Q
    ||||||||||||||||||||||| | ||  ||||||||||| |||||||||    
T  3561389 cattttggttacaatgtcaagactagacgattgacaaagatagagggcatt 3561339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 225560 - 225608
Alignment:
Q  160 cattttggttacaatgtcaagaccaaacatttgacaaagattgagggca 208  Q
    |||||| |||||||||||||||| | |||  ||||||||||||||||||    
T  225560 cattttagttacaatgtcaagactagacaactgacaaagattgagggca 225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 7257009 - 7257110
Alignment:
Q  155 acatacattttggttacaatgtcaagaccaaacatttgacaaagattgagggcattaccatgggcaattttgaggtatggcctcacgttaacagtttagt 254  Q
    ||||| |||||||||| ||||| |||||||  || ||||| |||||||||| ||||   |||||||||||||| |||||| |||||  ||||||| ||||    
T  7257009 acatatattttggttataatgtgaagaccaggcaattgactaagattgaggacattggaatgggcaattttgaagtatggtctcacactaacagtctagt 7257108  T
Q  255 tt 256  Q
    ||    
T  7257109 tt 7257110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 112479 - 112355
Alignment:
Q  167 gttacaatgtcaagaccaaacatttgacaaagattgagggcattaccatgggcaattttgaggtatggcctcacgttaacagtttagtttcatttccaag 266  Q
    |||||||||||||||| | |||  ||||||||||||| | |||||   ||||| ||||||| | ||||| |||    || | | |||||||||| |||||    
T  112479 gttacaatgtcaagactagacaactgacaaagattgatgacattatagtgggccattttgaagcatggcttcatacaaatactctagtttcattgccaag 112380  T
Q  267 tactccgacatagctagatttcctg 291  Q
    |||||| |||||||||| |||||||    
T  112379 tactccaacatagctaggtttcctg 112355  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 112676 - 112636
Alignment:
Q  9 aaaatggtctcattatcatgagatgggaccttttgattatg 49  Q
    ||||||| ||| ||||||||||||||| |||||||||||||    
T  112676 aaaatggactctttatcatgagatggggccttttgattatg 112636  T

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Target: scaffold0658 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 2876 - 2835
Alignment:
Q  21 ttatcatgagatgggaccttttgattatgttgctgcttgcgg 62  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  2876 ttatcatgagatgggaccttttgattacgaggctgcttgcgg 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 2500 - 2438
Alignment:
Q  336 tatttatgtttctatttaattatt---tagattgat-atggccaaataaaaggtgaagtttta 394  Q
    |||||||||||||||||||||||    ||||||||  ||||||||| ||||||||||||||||    
T  2500 tatttatgtttctatttaattatcatctagattgaccatggccaaacaaaaggtgaagtttta 2438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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