View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14432_low_7 (Length: 347)
Name: NF14432_low_7
Description: NF14432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14432_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 34 - 339
Target Start/End: Complemental strand, 36543907 - 36543602
Alignment:
| Q |
34 |
atcattgatacttcttggtccaatcagagtatgcttatcatcaatatggttgccttctcaaatcttccactcttagcctttctttcaacatgacatgata |
133 |
Q |
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| T |
36543907 |
atcattgatacttcttggtacaatcagagtatgcttatcatcaatatgtttgccttctaaaatcttccactcttagcctttctttcaacatgacaagata |
36543808 |
T |
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| Q |
134 |
aacatatcacttacatggataaaccaattagagataatacatgatacaatattcacaatcatgtgaaaaaagacatctagacgtacttgaggaaaattag |
233 |
Q |
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| T |
36543807 |
aacatatcacttacatggataaaccaattagagataatacatgatacaatattcacaatcatgtgaaataagacatatagacgtacttgaggaaaattag |
36543708 |
T |
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| Q |
234 |
tgaaaaaacacatttaattcaaacaattagaaatcaggttagaatatttaatctttctacttaattggtttcaaagacatagtcatgttttaataaagac |
333 |
Q |
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||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
36543707 |
tgaaaaaacacatgaaattcaaacaattagaaatcaggttaaaatatttaatctttctatttaattggtttcaaagacatagtcatgttttaataaagac |
36543608 |
T |
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| Q |
334 |
aagtat |
339 |
Q |
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|||||| |
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| T |
36543607 |
aagtat |
36543602 |
T |
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