View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14433_high_14 (Length: 325)
Name: NF14433_high_14
Description: NF14433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14433_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 320
Target Start/End: Original strand, 42341402 - 42341707
Alignment:
| Q |
18 |
agcagcagtgtcatctcaccggccgcag---cagcattacgctgcagtgtatccgaacaacaactctacaatggttcaggctgcttcatttgctattggc |
114 |
Q |
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| T |
42341402 |
agcagcagtgtcatctcaccggccgcagcagcagcattacgccgcagtgtatccgaacaacaactctacaatggctcaggctgcttcatttgctattggc |
42341501 |
T |
|
| Q |
115 |
ggcggcgggaatctaaacgttgttgcgccaccgtaccaaacggtggcacagggaggtggagcagttggagaaccttcgagttcagggtatgttgggaatg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42341502 |
ggcggcgggaatctaaacgttgttgcgccaccgtaccaaacggtggcacagggaggtggagcagttggagaaccttcgagttcagggtatgttgggaatg |
42341601 |
T |
|
| Q |
215 |
gtaagacgagagatagtataggtacggggtatcctccaccgccgccagctgtttgttacggagggagagtggtgaatggagcagcgggcggttatggcat |
314 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
42341602 |
gtaagacgagagatagtataggtacggggtatcctccgccgccgccagctatttgttacggagggagagtggtgaatggagcagcgggcggttatggcgt |
42341701 |
T |
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| Q |
315 |
ggcagt |
320 |
Q |
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|||||| |
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| T |
42341702 |
ggcagt |
42341707 |
T |
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