View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14431_low_7 (Length: 339)
Name: NF14431_low_7
Description: NF14431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14431_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 36886684 - 36886373
Alignment:
| Q |
11 |
gagtgagatgaaatgaaattgaatatttaaggactgagttatatacaacatgcaagtatatttctaaggatcagaataccagttgattagttatgttcat |
110 |
Q |
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| T |
36886684 |
gagtgaaatgaaatgaaattgaatatttaaggactgagttatatacaacatgcaagtatatttctaaggatcagaataccagttgattagttatgttcat |
36886585 |
T |
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| Q |
111 |
attgattttagaccaagcttaatagacatgataataatacagagcaacagctaaagccnnnnnnnactagcagggttgactactgtatctcatgatgcca |
210 |
Q |
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| T |
36886584 |
attgattttagaccaagcttaatagacatgataataatacagagcaacagctaaagcctttttttactagtagggttgactactgtatctcatgatgcca |
36886485 |
T |
|
| Q |
211 |
taatgtctttatcagttgaaaataaaatgtttacattttttcgtctcttttgagcatatgatatattataatgattaggcgctttactagtagctgtgca |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36886484 |
taatgtctttatcagttgaaaataaaatgtttacattttttcatctcttttgagcatatgatatattataatgattgggcgctttactagtagctgtgca |
36886385 |
T |
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| Q |
311 |
agtacaatcatc |
322 |
Q |
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|||||||||||| |
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| T |
36886384 |
agtacaatcatc |
36886373 |
T |
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