View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14432_low_5 (Length: 499)

Name: NF14432_low_5
Description: NF14432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14432_low_5
NF14432_low_5
[»] chr1 (25 HSPs)
chr1 (251-474)||(48594166-48594388)
chr1 (251-474)||(48598777-48598999)
chr1 (264-474)||(48589092-48589305)
chr1 (251-359)||(2820957-2821065)
chr1 (251-358)||(12800411-12800518)
chr1 (251-358)||(28371644-28371751)
chr1 (251-358)||(2821430-2821537)
chr1 (251-356)||(48153100-48153205)
chr1 (251-359)||(33631031-33631139)
chr1 (251-358)||(43756288-43756395)
chr1 (259-359)||(50164236-50164336)
chr1 (251-358)||(12799989-12800096)
chr1 (251-358)||(50164650-50164757)
chr1 (251-359)||(38328827-38328935)
chr1 (251-359)||(28371198-28371306)
chr1 (259-358)||(43755849-43755948)
chr1 (251-361)||(38469226-38469336)
chr1 (251-360)||(38468904-38469013)
chr1 (295-360)||(17151864-17151929)
chr1 (292-360)||(33630475-33630543)
chr1 (251-330)||(38328415-38328494)
chr1 (298-359)||(17151001-17151062)
chr1 (296-331)||(32537672-32537707)
chr1 (296-358)||(32538488-32538550)
chr1 (303-332)||(45065378-45065407)
[»] chr6 (17 HSPs)
chr6 (251-361)||(28983233-28983343)
chr6 (251-360)||(34717696-34717805)
chr6 (251-358)||(19062764-19062871)
chr6 (251-359)||(34717241-34717349)
chr6 (251-360)||(7635576-7635685)
chr6 (251-358)||(28982782-28982888)
chr6 (251-359)||(7635123-7635231)
chr6 (251-358)||(18290436-18290543)
chr6 (259-352)||(28535412-28535506)
chr6 (251-359)||(18290214-18290322)
chr6 (290-359)||(2924952-2925021)
chr6 (251-359)||(4348846-4348954)
chr6 (259-331)||(12999426-12999498)
chr6 (295-332)||(10608304-10608341)
chr6 (313-357)||(14496445-14496489)
chr6 (295-332)||(930950-930988)
chr6 (296-352)||(18605845-18605901)
[»] chr7 (23 HSPs)
chr7 (251-359)||(20559745-20559853)
chr7 (251-359)||(20560222-20560330)
chr7 (251-358)||(33139774-33139881)
chr7 (251-358)||(33140235-33140342)
chr7 (251-359)||(42901077-42901185)
chr7 (251-358)||(4179637-4179744)
chr7 (251-359)||(4180279-4180387)
chr7 (251-360)||(30414179-30414288)
chr7 (251-358)||(40641111-40641218)
chr7 (263-358)||(42900647-42900742)
chr7 (251-360)||(25137410-25137519)
chr7 (251-358)||(40640653-40640757)
chr7 (251-358)||(25137865-25137973)
chr7 (264-320)||(35211940-35211996)
chr7 (297-358)||(33686926-33686987)
chr7 (295-332)||(29006374-29006411)
chr7 (295-332)||(29007183-29007220)
chr7 (296-333)||(41224828-41224865)
chr7 (296-359)||(33687735-33687798)
chr7 (288-361)||(42607078-42607151)
chr7 (298-331)||(35613231-35613264)
chr7 (295-332)||(44896073-44896110)
chr7 (296-332)||(29314608-29314644)
[»] chr3 (30 HSPs)
chr3 (251-358)||(930374-930481)
chr3 (251-359)||(11442096-11442204)
chr3 (251-358)||(21166097-21166204)
chr3 (251-358)||(32473761-32473868)
chr3 (251-357)||(42257215-42257321)
chr3 (251-359)||(929910-930018)
chr3 (251-359)||(32474403-32474511)
chr3 (251-360)||(43521075-43521181)
chr3 (251-352)||(38000233-38000334)
chr3 (251-361)||(26006719-26006829)
chr3 (251-359)||(5113197-5113305)
chr3 (251-343)||(11441664-11441756)
chr3 (251-358)||(20586525-20586632)
chr3 (251-358)||(24394675-24394782)
chr3 (262-357)||(50766631-50766725)
chr3 (251-361)||(5113649-5113759)
chr3 (251-360)||(36992114-36992223)
chr3 (251-360)||(37017554-37017663)
chr3 (259-360)||(14788549-14788650)
chr3 (251-358)||(20586072-20586179)
chr3 (251-331)||(45000768-45000848)
chr3 (252-360)||(14788272-14788380)
chr3 (251-358)||(24394247-24394354)
chr3 (251-357)||(45000316-45000422)
chr3 (251-358)||(26006146-26006253)
chr3 (251-332)||(42258003-42258083)
chr3 (259-359)||(43104726-43104826)
chr3 (309-360)||(50836214-50836265)
chr3 (309-360)||(50839588-50839639)
chr3 (317-354)||(24181950-24181987)
[»] chr8 (14 HSPs)
chr8 (251-361)||(14197656-14197766)
chr8 (251-358)||(37657847-37657954)
chr8 (251-356)||(39439760-39439865)
chr8 (251-358)||(30846016-30846123)
chr8 (251-358)||(41714603-41714710)
chr8 (251-359)||(30846437-30846545)
chr8 (251-356)||(39440540-39440644)
chr8 (299-358)||(31408164-31408223)
chr8 (251-315)||(41715208-41715272)
chr8 (292-336)||(42573602-42573646)
chr8 (262-315)||(37658496-37658549)
chr8 (295-332)||(35759223-35759260)
chr8 (295-332)||(41348171-41348208)
chr8 (296-332)||(41092199-41092235)
[»] chr5 (17 HSPs)
chr5 (251-358)||(5620810-5620917)
chr5 (12-161)||(34598892-34599039)
chr5 (251-360)||(12330603-12330712)
chr5 (251-359)||(3595776-3595884)
chr5 (251-358)||(8321328-8321435)
chr5 (251-361)||(42655681-42655791)
chr5 (259-359)||(7858326-7858426)
chr5 (251-358)||(12330148-12330255)
chr5 (251-339)||(16996970-16997058)
chr5 (251-358)||(8320875-8320982)
chr5 (251-358)||(24027187-24027294)
chr5 (251-331)||(24027627-24027707)
chr5 (251-358)||(29759597-29759704)
chr5 (251-357)||(3596234-3596340)
chr5 (251-360)||(7858760-7858869)
chr5 (294-359)||(31078455-31078520)
chr5 (301-359)||(36912245-36912302)
[»] chr4 (22 HSPs)
chr4 (251-358)||(19860330-19860437)
chr4 (251-359)||(19860813-19860921)
chr4 (251-359)||(20174969-20175077)
chr4 (251-359)||(5235373-5235481)
chr4 (251-359)||(6934443-6934551)
chr4 (251-359)||(6933820-6933928)
chr4 (251-356)||(52532125-52532230)
chr4 (259-359)||(52532379-52532479)
chr4 (251-359)||(5235827-5235935)
chr4 (251-359)||(5259269-5259377)
chr4 (251-361)||(30213856-30213966)
chr4 (292-332)||(46764279-46764319)
chr4 (295-332)||(11680303-11680340)
chr4 (295-332)||(11688582-11688619)
chr4 (295-332)||(25655623-25655660)
chr4 (292-332)||(31910581-31910621)
chr4 (295-337)||(12590187-12590229)
chr4 (251-306)||(20175366-20175421)
chr4 (296-358)||(3167463-3167525)
chr4 (296-352)||(39412771-39412827)
chr4 (288-332)||(3847913-3847957)
chr4 (296-359)||(39413607-39413670)
[»] chr2 (18 HSPs)
chr2 (251-358)||(3705337-3705444)
chr2 (251-358)||(16681566-16681673)
chr2 (251-360)||(3705765-3705876)
chr2 (251-358)||(30899390-30899497)
chr2 (251-359)||(15561981-15562089)
chr2 (251-359)||(16903838-16903946)
chr2 (251-359)||(16992332-16992441)
chr2 (251-358)||(6609984-6610091)
chr2 (259-358)||(7994522-7994621)
chr2 (251-359)||(15561540-15561648)
chr2 (259-359)||(37996532-37996632)
chr2 (251-331)||(7994082-7994162)
chr2 (251-357)||(6609552-6609658)
chr2 (251-331)||(16903425-16903504)
chr2 (259-358)||(30899850-30899949)
chr2 (259-332)||(16682215-16682288)
chr2 (295-359)||(34617652-34617716)
chr2 (296-332)||(40992249-40992285)
[»] scaffold0508 (2 HSPs)
scaffold0508 (251-361)||(4130-4240)
scaffold0508 (251-358)||(4565-4672)
[»] scaffold0022 (2 HSPs)
scaffold0022 (251-359)||(61573-61681)
scaffold0022 (251-312)||(62028-62089)
[»] scaffold0006 (1 HSPs)
scaffold0006 (251-331)||(202224-202304)
[»] scaffold0095 (1 HSPs)
scaffold0095 (251-356)||(42873-42977)
[»] scaffold0136 (1 HSPs)
scaffold0136 (287-361)||(22203-22278)
[»] scaffold0189 (1 HSPs)
scaffold0189 (79-161)||(25993-26075)
[»] scaffold0155 (1 HSPs)
scaffold0155 (296-332)||(17366-17402)


Alignment Details
Target: chr1 (Bit Score: 154; Significance: 2e-81; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 251 - 474
Target Start/End: Original strand, 48594166 - 48594388
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||  ||||||    
T  48594166 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatgatgggaaaaaagtagctttccaatgctaa 48594265  T
Q  351 acctcacctatgccagggggatagtcagttgattcaatatataccattttgatttcttnnnnnnnnnnnttgaggttattttacttagattatttgcaat 450  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||| ||||||||||||||||||||||    
T  48594266 acctcacctatgccagggggatagtcagttgattcaatatataccattttgatttctt-acaaaaaaaattgaggtttttttacttagattatttgcaat 48594364  T
Q  451 acaaattaatattatcatataatt 474  Q
    | ||||||||||||||||||||||    
T  48594365 ataaattaatattatcatataatt 48594388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 251 - 474
Target Start/End: Original strand, 48598777 - 48598999
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||  ||||||    
T  48598777 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatgatgggaaaaaagtagctttccaatgctaa 48598876  T
Q  351 acctcacctatgccagggggatagtcagttgattcaatatataccattttgatttcttnnnnnnnnnnnttgaggttattttacttagattatttgcaat 450  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||| ||||||||||||||||||||||    
T  48598877 acctcacctatgccagggggatagtcagttgattcaatatataccattttgatttctt-acaaaaaaaattgaggtttttttacttagattatttgcaat 48598975  T
Q  451 acaaattaatattatcatataatt 474  Q
    | ||||||||||||||||||||||    
T  48598976 ataaattaatattatcatataatt 48598999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 264 - 474
Target Start/End: Original strand, 48589092 - 48589305
Alignment:
Q  264 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaat--tagctttcccttgctaaacctcacctat 361  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||||||| ||||||||||| | ||||||   ||| |||||| ||||||||||||| |||    
T  48589092 agtatgataaggatgtgttcttgatttgatctaatcgtcgaaaactaattttcccatggtagaaaaaaaaagtagttttcccatgctaaacctcacatat 48589191  T
Q  362 gccagggggatagtcagttgattcaatatataccattttgatttcttnnnnnnnnnnnttgagg-ttattttacttagattatttgcaatacaaattaat 460  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||           |||||| || ||||||||||||||||||||||||||| ||||    
T  48589192 gccagggggatagtcagttgattcaatatataccattttgatttattttttttaaaaattgaggtttcttttacttagattatttgcaatacaaactaat 48589291  T
Q  461 attatcatataatt 474  Q
    ||||||||||||||    
T  48589292 attatcatataatt 48589305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 2821065 - 2820957
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  2821065 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgttaa 2820966  T
Q  351 acctcacct 359  Q
    |||||||||    
T  2820965 acctcacct 2820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 12800411 - 12800518
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  12800411 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagttttcccatgctaa 12800510  T
Q  351 acctcacc 358  Q
    ||||||||    
T  12800511 acctcacc 12800518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 28371644 - 28371751
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  28371644 ctagtgatgagggagtatgataaggatgtgtttttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 28371743  T
Q  351 acctcacc 358  Q
    ||||||||    
T  28371744 acctcacc 28371751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 2821430 - 2821537
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||| | | ||||    
T  2821430 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaattaactttcccatggtgggaaaaaagtagttttctcatactaa 2821529  T
Q  351 acctcacc 358  Q
    ||||||||    
T  2821530 acctcacc 2821537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 48153100 - 48153205
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||| |||||||||| ||||||    
T  48153100 ctagtgatgaaggagtatgataaggatgtgttcttggtttgatctaatgatcaaaaactaactttcccatattgggaaaaaagtagctttcccatgctaa 48153199  T
Q  351 acctca 356  Q
    ||||||    
T  48153200 acctca 48153205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 33631031 - 33631139
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||    
T  33631031 ctagtgatgagggagtatggtaaggatgtgttcttcgtttgatctaatggtcaaaaactaattttcccatggtgggaaaaaagtagttttcccatgctaa 33631130  T
Q  351 acctcacct 359  Q
    | |||||||    
T  33631131 atctcacct 33631139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 43756288 - 43756395
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  43756288 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatttaatggttaaaaactaactttcccatggt-ggaaaaaattagtctttcccatgcta 43756386  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  43756387 aacttcacc 43756395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 50164336 - 50164236
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 358  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  50164336 gagggagtatgataaggatgtattcttggtttgatctaatggtcataaactaactttcccatagtgggaaaaaagtagttttcccatgctaaacctcacc 50164237  T
Q  359 t 359  Q
    |    
T  50164236 t 50164236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 12800096 - 12799989
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| | ||||    
T  12800096 ctagtgatgaggaagtatgataaggatgtgtttttggtttgatctaatggtcaaaaactaactttcccatggtagaaaaaaagtagctttcccatactaa 12799997  T
Q  351 acctcacc 358  Q
    ||||||||    
T  12799996 acctcacc 12799989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 50164650 - 50164757
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||| ||| |||||| | ||||    
T  50164650 ctagtgatgaaggagtatgataaggatgtgttcttgatttgatctaatggtcaaaaactaactttcctatggtggaaaaaaagtagttttcccatactaa 50164749  T
Q  351 acctcacc 358  Q
    ||||||||    
T  50164750 acctcacc 50164757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 38328827 - 38328935
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||| |||| ||||||||| ||||||| |||||    
T  38328827 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatgattaaaaactaactttcccatgatggg-aaaaattagtctttcccatgcta 38328925  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  38328926 aacttcacct 38328935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 28371306 - 28371198
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||| || ||||||| | ||||    
T  28371306 ctagtgatgagagagtatgataaagatgtgttcttggtttgatctaatggtcaaaaactaactttttcatggtaggaaaaaagtaactttcccatactaa 28371207  T
Q  351 acctcacct 359  Q
    |||||||||    
T  28371206 acctcacct 28371198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 43755948 - 43755849
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 357  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||    
T  43755948 gagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcac 43755850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 38469226 - 38469336
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| || |||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  38469226 ctagtgatgatggagtatggtaaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatggt-ggaaaaaattagcctttcccatgcta 38469324  T
Q  350 aacctcacctat 361  Q
    ||| ||||||||    
T  38469325 aacttcacctat 38469336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 38469013 - 38468904
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  38469013 ctagtgatgagggagtatggtaaggatgtgttcttgatttaatataatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 38468915  T
Q  350 aacctcaccta 360  Q
    ||| |||||||    
T  38468914 aacttcaccta 38468904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 17151864 - 17151929
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 360  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  17151864 taatggtcaaaaactaactttcccatggtggaaaaaaagtagctttcccatgctaaacctcaccta 17151929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 33630543 - 33630475
Alignment:
Q  292 atttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 360  Q
    |||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||||    
T  33630543 atttaatggtcaaaaactaactttcccatggtggaaaataagtagctttcccatgctaaacctcaccta 33630475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 38328494 - 38328415
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaa 330  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||| ||||| | ||||||    
T  38328494 ctagtgatgagggagtatggtaaggatttgttcttggtttgatctaatggttaaaaactaacttttccatgataggaaaa 38328415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 359
Target Start/End: Complemental strand, 17151062 - 17151001
Alignment:
Q  298 tggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 359  Q
    |||||||||| |||||||||||||||||||||||     ||||||| |||||||||||||||    
T  17151062 tggtcaaaaaataactttcccatggtgggaaaaaccagcctttcccatgctaaacctcacct 17151001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 32537707 - 32537672
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    |||||| |||||||||||||||||||||||||||||    
T  32537707 aatggttaaaaactaactttcccatggtgggaaaaa 32537672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 32538488 - 32538550
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 358  Q
    |||||| ||||||||||||| |||||||||| ||||||||| ||||||| |||||||| |||||    
T  32538488 aatggttaaaaactaacttttccatggtggg-aaaaattagcctttcccatgctaaacttcacc 32538550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 332
Target Start/End: Original strand, 45065378 - 45065407
Alignment:
Q  303 aaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||||||||||||||||||||||||||    
T  45065378 aaaaactaactttcccatggtgggaaaaaa 45065407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 28983233 - 28983343
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  28983233 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 28983332  T
Q  351 acctcacctat 361  Q
    |||||||||||    
T  28983333 acctcacctat 28983343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 34717696 - 34717805
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  34717696 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 34717795  T
Q  351 acctcaccta 360  Q
    ||||||||||    
T  34717796 acctcaccta 34717805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 19062764 - 19062871
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  19062764 ctagtgatgagggagtatgataaggatgtgtttttggtttgatctaatggtcaaaaactaactttctcatggtgggaaaaaagtagctttcccatgctaa 19062863  T
Q  351 acctcacc 358  Q
    | ||||||    
T  19062864 agctcacc 19062871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 34717349 - 34717241
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||| |||||||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  34717349 ctagtgatgagagagtatgataaggacgtgttcttgatttgatctaatgatcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 34717250  T
Q  351 acctcacct 359  Q
    |||||||||    
T  34717249 acctcacct 34717241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 7635576 - 7635685
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  7635576 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagtctttcccatgcta 7635674  T
Q  350 aacctcaccta 360  Q
    ||| |||||||    
T  7635675 aacttcaccta 7635685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 28982888 - 28982782
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |  ||||||| ||| |||||| ||||||    
T  28982888 ctagtgatgagggagtatgataaggatgtgttcttggtttgatcgaatggtcaaaaactaactttcccatgat-agaaaaaagtagttttcccatgctaa 28982790  T
Q  351 acctcacc 358  Q
    ||||||||    
T  28982789 acctcacc 28982782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 7635231 - 7635123
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  7635231 ctagtgatgagggagtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 7635133  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  7635132 aacttcacct 7635123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 18290436 - 18290543
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  18290436 ctagtgatgagggagtatggtaaggatttgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgcta 18290534  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  18290535 aacttcacc 18290543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 28535412 - 28535506
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgg-gaaaaaattagctttcccttgctaaac 352  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  |||||| |||||||||| ||||||||    
T  28535412 gaggaagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcctatggtggaaaaaaaagtagctttcccatgctaaac 28535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 18290322 - 18290214
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagc-tttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||| |||||    
T  18290322 ctagtgatgagggagtatggtaaggatttgttcttggtttgatctaatggttaaaaattaactttcccatggtggga-aaaattagcttttcccatgcta 18290224  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  18290223 aacttcacct 18290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 2924952 - 2925021
Alignment:
Q  290 tgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 359  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  2924952 tgatctaatggtcaaaaactaactttcctatggtgggaaaaaagtagctttcccatgctaaacctcacct 2925021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 4348954 - 4348846
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||||  ||||||| ||||| | | ||||| | ||||||    
T  4348954 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaacaaactttcttatggtggaaaaaattaatctttctcatgctaa 4348855  T
Q  351 acctcacct 359  Q
    || ||||||    
T  4348854 acttcacct 4348846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 12999426 - 12999498
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||| | ||||||||||||||    
T  12999426 gagggagtatggtaaggatatgttcttggtttgatctaatggttaaaaactaacttgctcatggtgggaaaaa 12999498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 10608304 - 10608341
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10608304 taatggtcaaaaactaactttcccatggtgggaaaaaa 10608341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 14496489 - 14496445
Alignment:
Q  313 tttcccatggtgggaaaaaattagctttcccttgctaaacctcac 357  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||    
T  14496489 tttcccatggtgagaaaaaagtagctttcccatgctaaacctcac 14496445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 930988 - 930950
Alignment:
Q  295 taatggtcaaaaactaac-tttcccatggtgggaaaaaa 332  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  930988 taatggtcaaaaactaacttttcccatggtgggaaaaaa 930950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 18605845 - 18605901
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaac 352  Q
    |||||| |||||| |||||||||||||| |||||||||||| ||||||| ||||||||    
T  18605845 aatggttaaaaacaaactttcccatggt-ggaaaaaattagcctttcccatgctaaac 18605901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 20559853 - 20559745
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  20559853 ctagtgatgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtggaaaaaaaatagctttcccatgctaa 20559754  T
Q  351 acctcacct 359  Q
    |||||||||    
T  20559753 acctcacct 20559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 20560222 - 20560330
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  20560222 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaatatagctttcccatgctaa 20560321  T
Q  351 acctcacct 359  Q
    |||||||||    
T  20560322 acctcacct 20560330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 33139881 - 33139774
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||||| |||||||||| ||||||    
T  33139881 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaaccaactttctcatggtggaaaaaaagtagctttcccatgctaa 33139782  T
Q  351 acctcacc 358  Q
    ||||||||    
T  33139781 acctcacc 33139774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 33140235 - 33140342
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| | ||||    
T  33140235 ctagtgatgagggagtatgataaggatgtgttcttagtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtaactttcccatactaa 33140334  T
Q  351 acctcacc 358  Q
    ||||||||    
T  33140335 acctcacc 33140342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 42901077 - 42901185
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||  | ||||||    
T  42901077 ctagtgatgagggagtatgataacaatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaaatagctttttcatgctaa 42901176  T
Q  351 acctcacct 359  Q
    |||||||||    
T  42901177 acctcacct 42901185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 4179744 - 4179637
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||| | ||||||    
T  4179744 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggtcaaatactaactttcccatggtgggaaaaaaatagttttctcatgctaa 4179645  T
Q  351 acctcacc 358  Q
    ||||||||    
T  4179644 acctcacc 4179637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 4180279 - 4180387
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||||| || || |||    
T  4180279 ctagtgatgagggagtatggtaaggatgtgttcttagtttgatctaatggtcaaaaactaactttcccatggtgggaaaaatgtagcttttccatgttaa 4180378  T
Q  351 acctcacct 359  Q
    |||||||||    
T  4180379 acctcacct 4180387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 30414288 - 30414179
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| | |||    
T  30414288 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatacta 30414190  T
Q  350 aacctcaccta 360  Q
    ||| |||||||    
T  30414189 aacttcaccta 30414179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 40641111 - 40641218
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    |||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||   |||||| || ||||||| ||||||    
T  40641111 ctagtgataagggagtatgataaggatgtgttcttgatttgatctaatggtcaaaaactaactttcccatagtaaaaaaaaagtaactttcccatgctaa 40641210  T
Q  351 acctcacc 358  Q
    ||||||||    
T  40641211 acctcacc 40641218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 42900742 - 42900647
Alignment:
Q  263 gagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 358  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||  |||||| || |||| || ||||||||||||||    
T  42900742 gagtatgataaggatgtgttcttgatttgatctaatggtcaaaaactaactttcccatggtgaaaaaaaagtaccttttccatgctaaacctcacc 42900647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 25137519 - 25137410
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  25137519 ctagtgatgagggagtatggtaaggatgtgttattgatttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 25137421  T
Q  350 aacctcaccta 360  Q
    ||| |||||||    
T  25137420 aacttcaccta 25137410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 40640757 - 40640653
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||| | ||||||||||||||||   ||||||||||| ||  |||||| ||||||    
T  40640757 ctagtgatgagggagaatgataatgatgtgttcttggtttgatttaatgattaaaaactaactttccc---gtgggaaaaaagtaattttcccatgctaa 40640661  T
Q  351 acctcacc 358  Q
    ||||||||    
T  40640660 acctcacc 40640653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 25137865 - 25137973
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttgg-tttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgct 348  Q
    ||||||| ||||||||||| ||||||||||||||| | |||||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||||| ||||    
T  25137865 ctagtgatgagggagtatggtaaggatgtgttctttgatttgatctaatggttaaaaactaattttcccatggtggg-aaaaattagtctttcccatgct 25137963  T
Q  349 aaacctcacc 358  Q
    |||| |||||    
T  25137964 aaacttcacc 25137973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 35211996 - 35211940
Alignment:
Q  264 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccat 320  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  35211996 agtatgataagaatgtgttcttgatttgatttaatggtcaaaaactaacttttccat 35211940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 33686987 - 33686926
Alignment:
Q  297 atggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 358  Q
    ||||| ||||||||||||||||||||||||||||| | | ||||||| |||||||| |||||    
T  33686987 atggttaaaaactaactttcccatggtgggaaaaattaacctttcccatgctaaacttcacc 33686926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 29006411 - 29006374
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29006411 taatggttaaaaactaactttcccatggtgggaaaaaa 29006374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 29007183 - 29007220
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29007183 taatggttaaaaactaactttcccatggtgggaaaaaa 29007220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 41224828 - 41224865
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaat 333  Q
    |||||| |||||||||||||||||||||||||||||||    
T  41224828 aatggttaaaaactaactttcccatggtgggaaaaaat 41224865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 359
Target Start/End: Original strand, 33687735 - 33687798
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 359  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||||||| |||||||| ||||||    
T  33687735 aatggttaaaaactaactttctcatggt-ggaaaaaattagcctttcccatgctaaacttcacct 33687798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 42607151 - 42607078
Alignment:
Q  288 tttgatttaatggtcaaaaactaactttcccatggtgggaaaaaatt-agctttcccttgctaaacctcacctat 361  Q
    |||||| |||||| ||||||| |||||||||||||||||||| ||||   ||||||| ||||||||| |||||||    
T  42607151 tttgatctaatggacaaaaac-aactttcccatggtgggaaacaattcccctttcccatgctaaaccccacctat 42607078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 35613231 - 35613264
Alignment:
Q  298 tggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    |||||||||||||||||| |||||||||||||||    
T  35613231 tggtcaaaaactaacttttccatggtgggaaaaa 35613264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 44896110 - 44896073
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  44896110 taatggttaaaaactaactttcccatggtggggaaaaa 44896073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 29314644 - 29314608
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  29314644 aatggttaaaaactaactttcccatggtggaaaaaaa 29314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 930374 - 930481
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  930374 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 930473  T
Q  351 acctcacc 358  Q
    ||||||||    
T  930474 acctcacc 930481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 11442096 - 11442204
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11442096 ctagtgatgagggagtatgataaggatgtgttctttgtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 11442195  T
Q  351 acctcacct 359  Q
    |||||||||    
T  11442196 acctcacct 11442204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 21166097 - 21166204
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||| ||||||    
T  21166097 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaattttcccatggtgggaaaaaagtaactttcccatgctaa 21166196  T
Q  351 acctcacc 358  Q
    ||||||||    
T  21166197 acctcacc 21166204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 32473868 - 32473761
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  32473868 ctagtgatgagggagtataataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatagtgggaaaaaagtagctttcccatgctaa 32473769  T
Q  351 acctcacc 358  Q
    ||||||||    
T  32473768 acctcacc 32473761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 42257321 - 42257215
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| ||||||    
T  42257321 ctagtgatgagggagtatgataaagatgtgttcttggtttgatttaatggtcaaaaactaacttttccatggtgggaaaaaagtagttttcccatgctaa 42257222  T
Q  351 acctcac 357  Q
    |||||||    
T  42257221 acctcac 42257215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 930018 - 929910
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| | |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  930018 ctagtgatgggggagtatgataaggatgtgttattggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagatttcccatgctaa 929919  T
Q  351 acctcacct 359  Q
    |||||||||    
T  929918 acctcacct 929910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 32474403 - 32474511
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  32474403 ctagtgatgagggagtatggtaaggatgcgttcttcgtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 32474502  T
Q  351 acctcacct 359  Q
    |||||||||    
T  32474503 acctcacct 32474511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 43521181 - 43521075
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||||||||||||    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  43521181 ctagtgatgagggagtatgataaggatgtgta---ggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaa 43521085  T
Q  351 acctcaccta 360  Q
    ||||||||||    
T  43521084 acctcaccta 43521075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 251 - 352
Target Start/End: Original strand, 38000233 - 38000334
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  38000233 ctagtgatgaggaagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaacttttccatggtgggaaaaaagcagctttcccatgctaa 38000332  T
Q  351 ac 352  Q
    ||    
T  38000333 ac 38000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 26006719 - 26006829
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| ||||||||| ||||||| |||||    
T  26006719 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttctcatgatggg-aaaaattagcctttcccatgcta 26006817  T
Q  350 aacctcacctat 361  Q
    ||| ||||||||    
T  26006818 aacttcacctat 26006829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 5113305 - 5113197
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  5113305 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 5113207  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  5113206 aacttcacct 5113197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 11441756 - 11441664
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttccc 343  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| || |||||||    
T  11441756 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgaaaaaaaagtaactttccc 11441664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 20586525 - 20586632
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  20586525 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgcta 20586623  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  20586624 aacttcacc 20586632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 24394675 - 24394782
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagc-tttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||    
T  24394675 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcatttcccatgcta 24394773  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  24394774 aacttcacc 24394782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 50766725 - 50766631
Alignment:
Q  262 ggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcac 357  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  50766725 ggagtatgataagaatgtgttcttggtttgatctaatggtcaaaaattaacttt-ccatggtgggaaaaaagtagctttcccatgctaaacctcac 50766631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 5113649 - 5113759
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| | |  |||||||| ||||||    
T  5113649 ctagtgatgagggagtatggtaaggatgtattcttggtttgatctaatggttaaaaactaactttcccatggtgggaaagattaggctttcccatgctaa 5113748  T
Q  351 acctcacctat 361  Q
    || ||||||||    
T  5113749 acttcacctat 5113759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 36992114 - 36992223
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| | |||    
T  36992114 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatacta 36992212  T
Q  350 aacctcaccta 360  Q
    ||| |||||||    
T  36992213 aacttcaccta 36992223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 37017554 - 37017663
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| | |||    
T  37017554 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatacta 37017652  T
Q  350 aacctcaccta 360  Q
    ||| |||||||    
T  37017653 aacttcaccta 37017663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 14788549 - 14788650
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 358  Q
    |||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||| || |||||||||||    
T  14788549 gaggaagtatgataagaatgtcttcttggtttgatctaatggtcaaaaactaactttcccatgataggaaaaaagtagctttcccatgttaaacctcacc 14788648  T
Q  359 ta 360  Q
    ||    
T  14788649 ta 14788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 20586179 - 20586072
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  20586179 ctagtgatgagggagtatggtaaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 20586081  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  20586080 aacttcacc 20586072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 45000768 - 45000848
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  45000768 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtgggaaaaa 45000848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 14788380 - 14788272
Alignment:
Q  252 tagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtggg-aaaaaattagctttcccttgctaa 350  Q
    |||||| ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||  ||||||||| |||||| ||| |||||| ||||||    
T  14788380 tagtgatgagggagtatgataaagatgtgttcttggtttgttctaatggtcaaaaactaacttt-tcatggtgggaaaaaaagtagatttcccatgctaa 14788282  T
Q  351 acctcaccta 360  Q
    ||||||||||    
T  14788281 acctcaccta 14788272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 24394354 - 24394247
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||| ||||||| | |||    
T  24394354 ctagtgatgagggagtatgctaaggatgtgttcttggtttgatctaatggttaaaaactaactttcctatggt-ggaaaaaattagtctttcccatacta 24394256  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  24394255 aacttcacc 24394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 45000422 - 45000316
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||| ||||||||| ||||||| |||||    
T  45000422 ctagtgatgagggagtatggtaaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatagtggg-aaaaattagcctttcccatgcta 45000324  T
Q  350 aacctcac 357  Q
    ||| ||||    
T  45000323 aacttcac 45000316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 26006253 - 26006146
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| || |||||||| |||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  26006253 ctagtgatgaaggagtatggtaaggatgtgttattagtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 26006155  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  26006154 aacttcacc 26006146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 332
Target Start/End: Original strand, 42258003 - 42258083
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||| |||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  42258003 ctagtgatgagggagtatgataag-atgtgttattgatttgatctaatggtcaaaaactaactttccaatgatgggaaaaaa 42258083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 43104726 - 43104826
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagc-tttcccttgctaaacctcac 357  Q
    ||||||||||| ||| ||||||||||| ||||||| ||||||| ||||||||||||||||||  |||| |||||||||| |||||| |||||||| ||||    
T  43104726 gagggagtatggtaaagatgtgttcttcgtttgatctaatggttaaaaactaactttcccattatggg-aaaaattagcatttcccatgctaaacttcac 43104824  T
Q  358 ct 359  Q
    ||    
T  43104825 ct 43104826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 50836265 - 50836214
Alignment:
Q  309 taactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 360  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  50836265 taactttcccatggtgggaaaaaaatagctttcccatgctaaacctcaccta 50836214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 50839588 - 50839639
Alignment:
Q  309 taactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 360  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  50839588 taactttcccatggtgggaaaaaaatagctttcccatgctaaacctcaccta 50839639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 24181950 - 24181987
Alignment:
Q  317 ccatggtgggaaaaaattagctttcccttgctaaacct 354  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  24181950 ccatggtgggaaaaaagtagctttcccatgctaaacct 24181987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 14197766 - 14197656
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  14197766 ctagtgatgagggagtatgataaggatgtgttcttgctttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtaactttcccatgctaa 14197667  T
Q  351 acctcacctat 361  Q
    |||||||||||    
T  14197666 acctcacctat 14197656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 37657954 - 37657847
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||    
T  37657954 ctagtgatgagggagtatgataaagatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtagaaaaaaagtagctttcccatgctaa 37657855  T
Q  351 acctcacc 358  Q
    ||||||||    
T  37657854 acctcacc 37657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 39439865 - 39439760
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||| |||||||||| ||||||| || | ||||    
T  39439865 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatagtcaaaaactaacttttctatgatgggaaaaaagtagcttttccatactaa 39439766  T
Q  351 acctca 356  Q
    ||||||    
T  39439765 acctca 39439760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 30846123 - 30846016
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||| ||||||| |||||    
T  30846123 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcctatggtggga-aaaattagtctttcccatgcta 30846025  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  30846024 aacttcacc 30846016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 41714710 - 41714603
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||  |||| ||  |||||| |||||||||| ||||||    
T  41714710 ctagtgatgagggattatgataaggatgtgttcttggtttgatctaatgatcaaaaactaactttttcatgatgaaaaaaaaatagctttcccatgctaa 41714611  T
Q  351 acctcacc 358  Q
    ||||||||    
T  41714610 acctcacc 41714603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 30846437 - 30846545
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||| ||||||| |||||    
T  30846437 ctagtgatgagggagtatggtaaggatatgttcttggtttgatctaatggttaaaaactaattttcccatggt-ggaaaaaattagcctttcccatgcta 30846535  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  30846536 aacttcacct 30846545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 39440540 - 39440644
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||| ||| |||| | ||||||    
T  39440540 ctagtgatgagggagtattataaggatgtgttcttggtttgatttaatggtcaaaaactaacttttttatggt-ggaaaaaagtagttttctcatgctaa 39440638  T
Q  351 acctca 356  Q
    ||||||    
T  39440639 acctca 39440644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 31408164 - 31408223
Alignment:
Q  299 ggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 358  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  31408164 ggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacc 31408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 41715208 - 41715272
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaacttt 315  Q
    ||||||| || |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  41715208 ctagtgatgatggagtatgataaggatatgttcttggtttgatctaatggtcaaaaactaacttt 41715272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 42573646 - 42573602
Alignment:
Q  292 atttaatggtcaaaaactaactttcccatggtgggaaaaaattag 336  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  42573646 atttaatggtcaaaaactaattttctcatggtgggaaaaaattag 42573602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 37658496 - 37658549
Alignment:
Q  262 ggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaacttt 315  Q
    |||||||| |||||| |||||||| ||||||| ||||||| |||||||||||||    
T  37658496 ggagtatggtaaggacgtgttcttcgtttgatctaatggtaaaaaactaacttt 37658549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 35759223 - 35759260
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  35759223 taatggttaaaaactaactttcccatggtggggaaaaa 35759260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 41348208 - 41348171
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  41348208 taatggttaaaaactaactttcccatggtggggaaaaa 41348171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 41092235 - 41092199
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  41092235 aatggttaaaaactaacttttccatggtgggaaaaaa 41092199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 5620810 - 5620917
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||| ||||||    
T  5620810 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaattttcccatggtgggaaaaaagtaactttcccatgctaa 5620909  T
Q  351 acctcacc 358  Q
    ||||||||    
T  5620910 acctcacc 5620917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 34599039 - 34598892
Alignment:
Q  12 ggggaataacaacaaatctaagaaaaacaagagaggaaaaaagggtaagaagtgaaaattgtcaggtgttttgtacatgcaaatgctgtagtaatttttg 111  Q
    |||||| || ||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||    
T  34599039 ggggaagaaaaacaagtccaagaaaaacaagggaggaaaaaagggtaagaagtgaaaattgtcgggtcttttgtacatgcaaatgctgtagtaa--tttg 34598942  T
Q  112 tgctttcacttcaaactgtctggttatggtatttcccgactgtggaatct 161  Q
    || || ||||||||||| |||| ||||||||| ||| || | ||||||||    
T  34598941 tgtttacacttcaaactatctgattatggtatatcctgattttggaatct 34598892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 12330603 - 12330712
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  12330603 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgcta 12330701  T
Q  350 aacctcaccta 360  Q
    ||| |||||||    
T  12330702 aacttcaccta 12330712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 3595884 - 3595776
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  3595884 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 3595786  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  3595785 aacttcacct 3595776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 8321328 - 8321435
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  8321328 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgcta 8321426  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  8321427 aacttcacc 8321435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 42655681 - 42655791
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||| || |||||||||| ||||||    
T  42655681 ctagtgatgaggaagtatgataaggatgtgttattggtttgatctaatggtcaaaaactaatttttccatggtgggaaagaagtagctttcccatgctaa 42655780  T
Q  351 acctcacctat 361  Q
    || | ||||||    
T  42655781 acgtgacctat 42655791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 7858426 - 7858326
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 357  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||    
T  7858426 gagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcac 7858328  T
Q  358 ct 359  Q
    ||    
T  7858327 ct 7858326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 12330255 - 12330148
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||| ||||||| |||||    
T  12330255 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaattaactttcccatggtggga-aaaattagcctttcccatgcta 12330157  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  12330156 aacttcacc 12330148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 16996970 - 16997058
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctt 339  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||    
T  16996970 ctagtgatgagggagtatggtaaggatgtgttcttcgtttgatctaatggtcaaaaactaactttcccatggtaggaaaaaagtagctt 16997058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 8320982 - 8320875
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||| ||||||| || ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  8320982 ctagtgatgagggagtatggtaaggatgtgttattggtttaatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 8320884  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  8320883 aacttcacc 8320875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 24027294 - 24027187
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||| |||||||| ||||||| |||||    
T  24027294 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatagttaaaaactaacttttccatggtggga-aaaattagcctttcccatgcta 24027196  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  24027195 aacttcacc 24027187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 24027627 - 24027707
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  24027627 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatgatgggaaaaa 24027707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 29759704 - 29759597
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| | ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||||||||||| ||||||| |||||    
T  29759704 ctagtgatgggggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatagt-ggaaaaaattagtctttcccatgcta 29759606  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  29759605 aacttcacc 29759597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 357
Target Start/End: Original strand, 3596234 - 3596340
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||||| |||||    
T  3596234 ctagtgatgagggagtatagtaaggatgtgttcttggtttgatctaatggttaaaaactaattttcccatggtggg-aaaaattagtctttcccatgcta 3596332  T
Q  350 aacctcac 357  Q
    ||| ||||    
T  3596333 aacttcac 3596340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 7858760 - 7858869
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||   ||||| | | ||||||| || |||    
T  7858760 ctagtgatgagggagtatggtaaggatgtattcttggtttgatttaatggttaaaaactaactttcccatggtaaaaaaaattaatctttcccatgttaa 7858859  T
Q  351 acctcaccta 360  Q
    || |||||||    
T  7858860 acttcaccta 7858869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 31078520 - 31078455
Alignment:
Q  294 ttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 359  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||    
T  31078520 ttaatggttaaaaactaactttcccatggt-ggaaaaaattagtctttcccatgctaaacttcacct 31078455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 36912302 - 36912245
Alignment:
Q  301 tcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 359  Q
    |||||||| ||||||||||||||||||||||||   ||||||| ||||||||| |||||    
T  36912302 tcaaaaac-aactttcccatggtgggaaaaaatagcctttcccatgctaaaccccacct 36912245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 19860437 - 19860330
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  19860437 ctagtgatgagggagtatggtaagtatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaaatagctttcccatgctaa 19860338  T
Q  351 acctcacc 358  Q
    ||||||||    
T  19860337 acctcacc 19860330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 19860813 - 19860921
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||    
T  19860813 ctagtgatgagggagtatgaaaaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccacggtgggaaaaaagtaggtttcccatgctaa 19860912  T
Q  351 acctcacct 359  Q
    |||||||||    
T  19860913 acctcacct 19860921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 20175077 - 20174969
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  20175077 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 20174979  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  20174978 aacttcacct 20174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 5235481 - 5235373
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  5235481 ctagtgatgagtgagtatgataaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 5235383  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  5235382 aacttcacct 5235373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 6934443 - 6934551
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  6934443 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggt-ggaaaaaattagtctttcccatgcta 6934541  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  6934542 aacttcacct 6934551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 6933928 - 6933820
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| | |||||||||||| ||||||| |||||    
T  6933928 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaacttttccatgat-ggaaaaaattagtctttcccatgcta 6933830  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  6933829 aacttcacct 6933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 52532230 - 52532125
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||| |||| |||| |||||||||||||| |  ||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  52532230 ctagtgatgagggagtataataaagatgcgttcttggtttgatctgctggtcaaaaacaaactttcccatggtgggaaaaaagtagttttcccatgctaa 52532131  T
Q  351 acctca 356  Q
    ||||||    
T  52532130 acctca 52532125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 52532379 - 52532479
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 358  Q
    |||||||||| | |||||||||||||||||||||| || |||||||||||||||||||| | |||||||||||| ||||||| || || |||||||||||    
T  52532379 gagggagtataacaaggatgtgttcttggtttgatctactggtcaaaaactaactttccaacggtgggaaaaaagtagcttttccatgttaaacctcacc 52532478  T
Q  359 t 359  Q
    |    
T  52532479 t 52532479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 5235827 - 5235935
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| || |||||||||  |||||| |||||    
T  5235827 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcctatggtagg-aaaaattagtttttcccatgcta 5235925  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  5235926 aacttcacct 5235935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 5259269 - 5259377
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| || |||||||||||| |||||||||||| |||||| |||||||| |||||||||||||||||| ||  |||||| ||| |||| | ||||||    
T  5259269 ctagtgatgaaggagtatgataaagatgtgttcttgatttgatctaatggtcgaaaactaactttcccatgatgaaaaaaaagtagttttctcatgctaa 5259368  T
Q  351 acctcacct 359  Q
    |||||||||    
T  5259369 acctcacct 5259377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 30213856 - 30213966
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||||  || | ||||||||||||| |||||||||||||||||||||  |||||| | |||||| ||| |||||| || |||    
T  30213856 ctagtgatgagggagtatgataaaaatatattcttggtttgatctaatggtcaaaaactaactttttcatggtagaaaaaaagtagttttcccatgataa 30213955  T
Q  351 acctcacctat 361  Q
    |||||||||||    
T  30213956 acctcacctat 30213966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 46764319 - 46764279
Alignment:
Q  292 atttaatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46764319 atttaatggtcaaaaactaactttcccatggtgggaaaaaa 46764279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 11680340 - 11680303
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11680340 taatggtcaaaaactaactttcccatggtgggaaaaaa 11680303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 11688619 - 11688582
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11688619 taatggtcaaaaactaactttcccatggtgggaaaaaa 11688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 25655623 - 25655660
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25655623 taatggtcaaaaactaactttcccatggtgggaaaaaa 25655660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 31910621 - 31910581
Alignment:
Q  292 atttaatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  31910621 atttaatggttaaaaactaactttcccatggtgggaaaaaa 31910581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 12590187 - 12590229
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaattagc 337  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  12590187 taatggtcaaaaactaactttcccatggtggaaaaaaactagc 12590229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 20175366 - 20175421
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaa 306  Q
    ||||||| ||||||| ||| |||||||||||| |||||||||| ||||||| ||||    
T  20175366 ctagtgatgagggagcatggtaaggatgtgttattggtttgatctaatggttaaaa 20175421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 3167463 - 3167525
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 358  Q
    |||||| |||||  |||||||||||||||||||||| | | ||||||| ||||||||| ||||    
T  3167463 aatggttaaaaaacaactttcccatggtgggaaaaagtaatctttcccatgctaaaccccacc 3167525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 39412827 - 39412771
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaac 352  Q
    |||||| ||||||||||||||||||| |||| ||||||||| ||||||| ||||||||    
T  39412827 aatggttaaaaactaactttcccatgatggg-aaaaattagcctttcccatgctaaac 39412771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 3847957 - 3847913
Alignment:
Q  288 tttgatttaatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    |||||| |||||||||||||   ||||||||||||||||||||||    
T  3847957 tttgatctaatggtcaaaaaaatactttcccatggtgggaaaaaa 3847913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 359
Target Start/End: Original strand, 39413607 - 39413670
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 359  Q
    |||||| ||||||||||||||| |||||||| ||||||||| ||||||| | |||||| ||||||    
T  39413607 aatggttaaaaactaactttcctatggtggg-aaaaattagtctttcccattctaaacttcacct 39413670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 3705444 - 3705337
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||    
T  3705444 ctagtgatgagggagtatgatatggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcctatgctaa 3705345  T
Q  351 acctcacc 358  Q
    ||||||||    
T  3705344 acctcacc 3705337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 16681673 - 16681566
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || |||||||||| ||||||    
T  16681673 ctagtgatgagggagtatgataaggatgtgttcttggtttgatctaatggccaaaaactaactttcccatgatgggaaataactagctttcccatgctaa 16681574  T
Q  351 acctcacc 358  Q
    ||||||||    
T  16681573 acctcacc 16681566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 3705765 - 3705876
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgg--gaaaaaattagctttcccttgct 348  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||| |||  ||||| ||||    
T  3705765 ctagtgatgaaggagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtggaaaaaaaaagtagtcttcccatgct 3705864  T
Q  349 aaacctcaccta 360  Q
    ||||||||||||    
T  3705865 aaacctcaccta 3705876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 30899497 - 30899390
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  30899497 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 30899399  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  30899398 aacttcacc 30899390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 15561981 - 15562089
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  15561981 ctagtgatgagggagtatggtaaggatgtgttcttggtttaatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgcta 15562079  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  15562080 aacttcacct 15562089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 16903838 - 16903946
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  16903838 ctagtgatgagggagtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgcta 16903936  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  16903937 aacttcacct 16903946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 16992332 - 16992441
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| | ||||||||| ||||||| |||||    
T  16992332 ctagtgatgagggagtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttcccatggtgaggaaaaattagcctttcccatgcta 16992431  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  16992432 aacttcacct 16992441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 6609984 - 6610091
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  6609984 ctagtgatgagggagtatggtaaggatgtgttcttggtttaatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgcta 6610082  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  6610083 aacttcacc 6610091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 7994522 - 7994621
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 357  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||    
T  7994522 gagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggt-ggaaaaaattagcctttcccatgctaaacttcac 7994620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 15561648 - 15561540
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |||||||| ||||||| |||||    
T  15561648 ctagtgatgagggagtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttccaatggtggga-aaaattagtctttcccatgcta 15561550  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  15561549 aacttcacct 15561540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 37996532 - 37996632
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 357  Q
    |||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||    
T  37996532 gagggagtatgataaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatgatggg-aaaaattagcctttcccatgctaaacttcac 37996630  T
Q  358 ct 359  Q
    ||    
T  37996631 ct 37996632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 7994162 - 7994082
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  7994162 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatgatgggaaaaa 7994082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 6609658 - 6609552
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| |||||||||||| ||||||| || ||||||| ||||||||||||| ||||||||||| |||||||| ||||||| |||||    
T  6609658 ctagtgaagagggagtatggtaaggatgtgttgttggtttcatctaatggttaaaaactaacttttccatggtggga-aaaattagcctttcccatgcta 6609560  T
Q  350 aacctcac 357  Q
    ||| ||||    
T  6609559 aacttcac 6609552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 16903504 - 16903425
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    ||||||| ||||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||    
T  16903504 ctagtgatgagggagtatggtaaggatgtgttcttg-tttgatctaatggttaaaaactaacttttccatggtgggaaaaa 16903425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 30899850 - 30899949
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 357  Q
    ||||||||||| ||||||||||||||||||||||| |||| || |||||||||||||  ||||||||| ||||||||| ||||||| |||||||| ||||    
T  30899850 gagggagtatggtaaggatgtgttcttggtttgatctaatagttaaaaactaactttttcatggtggg-aaaaattagcctttcccatgctaaacttcac 30899948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 16682215 - 16682288
Alignment:
Q  259 gagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    ||||||||||| ||  ||||||||||| |||||||||||| |||||||||||||||| |||  |||||||||||    
T  16682215 gagggagtatggtatagatgtgttcttcgtttgatttaatagtcaaaaactaactttgccaatgtgggaaaaaa 16682288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 34617716 - 34617652
Alignment:
Q  295 taatggtcaaaaactaactttcccatggtgggaaaaaatta-gctttcccttgctaaacctcacct 359  Q
    ||||||||||||| ||||||||||||||||||||| |||||  ||||||| ||||||||| |||||    
T  34617716 taatggtcaaaaa-taactttcccatggtgggaaacaattatcctttcccatgctaaaccccacct 34617652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 40992285 - 40992249
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  40992285 aatggttaaaaactaactttcccatggtaggaaaaaa 40992249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 4240 - 4130
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  4240 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgcta 4142  T
Q  350 aacctcacctat 361  Q
    ||| ||||||||    
T  4141 aacttcacctat 4130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 4565 - 4672
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||| | |||||||||||| ||||||| |||||    
T  4565 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatctaattgttaaaaactaactttcccatgat-ggaaaaaattagtctttcccatgcta 4663  T
Q  350 aacctcacc 358  Q
    ||| |||||    
T  4664 aacttcacc 4672  T

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Target: scaffold0022 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 61681 - 61573
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgcta 349  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||    
T  61681 ctagtgatgagggagtatgagaaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatgatggg-aaaaattagcctttcccatgcta 61583  T
Q  350 aacctcacct 359  Q
    ||| ||||||    
T  61582 aacttcacct 61573  T

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Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 62028 - 62089
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaac 312  Q
    ||||||| ||||||||||| |||||||||| |||||||||||| ||||| | ||||||||||    
T  62028 ctagtgatgagggagtatggtaaggatgtgatcttggtttgatctaatgctaaaaaactaac 62089  T

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Target: scaffold0006 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 202224 - 202304
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 331  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  202224 ctagtgatgagggagtatggtaaggatgtgttcttggtttgatttaatggttaaaaactaacttttccatggtgggaaaaa 202304  T

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Target: scaffold0095 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 42873 - 42977
Alignment:
Q  251 ctagtgacgagggagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaa 350  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||| ||| |||| | ||||||    
T  42873 ctagtgatgagggagtattataaggatgtgttcttggtttgatttaatggtcaaaaactaacttttttatggt-ggaaaaaagtagttttctcatgctaa 42971  T
Q  351 acctca 356  Q
    ||||||    
T  42972 acctca 42977  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 22203 - 22278
Alignment:
Q  287 gtttgatttaatggtcaaaaactaactttcccatggtgg-gaaaaaattagctttcccttgctaaacctcacctat 361  Q
    ||||||| |||||||||||||| || |||||||||||||  |||||| |||||||||| ||||||||  |||||||    
T  22203 gtttgatctaatggtcaaaaacaaattttcccatggtggaaaaaaaagtagctttcccatgctaaacgccacctat 22278  T

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Target: scaffold0189 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 25993 - 26075
Alignment:
Q  79 gttttgtacatgcaaatgctgtagtaatttttgtgctttcacttcaaactgtctggttatggtatttcccgactgtggaatct 161  Q
    ||||||| ||| |||||| ||||||||| ||| || ||  |||||||||||| ||||| |||||||||| ||||||| |||||    
T  25993 gttttgttcattcaaatgttgtagtaatgtttttgtttaaacttcaaactgtttggttttggtatttcctgactgtgaaatct 26075  T

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Target: scaffold0155 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 17402 - 17366
Alignment:
Q  296 aatggtcaaaaactaactttcccatggtgggaaaaaa 332  Q
    |||||| ||||||||||||||||||||||||||||||    
T  17402 aatggttaaaaactaactttcccatggtgggaaaaaa 17366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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