View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14433_low_1 (Length: 795)

Name: NF14433_low_1
Description: NF14433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14433_low_1
NF14433_low_1
[»] chr7 (38 HSPs)
chr7 (394-774)||(44723461-44723841)
chr7 (1-403)||(44724223-44724621)
chr7 (1-199)||(21679875-21680069)
chr7 (1-296)||(22828880-22829171)
chr7 (1-173)||(39146234-39146402)
chr7 (1-242)||(27832880-27833118)
chr7 (1-161)||(21677952-21678108)
chr7 (1-172)||(24748470-24748636)
chr7 (1-144)||(25276044-25276183)
chr7 (1-94)||(11355207-11355300)
chr7 (1-88)||(37412375-37412462)
chr7 (39-171)||(20091826-20091954)
chr7 (1-94)||(20137356-20137449)
chr7 (1-89)||(18567567-18567655)
chr7 (228-296)||(21677796-21677864)
chr7 (1-89)||(27306476-27306564)
chr7 (1-89)||(31435294-31435382)
chr7 (228-299)||(27833125-27833196)
chr7 (1-94)||(4296182-4296276)
chr7 (1-89)||(44518-44606)
chr7 (1-89)||(443549-443637)
chr7 (228-296)||(24748346-24748414)
chr7 (18-166)||(7188424-7188568)
chr7 (1-89)||(1049542-1049630)
chr7 (1-89)||(31156158-31156246)
chr7 (1-88)||(21990106-21990192)
chr7 (4-83)||(24258423-24258502)
chr7 (1-89)||(35583-35671)
chr7 (1-89)||(13099723-13099811)
chr7 (1-89)||(40836989-40837077)
chr7 (1-89)||(42331246-42331334)
chr7 (231-294)||(21679759-21679822)
chr7 (1-89)||(22251789-22251877)
chr7 (1-89)||(25542485-25542572)
chr7 (228-296)||(39146456-39146524)
chr7 (1-89)||(26804527-26804611)
chr7 (39-88)||(3677235-3677284)
chr7 (4-69)||(21592393-21592458)
[»] chr8 (35 HSPs)
chr8 (1-300)||(33541635-33541930)
chr8 (1-242)||(27107144-27107380)
chr8 (1-172)||(14477197-14477364)
chr8 (1-172)||(15185957-15186124)
chr8 (4-164)||(25952450-25952606)
chr8 (4-105)||(5372428-5372528)
chr8 (1-89)||(14419438-14419526)
chr8 (8-94)||(35872632-35872718)
chr8 (1-89)||(1225166-1225254)
chr8 (1-93)||(5622985-5623077)
chr8 (1-89)||(18810708-18810796)
chr8 (1-172)||(26775123-26775289)
chr8 (1-94)||(13858731-13858824)
chr8 (1-94)||(30480750-30480843)
chr8 (1-89)||(18812893-18812981)
chr8 (1-88)||(36865538-36865626)
chr8 (228-297)||(27107387-27107456)
chr8 (1-89)||(3886165-3886253)
chr8 (1-89)||(4424018-4424106)
chr8 (1-89)||(14807751-14807839)
chr8 (1-89)||(15072710-15072798)
chr8 (228-296)||(26774978-26775046)
chr8 (1-89)||(27826986-27827074)
chr8 (1-89)||(27829297-27829385)
chr8 (1-112)||(27910992-27911102)
chr8 (1-112)||(27957411-27957521)
chr8 (17-112)||(21482301-21482394)
chr8 (4-89)||(41382673-41382758)
chr8 (1-89)||(44720843-44720931)
chr8 (2-61)||(37214458-37214517)
chr8 (1-89)||(181537-181625)
chr8 (17-89)||(2468361-2468433)
chr8 (1-89)||(28251814-28251902)
chr8 (3-89)||(15067981-15068067)
chr8 (44-89)||(14419787-14419832)
[»] chr3 (69 HSPs)
chr3 (1-297)||(28137540-28137832)
chr3 (1-243)||(43421660-43421897)
chr3 (1-200)||(1626928-1627123)
chr3 (1-200)||(36011644-36011839)
chr3 (1-242)||(28100286-28100523)
chr3 (1-172)||(43423708-43423877)
chr3 (3-172)||(53468702-53468867)
chr3 (1-244)||(28102247-28102486)
chr3 (1-195)||(5927009-5927202)
chr3 (1-104)||(47701840-47701943)
chr3 (1-152)||(28180889-28181034)
chr3 (1-112)||(54884058-54884169)
chr3 (52-172)||(4663764-4663880)
chr3 (1-94)||(3314603-3314696)
chr3 (1-220)||(23633257-23633471)
chr3 (1-88)||(3306724-3306811)
chr3 (1-88)||(6231374-6231461)
chr3 (1-94)||(880697-880790)
chr3 (1-89)||(51943295-51943383)
chr3 (228-294)||(1627172-1627238)
chr3 (9-94)||(890024-890109)
chr3 (1-89)||(3859452-3859540)
chr3 (1-89)||(5522860-5522948)
chr3 (1-89)||(15780784-15780872)
chr3 (1-89)||(43226010-43226098)
chr3 (1-83)||(6561740-6561822)
chr3 (227-297)||(36011526-36011596)
chr3 (1-89)||(11170328-11170416)
chr3 (1-89)||(26720472-26720560)
chr3 (1-89)||(43228215-43228303)
chr3 (1-89)||(53591119-53591207)
chr3 (1-88)||(10956272-10956359)
chr3 (1-88)||(51675000-51675087)
chr3 (1-95)||(54691819-54691912)
chr3 (228-297)||(5927256-5927325)
chr3 (1-220)||(23636824-23637038)
chr3 (1-94)||(28761673-28761766)
chr3 (1-89)||(4308526-4308614)
chr3 (1-89)||(5191577-5191665)
chr3 (228-296)||(7754063-7754131)
chr3 (1-89)||(11163074-11163162)
chr3 (1-89)||(22114550-22114638)
chr3 (1-89)||(35777345-35777433)
chr3 (1-89)||(39715394-39715481)
chr3 (1-89)||(45882863-45882951)
chr3 (1-89)||(51727251-51727339)
chr3 (1-88)||(10958568-10958655)
chr3 (242-297)||(28100544-28100599)
chr3 (233-296)||(43423937-43424000)
chr3 (1-89)||(18162588-18162675)
chr3 (4-89)||(12268214-12268299)
chr3 (1-89)||(18097145-18097234)
chr3 (1-89)||(1313334-1313421)
chr3 (1-89)||(24979631-24979719)
chr3 (1-89)||(32264284-32264376)
chr3 (1-89)||(18099415-18099503)
chr3 (13-89)||(1321365-1321441)
chr3 (256-296)||(8183209-8183249)
chr3 (1-89)||(35918194-35918282)
chr3 (1-89)||(47149140-47149233)
chr3 (1-89)||(48361916-48362003)
chr3 (39-111)||(53597143-53597215)
chr3 (1-89)||(53915741-53915829)
chr3 (26-89)||(6484309-6484372)
chr3 (17-94)||(31151266-31151345)
chr3 (128-194)||(562129-562195)
chr3 (181-243)||(43423865-43423926)
chr3 (227-299)||(28102490-28102563)
chr3 (1-82)||(32219026-32219107)
[»] chr2 (37 HSPs)
chr2 (1-296)||(22163194-22163485)
chr2 (4-244)||(15539725-15539962)
chr2 (4-296)||(11739810-11740078)
chr2 (1-170)||(38019986-38020151)
chr2 (1-170)||(3022006-3022171)
chr2 (1-172)||(34979826-34979993)
chr2 (1-200)||(14837087-14837281)
chr2 (1-112)||(44289315-44289426)
chr2 (1-89)||(22407656-22407744)
chr2 (1-94)||(17849032-17849125)
chr2 (1-89)||(13910291-13910379)
chr2 (1-89)||(19504592-19504680)
chr2 (1-89)||(40032305-40032393)
chr2 (1-89)||(42064435-42064523)
chr2 (1-89)||(42452703-42452791)
chr2 (4-94)||(19007555-19007645)
chr2 (1-94)||(31733012-31733105)
chr2 (1-89)||(22287583-22287671)
chr2 (1-89)||(24162459-24162547)
chr2 (1-88)||(19502258-19502345)
chr2 (1-94)||(28196552-28196645)
chr2 (228-296)||(3021839-3021907)
chr2 (17-89)||(18800565-18800637)
chr2 (1-89)||(27104719-27104807)
chr2 (181-243)||(38019933-38019996)
chr2 (235-296)||(14836971-14837032)
chr2 (230-294)||(34980072-34980136)
chr2 (1-89)||(43623815-43623903)
chr2 (5-88)||(6264396-6264479)
chr2 (17-112)||(37963190-37963285)
chr2 (1-94)||(17848360-17848451)
chr2 (39-112)||(12342695-12342767)
chr2 (252-297)||(15539991-15540036)
chr2 (1-49)||(5377676-5377724)
chr2 (1-89)||(21520940-21521030)
chr2 (1-89)||(42923756-42923846)
chr2 (60-112)||(17897548-17897601)
[»] chr6 (43 HSPs)
chr6 (2-244)||(13039582-13039820)
chr6 (1-241)||(3630111-3630346)
chr6 (1-243)||(25477103-25477341)
chr6 (1-243)||(3632185-3632420)
chr6 (1-244)||(13057022-13057261)
chr6 (1-200)||(24338695-24338890)
chr6 (1-200)||(12161802-12161996)
chr6 (1-172)||(10584026-10584188)
chr6 (1-172)||(22490539-22490707)
chr6 (1-172)||(13870669-13870835)
chr6 (61-200)||(20220000-20220135)
chr6 (61-170)||(22114014-22114119)
chr6 (228-296)||(24338960-24339028)
chr6 (1-94)||(32447563-32447656)
chr6 (1-89)||(3390358-3390446)
chr6 (1-89)||(8995458-8995546)
chr6 (1-89)||(9019905-9019993)
chr6 (1-95)||(3233978-3234071)
chr6 (1-169)||(14466237-14466400)
chr6 (228-297)||(3630354-3630423)
chr6 (1-89)||(1072124-1072212)
chr6 (228-296)||(13039509-13039577)
chr6 (1-89)||(19227655-19227743)
chr6 (227-296)||(3632425-3632494)
chr6 (228-296)||(13056949-13057017)
chr6 (1-89)||(14507422-14507510)
chr6 (2-89)||(30729076-30729163)
chr6 (52-172)||(3028148-3028265)
chr6 (1-89)||(11983276-11983364)
chr6 (18-94)||(15346365-15346441)
chr6 (1-89)||(15532928-15533016)
chr6 (1-89)||(15541387-15541475)
chr6 (1-89)||(17852521-17852609)
chr6 (1-89)||(28241568-28241656)
chr6 (228-298)||(13870841-13870911)
chr6 (1-89)||(12195762-12195850)
chr6 (1-89)||(15530369-15530457)
chr6 (228-296)||(22490415-22490483)
chr6 (51-172)||(25466467-25466583)
chr6 (228-294)||(10583884-10583950)
chr6 (1-82)||(14459012-14459093)
chr6 (4-89)||(30034853-30034942)
chr6 (228-270)||(20219938-20219980)
[»] chr1 (53 HSPs)
chr1 (1-295)||(25251524-25251814)
chr1 (1-243)||(18839382-18839619)
chr1 (1-297)||(25248763-25249055)
chr1 (1-200)||(50248821-50249016)
chr1 (1-168)||(31489784-31489947)
chr1 (2-244)||(17323858-17324096)
chr1 (1-170)||(17186377-17186542)
chr1 (1-88)||(18307054-18307141)
chr1 (1-112)||(31423123-31423234)
chr1 (1-94)||(11457724-11457817)
chr1 (1-94)||(50076921-50077014)
chr1 (1-94)||(17318832-17318925)
chr1 (1-94)||(50079070-50079163)
chr1 (1-89)||(6756471-6756559)
chr1 (228-296)||(17323785-17323853)
chr1 (1-89)||(51749983-51750071)
chr1 (1-89)||(13215025-13215113)
chr1 (1-89)||(15823490-15823578)
chr1 (1-89)||(41646864-41646952)
chr1 (2-89)||(17324886-17324973)
chr1 (228-299)||(50249065-50249136)
chr1 (1-89)||(13761781-13761869)
chr1 (1-89)||(16226111-16226199)
chr1 (1-89)||(20302403-20302491)
chr1 (1-89)||(28207315-28207403)
chr1 (1-89)||(38925727-38925815)
chr1 (1-89)||(47451592-47451680)
chr1 (1-68)||(31425268-31425335)
chr1 (228-298)||(17186620-17186690)
chr1 (1-94)||(16428592-16428685)
chr1 (1-94)||(50307796-50307889)
chr1 (4-89)||(51752309-51752394)
chr1 (1-89)||(2949480-2949568)
chr1 (1-89)||(6822959-6823047)
chr1 (1-112)||(9241335-9241446)
chr1 (1-89)||(31735770-31735862)
chr1 (18-112)||(14183852-14183945)
chr1 (39-89)||(30790681-30790731)
chr1 (51-166)||(43104030-43104141)
chr1 (1-90)||(2617459-2617548)
chr1 (44-97)||(18800861-18800914)
chr1 (21-94)||(49495468-49495541)
chr1 (1-89)||(6995949-6996037)
chr1 (1-89)||(10400077-10400165)
chr1 (1-89)||(20291401-20291489)
chr1 (1-89)||(28998502-28998590)
chr1 (1-89)||(29004218-29004306)
chr1 (1-89)||(28842437-28842527)
chr1 (230-297)||(31489726-31489793)
chr1 (39-94)||(40133874-40133929)
chr1 (51-94)||(42922173-42922216)
chr1 (1-89)||(6823828-6823917)
chr1 (39-112)||(16431022-16431095)
[»] chr5 (38 HSPs)
chr5 (1-296)||(695631-695921)
chr5 (5-199)||(10474574-10474764)
chr5 (1-198)||(39398240-39398431)
chr5 (1-199)||(17072721-17072915)
chr5 (1-200)||(24126693-24126888)
chr5 (39-200)||(2723804-2723961)
chr5 (1-172)||(20042915-20043082)
chr5 (1-172)||(20044875-20045042)
chr5 (1-172)||(34530913-34531079)
chr5 (1-95)||(25904041-25904135)
chr5 (1-94)||(31472860-31472953)
chr5 (4-89)||(20507712-20507797)
chr5 (1-89)||(2818583-2818671)
chr5 (1-89)||(4236573-4236661)
chr5 (1-89)||(31179618-31179706)
chr5 (1-89)||(40221466-40221554)
chr5 (1-82)||(17818737-17818817)
chr5 (1-89)||(38882049-38882138)
chr5 (1-89)||(2174863-2174951)
chr5 (1-89)||(25921720-25921808)
chr5 (1-89)||(31542679-31542767)
chr5 (1-89)||(31545024-31545112)
chr5 (5-89)||(37706031-37706115)
chr5 (240-293)||(2723698-2723751)
chr5 (236-297)||(20044756-20044817)
chr5 (1-89)||(6756438-6756526)
chr5 (1-89)||(12556170-12556258)
chr5 (1-89)||(21947971-21948058)
chr5 (9-89)||(26098506-26098586)
chr5 (1-89)||(39854428-39854515)
chr5 (1-89)||(41585953-41586041)
chr5 (17-94)||(36208519-36208597)
chr5 (235-296)||(24126579-24126640)
chr5 (1-89)||(10529346-10529434)
chr5 (1-89)||(26097677-26097765)
chr5 (1-49)||(27912520-27912568)
chr5 (231-270)||(42770523-42770562)
chr5 (1-89)||(16776101-16776190)
[»] chr4 (54 HSPs)
chr4 (1-296)||(38270233-38270543)
chr4 (1-172)||(2891235-2891403)
chr4 (1-209)||(3937456-3937659)
chr4 (1-200)||(6132764-6132958)
chr4 (1-172)||(18409594-18409759)
chr4 (206-297)||(47564497-47564588)
chr4 (8-94)||(24446833-24446919)
chr4 (1-94)||(12396092-12396185)
chr4 (1-94)||(12401054-12401147)
chr4 (4-94)||(19095875-19095965)
chr4 (228-297)||(6132646-6132715)
chr4 (1-89)||(11434953-11435041)
chr4 (1-89)||(51015244-51015332)
chr4 (1-94)||(38928425-38928518)
chr4 (1-89)||(5198418-5198506)
chr4 (1-89)||(22044637-22044725)
chr4 (1-89)||(22802981-22803069)
chr4 (1-89)||(24888794-24888882)
chr4 (1-89)||(36378290-36378378)
chr4 (4-88)||(37313316-37313400)
chr4 (1-89)||(40637072-40637160)
chr4 (1-89)||(47274725-47274813)
chr4 (1-89)||(48486317-48486405)
chr4 (1-89)||(36919832-36919922)
chr4 (1-94)||(33415734-33415827)
chr4 (1-94)||(41997485-41997578)
chr4 (1-89)||(619694-619782)
chr4 (1-89)||(5100995-5101083)
chr4 (1-89)||(9174393-9174481)
chr4 (1-89)||(22046932-22047020)
chr4 (1-89)||(22801109-22801197)
chr4 (1-89)||(24878987-24879075)
chr4 (1-89)||(24880449-24880537)
chr4 (1-89)||(31849846-31849934)
chr4 (1-89)||(40091662-40091750)
chr4 (1-89)||(7941317-7941407)
chr4 (1-87)||(9176721-9176807)
chr4 (60-164)||(31983837-31983937)
chr4 (1-89)||(6764837-6764925)
chr4 (1-89)||(47868399-47868487)
chr4 (1-88)||(56030443-56030530)
chr4 (247-297)||(27498964-27499014)
chr4 (1-89)||(2485119-2485208)
chr4 (17-89)||(18537733-18537806)
chr4 (1-89)||(37089618-37089709)
chr4 (1-89)||(14633318-14633405)
chr4 (1-89)||(16453307-16453395)
chr4 (1-89)||(16934390-16934478)
chr4 (140-172)||(27499076-27499108)
chr4 (1-89)||(44600085-44600173)
chr4 (1-112)||(15032784-15032894)
chr4 (1-89)||(47210987-47211081)
chr4 (1-83)||(19322701-19322782)
chr4 (44-89)||(8756540-8756585)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-102)||(35580-35680)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-94)||(79807-79900)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-87)||(79140-79226)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-89)||(3950-4038)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-89)||(2833-2921)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-89)||(11720-11808)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-89)||(14972-15060)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-89)||(41730-41818)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-89)||(1078-1166)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-89)||(6152-6240)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-89)||(183887-183974)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-48)||(2036-2083)
[»] scaffold0224 (1 HSPs)
scaffold0224 (51-94)||(16115-16158)


Alignment Details
Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 394 - 774
Target Start/End: Complemental strand, 44723841 - 44723461
Alignment:
Q  394 caaatccatgtgcattcttacacctctgggatgacgttcatggtaaaaaatttagatgnnnnnnncacaggatagttatttatgttgaatttgatgcatt 493  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||| |||||||||||||||||||| ||||    
T  44723841 caaatccatgtgcattcttacacctttgggatgacgttcatggtaaaaaatttagatgtttttttcacaggataattatttatgttgaatttgattcatt 44723742  T
Q  494 tgtattttgtcgaaaaataatgagattccattaagaaaagtcagtacaacaggcttactagctaaatacaccaatcagatacagtgtcaaaaacgattag 593  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  44723741 tgtattttgtcaaaaaataatgagattccattaataaaagtcagtacaacagtcttactagctaaatacaccaatcagatacagtgtccaaaacgattag 44723642  T
Q  594 cctaaaattaacatcactcaaaactatgagattgtgcacgtatttggtccacacctgaccatgagccatgatgattggtgcaggcttccaattcatggcc 693  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44723641 cctaaaattaacatcactcaaaactatgagattgtgcacgtatttggtccacacctgaccatgagccatgatgattggtgcaggcttccaattcatggcc 44723542  T
Q  694 attttcattctatattccaactctaggtatctgcaattccattctgcagtgaatgtgtggaaaaggcttcactaattattg 774  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44723541 attttcattctatattccaactctaggtatctgcaattccattctgcactgaatgtgtggaaaaggcttcactaattattg 44723461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1 - 403
Target Start/End: Complemental strand, 44724621 - 44724223
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44724621 tagttttgttgttgcctttctaaacccttgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 44724522  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||| ||||||   ||||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  44724521 aaactagaacaa---atctaggtccgaaaa-tacgtttctgttttattttctgctatcaaaatcagccaccgtgctcaccaaatcggccaccgatttttg 44724426  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaaaat 300  Q
    | ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||      
T  44724425 tcgaatcaacagacaaaaaaccagagttgaaaatcggccaccgattttcagcttccagaatttcaattttttcaattttgaggcacgttcacaacaaatc 44724326  T
Q  301 acactctgatcagagtgtaaaatggagctgaactaaagaaaaaattgtttaaaaaatatcatttaccattgtttcagttatggagctttgtttcaaatcc 400  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44724325 acactctgatcagagtgtaaaatggagctgaactaaaggaaaaattgtttaaaaaatatcatttaccattgtttcagttatggagttttgtttcaaatcc 44724226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21680069 - 21679875
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  21680069 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaatt 21679970  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg--tgctcaccaaatcggccaccgatttt 198  Q
    ||||||||   ||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||| |  ||||||  |||||||||||| |||||    
T  21679969 aaactgga---acaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggccactgaatgctca--aaatcggccaccaatttt 21679876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 22828880 - 22829171
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||||| | |||||||   |||||||||||||||||| ||||   |||    
T  22828880 tagttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagtatccctcata 22828979  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgct-caccaaatcggccaccgattttt 199  Q
    |||||||   |||||||||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||||   | |||| | |||  |||| ||||||    
T  22828980 aaactgg---aacaaatctaggcccg-aaaatacgtttctgttttatttcctgctgttaaaatcggccaccgaattgcacc-attcgaacaccaattttt 22829074  T
Q  200 gtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
     | |||||||||||||||||| |||   | |||||||||||| ||||||| |||||||||||| |||||| |||||||| ||| |||||||||||||    
T  22829075 ctcgaaccaacagacaaaaaaccagcacttaaaatcggccactgattttctacttccagaattccaatttcttcaattttgagtcactttcacaaca 22829171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 39146234 - 39146402
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||| || |||||| |||||||| ||  ||||  ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  39146234 tagttttgttgttgtctatctaaacccttgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaagaatcctcaata 39146333  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgt 173  Q
    ||| |||   |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  39146334 aaattgg---aacaaatctaggtctg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgt 39146402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 27832880 - 27833118
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtacc-ctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaat 99  Q
    ||||| ||||||||||||| |||| |||||||| ||  || || |||| | |||||| | ||||||||  | |||||||||||||||||||||| |||||    
T  27832880 tagttctgttgttgcctttttaaacccttgtttcagctccactctatcacaaggtttgctctgatacacaacctatatttatagtaaaagaatcatcaat 27832979  T
Q  100 aaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgattttt 199  Q
    ||||||||   |||||||||||| ||| ||||||| ||| |||||||||||||||||||||||| ||||||||  |||   | |||||||||||||||||    
T  27832980 aaaactgg---aacaaatctaggcccg-aaaatacatttctgttttattttctgctgtcaaaattggccaccgaactccatatatcggccaccgattttt 27833075  T
Q  200 gtggaaccaacagacaaaaaatcagagttgaaaatcggccacc 242  Q
       |||||||||||||||||| ||||||  |||||| ||||||    
T  27833076 tccgaaccaacagacaaaaaaccagagtgcaaaatcagccacc 27833118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 21678108 - 21677952
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||| ||||||||||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21678108 tagttttgatgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaagaatcctcaata 21678009  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaa 161  Q
    ||||||    |||||||||| | ||| ||||||  ||| ||||||||||||||||||||||    
T  21678008 aaactg---aaacaaatctaagcccg-aaaatatttttttgttttattttctgctgtcaaa 21677952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 24748636 - 24748470
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||| |||||| ||||||||| |||||||| ||  |||| ||  || | ||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  24748636 tagttttattgttgtctttctaaacccttgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaagaatc-tcaata 24748538  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    ||||||||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  24748537 aaactggaacaa---atctagggccgaaaa-tacgtttctgttttattttctgctgtcaaaattggccaccg 24748470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25276183 - 25276044
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||||  |||||||||  |||| |||||| | |||| | |||||||||    ||||||||||||||||||||||||||||    
T  25276183 tagttttgttgttgcctttctaaattattgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaagaatcctcaata 25276084  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttt 144  Q
    ||||||||   ||||||||||| ||| |||||||||||||||||    
T  25276083 aaactgga---acaaatctaggcccg-aaaatacgtttatgttt 25276044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11355300 - 11355207
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||   |||||||||||||||||||||||    
T  11355300 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaagaatcc 11355207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37412375 - 37412462
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||||| ||||||| |||||||| ||  |||||||||||||||||||| ||||| |||  ||||||||||||||||||    
T  37412375 tagttttgttgttgccattctaaacccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 20091826 - 20091954
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgttt 138  Q
    |||| |||||| |||||||| |||||| ||  ||||||||||||||||||| ||||   |||||| ||||||||   ||||||| | ||||| |||||||    
T  20091826 ccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagtatccctcataaaattggaacaa---atctaggcctgaaaa-tacgttt 20091921  T
Q  139 atgttttattttctgctgtcaaaatcggccacc 171  Q
     |||||||||| |||||||||||||||||||||    
T  20091922 ctgttttatttcctgctgtcaaaatcggccacc 20091954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20137356 - 20137449
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   | |||||||||||||||||||||    
T  20137356 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaagaatcc 20137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18567655 - 18567567
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  18567655 tagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 18567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 21677864 - 21677796
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||||||||||||    
T  21677864 tgaaaatcggccaccgattttcagcttccaggattccaatttcttcaattttgaggcactttcacaaca 21677796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 27306476 - 27306564
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  27306476 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 27306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31435294 - 31435382
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  31435294 tagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 31435382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 27833125 - 27833196
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaaaa 299  Q
    ||||||||||||||||||||||  |||||||||||  ||||| |||||||| ||||||||||||||||||||    
T  27833125 tgaaaatcggccaccgattttctgcttccagaattctaatttcttcaattttgaggcactttcacaacaaaa 27833196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4296182 - 4296276
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac-aatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||||||||||||| ||| ||||||||||||||||||| ||||    
T  4296182 tagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaagcatcc 4296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44606 - 44518
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  44606 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 44518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 443637 - 443549
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| | |||||||||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  443637 tagttttgttgttgccattctaaaccattgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 443549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 24748414 - 24748346
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    |||||||| |||||||||||||| |||||||||||  |||||||||||||| ||| |||||||||||||    
T  24748414 tgaaaatcagccaccgattttcagcttccagaattctaattttttcaattttgagtcactttcacaaca 24748346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 7188568 - 7188424
Alignment:
Q  18 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaat 117  Q
    ||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||   |||||| |||   |||||||    
T  7188568 ttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattgg---aacaaat 7188472  T
Q  118 ctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcgg 166  Q
    ||  | || ||||||||||||||||| |||||||| ||| |||| ||||    
T  7188471 ctcag-cccaaaaatacgtttatgttatattttctcctgacaaattcgg 7188424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1049542 - 1049630
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | || ||||||  |||||||||||||||||||    
T  1049542 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 1049630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31156158 - 31156246
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31156158 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaag 31156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21990192 - 21990106
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| ||||||||||||||| ||||| |||  ||||||||||||||||||    
T  21990192 tagttttgttgttgtcattctaaacccttgtttcagc-ccctctatctccaggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 24258502 - 24258423
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 83  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||||||||| | ||||||||||||    
T  24258502 ttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgatacaaaacctatatttatag 24258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35671 - 35583
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| |||||| || |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  35671 tagttttgttgttgtctttctgaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 35583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13099723 - 13099811
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| |   |||| |||||| ||||||||  |||| |||  |||||||||||||||||||    
T  13099723 tagttttgttgttgccattctaaacccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaag 13099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40836989 - 40837077
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||| ||| ||  ||||  |||||||  ||| | |||||||||  |||||||||||||||||||    
T  40836989 tagttttgttgttgcctttctaaacccttctttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaag 40837077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42331246 - 42331334
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  42331246 tagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 42331334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 21679822 - 21679759
Alignment:
Q  231 aaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaa 294  Q
    ||||||||||||||| |||| ||||||||||| |||||| || | ||| |||||||||||||||    
T  21679822 aaatcggccaccgatgttcagcttccagaattccaatttcttaatttttgaggcactttcacaa 21679759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22251789 - 22251877
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||||||||  ||||||| ||   ||| |||||| | |||||| ||||| |||  | |||||||||||||||||    
T  22251789 tagttttgttgttgcctttctaaactcttgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaag 22251877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25542572 - 25542485
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||| |||||||||| | |||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  25542572 tagttttgttgttacctttctaaacctttgtttcagc-ccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25542485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 39146456 - 39146524
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||| |||||| |||||  |||||| |||| |||||| |||||||| ||| |||||||||||||    
T  39146456 tgaaaatcgaccaccggttttctgcttccaaaattccaatttcttcaattttgagtcactttcacaaca 39146524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26804611 - 26804527
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |    ||||  |||||||||||||||||||    
T  26804611 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaag 26804527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 3677284 - 3677235
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||| |||||||| |||||| ||||| ||| |||||||||||||||||||    
T  3677284 ccctctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 21592393 - 21592458
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaat 69  Q
    |||||||||||| |||||||| | |||||| ||  |||| |||||| | |||||||||||||||||    
T  21592393 ttttgttgttgcatttctaaacctttgtttcagccccctctatctcaaagtttacactgatacaat 21592458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 6e-98; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 33541635 - 33541930
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33541635 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 33541734  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||| ||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  33541735 aaactcgaacaa---atctaggcccgaaaa-tacgtttctgttttattttctgctgtcaaaatcggccatcgtgctcaccaaatcagccaccgatttttg 33541830  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaaaat 300  Q
      |||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||| |||||| || ||||| |||||||||||||||||||||    
T  33541831 ccgaaccaacagacaaaaaaacaaagtccaaaatcggccaccgattttcagcttccagaattccaatttctttaattttgaggcactttcacaacaaaat 33541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 27107144 - 27107380
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  27107144 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaagaatcctcaata 27107243  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||| ||    | ||||||||||||||||||||||    
T  27107244 aaactgg---aacaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggccatcgaatgctccaaatcggccaccgatttttg 27107339  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccacc 242  Q
      ||||||| || | | ||| ||||||  |||||||||||||    
T  27107340 ccgaaccaa-aggccataaaacagagtccaaaatcggccacc 27107380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 14477364 - 14477197
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| |   |||| |||||| |||||| | |||||||||   |||||||||||||||||||||||||||||    
T  14477364 tagttttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagaatcctcaata 14477265  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||   || ||||||||  ||| ||||||||||| | ||||||||  |||||||||||||||||||||    
T  14477264 aaactgg---aataaatctagacccg-aaaatacgtttctattttatttcttgctgtcaaaatcggccaccg 14477197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 15185957 - 15186124
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||| ||  ||||||||| |||||||| |||  ||| |||||| |||||||| |||||||||  | ||||||||||||||||| ||||   |||    
T  15185957 tagttttgttattttctttctaaacccttgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagtatccctcata 15186056  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    ||| |||   |||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  15186057 aaattgg---aacaaatctaggcccg-aaaatacgtttctgttttatttcctgctgtcaaaatcggccaccg 15186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 25952606 - 25952450
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 103  Q
    |||| |||||||||||||||| |||||||| ||  |||| |||||| |||||| | |||||||||    |||||||||||||||||||||||||||||||    
T  25952606 ttttattgttgcctttctaaacccttgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaagaatcctcaataaaa 25952507  T
Q  104 ctggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatc 164  Q
    |||||   ||||||||| | ||| ||||||||||| |  ||||||| ||| ||||||||||    
T  25952506 ctgga---acaaatctaagcccg-aaaatacgtttcttgtttatttcctgttgtcaaaatc 25952450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 5372428 - 5372528
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 103  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| || |||||||||||||||| |||||| ||||||||||||||||||||||| ||    
T  5372428 ttttgttgttgcctttctaaacccttgtttcagc-ccctctatctcaagatttacactgatacaatgtctataattatagtaaaagaatcctcaatagaa 5372526  T
Q  104 ct 105  Q
    ||    
T  5372527 ct 5372528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14419438 - 14419526
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||| |||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  14419438 tagtttttttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 14419526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 35872632 - 35872718
Alignment:
Q  8 gttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  35872632 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 35872718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1225254 - 1225166
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| |||||||||||||||||||  ||||||||||||||||||    
T  1225254 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaag 1225166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5622985 - 5623077
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatc 93  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||  ||||||||| | ||||||||||||||||||||||    
T  5622985 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaagaatc 5623077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18810796 - 18810708
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | ||||||||| ||||||||||||||||||||    
T  18810796 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaag 18810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 26775289 - 26775123
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag-aatcctcaat 99  Q
    |||| ||||||||||||||||||| |||||||| ||  |||| |||||| |||||| | |||||||||   |||||||||||||||||| || |||| ||    
T  26775289 tagtattgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagtaaccctc-at 26775191  T
Q  100 aaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||| ||    ||||||| ||| ||  |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  26775190 aaaattg---taacaaatatagctc--aaaaatacgtttctgttctatttcctgctgtcaaaatcggccaccg 26775123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13858731 - 13858824
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| |   |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  13858731 tagttttgttgttgcctttctaaacccttgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatcc 13858824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30480750 - 30480843
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| |   || | |||||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  30480750 tagttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatcc 30480843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18812981 - 18812893
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||   ||| |||||||| |||| | ||||||||| ||||||||||||||||||||    
T  18812981 tagttttgttgttgcctttctaaacccttgtttcagcctcctctatctccaagtttgctctgatacaagatctatatttatagtaaaag 18812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36865626 - 36865538
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttaca-ctgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||  ||||||||| |||||||||| ||||||||||||||||||    
T  36865626 tagttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 27107387 - 27107456
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    ||||||||||||| ||||||||| |||||||||||  ||||| |||||||| ||||||||||||||||||    
T  27107387 tgaaaatcggccatcgattttcagcttccagaattctaatttcttcaattttgaggcactttcacaacaa 27107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3886165 - 3886253
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  3886165 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 3886253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4424106 - 4424018
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||||||||||||||||| ||  |||| |||||| | |||| | |||||||||  ||| |||||||||||||||    
T  4424106 tagttttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaag 4424018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14807839 - 14807751
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  14807839 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14807751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15072798 - 15072710
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15072798 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 26775046 - 26774978
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||||||||||||||  || |||||||| |||||| |||||||| |||||||||||||||||    
T  26775046 tgaaaatcggccaccgattttctgctaccagaattccaatttcttcaattttgaggcactttcacaaca 26774978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27827074 - 27826986
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  27827074 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27826986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27829385 - 27829297
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  27829385 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27829297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 27911102 - 27910992
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| || |||||||| ||||||| |||  | |||    
T  27911102 tagttttgttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatctcccata 27911004  T
Q  101 aaactggaacaa 112  Q
    ||| ||||||||    
T  27911003 aaattggaacaa 27910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 27957521 - 27957411
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| || |||||||| ||||||| |||  | |||    
T  27957521 tagttttgttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatctcccata 27957423  T
Q  101 aaactggaacaa 112  Q
    ||| ||||||||    
T  27957422 aaattggaacaa 27957411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 21482394 - 21482301
Alignment:
Q  17 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 112  Q
    |||||||| |||||||| ||| | || |||||| | |||||| |||||||||  |||||||||||||||||||||||||  | |||||||||||||    
T  21482394 tttctaaacccttgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaagaatcct--aaaaaactggaacaa 21482301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 41382758 - 41382673
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||| | ||||||| |||||||||||  || | |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  41382758 ttttgttgttgtcattctaaacccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 41382673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44720931 - 44720843
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||| ||  |||||||||||||||||||    
T  44720931 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaag 44720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 37214458 - 37214517
Alignment:
Q  2 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacact 61  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||||    
T  37214458 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacact 37214517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 181625 - 181537
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||| |||||||| ||||||  |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  181625 tagttttattgttgccattctaagcccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 181537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 2468361 - 2468433
Alignment:
Q  17 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  2468361 tttctaaatccttgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 2468433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28251814 - 28251902
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| |   | || |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  28251814 tagttttgttgttgccattctaaacccttgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaag 28251902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 15068067 - 15067981
Alignment:
Q  3 gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||| |||||||| ||  || | |||||| | |||||   ||||||||  | |||||||||||||||||    
T  15068067 gttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaag 15067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 14419787 - 14419832
Alignment:
Q  44 tatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||| |||||||| |||||||||| ||||||||||||| |||||    
T  14419787 tatctcaaggtttaccctgatacaatgtctatatttatagcaaaag 14419832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 4e-77; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 28137540 - 28137832
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||    ||||||||||||||||||||||||||||    
T  28137540 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaagaatcctcaata 28137639  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    | ||||||||| | | ||||||||    
T  28137640 aaactggaacaa---atctaggcccgaaaa-tacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctccaaatcggtcgctgatttttg 28137735  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
      ||||||| | |||||||| ||||||  |||||||||||||||||||| |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  28137736 ccgaaccaataaacaaaaaaccagagtgcaaaatcggccaccgattttctacttccagaattccaatttcttcaattttgaggcactttcacaacaa 28137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 43421660 - 43421897
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| |   || | |||||| ||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  43421660 tagttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaaaagtcctcaata 43421759  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||||||   ||||||| || |||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  43421760 aaactggaacaa---atctaggccc-aaaaatacgttc-tattttattttctgctgtcaaaatcggccaccgcgctcaccaaatcggccactgatttttg 43421854  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 243  Q
      |||||||||||||||||| ||||||  ||||||||||||||    
T  43421855 ccgaaccaacagacaaaaaaacagagtccaaaatcggccaccg 43421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 1626928 - 1627123
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  1626928 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcatcaata 1627027  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   ||||||||||||  || ||||||||||| ||||||||||| |||||||||| || |||||||    | ||||||||||||||||||||||    
T  1627028 aaactgg---aacaaatctaggctcg-aaaatacgtttctgttttattttttgctgtcaaagtctgccaccgaatgctccaaatcggccaccgatttttg 1627123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 36011839 - 36011644
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||| ||||||| |||||||||||||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  36011839 tagtttcgttgttgtctttctaaatccttgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaata 36011740  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||   ||||||||||| ||| ||||||||||| ||||||||||| || ||||||||||| |||||     | ||||||||||||||||||||||    
T  36011739 aaactgga---acaaatctaggcccg-aaaatacgtttctgttttattttatgttgtcaaaatcgaccacctaatgctccaaatcggccaccgatttttg 36011644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 28100286 - 28100523
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||| |||||||| |||||||| ||  |||| |||||| ||| |||| |||||||||    |||||||||||||||||||||||| |||    
T  28100286 tagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaagaatcctctata 28100385  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||||||||||     | ||||||||||| ||||||||||    
T  28100386 aaactgg---aacaaatccaggcccg-aaaatacgttagtgttttattttctgctgtcaaaatcggccaccaaatgctccaaatcggccgccgatttttg 28100481  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccacc 242  Q
      ||||||||  |||||||| ||||||  |||||||||||||    
T  28100482 ccgaaccaacgaacaaaaaaccagagtgcaaaatcggccacc 28100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 43423708 - 43423877
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| | |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  43423708 tagttttgttgttgcctttctaaacccttgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaagagtcctcaata 43423807  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtc-aaaatcggccaccg 172  Q
    |||||||   |||||||||||| || |||||||||||| | ||||||||| ||||||| ||||||||||||||    
T  43423808 aaactgg---aacaaatctaggcccaaaaaatacgtttctattttattttttgctgtcaaaaatcggccaccg 43423877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 53468702 - 53468867
Alignment:
Q  3 gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaa 102  Q
    |||||||||||||| ||||||| |||||||| ||  |||| |||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53468702 gttttgttgttgccattctaaacccttgtttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaa 53468801  T
Q  103 actggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    | |||   |||||||||||| ||| |||||| |||| |||||||||||||| ||| ||||||||||||||    
T  53468802 aatgg---aacaaatctaggcccg-aaaatatgtttctgttttattttctgttgttaaaatcggccaccg 53468867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 28102247 - 28102486
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||| |||| || ||||||    |||||||||||||||||||||||| |||    
T  28102247 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaagaatcctctata 28102346  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||||||||| |    | |||||||  |  |||||||||     
T  28102347 aaactgg---aacaaatccaggcccg-aaaatacgttagtgttttattttctgctgtcaaaatcggccactgaatgctccaaatcaactgccgatttttt 28102442  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 244  Q
      |||||||||||||||||| | ||||  |||||||||||||||    
T  28102443 ccgaaccaacagacaaaaaacccgagtgcaaaatcggccaccga 28102486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 5927009 - 5927202
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||| |||||||| |||||||| ||  | || |||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  5927009 tagttttgttgttgcatttctaaacccttgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaagaatcttcaata 5927108  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattt---tctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgat 195  Q
    ||  |||   |||||||||||| ||| |||||| |||| ||||||||||     ||||  ||||||||||||||||||||||||||||||||| ||||    
T  5927109 aacttgg---aacaaatctagg-ccgtaaaatatgtttttgttttatttcaccgtgctcacaaaatcggccaccgtgctcaccaaatcggccatcgat 5927202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47701840 - 47701943
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47701840 tagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 47701939  T
Q  101 aaac 104  Q
    ||||    
T  47701940 aaac 47701943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 28181034 - 28180889
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||| ||||||||| |  | ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28181034 tagttttgttgttgtctttctaaacc--tatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 28180937  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttct 152  Q
    ||||||||   ||||||| ||| ||| ||||||||||| | |||||||||||    
T  28180936 aaactgga---acaaatcgaggcccg-aaaatacgtttctattttattttct 28180889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 54884169 - 54884058
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||  ||  |||| |||||| ||||||||| |||| |||| | ||||||||| ||||||||||||||||||    
T  54884169 tagttttgttgttgcctttctaaacccttgttcgagctccctctatctcaaggtttacaatgatccaatgtttatatttatggtaaaagaatcctcaata 54884070  T
Q  101 aaactggaacaa 112  Q
    ||| ||||||||    
T  54884069 aaattggaacaa 54884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 4663880 - 4663764
Alignment:
Q  52 ggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttc 151  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||   | |||||||||| | ||  ||||||||||| ||||||||||||    
T  4663880 ggtttactctgatacaatgtctatatttatagtaaaagaatcttcaataaaact---agaacaaatctaag-cctgaaaatacgtttctgttttattttc 4663785  T
Q  152 tgctgtcaaaatcggccaccg 172  Q
    | |||| ||||||||||||||    
T  4663784 tactgtaaaaatcggccaccg 4663764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3314696 - 3314603
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||| |||||||||| |||| ||| ||  |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  3314696 tagttttgttgttacctttctaaacccttatttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcatcc 3314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 23633471 - 23633257
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||| |||||| ||| |||||||||||||||||  | || |||||| |||||||| |||||||||  ||||||||||||||||||| ||||   |||    
T  23633471 tagttttcttgttggctt-ctaaatccttgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcata 23633373  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||| |||   ||||||||||||  || ||||||||||| |||| |||||||||||| |||| |||| | |||   ||  | | |||||||||||||||||    
T  23633372 aaattgg---aacaaatctaggctcg-aaaatacgtttctgttatattttctgctggcaaattcggaccccgaattcctccattcggccaccgatttttg 23633277  T
Q  201 tggaaccaacagacaaaaaa 220  Q
      |||||||||||| |||||    
T  23633276 ccgaaccaacagacgaaaaa 23633257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3306811 - 3306724
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    ||||||||||||||  |||||||| |||||||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3306811 tagttttgttgttgtatttctaaacccttgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6231461 - 6231374
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    ||||||||||||||||||||||||||||||||| ||  | || |||||| || |||||||||||||||| ||||||||||||||||||    
T  6231461 tagttttgttgttgcctttctaaatccttgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 880697 - 880790
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||| |||||||  ||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  880697 tagttttgttgttgccattctaaactcttgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 880790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51943383 - 51943295
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| | |||||| || ||||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  51943383 tagttttgttgttgcctttctaaacctttgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 51943295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 228 - 294
Target Start/End: Original strand, 1627172 - 1627238
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaa 294  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||    
T  1627172 tgaaaatcggccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaa 1627238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 890024 - 890109
Alignment:
Q  9 ttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||| ||||||| |||||||| ||   ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  890024 ttgttgccattctaaacccttgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcatcc 890109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3859540 - 3859452
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  3859540 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 3859452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5522860 - 5522948
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  5522860 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 5522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15780872 - 15780784
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||||| |||||| |||||||||  |||||||||||||||||||    
T  15780872 tagttttgttgttgccattctaaacccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaag 15780784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43226098 - 43226010
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||||| ||||    
T  43226098 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaag 43226010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6561822 - 6561740
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 83  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  |||||||||||||    
T  6561822 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 36011596 - 36011526
Alignment:
Q  227 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    |||||||| ||||||||||||||| |||||||| || |||||| |||||||| ||||||||||||||||||    
T  36011596 ttgaaaattggccaccgattttcaccttccagatttccaatttcttcaattttgaggcactttcacaacaa 36011526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11170416 - 11170328
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  11170416 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 11170328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26720560 - 26720472
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||| ||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  26720560 tagttttgttgttgcctttctaaacccttatttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 26720472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43228303 - 43228215
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||||| ||||    
T  43228303 tagttttgttgttgcctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaag 43228215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 53591207 - 53591119
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| |||||||||  ||||||| ||   ||| |||||| ||||||||||| ||||||| |||||||||||||||||||    
T  53591207 tagttttgttgttgtctttctaaactcttgtttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaag 53591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10956272 - 10956359
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| ||||| || |||||| |||||||||  ||||||||||||||||||    
T  10956272 tagttttgttgttgccattctaaacccttgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 10956359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51675000 - 51675087
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| | ||||||| ||||||||  ||||||||||||||||||    
T  51675000 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 54691819 - 54691912
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcct 95  Q
    |||||||||||| ||||||||||| ||||||||||   |||| |||||  |||||||| |||||||||   ||||||||||||||||||||||||    
T  54691819 tagttttgttgtcgcctttctaaaaccttgttttacc-ccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagaatcct 54691912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 5927256 - 5927325
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    |||||||| |||||||||||||| |||||| |||| |||||| ||||||||  |||||||||||||||||    
T  5927256 tgaaaatcagccaccgattttcagcttccaaaattccaatttcttcaattttaaggcactttcacaacaa 5927325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 23637038 - 23636824
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||| |||||| ||| ||||| |||||||||||   ||| |||||| |||||||| |||||||||  | |||||||||| |||||  ||||   |||    
T  23637038 tagttttcttgttggctt-ctaaacccttgttttagcctcctctatctcaaggtttactctgatacaaagtatatatttatattaaaattatccctcata 23636940  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||| ||    |||||||||||| |||||||||| |||| |||| ||||||||||||  ||| |||| | |||   ||  | | |||||||||||||||||    
T  23636939 aaattg---aaacaaatctagg-ccgaaaaatatgtttctgttatattttctgctggaaaattcgggccccgaattcctccattcggccaccgatttttg 23636844  T
Q  201 tggaaccaacagacaaaaaa 220  Q
      ||||||||||||||||||    
T  23636843 ctgaaccaacagacaaaaaa 23636824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 28761673 - 28761766
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||| ||||||||| |||||||| |   |||| |||||| |||||||| ||||| |||  ||||||||||||||||||| ||||    
T  28761673 tagttttgttgttgtctttctaaacccttgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagtatcc 28761766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4308526 - 4308614
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  4308526 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 4308614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5191665 - 5191577
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| |   |||||||  |||||||||||||||||||    
T  5191665 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaag 5191577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 7754131 - 7754063
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||||| ||||||| | ||||||||||| |||||| |||||||| ||| |||||||||||||    
T  7754131 tgaaaatcggccagcgatttttagcttccagaattccaatttcttcaattttgagccactttcacaaca 7754063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11163162 - 11163074
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  ||||||||||| |||||||    
T  11163162 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaag 11163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22114550 - 22114638
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||| ||||||||||||| |||||||| ||  || | |||||||| |||| | |||||||||  |||||||||||||||||||    
T  22114550 tagttttgtttttgcctttctaaacccttgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 22114638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35777433 - 35777345
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||| |||||||||||||||||||    
T  35777433 tagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 35777345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39715481 - 39715394
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||| |||||||| |||||| |||| ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  39715481 tagttttggtgttgcctctctaaacccttatttcagc-ccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 39715394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 45882951 - 45882863
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| ||||||   ||||||  ||||||||  |||||||||||||||||||    
T  45882951 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaag 45882863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 51727251 - 51727339
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  51727251 tagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 51727339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10958568 - 10958655
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||  | |||||| |||||||||  ||||||||||||||||||    
T  10958568 tagttttgttgttgccattctaaacccttgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaa 10958655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 28100544 - 28100599
Alignment:
Q  242 cgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    |||||||| |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  28100544 cgattttctacttccagaattccaatttcttcaattttgaggcactttcacaacaa 28100599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 43423937 - 43424000
Alignment:
Q  233 atcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||| ||||| ||| |||||||| |||||| |||||||| |||||||||||||||||    
T  43423937 atcggccaccggttttctactaccagaattccaatttcttcaattttgaggcactttcacaaca 43424000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18162675 - 18162588
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacac-tgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| |   |||| |||||||| |||||| | ||||||||  |||||||||||||||||||    
T  18162675 tagttttgttgttgcctttctaaacccttgtttca--tccctctatctccaagtttactcatgatacaaggtctatatttatagtaaaag 18162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 12268214 - 12268299
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||| |||||||||  ||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  12268214 ttttgttgttgtctttctaaactcttgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaag 12268299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18097145 - 18097234
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctc-caggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||| || ||||||  ||||||||  |||||||||||||||||||    
T  18097145 tagttttgttgttgccattctaaacccttgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaag 18097234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1313421 - 1313334
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| || |||| |||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  1313421 tagttttgttgttgccattgtaaa-ccttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 1313334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24979719 - 24979631
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  | |||||||||||| ||||    
T  24979719 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaag 24979631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32264284 - 32264376
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccagg----tttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |    ||||| |||||||||  |||||||||||||||||||    
T  32264284 tagttttgttgttgcctttctaaacccttgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaag 32264376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18099415 - 18099503
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctc-caggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||| || |||||| |||||||||  |||||| ||||||||||||    
T  18099415 tagttttgttgttgccattctaaacccttgtttcagccccctctatctctcaagtttactctgatacaaggtctata-ttatagtaaaag 18099503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 1321441 - 1321365
Alignment:
Q  13 tgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 1321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 8183209 - 8183249
Alignment:
Q  256 cagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  8183209 cagaatttcaatttcttcaattttgaggcactttcacaaca 8183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35918194 - 35918282
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |  ||| |  ||||||||  |||||||||||||| ||||    
T  35918194 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaag 35918282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47149140 - 47149233
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctcc----aggtttaca-ctgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||    |||  |||| |||||||||  |||||||||||||||||||    
T  47149140 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaaggtctatatttatagtaaaag 47149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48361916 - 48362003
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  48361916 tagttttgttgttgtcattctaaa-ccttgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaag 48362003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 53597215 - 53597143
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaaca 111  Q
    |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||   |||||| |||||||    
T  53597215 ccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatccctcataaaattggaaca 53597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 53915741 - 53915829
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | | ||||| |||||||| ||  |||| |||||  |||||||| ||||| |||  |||||||||||||||||||    
T  53915741 tagttttgttgttgtcatcctaaacccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaag 53915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 6484372 - 6484309
Alignment:
Q  26 ccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||| ||  |||| |||||| |||||||||||||||||||  |||||||||||| |||||    
T  6484372 ccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaag 6484309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 31151345 - 31151266
Alignment:
Q  17 tttctaaatccttgtttt-agtaccctatatctccaggtttaca-ctgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||| ||||||||| ||  |||| |||||| ||||||||| |||||||||  ||||||||||||||||||| ||||    
T  31151345 tttctaaacccttgttttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaagcatcc 31151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 562129 - 562195
Alignment:
Q  128 aaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccga 194  Q
    ||||||||||| |||||||||| ||||| ||||| |||||||||| |||  |||| | |||||||||    
T  562129 aaaatacgtttctgttttatttcctgctctcaaattcggccaccgagctatccaattgggccaccga 562195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 43423865 - 43423926
Alignment:
Q  181 aaatcggccaccgatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 243  Q
    ||||||||||||||||||||  |||| |||| |||||||| ||||||  ||||||||||||||    
T  43423865 aaatcggccaccgatttttgccgaactaacaaacaaaaaa-cagagtccaaaatcggccaccg 43423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 28102490 - 28102563
Alignment:
Q  227 ttgaaaatcggccaccgattttcaacttccagaatttcaatttt-ttcaatttcgaggcactttcacaacaaaa 299  Q
    ||||||||| ||| |||||||||  ||| ||||||| ||| ||| |||||||| ||||||||||||||| ||||    
T  28102490 ttgaaaatcagcccccgattttctgctttcagaattccaaatttattcaattttgaggcactttcacaagaaaa 28102563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32219107 - 32219026
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 82  Q
    ||||||||||||||||||||| || |||||||| ||  |||| |||||| | |||||  | |||||||  ||||||||||||    
T  32219107 tagttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttata 32219026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 1e-71; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 22163194 - 22163485
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||| |||||||||||||||||||||||||||| ||  |||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22163194 tagtgttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 22163293  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||| ||||| |||||| ||||||||||||||||||   ||    
T  22163294 aaactgg---aacaaatctaggcccg-aaaatacatttctgttttatttcctgctgtcaaaattggccatcgtgcttaccaaatcggccaccgataaatg 22163389  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    | ||||||  ||   ||| |  | || | ||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||    
T  22163390 tcgaaccagaagctcaaataaaacaggtcaaaatcggccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaaca 22163485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 4 - 244
Target Start/End: Original strand, 15539725 - 15539962
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 103  Q
    ||||||||||| | ||||||| |||||||| |   ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  15539725 ttttgttgttgtcattctaaacccttgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaacaatcctcaataaaa 15539824  T
Q  104 ctggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgtgg 203  Q
    ||||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||  |||   |||| ||||||| |||||| | |    
T  15539825 ctgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaactccataaatgggccaccaatttttttcg 15539920  T
Q  204 aaccaacagac-aaaaaatcagagttgaaaatcggccaccga 244  Q
    ||||||| ||| |||||||||||||  |||||||||||||||    
T  15539921 aaccaactgacaaaaaaatcagagtgcaaaatcggccaccga 15539962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 4 - 296
Target Start/End: Original strand, 11739810 - 11740078
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 103  Q
    ||||||||||| ||||||||| |||||||  ||  |||| |||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11739810 ttttgttgttgtctttctaaacccttgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaataaaa 11739909  T
Q  104 ctggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgtgg 203  Q
    ||||   |||||||||||   || ||||||||||| ||||||||||||||||||||||||||||||                     ||||||||||  |    
T  11739910 ctgg---aacaaatctagacacg-aaaatacgtttctgttttattttctgctgtcaaaatcggcca---------------------ccgatttttgccg 11739984  T
Q  204 aaccaacagac-aaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  11739985 aaccaacagacaaaaaaaacagagttgaaaatcggccaccgattttcaactttcagaattccaatttcttcaattttgaggcactttcacaaca 11740078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 38020151 - 38019986
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||  |   |||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  38020151 tagttttgttgttgcctttctaaacccttgttccaaccccctctatctccaggtttacaccgatacaatgtctatatttatagtaaaaaaatcctcaata 38020052  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 170  Q
    |||||||   || ||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  38020051 aaactgg---aataaatctaggcccg-aaaatacgtttctgttttattttctactgtcaaaatcggccac 38019986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 3022171 - 3022006
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||||||| |||| |||||||| ||   |||||||||| |||||||| |||||||||  |||||||||||||||| |||||||||||||    
T  3022171 tagttttgttgttgcctttataaacccttgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaagagaatcctcaata 3022072  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 170  Q
    |||||    ||||||||||||| ||| ||||||||||| |||||||||| ||||| ||||||||||||||    
T  3022071 aaact---ccaacaaatctaggcccg-aaaatacgtttctgttttatttcctgctatcaaaatcggccac 3022006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 34979826 - 34979993
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||| ||||| ||||||||||  ||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||| |  |||||||||||||||    
T  34979826 tagtttttttgttacctttctaaacgcttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatggccaaagaatcctcaata 34979925  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||   |||||||||||| ||| || |||||||| |||||||||||||||||| ||||||||||||||    
T  34979926 aaactgg---aacaaatctaggcccg-aagatacgtttctgttttattttctgctgtgaaaatcggccaccg 34979993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14837281 - 14837087
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||| |||| | || |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  14837281 tagttttgttgttgtcttttttaacccttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcctcaata 14837182  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   | |||||||| |  || ||||||||||| | |||| |||||||||||||||||||| | |||    | ||||||||||| ||||||||||    
T  14837181 aaactgg---agcaaatctaagctcg-aaaatacgtttgt-tttttttttctgctgtcaaaatcggtctccgaatgctccaaatcggccgccgatttttg 14837087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 44289315 - 44289426
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||| ||||| | |||||||||| |||| ||| || |||||| |  |||||||| | |||||||||||||||||||||||||||||    
T  44289315 tagttttgttgttgccttcctaaacctttgttttagtcccctctatatcaaggtttgctatgatacaaaacctatatttatagtaaaagaatcctcaata 44289414  T
Q  101 aaactggaacaa 112  Q
    ||||||||||||    
T  44289415 aaactggaacaa 44289426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22407656 - 22407744
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||   |||||| |||||||||  |||||||||||||||||||    
T  22407656 tagttttgttgttgcctttctaaacccttgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaag 22407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17849125 - 17849032
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||  ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| | ||||||||||||||||| ||||    
T  17849125 tagttttgttgttatctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagcatcc 17849032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13910291 - 13910379
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  13910291 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13910379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19504592 - 19504680
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  19504592 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 19504680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40032305 - 40032393
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  40032305 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 40032393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42064523 - 42064435
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  42064523 tagttttgttgttgcctttctaaacccttgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 42064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42452791 - 42452703
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||| ||||||    
T  42452791 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaag 42452703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 19007645 - 19007555
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  ||||||||   |||||||||||||||||||||||    
T  19007645 ttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaagaatcc 19007555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31733012 - 31733105
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||| |||||  ||||||||||||||||||| ||||    
T  31733012 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaagcatcc 31733105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22287583 - 22287671
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||||||| | ||||||  | ||||||  |||||||||||||||||||    
T  22287583 tagttttgttgttgcctttctaaacccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaag 22287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24162459 - 24162547
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  24162459 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 24162547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19502258 - 19502345
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  ||||||||||||||||||    
T  19502258 tagttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaa 19502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28196645 - 28196552
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| | |||||| ||  |||| |||||| | |||||| |||||||||    ||||||||||||||||||||||    
T  28196645 tagttttgttgttgcctttctaaacctttgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaagaatcc 28196552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 3021907 - 3021839
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    |||||||||||||| ||||| |  ||||||||||| |||||| |||||||| |||||||||||||||||    
T  3021907 tgaaaatcggccacggatttcctgcttccagaattccaatttcttcaattttgaggcactttcacaaca 3021839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 18800565 - 18800637
Alignment:
Q  17 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||| |||||||| ||  ||||||||||||| |||||| |||||||||  |||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaag 18800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27104807 - 27104719
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||||| || |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  27104807 tagttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaag 27104719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 38019996 - 38019933
Alignment:
Q  181 aaatcggccaccgatttttgtggaaccaacagacaa-aaaatcagagttgaaaatcggccaccg 243  Q
    ||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||||    
T  38019996 aaatcggccactgatttttgctgaaccaacagacaaaaaaagcagagttgaaaatcggccaccg 38019933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 14837032 - 14836971
Alignment:
Q  235 cggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    |||||||| ||||||| |||||||||||  ||||| |||||||| |||||||||||||||||    
T  14837032 cggccaccaattttcagcttccagaattctaatttcttcaattttgaggcactttcacaaca 14836971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 34980072 - 34980136
Alignment:
Q  230 aaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaa 294  Q
    ||||||||||||||||||||| |||| ||||||  ||||| |||||||| |||||| ||||||||    
T  34980072 aaaatcggccaccgattttcagcttctagaattctaatttcttcaattttgaggcattttcacaa 34980136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43623815 - 43623903
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| | |||||| |   |||| |||||||  |||||| |||||||||  ||||| |||||||||||||    
T  43623815 tagttttgttgttgcctttctaaaccattgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaag 43623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 6264396 - 6264479
Alignment:
Q  5 tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||||||||| | |||||| ||  |||| |||||| | |||||  |||||||||  ||||||||||||||||||    
T  6264396 tttgttgttgcctttctaaacctttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaa 6264479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 37963190 - 37963285
Alignment:
Q  17 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 112  Q
    |||||||| |||||||| ||  |||| |||||| |||||||| || ||||||  ||||||||||||||||||| ||||   |||||| ||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagtatccatcataaaattggaacaa 37963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17848451 - 17848360
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||| ||||||||| ||| |||| ||  |||| |||||| ||| ||||  ||||||||   |||||||||||||||||||||||    
T  17848451 tagttttgttgttgtctttctaaaccctcgtttgagccccctctatctcaaggattac--tgatacaaagcctatatttatagtaaaagaatcc 17848360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 12342695 - 12342767
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 112  Q
    |||| |||||| |||||||| |||||||||| | ||||||||||||||||| ||||| || |||| ||||||||    
T  12342695 ccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagtatcct-aaaaaaattggaacaa 12342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 15539991 - 15540036
Alignment:
Q  252 cttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  15539991 cttccagaattccaatttcttcaattttgaggcactttcacaacaa 15540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5377676 - 5377724
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctc 49  Q
    |||||||||||||||||||||||| |||||||| ||| |||| ||||||    
T  5377676 tagttttgttgttgcctttctaaacccttgtttcagtcccctctatctc 5377724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21520940 - 21521030
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  ||  |||| |||| | |||||  |||||||||  | |||||||||||||||||    
T  21520940 tagttttgttgttgcctttctaaacccttgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaag 21521030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42923756 - 42923846
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttag--taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  | | |||| |||| ||||||||  |||| |||  |||||||||||||||||||    
T  42923756 tagttttgttgttgccattctaaacccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaag 42923846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 17897548 - 17897601
Alignment:
Q  60 ctgatacaatatctatatttatagtaaaagaat-cctcaataaaactggaacaa 112  Q
    |||||||||  ||||||||||||||||||| || |||||| |||||||||||||    
T  17897548 ctgatacaaggtctatatttatagtaaaagtatccctcaaaaaaactggaacaa 17897601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 1e-68; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 13039820 - 13039582
Alignment:
Q  2 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 101  Q
    ||||||||| ||||||||||||| |||||||| ||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13039820 agttttgttcttgcctttctaaacccttgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 13039721  T
Q  102 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 201  Q
    |||||||   ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||  |||   ||| ||||||||||||||||     
T  13039720 aactgga---acaaatctaggtccg-aaaatacgtttatgttttattttctgttgtcaaaatcggccatcgaactccataaaccggccaccgatttttgc 13039625  T
Q  202 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 244  Q
      |||||||| |||||||| ||||||  |||||||||||||||    
T  13039624 caaaccaacaaacaaaaaaccagagtgcaaaatcggccaccga 13039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 3630111 - 3630346
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |  ||||| ||  |||| |||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  3630111 tagttttgttgttgcctttctaaaccgatgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaagaatcctcaata 3630210  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  3630211 aaactgg---aacaaatctagg-cccaaaaatacgtttctgttttattttctgctgtcaaaatcgaccaccgtgctcaccaaatcggccaccga-ttttg 3630305  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccac 241  Q
      ||||||||| |||||||| ||||||  ||||||||||||    
T  3630306 ccgaaccaacaaacaaaaaaacagagtccaaaatcggccac 3630346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 25477341 - 25477103
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25477341 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcctcaata 25477242  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||   ||||||||||| ||| |||||| |||| |||||||||||||| ||||||||||||||||||  |||   |||||||||||| |||||||    
T  25477241 aaactgga---acaaatctaggcccg-aaaatatgtttctgttttattttctgatgtcaaaatcggccaccgaactccataaatcggccaccaatttttg 25477146  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 243  Q
      |||||||||||||||||| ||||||  ||||||| ||||||    
T  25477145 ccgaaccaacagacaaaaaaccagagtgtaaaatcgaccaccg 25477103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 3632185 - 3632420
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| |   |||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  3632185 tagttttgttgttgcctttctaaacccttgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaacgaatcctcaata 3632284  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||     
T  3632285 aaactgg---aacaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggtcaccgtgctcaccaaatcggccactgattttt- 3632379  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 243  Q
      ||||||||  | |||||| ||||||  ||||||||||||||    
T  3632380 ccgaaccaac--aaaaaaaaacagagtccaaaatcggccaccg 3632420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 13057261 - 13057022
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||| ||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13057261 tagttttgttcttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 13057162  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||| |||   |||||||||||| ||| ||||||||||| ||||||||||||| || ||||||| ||||| ||   ||   ||||||||||||||||||||    
T  13057161 aaattgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctactatcaaaattggccatcgaaatccataaatcggccaccgatttttg 13057066  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 244  Q
      |||||||||||||||||| ||||||  |||||||||||||||    
T  13057065 ccgaaccaacagacaaaaaaccagagtgcaaaatcggccaccga 13057022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 24338695 - 24338890
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  24338695 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcttcaata 24338794  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||    | ||||||||||||||||||||||    
T  24338795 aaactgg---aacaaatctaggcccg-aaaatacgtttatgttttattttttggtgtcaaaatcggccaccgaatgctccaaatcggccaccgatttttg 24338890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12161802 - 12161996
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||| |||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  12161802 tagttttgttgttgcatttctaaacccttgtttcagc-ccctttatctcaaggtttacaatgatacaatgtctatatttaaagtaaaagaatcctcaata 12161900  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| ||| |||||| |||| ||||||||||||||||||||||||| | |||| |||||||||||| |||||||||||||||    
T  12161901 aaactgg---aacaaatctaggcccg-aaaatatgtttctgttttattttctgctgtcaaaatcagtcaccatgctcaccaaattggccaccgatttttg 12161996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10584188 - 10584026
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||| ||| |||| | ||||||     |||| |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  10584188 tagttttgttgttgcttttataaacctttgttt-----ccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagaatcctcaata 10584094  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    ||||||||   ||||||||||| ||| |||||| |||  |||||||||||||||||||||||||||||||||    
T  10584093 aaactgga---acaaatctaggcccg-aaaatatgttactgttttattttctgctgtcaaaatcggccaccg 10584026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22490707 - 22490539
Alignment:
Q  1 tagttttgttgttgcctttctaaatcc-ttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaat 99  Q
    |||||||||||||||||||| ||| || |||||| ||  |||| |||||| ||||||||||| || |||| ||||||||||| |||||||||||||||||    
T  22490707 tagttttgttgttgcctttcaaaaacccttgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaagaatcctcaat 22490608  T
Q  100 aaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||||   ||||||||||  ||| ||||||||||| |||||||||||||||| |||||||| |||||||    
T  22490607 aaaactgga---acaaatctagacccg-aaaatacgtttctgttttattttctgctatcaaaatcagccaccg 22490539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13870669 - 13870835
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||| | |||||||||   |||||||||||  ||||||||||||||||    
T  13870669 tagttttgttgttgcctttctaaacccttatttcagc-ccctctatctcaaggtttgctctgatacaaagcctatatttatataaaaagaatcctcaata 13870767  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||   |||||||||||| ||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  13870768 aaactgg---aacaaatctaggcccg-aaaatacgtttctattttatttcctgctgtcaaaatcggccaccg 13870835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 20220135 - 20220000
Alignment:
Q  61 tgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaa 160  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||   ||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  20220135 tgatacaatgtctatatttatagtaaaggaatcatcaataaaactgga---acaaatctagacccg-aaaatatgtttttgttttattttctgctgtcaa 20220040  T
Q  161 aatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||||| |    | |||||||||||| |||||||||    
T  20220039 aatcggccacggaatgctccaaatcggccatcgatttttg 20220000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 22114119 - 22114014
Alignment:
Q  61 tgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaa 160  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||   ||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  22114119 tgatacaatgtctatatttatagtaaaggaatcatcaataaaactgga---acaaatctagacccg-aaaatatgtttttgttttattttctgctgtcaa 22114024  T
Q  161 aatcggccac 170  Q
    ||||||||||    
T  22114023 aatcggccac 22114014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 24338960 - 24339028
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  24338960 tgaaaatcggccaccgattttcatcttccagaatttcaatttcttcaattttgaggcactttcacaaca 24339028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32447563 - 32447656
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   |||||||||||||||||||||||    
T  32447563 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaagaatcc 32447656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3390446 - 3390358
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  3390446 tagttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaag 3390358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8995546 - 8995458
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||||||  |||| ||||||   |||||| ||||||||| ||||||||||||||||||||    
T  8995546 tagttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 8995458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9019993 - 9019905
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||||||  |||| ||||||   |||||| ||||||||| ||||||||||||||||||||    
T  9019993 tagttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 9019905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3233978 - 3234071
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcct 95  Q
    |||||||||||||| |||||||||||||||||| ||  |||| |||||  ||||||||||||||||||  ||||||||||||||||||| |||||    
T  3233978 tagttttgttgttgtctttctaaatccttgtttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaagcatcct 3234071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 14466400 - 14466237
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||| ||||| |||||||||  ||||||| |   | || |||||| |||||||  || ||||||  ||||||| ||||||||||||||||||||||    
T  14466400 tagttttgctgttgtctttctaaactcttgtttcaaccctctctatctcaaggtttattctaatacaaagtctatatctatagtaaaagaatcctcaata 14466301  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggcca 169  Q
    ||||||||   ||||||||||| ||| |||| |||||| |||||||||| |||||||| ||||| ||||    
T  14466300 aaactgga---acaaatctagg-ccg-aaaagacgtttctgttttatttcctgctgtcgaaatcagcca 14466237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 3630354 - 3630423
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    ||||||||||||||||||||||| |||| |||||| |||||| |||||||| ||||||||||||||||||    
T  3630354 tgaaaatcggccaccgattttcagcttctagaattccaatttcttcaattttgaggcactttcacaacaa 3630423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1072124 - 1072212
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| |||||||||| |||||||||||||||||||    
T  1072124 tagttttgttgttgcctttctaaacccttgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaag 1072212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 13039577 - 13039509
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    |||||||||||||||| |||||  |||||||||||||||||| |||||||| |||||||||||||||||    
T  13039577 tgaaaatcggccaccggttttctgcttccagaatttcaatttcttcaattttgaggcactttcacaaca 13039509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19227655 - 19227743
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | ||||||||| ||||||||||||||||||||    
T  19227655 tagttttgttgttgcctttctaaacccttgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaag 19227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 3632425 - 3632494
Alignment:
Q  227 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||| || ||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||    
T  3632425 ttgaaaatcgggcatcgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaaca 3632494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 13057017 - 13056949
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||||||| ||||||  ||||||||||| |||||| |||||||| |||||||||||||||||    
T  13057017 tgaaaatcggccaccaattttctgcttccagaattccaatttcttcaattttgaggcactttcacaaca 13056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14507422 - 14507510
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||||||  |||| |||||| | |||| | || ||||||  |||||||||||||||||||    
T  14507422 tagttttgttgttgcctttctaaacccttgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 14507510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 30729076 - 30729163
Alignment:
Q  2 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||| ||||| | | |||||||| ||  |||| |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  30729076 agttttgttgttgtctttcgatacccttgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaag 30729163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 3028148 - 3028265
Alignment:
Q  52 ggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttc 151  Q
    |||||||  ||||||||  ||||||||||||||||||| ||| | || ||||||| |||||||| ||||||  |||||| |||||||||||||||| | |    
T  3028148 ggtttactttgatacaaggtctatatttatagtaaaagtatcataaa-aaaactgaaacaacaa-tctaggctcgaaaa-tacgtttatgttttatatcc 3028244  T
Q  152 tgctgtcaaaatcggccaccg 172  Q
    |||||||||| || |||||||    
T  3028245 tgctgtcaaattcagccaccg 3028265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11983276 - 11983364
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||  | |||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  11983276 tagttttgttgttgcctttctaagcctttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11983364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 15346441 - 15346365
Alignment:
Q  18 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||| ||||| || ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  15346441 ttctaaacccttggttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcc 15346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15532928 - 15533016
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||| |||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15532928 tagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15533016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15541387 - 15541475
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||| ||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15541387 tagttttgtttttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15541475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17852609 - 17852521
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  17852609 tagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 17852521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28241568 - 28241656
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  28241568 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 28241656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 13870841 - 13870911
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaaa 298  Q
    ||||||||| ||||||||||||  |||||| |||| |||||| ||||||||  ||||||||||||||||||    
T  13870841 tgaaaatcgaccaccgattttctgcttccaaaattccaatttcttcaattttaaggcactttcacaacaaa 13870911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12195762 - 12195850
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  12195762 tagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 12195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15530369 - 15530457
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||  ||||| || ||  |||| |||||||  |||||| |||||||||  |||||||||||||||||||    
T  15530369 tagttttgttgttgccattctaagcccttgcttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaag 15530457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 22490483 - 22490415
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    ||||||||||||| ||||||||| ||| |||||||  ||||| |||||||| |||||||||||| ||||    
T  22490483 tgaaaatcggccatcgattttcagctttcagaattctaatttcttcaattttgaggcactttcataaca 22490415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 172
Target Start/End: Original strand, 25466467 - 25466583
Alignment:
Q  51 aggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttatttt 150  Q
    |||||||| |||| | || |||||||||||||||||||| |||||| | | ||||||   |||||||||  | ||| |||||||||||||||||||||||    
T  25466467 aggtttactctgacaaaagatctatatttatagtaaaagtatcctcga-agaactgg---aacaaatctgagcccg-aaaatacgtttatgttttatttt 25466561  T
Q  151 ctgctgtcaaaatcggccaccg 172  Q
    |||||   ||||||||| ||||    
T  25466562 ctgctagtaaaatcggcaaccg 25466583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 10583950 - 10583884
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaa 294  Q
    ||||||| | |||||| |||||| ||||||||||| |||||| ||||||||  ||||||||||||||    
T  10583950 tgaaaatggaccaccggttttcagcttccagaattccaatttcttcaattttaaggcactttcacaa 10583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14459012 - 14459093
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 82  Q
    |||||||||||||||||||||||| |||| ||| ||  |||| |||||| | |||| | |||||||||  ||||||||||||    
T  14459012 tagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 30034853 - 30034942
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctc----caggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||||| |||||||||||  |||| ||||||     | |||||  |||||||||  |||||||||||||||||||    
T  30034853 ttttgttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaag 30034942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 20219980 - 20219938
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaatttt 270  Q
    ||||||||||||||||||||||| |||||| |||| |||||||    
T  20219980 tgaaaatcggccaccgattttcagcttccataattccaatttt 20219938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 6e-64; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 25251524 - 25251814
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||| ||||||||| | |||||| ||  |||| |||||| |||||||| |||||||||  |||||||||||||||||| |||| ||||||    
T  25251524 tagttttgttgttgtctttctaaacctttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaaaaatcttcaata 25251623  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| ||| ||||||||||| | |||||| ||||||||| |||||||||||||     | |||||| |||||||||||||||    
T  25251624 aaactgg---aacaaatctaggcccg-aaaatacgtttcttttttatattctgctgttaaaatcggccaccaaatgctccaaattggccaccgatttttg 25251719  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaac 295  Q
      |||||||||||||||||| |||   | ||||||||||||||||||||  ||||||||||| |||||| |||||||| ||||||||||||||||    
T  25251720 ccgaaccaacagacaaaaaaacagcactcaaaatcggccaccgattttctgcttccagaattccaatttcttcaattttgaggcactttcacaac 25251814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 18839619 - 18839382
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||||| |||||| |||||||| ||  |||| ||||||  |||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  18839619 tagttttgttgttgcctatctaaacccttgtttcagccccctctatctcatggtttacaataatacaatgtctatatttatagtaaaagaatcctcaata 18839520  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||   | |||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  18839519 aaact---ataacaaatctaggcccg-aaaatacgtttctgtttaattttctgctgtcaaaatcggccaccgaatgctccaaatcggccaccgatttttg 18839424  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 243  Q
      |||||||||| ||||||| ||||||  ||||||||||||||    
T  18839423 ccgaaccaacaggcaaaaaa-cagagtccaaaatcggccaccg 18839382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 25248763 - 25249055
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||| ||| |||| |||||||||||    
T  25248763 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaaaaatcctcaata 25248862  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||| |   |||||||||||| ||| ||| || |||| |||||||||| ||||||  ||||||||| ||||    | |||||||||||||| |||||||    
T  25248863 aaacttg---aacaaatctaggcccg-aaagtatgtttctgttttatttcctgctgcaaaaatcggctaccgaatgctccaaatcggccaccaatttttg 25248958  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
      |||||||| ||||||||| |||   | ||||||||||||||||||||  ||||||||||| |||||| |||||||| |||||||| |||||||||    
T  25248959 ccgaaccaactgacaaaaaaacagtactcaaaatcggccaccgattttctgcttccagaattccaatttcttcaattttgaggcactatcacaacaa 25249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 50248821 - 50249016
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||| |||| |||| | |||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50248821 tagttttgttgttgtctttttaaacctttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 50248920  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||||   |||||||||||| |||  ||||| |||| ||||||| |||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  50248921 aaactgg---aacaaatctaggcccg-taaatatgtttctgttttaatttctgctgtcaaaatcggccaccgaatgctccaaatcggccaccgatttttg 50249016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 31489947 - 31489784
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||| |||||||||| |||||||| |   |||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  31489947 tagttttgttgttacctttctaaacccttgtttcaaccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaata 31489848  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggcc 168  Q
    |||||   | |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  31489847 aaact---agaacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggcc 31489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 17324096 - 17323858
Alignment:
Q  2 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 101  Q
    ||||||||||| |||||||| || |||||||||||  | || |||||| |||||||| || ||||||  |||||||||||| ||||||||||||||||||    
T  17324096 agttttgttgtggcctttctgaacccttgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaagaatcctcaataa 17323997  T
Q  102 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 201  Q
    |||||||||||   || ||||  |||||  ||||||| ||||||| |||||||||||||||| ||||||||  |||   ||| ||| ||||||||||||     
T  17323996 aactggaacaa---atttaggcacgaaag-tacgtttctgttttaatttctgctgtcaaaattggccaccgaactccataaaccggtcaccgatttttgc 17323901  T
Q  202 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 244  Q
     |||||||||||||||||| |||||   |||||||||||||||    
T  17323900 cgaaccaacagacaaaaaaccagagcataaaatcggccaccga 17323858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17186377 - 17186542
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||| | ||||||||| ||||||||||||| |||||||||||||||||    
T  17186377 tagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaagaatcctcaata 17186476  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 170  Q
    |||||||   ||||||| ||||||| |||||||||||| | |||||||| ||||||||||||||||||||    
T  17186477 aaactgg---aacaaatttaggtcc-aaaaatacgtttcttttttatttcctgctgtcaaaatcggccac 17186542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18307141 - 18307054
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| ||||    
T  18307141 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31423123 - 31423234
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||||||||||||   ||||||||||||||||| |||  | |||    
T  31423123 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagtatctcccata 31423222  T
Q  101 aaactggaacaa 112  Q
    ||| ||||||||    
T  31423223 aaattggaacaa 31423234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11457724 - 11457817
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||| ||||||||| | |||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  11457724 tagttttgttgttgtctttctaaaccattgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 11457817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 50076921 - 50077014
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||| |||||||||||||||||| ||  |  | |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  50076921 tagttttgttgttgtctttctaaatccttgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 50077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17318925 - 17318832
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  |||||||| | ||||||||||||||||| |||||    
T  17318925 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaaaaatcc 17318832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 50079070 - 50079163
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||| || ||||||||| |||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  50079070 tagttttgttgctgtctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatcc 50079163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6756559 - 6756471
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||  |||||||| ||| |||| ||| || |||||||||| |||||||| ||||||||||||| |||||    
T  6756559 tagttttgttgttgcctttctaagcccttgtttcagtcccctctatttcaaggtttacaccgatacaatgtctatatttatagcaaaag 6756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 17323853 - 17323785
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    |||||||||| ||||||||||| |||||||||||| |||||| |||||||| |||||||||||||||||    
T  17323853 tgaaaatcggtcaccgattttctacttccagaattccaatttcttcaattttgaggcactttcacaaca 17323785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51750071 - 51749983
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51750071 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51749983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13215113 - 13215025
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |  ||||| |||||||||  |||||||||||||||||||    
T  13215113 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 13215025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15823578 - 15823490
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  15823578 tagttttgttgttgcctttctaaacccttgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaag 15823490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41646952 - 41646864
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||| ||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  41646952 tagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 41646864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 17324886 - 17324973
Alignment:
Q  2 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||| ||||||| |||||||||||  |||| ||||| ||||||||| ||| | |||  |||||||||||||||||||    
T  17324886 agttttgttgttgccattctaaacccttgttttagccccctgtatcttcaggtttactctggttcaaggtctatatttatagtaaaag 17324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 50249065 - 50249136
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaaaa 299  Q
    |||||||| ||  |||||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  50249065 tgaaaatcagcggccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaaaa 50249136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13761869 - 13761781
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||| |||||||||||||||||| |||||||| ||  | || |||||||| |||| | |||||||||  |||||||||||||||||||    
T  13761869 tagttatgttgttgcctttctaaacccttgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16226199 - 16226111
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||| |||||||| |||||||||||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  16226199 tagttttgttgttgcttttctaaacccttgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16226111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20302491 - 20302403
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||| ||||||    
T  20302491 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaag 20302403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28207315 - 28207403
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  28207315 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 28207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38925727 - 38925815
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||||| ||  ||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  38925727 tagttttgttgttgcctttctgaactcttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 38925815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47451680 - 47451592
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||| ||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  47451680 tagttttgttgttgccattccaaacccttgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 47451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31425268 - 31425335
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaa 68  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||    
T  31425268 tagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacattgatacaa 31425335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 17186620 - 17186690
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaaa 298  Q
    |||||||| |||||||||||||  |||||||| ||||||||| |||||||| ||| | |||||||||||||    
T  17186620 tgaaaatcagccaccgattttctgcttccagattttcaatttcttcaattttgagtcgctttcacaacaaa 17186690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16428685 - 16428592
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||   ||||| | |||||| || | |||||||||||||||||| ||||    
T  16428685 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagtatcc 16428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 50307796 - 50307889
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||| ||||||||||||| |||| ||| ||  || |||||||| ||||||||  ||||||||    ||||||||||||||||||||||    
T  50307796 tagttttgttattgcctttctaaacccttttttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaagaatcc 50307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 51752394 - 51752309
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||| ||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51752394 ttttgttgttacctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51752309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2949480 - 2949568
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||| | | ||| |||||||||||||||| |||||||    
T  2949480 tagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaag 2949568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6823047 - 6822959
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||  ||||||||||    
T  6823047 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 9241335 - 9241446
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccc-tatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaat 99  Q
    |||||||||||||||||||||||| |||||||| ||  ||| | |||||  |||||||| |||||||||   |||||||||||||||||| | || | ||    
T  9241335 tagttttgttgttgcctttctaaa-ccttgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagtaacccccat 9241433  T
Q  100 aaaactggaacaa 112  Q
    |||| ||||||||    
T  9241434 aaaattggaacaa 9241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31735770 - 31735862
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatc----tccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||||||  |||| ||||    || | |||||  |||||||||  |||||||||||||||||||    
T  31735770 tagttttgttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaag 31735862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 14183852 - 14183945
Alignment:
Q  18 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 112  Q
    ||||||| |||||||| ||  | || |||||| |||||||| ||||||||   ||||||||||||||||||||||||| || |||||| ||||||    
T  14183852 ttctaaacccttgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaagaatcct-aaaaaaactagaacaa 14183945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 30790681 - 30790731
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||| |||||| |||||||| |||||||||| |||||||||||||||||||    
T  30790681 ccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaag 30790731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 43104141 - 43104030
Alignment:
Q  51 aggtttacactgatacaatatctatatttatagtaaaagaatcc-tcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattt 149  Q
    |||||||| |||||||||  ||||||||||||||||||| |||| |||| |||||||||||||   ||||| | || ||||||| |||| ||||||||||    
T  43104141 aggtttactctgatacaaggtctatatttatagtaaaagtatccctcaa-aaaactggaacaa---atctaagccc-aaaaatatgtttctgttttattt 43104047  T
Q  150 tctgctgtcaaaatcgg 166  Q
    | || || |||||||||    
T  43104046 tatgttggcaaaatcgg 43104030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2617548 - 2617459
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaaga 90  Q
    |||||||||||||| ||||||||| |||||||| ||   ||| |||||| | |||| | |||||||||  |||||||||||||| |||||    
T  2617548 tagttttgttgttgtctttctaaacccttgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaaga 2617459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 18800861 - 18800914
Alignment:
Q  44 tatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctca 97  Q
    |||||| |||||||| |||||||||  ||||||||||||||||||| |||||||    
T  18800861 tatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatcctca 18800914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 49495468 - 49495541
Alignment:
Q  21 taaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  49495468 taaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatcc 49495541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6995949 - 6996037
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| | ||||||  |  |||| |||||| || ||||| ||||| |||  |||||||||||| ||||||    
T  6995949 tagttttgttgttgcctttctaaaccgttgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaag 6996037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10400077 - 10400165
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||||  |||| | |||||||||  ||||||||||||| |||||    
T  10400077 tagttttgttgttgtcattctaaacccttgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaag 10400165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20291489 - 20291401
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| |   |||| |||||| |  ||| | || ||||||  |||||||||||||||||||    
T  20291489 tagttttgttgttgcctttctaaacccttgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaag 20291401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28998502 - 28998590
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||   ||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  28998502 tagttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 28998590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29004218 - 29004306
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||   ||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  29004218 tagttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 29004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28842527 - 28842437
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  ||  |||| |||| | |||| | |||||||||  | |||||||||||||||||    
T  28842527 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaag 28842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 31489793 - 31489726
Alignment:
Q  230 aaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    |||||||||| || ||||||  ||||||||||| |||||| ||||||||  |||||||||| ||||||    
T  31489793 aaaatcggcccccaattttctgcttccagaattccaatttcttcaattttaaggcactttcgcaacaa 31489726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 40133929 - 40133874
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||| || ||||| |||||||||   |||||||||||||||||||||||    
T  40133929 ccctatatctcaagatttactctgatacaaagcctatatttatagtaaaagaatcc 40133874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 42922216 - 42922173
Alignment:
Q  51 aggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  42922216 aggtttactctgatacaaaatctatatttatagtaaaagtatcc 42922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6823917 - 6823828
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||   |||| |||||| | |||| | |||||||||  |||||||  ||||||||||    
T  6823917 tagttttgttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 16431095 - 16431022
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 112  Q
    |||| |||||| |||||| | ||||||||| | |||||||||||||||||| ||||   |||||| ||||||||    
T  16431095 ccctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagtatccctcataaaattggaacaa 16431022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 5e-58; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 695921 - 695631
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| |   |||| |||||| ||||||||||| ||||||| |||||||| ||||||||||||| |||||||    
T  695921 tagttttgttgttgcctttctaaacccttgtttcatccccctttatctcaaggtttacactcatacaatgtctatattcatagtaaaagaattctcaata 695822  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||   |||||||||||  |   ||||||||||||||| ||||||||| || |||||||||||| ||||||||||||||| |||||||||   ||    
T  695821 aaactgga---acaaatctagg--cttgaaatacgtttatgttatattttctgttggcaaaatcggccatcgtgctcaccaaatcagccaccgataaatg 695727  T
Q  201 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    | |||||   ||   ||| |  | || | ||||||||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  695726 ttgaacctgaagctcaaataaaacaggtcaaaatcggccaccaattttcagcttccagaatttcaatttcttcaattttgaggcactttcacaaca 695631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 10474574 - 10474764
Alignment:
Q  5 tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaac 104  Q
    ||||||||||||||||||||||||||||| ||  |||| ||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  10474574 tttgttgttgcctttctaaatccttgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaagagaatcctcaataaaac 10474673  T
Q  105 tggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgattttt 199  Q
    |||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    | |||||||||||||||||||||    
T  10474674 tgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctccaaatcggccaccgattttt 10474764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 39398240 - 39398431
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||| | |||||| | ||||||||||||||||||||||||||||    
T  39398240 tagttttgttgttgcctttctaaacccttgtttcagc-ccctctatctcaaggtttacaccggtacaatgtttatatttatagtaaaagaatcctcaata 39398338  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttt 198  Q
    |||||||   |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  39398339 aaactgg---aacaaatctaggcccg-aaaatacgtttatgttttattttctgctgtc-aaatcggccaccgtgctcaccgaatcggccaccaatttt 39398431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 17072915 - 17072721
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17072915 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 17072816  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgattttt 199  Q
    ||| |||   |||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||    | |||||||||||||||||||||    
T  17072815 aaaatgg---aacaaatctagg-cctgaaaatacgtttatgttttattttctactgtcaaaatcggccaccgaatgctccaaatcggccaccgattttt 17072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 24126888 - 24126693
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||| |||||||||  ||||||| ||  || | |||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  24126888 tagttttgttgttgtctttctaaactcttgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaagaatcctcaata 24126789  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||   ||||||||||   || ||||||| |||||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  24126788 aaactgga---acaaatctagactcg-aaaatacatttatgttttattttctgctgtcaaaatcggccaccgaatactccaaatcggccaccgatttttg 24126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 2723961 - 2723804
Alignment:
Q  39 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgttt 138  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||   |||||||||||| ||| |||||||||||    
T  2723961 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaacttgg---aacaaatctaggcccg-aaaatacgttt 2723866  T
Q  139 atgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
     |||||||||| |||||||||||||||||||||     | |||||| |||||||||||||||    
T  2723865 ctgttttatttcctgctgtcaaaatcggccaccaaatgctccaaattggccaccgatttttg 2723804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 20043082 - 20042915
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||| |  ||||||||   |||||||||||||||||||||||||||||    
T  20043082 tagttttgttgttgcctttctaaacacttgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaagaatcctcaata 20042983  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||   || ||||||||| ||| ||||||||||| |||||||||| ||| | ||||||||||||||||    
T  20042982 aaactgg---aataaatctaggcccg-aaaatacgtttctgttttatttcctgatctcaaaatcggccaccg 20042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 20045042 - 20044875
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||| || ||||| |||||||| ||  |||| | |||| |||||| | |||||||||   |||||||||||||||||||||||||||||    
T  20045042 tagttttgttgttgctttcctaaacccttgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaagaatcctcaata 20044943  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    ||||||||   ||||||||||  ||| ||||||| ||| |||||||||  || |||||||||||||||||||    
T  20044942 aaactgga---acaaatctagacccg-aaaatacatttctgttttattccctactgtcaaaatcggccaccg 20044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 34530913 - 34531079
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||| ||||||||  ||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||| |||||||||||||| || |    
T  34530913 tagttttgttgttgcatttctaaacacttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaagaatcct-aaaa 34531011  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||   |||||||||||| ||  ||||||||||||||||||||||||| || || || ||||||||||    
T  34531012 aaactgg---aacaaatctagg-cctgaaaatacgtttatgttttattttctactatcgaattcggccaccg 34531079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25904135 - 25904041
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcct 95  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  25904135 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcct 25904041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31472860 - 31472953
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||||||||||||||||||| |||||||||||  |||| |||||| ||||||||||| ||||||| || |||||||||||||||| ||||    
T  31472860 tagttttgttgttgcctttctaaacccttgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaagcatcc 31472953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 20507712 - 20507797
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||| |||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  20507712 tttttttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaag 20507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2818583 - 2818671
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||| |||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  2818583 tagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4236661 - 4236573
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  4236661 tagttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaag 4236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31179618 - 31179706
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||| |||||||||||||||||||    
T  31179618 tagttttgttgttgcctttctaaacccttgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 31179706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40221554 - 40221466
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||| |||||||| ||||  |||| |||||||||||||||||||    
T  40221554 tagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaag 40221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17818737 - 17818817
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 82  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| | |||| ||||||||||||||||||| ||||||||||||    
T  17818737 tagttttgttgttgcctttctaaactcttgtttcagc-ccctctttctcaaggtttacactgatacaatgtctatatttata 17818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38882138 - 38882049
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||   |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  38882138 tagttttgttgttgcctttctaaacccttgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 38882049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2174951 - 2174863
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   || |||||||||||||||    
T  2174951 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaag 2174863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25921720 - 25921808
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  25921720 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25921808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31542767 - 31542679
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31542767 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31542679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31545112 - 31545024
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31545112 tagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31545024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 37706031 - 37706115
Alignment:
Q  5 tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||| |||||||||||||| | || ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  37706031 tttgtcgttgcctttctaaacctttatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 37706115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 2723751 - 2723698
Alignment:
Q  240 accgattttcaacttccagaatttcaattttttcaatttcgaggcactttcaca 293  Q
    ||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||    
T  2723751 accgattttcagcttccagaattccaatttcttcaattttgaggcactttcaca 2723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 20044817 - 20044756
Alignment:
Q  236 ggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    ||||||||||||||  ||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  20044817 ggccaccgattttctgcttccagaattccaatttcttcaattttgagtcactttcacaacaa 20044756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6756526 - 6756438
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| | |||||| ||  |||| |||||| | |||||   |||||||| ||||||||| ||||||||||    
T  6756526 tagttttgttgttgcctttctaaaccattgtttcagctccctctatctcaaagtttaatatgatacaagatctatattaatagtaaaag 6756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12556170 - 12556258
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||| ||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  12556170 tagttttgttgttgtcattctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 12556258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21948058 - 21947971
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| |  ||||| |||||||||  |||||||||||||||||||    
T  21948058 tagttttgttgttgtctttctaaacccttgtttcag-cccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 21947971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 26098506 - 26098586
Alignment:
Q  9 ttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||| ||||||| |||| ||| ||  |||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  26098506 ttgttgccattctaaacccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 26098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39854515 - 39854428
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  39854515 tagttttgttgttgcctttctaaacccttgtttcag-cccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 39854428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41585953 - 41586041
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||| |||   ||||||| |||||||| ||  |||| |||||| |||||||| ||||||||| | ||||||||||||||||||    
T  41585953 tagttttgttcttgttattctaaacccttgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaag 41586041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 36208597 - 36208519
Alignment:
Q  17 tttctaaatccttgtttt-agtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||| ||||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  36208597 tttctaaacccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagcatcc 36208519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 24126640 - 24126579
Alignment:
Q  235 cggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaaca 296  Q
    |||||||| ||||||| |||| |||||| |||||| |||||||| ||| |||||||||||||    
T  24126640 cggccaccaattttcagcttctagaattccaatttcttcaattttgagacactttcacaaca 24126579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10529346 - 10529434
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| |   | || |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  10529346 tagttttgttgttgcctttctaaacccttgtttcaacccactctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 10529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26097765 - 26097677
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| | || ||| ||  |||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  26097765 tagttttgttgttgccattctaaacctttatttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaag 26097677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27912568 - 27912520
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctc 49  Q
    |||||||||||||||||||||||| |||||||| || ||||| ||||||    
T  27912568 tagttttgttgttgcctttctaaacccttgtttcagcaccctctatctc 27912520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 42770562 - 42770523
Alignment:
Q  231 aaatcggccaccgattttcaacttccagaatttcaatttt 270  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  42770562 aaatcggccaccgattttctgcttccagaatttcaatttt 42770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16776190 - 16776101
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctata-tttatagtaaaag 89  Q
    ||||||||||||||||||| |||| |||||||| ||  |||| |||||| | |||| | | |||||||  |||||| |||||||||||||    
T  16776190 tagttttgttgttgcctttgtaaacccttgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaag 16776101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 3e-53; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 38270233 - 38270543
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||   | | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38270233 tagttttgttgttgcctttctaaacccttgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaata 38270332  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    | | |||||||||| |||||||||    
T  38270333 aaactggaacaa---atctaggcccgaaaa-tacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctctaaatcggccatcgatttttg 38270428  T
Q  201 tggaaccaacagacaaaaaatcagag-------------------ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcga 281  Q
      |||||||  | ||||||| |||                     |||||||||||||||||||||||  || ||||||||||||||| |||||||| ||    
T  38270429 ccgaaccaaaggccaaaaaaacagtccaaaatcggctatcgtgctttgaaaatcggccaccgattttctgctaccagaatttcaatttcttcaattttga 38270528  T
Q  282 ggcactttcacaaca 296  Q
    |||||||||||||||    
T  38270529 ggcactttcacaaca 38270543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 2891403 - 2891235
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgat-acaatatctatatttatagtaaaagaatcctcaat 99  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  2891403 tagttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaagaatcctcaat 2891304  T
Q  100 aaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||||   ||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  2891303 aaaactgga---acaaatcta-gtcccataaatacgtttctgttttattttctgctgtcaaaatcggccaccg 2891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 3937456 - 3937659
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||| |||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||| ||  ||||||||||||||||||||||||| ||||    
T  3937456 tagtttttttgttgcctttctaaacccttgtttcagctccctctatctcaaggtttactctgataaaag-tctatatttatagtaaaagaatcctaaata 3937554  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    ||||||||| ||   ||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    || |||||||||||||||||    
T  3937555 aaactggaaaaa---atctaggcccgaaaa-tacgtttctgttttatttcctgctgtcaaaatcggccaccgtgctgtagaattcggccaccgatttttg 3937650  T
Q  201 tggaaccaa 209  Q
      |||||||    
T  3937651 ctgaaccaa 3937659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 6132958 - 6132764
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||||||||||||||||| || |||||||  ||   ||| |||||| | |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  6132958 tagttttgttgttgcctttctgaacccttgttc-agcctcctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaagaatcctcaata 6132860  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 200  Q
    |||||   | |||||||||||| |   ||||||||||||||||||||||| ||||||||||||||||||||     | ||||||||||||||||||||||    
T  6132859 aaact---agaacaaatctagg-catgaaaatacgtttatgttttattttatgctgtcaaaatcggccaccaaatgctccaaatcggccaccgatttttg 6132764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 18409594 - 18409759
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  | || ||||||   ||||||||||||||||  ||||||||||||||||||||||||| || |    
T  18409594 tagttttgttgttgcctttctaaacccttgtttcagc-ctctctatctcattgtttacactgatacaaattctatatttatagtaaaagaatcct-aaaa 18409691  T
Q  101 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||   |||||||||||| ||| |||||| || | ||||||||||||| |||||||| | ||||||||    
T  18409692 aaactgg---aacaaatctaggcccg-aaaatatgtgtctgttttattttctactgtcaaatttggccaccg 18409759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 47564588 - 47564497
Alignment:
Q  206 ccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||  |||||||||||  ||||| |||||||| ||||||||||||||||||    
T  47564588 ccaacagacaaaaaaccagagtgcaaaatcggccaccgattttctgcttccagaattctaatttcttcaattttgaggcactttcacaacaa 47564497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 24446833 - 24446919
Alignment:
Q  8 gttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  24446833 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 24446919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12396092 - 12396185
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||||||||||||||||||||||| ||  || | |||||| ||||||||| | ||||||| ||||||||||||||||||| ||||    
T  12396092 tagttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcatcc 12396185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12401054 - 12401147
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||||||||||||||||||||||| ||  || | |||||| ||||||||| | ||||||| ||||||||||||||||||| ||||    
T  12401054 tagttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcatcc 12401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 19095965 - 19095875
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||| | ||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  19095965 ttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 19095875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 6132715 - 6132646
Alignment:
Q  228 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    |||||||| |||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  6132715 tgaaaatcagccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaa 6132646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11435041 - 11434953
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  11435041 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11434953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51015332 - 51015244
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51015332 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaag 51015244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38928425 - 38928518
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||||| || ||||||   |||||||||||||||||||||||    
T  38928425 tagttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaagaatcc 38928518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5198506 - 5198418
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  5198506 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 5198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22044637 - 22044725
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  22044637 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 22044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22802981 - 22803069
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22802981 tagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22803069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24888882 - 24888794
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  24888882 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaag 24888794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36378378 - 36378290
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||||| |||||||  |||||||||  |||||||||||||||||||    
T  36378378 tagttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaag 36378290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 37313316 - 37313400
Alignment:
Q  4 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  |||||||| | |||||||||||||||||    
T  37313316 ttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40637160 - 40637072
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||| ||||    
T  40637160 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 40637072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47274813 - 47274725
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  47274813 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 47274725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48486405 - 48486317
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  48486405 tagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 48486317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36919832 - 36919922
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatc--tccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||  || | |||||| |||||||||  |||||||||||||||||||    
T  36919832 tagttttgttgttgcctttctaaacccttgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaag 36919922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33415734 - 33415827
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||| |||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   |||||||| |||||||| |||||    
T  33415734 tagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaaaaatcc 33415827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 41997578 - 41997485
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||||||||| ||||||| ||  ||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||| ||||||||    
T  41997578 tagttttgttgtttcctttctgaacacttgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagtagaagaatcc 41997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 619694 - 619782
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| |||| |||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  619694 tagttttgttgttgtctttataaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 619782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5101083 - 5100995
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| | |||||| ||| |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  5101083 tagttttgttgttgtcattctaaacctttgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaag 5100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9174393 - 9174481
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||| |||||||| |||||||| ||  |||| |||||||| |||| |  ||||||||  |||||||||||||||||||    
T  9174393 tagttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaag 9174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22046932 - 22047020
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | | |||||||   ||||||||||||||||||    
T  22046932 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaag 22047020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22801109 - 22801197
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22801109 tagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22801197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24879075 - 24878987
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| ||||||||| ||| |||| ||  |||| |||||||| |||||| | |||||||  |||||||||||||||||||    
T  24879075 tagttttgttgttgtctttctaaaccctagtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaag 24878987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24880537 - 24880449
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| ||| ||||  |  |||| |||||||| |||||| | |||||||  |||||||||||||||||||    
T  24880537 tagttttgttgttgcctttctaaaccctagtttacgccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaag 24880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31849846 - 31849934
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||  |||| | ||||||||| | |||||||| |||||||||    
T  31849846 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaag 31849934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40091662 - 40091750
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| ||||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  40091662 tagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 40091750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7941407 - 7941317
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  ||  |||| ||||| ||||| | |||||||||  |||||||||||||||||||    
T  7941407 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaag 7941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9176721 - 9176807
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaa 87  Q
    ||||||||||||||| |||||||| |||||||| ||  |||| |||||||| |||| |  ||||||||  |||||||||||||||||    
T  9176721 tagttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaa 9176807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 31983837 - 31983937
Alignment:
Q  60 ctgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtca 159  Q
    |||||||||| |||||| ||||| |||||| |||||  | |||||||||||||   ||||| | || ||||||| |||||||||||||||||||||| ||    
T  31983837 ctgatacaatgtctataattataataaaagtatccttcaaaaaactggaacaa---atctaagccc-aaaaatatgtttatgttttattttctgctggca 31983932  T
Q  160 aaatc 164  Q
    |||||    
T  31983933 aaatc 31983937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6764925 - 6764837
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  6764925 tagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 6764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47868487 - 47868399
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||| ||| ||  | || |||||||| |||| | |||||||||  |||||||||||||| ||||    
T  47868487 tagttttgttgttgcctttctaaacccttctttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 47868399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 56030530 - 56030443
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 88  Q
    |||||||||||||| | ||||||| |||||||| ||  || | |||||| |||||||| |||||||||   |||||||||||||||||    
T  56030530 tagttttgttgttgtcattctaaacccttgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 27499014 - 27498964
Alignment:
Q  247 ttcaacttccagaatttcaattttttcaatttcgaggcactttcacaacaa 297  Q
    |||| ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  27499014 ttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaa 27498964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2485119 - 2485208
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccc-tatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||||||  ||| | || ||| | |||| | |||||||||  |||||||||||||| ||||    
T  2485119 tagttttgttgttgcctttctaaacccttgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2485208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 18537733 - 18537806
Alignment:
Q  17 tttctaaatccttgtttt-agtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||| ||||||||| ||  |||| |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  18537733 tttctaaacccttgttttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37089618 - 37089709
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctc---caggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||| ||||||| |||||||| ||  |||| ||||||   || |||||  |||||||||  |||||||||||||||||||    
T  37089618 tagttttgttgttgccattctaaacccttgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaag 37089709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14633405 - 14633318
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| | |||||| ||  || | |||||| | |||||| |||||||||  |||||||||||||| ||||    
T  14633405 tagttttgttgttgcctttctaaacctttgtttcag-cccttctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 14633318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16453395 - 16453307
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||||||| |||| |||||||| ||  |||| ||||||  ||||| | |||||||||   |||||||||||| |||||    
T  16453395 tagttttgttgttgcctttttaaacccttgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaag 16453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16934390 - 16934478
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||| |||||||| |||||| | ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  16934390 tagttttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16934478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 27499108 - 27499076
Alignment:
Q  140 tgttttattttctgctgtcaaaatcggccaccg 172  Q
    |||||||||||||||||||||||||||||||||    
T  27499108 tgttttattttctgctgtcaaaatcggccaccg 27499076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44600085 - 44600173
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  | ||||||  |||||||||||||||||||    
T  44600085 tagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaag 44600173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 15032784 - 15032894
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    ||||||| |||||| ||| ||||| |||||||| ||  |||| |||||| |||||||| ||| ||| |  ||||||||||||||||||| ||||   |||    
T  15032784 tagttttcttgttgactt-ctaaacccttgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagtatccctcata 15032882  T
Q  101 aaactggaacaa 112  Q
    ||| ||||||||    
T  15032883 aaattggaacaa 15032894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47210987 - 47211081
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctcc------aggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||||      | |||||  |||||||||  |||||||||||||||||||    
T  47210987 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaag 47211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19322782 - 19322701
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 83  Q
    ||||||| |||||| ||| ||||| |||||||| |   |||| |||||| |||||||| ||||||||| ||||||||||||||    
T  19322782 tagttttcttgttgactt-ctaaacccttgtttcatccccctctatctcaaggtttactctgatacaagatctatatttatag 19322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 8756540 - 8756585
Alignment:
Q  44 tatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||| |||||||| |||||||||  |||||||||||||||||||    
T  8756540 tatctcaaggtttactctgatacaaggtctatatttatagtaaaag 8756585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35680 - 35580
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 100  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||| || |||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  35680 tagttttgttgttgcctttctaaacccttgtttcagcgcc-tctatcacccggtttgtactgatacaatgtctatatttatagtaaaagaatcctcaata 35582  T
Q  101 aa 102  Q
    ||    
T  35581 aa 35580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 79900 - 79807
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    ||||||| |||||| ||||||||| |||||||| ||  |||| |||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  79900 tagttttattgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaagaatcc 79807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 79226 - 79140
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaa 87  Q
    |||||||||||||||||||||||| |||||||||||  |||| |||||| || ||||| ||||| |||  |||||||||||||||||    
T  79226 tagttttgttgttgcctttctaaacccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaa 79140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4038 - 3950
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  4038 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 3950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2921 - 2833
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  2921 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaag 2833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11720 - 11808
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||| | |||||||||| ||||| ||  |||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  11720 tagttttgttgttgtcattctaaatccctgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 11808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15060 - 14972
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||||| |||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  15060 tagttttgttgttgcctttctaaatcattgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41730 - 41818
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  41730 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 41818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1078 - 1166
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| |||||||| ||  || | |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  1078 tagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6240 - 6152
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    ||||||| ||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  6240 tagttttattgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 183887 - 183974
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 89  Q
    |||||||||||||||||||||||| | |||||| ||  || | |||||| | |||||| |||||||||  |||||||||||||| ||||    
T  183887 tagttttgttgttgcctttctaaacctttgtttcag-cccttctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2083 - 2036
Alignment:
Q  1 tagttttgttgttgcctttctaaatccttgttttagtaccctatatct 48  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||||||    
T  2083 tagttttgttgttgcctttctaaacccttgtttcagccccctatatct 2036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 16115 - 16158
Alignment:
Q  51 aggtttacactgatacaatatctatatttatagtaaaagaatcc 94  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  16115 aggtttactctgatacaaaatctatatttatagtaaaagtatcc 16158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University