View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14433_low_25 (Length: 213)
Name: NF14433_low_25
Description: NF14433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14433_low_25 |
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| [»] scaffold0027 (1 HSPs) |
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Alignment Details
Target: scaffold0027 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 32344 - 32252
Alignment:
| Q |
10 |
agcagcacagacaccattagagctaccttggcttgaacccttacggcatttggagtcaaaggcacatagggttgattgtggtgaaccaccctg |
102 |
Q |
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| T |
32344 |
agcatcacaaacaccattagagctaccttggcttgaacccttacgacatttggagtcaaaagcacatagggttgattgtggtgaacctccctg |
32252 |
T |
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