View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14434_high_4 (Length: 415)
Name: NF14434_high_4
Description: NF14434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14434_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 20 - 386
Target Start/End: Original strand, 36152097 - 36152440
Alignment:
| Q |
20 |
aagatcaatacaaaataaataatggaattaagtataatgatgtttacgtaaacctatataatttgtacatattatgcactactaattgatcaattaat-a |
118 |
Q |
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| T |
36152097 |
aagatcaatacaaaataaataatggaattaagtataatgatgtttacgtaaacctatataatttgtacatattatgcactactaattgatcaattaatta |
36152196 |
T |
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| Q |
119 |
atatagatataggttctagcaagtcactatattttttaatggtttatataatcaaatttgtacatcacgtacatagttggtttaggtgtctttttcctac |
218 |
Q |
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| T |
36152197 |
atatacatatat-------------------ttttttaatggtttacataatcaa-tttgtacatcacgtacatagttggtttaggtgtctttttcctac |
36152276 |
T |
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| Q |
219 |
ggacactgccagatatatgcattgccaagtaccacaaggaagtaggtc-taggtcctaaatgttagtatattgtggacttaattacctgaaccacatgtg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| |
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| T |
36152277 |
ggacactgccagatatatgcattgccaagtaccacaaggaagtaggtccta-----ttaatgttagtatattgtggacttaattacctgaaccacatgtg |
36152371 |
T |
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| Q |
318 |
aaggaacttccatactctcaaatttatttagtggtatagctttgggtctatatttccttttccacgttg |
386 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36152372 |
aaggaacttccatactctcaaatttatttagtggtatagctttgggtctatatttccttttccacgttg |
36152440 |
T |
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