View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14434_low_9 (Length: 373)
Name: NF14434_low_9
Description: NF14434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14434_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 9 - 356
Target Start/End: Complemental strand, 45460918 - 45460571
Alignment:
| Q |
9 |
cgaagaatatgcaacctcaacgaggccaaaacataacagaaagcatgcggatatcatcaaattcttctcccaatacaaagcaatgattagtgacatgaga |
108 |
Q |
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| T |
45460918 |
cgaaaaatatgcaacctcaacgaggccaaaacataacagaaagcatgcagatatcatcaaattcttctcccaatacaaagcaatgattagtgacatgaga |
45460819 |
T |
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| Q |
109 |
ctagttgtcacaagcattccacatattatagccaaacctgccacaaattgtgaacttaattaattacactattatgattttaatgtcattaacaaacaat |
208 |
Q |
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| T |
45460818 |
ctagttgtcacaagcattccacatattatagccaaacctaccacaaattgtgaacttaattaattacactattatgattttaatgtcattaacaaacgat |
45460719 |
T |
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| Q |
209 |
catgctaactgaatggtaaacaagttccatataaccatccttaatttaatcaaatcaaaagtactgtggttcggacataactgcactgtgcctgtgctgg |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45460718 |
catgctaactgaatggtaaacaagttccatataaccatccttaatttaatcaaatcaaaagtactgtggttcggacataactgcactgtgcctgtgctgg |
45460619 |
T |
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| Q |
309 |
tagtatatattaaacatcaattcttttatctgcattccctgtttagtt |
356 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45460618 |
tagtatatattaaacatcaattcttttatctgcattccctgtttagtt |
45460571 |
T |
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