View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14430_high_4 (Length: 229)
Name: NF14430_high_4
Description: NF14430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14430_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 3915748 - 3915945
Alignment:
| Q |
14 |
aatatctataaacacgttctatataatgtgatgttgatttctagactaaatttgtatcaatttttcttaaaataaataaacttgaaaaaatttatttcaa |
113 |
Q |
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| T |
3915748 |
aatatctataaacacgttctgtataatgtgatgttgatttctagactaaatttgtatcaatttttcttaaaataaataaacttgaaaaaatttatttcaa |
3915847 |
T |
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| Q |
114 |
tcatagcatataacaatgatatgcatggaacaaggatacaaatacatgccacaaattaaaaatctaagtaaggcacacaactatagtggaggcctatt |
211 |
Q |
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| T |
3915848 |
tcatagcatataacaatgatatgcatggaacaaggatacaaatacatgccacaaattaaaaatctaagtaaggcacacaactatagtggaggcctatt |
3915945 |
T |
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