View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14432_high_8 (Length: 278)
Name: NF14432_high_8
Description: NF14432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14432_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 39298340 - 39298082
Alignment:
| Q |
1 |
tggtgataaaatgaagaaaccatttgaaaacatgacaagttcaggtcaagtacaaggaggaagtgataaaccattaggaggaagtgatgtattgggagct |
100 |
Q |
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| T |
39298340 |
tggtgataaaatgaagaaaccatttgaaaacatgacaagtacaggtcaagtacaaggaggaagtgataaaccattaggaggaagtgatgtattgggagct |
39298241 |
T |
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| Q |
101 |
gtgactgaaactgtgagtgatattggaaataacatggttaaagcaacagataatagtaaagttaatctttctcaagagggacaaggtggtggtgttttgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
39298240 |
gtgactgaaactgtgagtgatattggaaataacatggttaaagcaacagataatagtaaagttaatatttctcaagagggacaaggtggtggtgttttgg |
39298141 |
T |
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| Q |
201 |
atgctattggtgaaaccatagctgaaattgcacatacaactaaagtcattgttgttggt |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39298140 |
atgctattggtgaaaccatagctgaaattgcacatacaactaaagtcattgttgttggt |
39298082 |
T |
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