View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14435_high_50 (Length: 304)

Name: NF14435_high_50
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14435_high_50
NF14435_high_50
[»] chr4 (40 HSPs)
chr4 (16-293)||(35034798-35035074)
chr4 (203-256)||(46620654-46620707)
chr4 (189-247)||(7438280-7438338)
chr4 (189-248)||(28494879-28494938)
chr4 (189-248)||(37830918-37830977)
chr4 (189-246)||(7067796-7067853)
chr4 (189-257)||(20702340-20702405)
chr4 (189-247)||(27551093-27551150)
chr4 (189-256)||(20702511-20702575)
chr4 (189-256)||(47931365-47931429)
chr4 (194-256)||(6196633-6196692)
chr4 (199-253)||(41169163-41169214)
chr4 (189-256)||(25458827-25458894)
chr4 (193-256)||(37143817-37143880)
chr4 (217-256)||(52954100-52954139)
chr4 (203-299)||(7059354-7059451)
chr4 (194-257)||(44470271-44470331)
chr4 (220-256)||(1580043-1580079)
chr4 (194-256)||(2358630-2358689)
chr4 (217-257)||(22852482-22852522)
chr4 (217-257)||(29097605-29097645)
chr4 (220-256)||(35447685-35447721)
chr4 (217-256)||(36802622-36802661)
chr4 (194-257)||(48737473-48737536)
chr4 (217-255)||(12214590-12214628)
chr4 (196-256)||(37143348-37143404)
chr4 (54-152)||(40704226-40704324)
chr4 (211-257)||(48736885-48736931)
chr4 (211-257)||(48737179-48737225)
chr4 (223-256)||(2548431-2548464)
chr4 (211-256)||(6386590-6386635)
chr4 (223-256)||(26088735-26088768)
chr4 (189-240)||(35104116-35104164)
chr4 (217-253)||(2133548-2133584)
chr4 (217-257)||(21122281-21122321)
chr4 (217-257)||(24427186-24427226)
chr4 (220-256)||(26054479-26054515)
chr4 (203-256)||(26427139-26427188)
chr4 (217-257)||(29629917-29629957)
chr4 (220-248)||(51400152-51400180)
[»] chr5 (37 HSPs)
chr5 (189-256)||(8990334-8990401)
chr5 (205-256)||(7649074-7649125)
chr5 (203-256)||(5769727-5769780)
chr5 (203-256)||(17064953-17065006)
chr5 (203-256)||(25782019-25782072)
chr5 (210-248)||(41862862-41862900)
chr5 (189-256)||(19128620-19128684)
chr5 (203-256)||(42207827-42207880)
chr5 (192-254)||(834223-834282)
chr5 (203-247)||(15232228-15232272)
chr5 (217-256)||(8786729-8786768)
chr5 (217-256)||(18526945-18526984)
chr5 (217-256)||(36226477-36226516)
chr5 (217-255)||(832192-832230)
chr5 (215-256)||(8839832-8839873)
chr5 (217-257)||(22702294-22702334)
chr5 (220-256)||(25754586-25754622)
chr5 (220-256)||(25793692-25793728)
chr5 (217-256)||(17210576-17210615)
chr5 (217-248)||(19650720-19650751)
chr5 (217-256)||(23206846-23206885)
chr5 (189-256)||(30735887-30735954)
chr5 (217-256)||(38697021-38697060)
chr5 (217-256)||(39850845-39850884)
chr5 (217-256)||(42516200-42516239)
chr5 (189-255)||(16611010-16611075)
chr5 (218-248)||(42918984-42919014)
chr5 (189-245)||(43007814-43007867)
chr5 (196-256)||(43370127-43370183)
chr5 (217-254)||(26269416-26269453)
chr5 (189-248)||(28766284-28766340)
chr5 (189-238)||(35627292-35627341)
chr5 (194-256)||(12659364-12659423)
chr5 (194-248)||(16312975-16313026)
chr5 (220-256)||(17916105-17916141)
chr5 (189-233)||(23270445-23270489)
chr5 (217-253)||(42097498-42097534)
[»] chr2 (36 HSPs)
chr2 (189-256)||(38692536-38692603)
chr2 (189-256)||(36080209-36080276)
chr2 (189-256)||(38702260-38702327)
chr2 (203-256)||(963284-963337)
chr2 (203-256)||(18072371-18072424)
chr2 (204-256)||(19063862-19063914)
chr2 (203-248)||(9415075-9415120)
chr2 (204-256)||(19064071-19064123)
chr2 (217-256)||(12069453-12069492)
chr2 (217-256)||(35959996-35960035)
chr2 (217-256)||(44020063-44020102)
chr2 (189-253)||(629600-629661)
chr2 (203-245)||(24004596-24004638)
chr2 (16-152)||(21691151-21691285)
chr2 (203-256)||(33134062-33134115)
chr2 (189-256)||(33676750-33676814)
chr2 (189-241)||(40497622-40497674)
chr2 (194-256)||(42651840-42651899)
chr2 (217-256)||(1071173-1071212)
chr2 (91-158)||(8516702-8516769)
chr2 (203-256)||(9243700-9243750)
chr2 (217-256)||(19813912-19813951)
chr2 (220-255)||(20718042-20718077)
chr2 (203-256)||(24100669-24100719)
chr2 (217-256)||(35125966-35126005)
chr2 (217-247)||(37609990-37610020)
chr2 (217-246)||(8839863-8839892)
chr2 (189-256)||(10553162-10553226)
chr2 (223-256)||(17372471-17372504)
chr2 (219-256)||(30977022-30977059)
chr2 (223-256)||(39271623-39271656)
chr2 (223-256)||(40301637-40301670)
chr2 (205-256)||(41122671-41122719)
chr2 (203-248)||(41633147-41633192)
chr2 (217-257)||(12413119-12413159)
chr2 (217-257)||(12425179-12425219)
[»] chr1 (43 HSPs)
chr1 (193-256)||(40808777-40808840)
chr1 (203-256)||(36421008-36421061)
chr1 (203-256)||(50943911-50943964)
chr1 (189-257)||(773727-773795)
chr1 (198-256)||(14386860-14386918)
chr1 (189-256)||(12267049-12267113)
chr1 (203-248)||(30055240-30055285)
chr1 (194-253)||(46022374-46022430)
chr1 (189-241)||(19285486-19285538)
chr1 (217-256)||(11344948-11344987)
chr1 (189-256)||(11408964-11409031)
chr1 (217-256)||(13303952-13303991)
chr1 (209-256)||(24561228-24561275)
chr1 (217-256)||(31528644-31528683)
chr1 (203-245)||(5880835-5880877)
chr1 (217-254)||(8574025-8574062)
chr1 (16-152)||(26626779-26626913)
chr1 (189-256)||(34969365-34969429)
chr1 (189-248)||(48995470-48995526)
chr1 (16-152)||(49117207-49117341)
chr1 (217-256)||(115902-115941)
chr1 (196-257)||(1581222-1581279)
chr1 (217-256)||(8699290-8699329)
chr1 (217-256)||(12301025-12301064)
chr1 (217-256)||(13315114-13315153)
chr1 (217-248)||(13315250-13315281)
chr1 (217-256)||(16424493-16424532)
chr1 (217-256)||(21335045-21335084)
chr1 (194-251)||(29716903-29716957)
chr1 (217-256)||(33326790-33326829)
chr1 (203-256)||(33934156-33934206)
chr1 (217-256)||(47576730-47576769)
chr1 (217-256)||(48419998-48420037)
chr1 (217-256)||(52043387-52043426)
chr1 (214-256)||(5965781-5965823)
chr1 (217-251)||(29689411-29689445)
chr1 (203-237)||(44921971-44922005)
chr1 (189-256)||(21343882-21343946)
chr1 (189-256)||(21348747-21348811)
chr1 (223-256)||(36605518-36605551)
chr1 (217-245)||(14258706-14258734)
chr1 (203-248)||(23773397-23773438)
chr1 (189-256)||(47402821-47402886)
[»] chr6 (29 HSPs)
chr6 (203-256)||(14662358-14662411)
chr6 (203-257)||(32333311-32333365)
chr6 (189-253)||(33573324-33573388)
chr6 (203-248)||(34352232-34352277)
chr6 (203-248)||(4075946-4075991)
chr6 (204-256)||(30233286-30233338)
chr6 (189-248)||(13698272-13698330)
chr6 (217-256)||(17353115-17353154)
chr6 (203-256)||(28712008-28712058)
chr6 (217-256)||(32531134-32531173)
chr6 (203-256)||(19146190-19146241)
chr6 (194-257)||(6001398-6001458)
chr6 (189-248)||(7451745-7451801)
chr6 (189-248)||(10343426-10343482)
chr6 (217-256)||(10460135-10460174)
chr6 (217-256)||(14426652-14426691)
chr6 (217-256)||(14965244-14965283)
chr6 (217-256)||(22838346-22838385)
chr6 (217-256)||(23124404-23124443)
chr6 (203-256)||(20715831-20715882)
chr6 (217-255)||(22535086-22535124)
chr6 (203-256)||(13240729-13240782)
chr6 (203-256)||(13552549-13552601)
chr6 (219-256)||(30254382-30254419)
chr6 (194-256)||(8771737-8771796)
chr6 (217-257)||(11323337-11323376)
chr6 (220-256)||(12169912-12169948)
chr6 (197-248)||(28548691-28548740)
chr6 (217-257)||(29350486-29350526)
[»] chr3 (50 HSPs)
chr3 (203-256)||(25012609-25012662)
chr3 (203-294)||(21495554-21495645)
chr3 (194-248)||(1149389-1149443)
chr3 (189-248)||(3418776-3418832)
chr3 (203-256)||(41923328-41923381)
chr3 (188-256)||(533584-533652)
chr3 (217-257)||(5492507-5492547)
chr3 (203-247)||(31741172-31741216)
chr3 (194-247)||(3266921-3266971)
chr3 (189-256)||(17438779-17438846)
chr3 (217-256)||(21030602-21030641)
chr3 (189-256)||(27400085-27400152)
chr3 (217-256)||(50099018-50099057)
chr3 (210-256)||(21595158-21595204)
chr3 (194-256)||(49429174-49429236)
chr3 (194-257)||(19420168-19420228)
chr3 (189-256)||(22102404-22102468)
chr3 (189-256)||(22177352-22177416)
chr3 (189-248)||(35938800-35938856)
chr3 (189-256)||(45644105-45644169)
chr3 (194-256)||(5907338-5907397)
chr3 (217-257)||(28370437-28370477)
chr3 (217-257)||(28378259-28378299)
chr3 (217-257)||(28386077-28386117)
chr3 (217-256)||(3899808-3899847)
chr3 (217-256)||(5812124-5812163)
chr3 (217-256)||(14418989-14419028)
chr3 (217-256)||(14899897-14899936)
chr3 (217-248)||(28391345-28391376)
chr3 (217-256)||(29542112-29542151)
chr3 (203-256)||(30102564-30102614)
chr3 (217-256)||(37431515-37431554)
chr3 (217-256)||(40360333-40360372)
chr3 (217-256)||(45885806-45885845)
chr3 (221-255)||(9860397-9860431)
chr3 (189-245)||(12565527-12565580)
chr3 (189-245)||(13259926-13259979)
chr3 (203-248)||(32560126-32560172)
chr3 (218-256)||(53162356-53162394)
chr3 (223-256)||(4577847-4577880)
chr3 (223-256)||(14265811-14265844)
chr3 (219-256)||(18722151-18722188)
chr3 (215-256)||(29749587-29749628)
chr3 (211-244)||(33713039-33713072)
chr3 (189-256)||(38809361-38809425)
chr3 (203-257)||(3890219-3890270)
chr3 (217-245)||(13155482-13155510)
chr3 (217-245)||(42391918-42391946)
chr3 (217-257)||(49428266-49428306)
chr3 (203-245)||(49429706-49429745)
[»] chr8 (41 HSPs)
chr8 (203-248)||(12838556-12838601)
chr8 (189-247)||(34180034-34180092)
chr8 (203-247)||(14438536-14438580)
chr8 (189-244)||(93129-93184)
chr8 (203-256)||(7019952-7020004)
chr8 (203-256)||(17840960-17841013)
chr8 (203-256)||(26536350-26536402)
chr8 (203-256)||(45488969-45489021)
chr8 (217-257)||(25722808-25722848)
chr8 (194-256)||(2692062-2692122)
chr8 (218-252)||(3369507-3369541)
chr8 (203-256)||(5182668-5182722)
chr8 (203-241)||(20285783-20285821)
chr8 (203-241)||(21072412-21072450)
chr8 (203-248)||(8512129-8512174)
chr8 (203-248)||(8517939-8517984)
chr8 (220-256)||(1554785-1554821)
chr8 (194-256)||(38498489-38498548)
chr8 (217-256)||(3739588-3739627)
chr8 (217-248)||(15872095-15872126)
chr8 (217-256)||(18638223-18638262)
chr8 (217-256)||(26784661-26784700)
chr8 (217-256)||(29684244-29684283)
chr8 (217-256)||(34966709-34966748)
chr8 (203-256)||(41942505-41942555)
chr8 (210-256)||(16326625-16326671)
chr8 (217-247)||(28969647-28969677)
chr8 (223-256)||(4418416-4418449)
chr8 (203-248)||(8514169-8514214)
chr8 (203-248)||(8522617-8522661)
chr8 (189-256)||(15919571-15919635)
chr8 (189-256)||(26527322-26527385)
chr8 (189-248)||(38804604-38804660)
chr8 (220-256)||(288782-288818)
chr8 (220-248)||(1566247-1566275)
chr8 (194-240)||(6165918-6165961)
chr8 (194-244)||(10865191-10865238)
chr8 (194-248)||(18279395-18279446)
chr8 (189-256)||(24852460-24852524)
chr8 (224-256)||(28205450-28205482)
chr8 (203-245)||(32856648-32856687)
[»] scaffold0707 (1 HSPs)
scaffold0707 (189-253)||(404-468)
[»] scaffold0013 (1 HSPs)
scaffold0013 (189-256)||(41569-41634)
[»] chr7 (28 HSPs)
chr7 (189-256)||(21766227-21766295)
chr7 (189-256)||(19371709-19371773)
chr7 (203-256)||(25489846-25489899)
chr7 (203-256)||(38175125-38175178)
chr7 (189-253)||(48525886-48525949)
chr7 (194-247)||(23161045-23161099)
chr7 (16-152)||(35937624-35937758)
chr7 (207-256)||(39389518-39389566)
chr7 (203-256)||(39434629-39434682)
chr7 (203-254)||(45000969-45001017)
chr7 (189-245)||(5800732-5800788)
chr7 (217-253)||(7628695-7628731)
chr7 (189-256)||(21635341-21635406)
chr7 (203-253)||(25610612-25610659)
chr7 (217-248)||(20034981-20035012)
chr7 (217-248)||(20045392-20045423)
chr7 (217-256)||(31283501-31283540)
chr7 (203-256)||(36609860-36609910)
chr7 (217-248)||(39151800-39151831)
chr7 (217-256)||(48103790-48103829)
chr7 (194-254)||(48624809-48624866)
chr7 (223-256)||(16849091-16849124)
chr7 (203-257)||(2275662-2275713)
chr7 (194-248)||(15971022-15971073)
chr7 (203-247)||(16683283-16683327)
chr7 (203-247)||(17657519-17657563)
chr7 (203-256)||(47901769-47901818)
chr7 (211-247)||(48109630-48109666)
[»] scaffold0196 (1 HSPs)
scaffold0196 (203-241)||(9230-9268)
[»] scaffold0268 (1 HSPs)
scaffold0268 (203-253)||(21589-21638)
[»] scaffold0037 (2 HSPs)
scaffold0037 (203-252)||(57088-57137)
scaffold0037 (203-252)||(64213-64262)
[»] scaffold0097 (1 HSPs)
scaffold0097 (220-255)||(21879-21914)
[»] scaffold0649 (1 HSPs)
scaffold0649 (203-256)||(8457-8510)
[»] scaffold0445 (1 HSPs)
scaffold0445 (217-254)||(4840-4877)
[»] scaffold0118 (1 HSPs)
scaffold0118 (223-256)||(14765-14798)
[»] scaffold0002 (1 HSPs)
scaffold0002 (217-245)||(151478-151506)


Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 35035074 - 35034798
Alignment:
Q  16 ttttgaacttgctgacaaaacattctactattatatacatgttgattttcgcaagacttctctcgcgtttgttcgagaggtctacaacacaagtagaacg 115  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35035074 ttttgaacttgctgacaaaacattctactattata--catgttgattttcgcaagacttctctcgcgtttgttcgagaggtctacaacacaagtagaaag 35034977  T
Q  116 gatcaatttctcataaagttttgtctagaatttgaggctgtcaaatgggttttgctcaataggaatatcgtcctttctttattccagttatacccttaaa 215  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35034976 gatcaatttctcataaaattttgtctagaatttgaggctgtcaaatggattttgctcaataggaatatcgtcctttctttatcccagttatacccttaaa 35034877  T
Q  216 caacaactttttctataataaagattgttgttgttgtcattg-nnnnnnnnngaatttagattatattttttcttatat 293  Q
    |||||||||||| |||||||||||||||||||||||||||||          |||||||||||||||||||||||||||    
T  35034876 caacaactttttttataataaagattgttgttgttgtcattgaaaaaaaaaagaatttagattatattttttcttatat 35034798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 46620707 - 46620654
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46620707 ttatacccttaaacaacaactttttctataataaagattgttgttggtgtcatt 46620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 7438338 - 7438280
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7438338 tttcattatcccaattatacccttaaacaacaactttttctataataaagattgttgtt 7438280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 28494879 - 28494938
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  28494879 tttcattatcccaattatactcttaaacaacaactttttctataataaagattgttgttg 28494938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 37830918 - 37830977
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  37830918 tttcattatcccaattatacccttaaacaacaactttttctataatagagattgttgttg 37830977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 7067853 - 7067796
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgt 246  Q
    |||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  7067853 tttcattatcccaattataccattaaacaacaactttttctataataaagattgttgt 7067796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 20702340 - 20702405
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||| |||||||| |||||||||||||||   |||||||||||||||||||| ||||||| ||||||||    
T  20702340 tttcattattccaattatacccttaaaca---actttttctataataaagatcgttgttggtgtcattg 20702405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 27551150 - 27551093
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  27551150 tttcattatcccaattatacccttaaacaacaactttttctataataaa-attgttgtt 27551093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 20702511 - 20702575
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||||| |||||||||||||||   |||||||||||||||||||| ||||||| |||||||    
T  20702511 tttcattattccaattatacccttaaaca---actttttctataataaagatcgttgttggtgtcatt 20702575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 47931429 - 47931365
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||| ||| |||||||||||||||||   ||||| |||||||||||||||||||| |||||||    
T  47931429 tttctttatcccaattatacccttaaacaac---tttttatataataaagattgttgttggtgtcatt 47931365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 6196633 - 6196692
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||| |||||||||||||||   ||||||| |||||||||||||||||||| |||||||    
T  6196633 ttattccaattatacccttaaaca---actttttgtataataaagattgttgttggtgtcatt 6196692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 41169163 - 41169214
Alignment:
Q  199 ccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||| ||||    
T  41169163 ccagttatacccttaaaca---actttttctataataaagattgttgttggtgtc 41169214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 25458827 - 25458894
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||| |||| ||||||| |||||||| || |||||||||||||||||||||| ||| |||||||    
T  25458827 tttcattaatccaattatacctttaaacaataattttttctataataaagattgtttttggtgtcatt 25458894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 37143880 - 37143817
Alignment:
Q  193 tttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| ||| |||||| |||||||||||||||||| ||||||| ||||||||| || |||||||    
T  37143880 tttatcccaattatactcttaaacaacaactttttttataatagagattgttgatggtgtcatt 37143817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 52954100 - 52954139
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  52954100 aacaactttttctataataaagattgttgttggtgtcatt 52954139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 7059354 - 7059451
Alignment:
Q  203 ttatacccttaaacaacaactttttct-ataataaagattgttgttgttgtcattgnnnnnnnnngaatttagattatattttttcttatattcttgg 299  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||| |||| ||          |||||||||||||||||||| ||||||| ||||    
T  7059354 ttatactcttaaacaacaacttttttttataataaagattgttgttggtgtcgttaaaaaaataagaatttagattatattttttgttatattgttgg 7059451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 44470271 - 44470331
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||| ||| |||||||||||||||   |||||||||||||||||||||||||||| ||| ||||    
T  44470271 ttatcccaattatacccttaaaca---actttttctataataaagattgttgttggtgttattg 44470331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 1580079 - 1580043
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||||| |||||||    
T  1580079 aactttttctataataaagattgttgttgatgtcatt 1580043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 2358630 - 2358689
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||| |||||||||||||||   ||||||||||||||||| |||||||||| |||||||    
T  2358630 ttatcccaattatacccttaaaca---actttttctataataaaaattgttgttggtgtcatt 2358689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 22852482 - 22852522
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  22852482 aacaactttttctataataaagattgttgttggtgttattg 22852522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 29097605 - 29097645
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  29097605 aacaactttttctataataaagattgttgttggtgttattg 29097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 35447721 - 35447685
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||||| |||||||    
T  35447721 aactttttctataataaagattgttgttggtgtcatt 35447685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 36802661 - 36802622
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  36802661 aacaactttgtctataataaagattgttgttggtgtcatt 36802622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 48737536 - 48737473
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||| ||| ||||||  |||||||| |||||||||||||||||| |||||||||  ||||||||    
T  48737536 ttatcccaattatacttttaaacaataactttttctataataaatattgttgttagtgtcattg 48737473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 12214628 - 12214590
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcat 255  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  12214628 aacaactttttctataataaaaattgttgttggtgtcat 12214590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 37143404 - 37143348
Alignment:
Q  196 attccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||| |||||||||||||||||   ||||||||||||||| |||||||||| |||||||    
T  37143404 attccaattatacccttaaacaac---tttttctataataaa-attgttgttggtgtcatt 37143348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 40704226 - 40704324
Alignment:
Q  54 atgttgattttcgcaagacttctctcgcgtttgttcgagaggtctacaacacaagtagaacggatcaatttctcataaagttttgtctagaatttgagg 152  Q
    |||||||| ||| |||| |||||||||||  ||| | ||||||||||||||| |||||    |||||||||||||| ||| || |||  ||||||||||    
T  40704226 atgttgatgttcccaaggcttctctcgcggctgtccaagaggtctacaacactagtaggcgtgatcaatttctcatgaagcttcgtccggaatttgagg 40704324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 48736931 - 48736885
Alignment:
Q  211 ttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||| |||||||||||||||||| |||||||||  ||||||||    
T  48736931 ttaaacaataactttttctataataaatattgttgttagtgtcattg 48736885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 48737225 - 48737179
Alignment:
Q  211 ttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||| |||||||||||||||||| |||||||||  ||||||||    
T  48737225 ttaaacaataactttttctataataaatattgttgttagtgtcattg 48737179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 2548431 - 2548464
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  2548431 tttttctataataaagattgttgttggtgtcatt 2548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 6386590 - 6386635
Alignment:
Q  211 ttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||| ||| ||||||||||| |||||||||| |||||||    
T  6386590 ttaaacaacaaatttgtctataataaaaattgttgttgatgtcatt 6386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 26088735 - 26088768
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||| |||||||||||||||||||    
T  26088735 tttttctataataatgattgttgttgttgtcatt 26088768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 35104164 - 35104116
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagat 240  Q
    |||| |||||||| ||||||||||   |||||||||||||||||||||||||    
T  35104164 tttcattattccaattataccctt---caacaactttttctataataaagat 35104116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 2133548 - 2133584
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtc 253  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  2133548 aacaattttttctataataaagattgttgttggtgtc 2133584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 21122281 - 21122321
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||| |||||||||||||| |||||||||| ||||||||    
T  21122281 aacaaccttttctataataaatattgttgttggtgtcattg 21122321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 24427186 - 24427226
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||| ||||||||||||||| || |||||    
T  24427186 aacaactttttctatactaaagattgttgttggtgccattg 24427226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 26054515 - 26054479
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||| |||||| |||||||    
T  26054515 aactttttctataataaagatttttgttggtgtcatt 26054479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 26427188 - 26427139
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||    ||||||||||||||||||||| ||| |||||||    
T  26427188 ttatacccttaaacaac----ttttctataataaagattgttattggtgtcatt 26427139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 29629957 - 29629917
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  29629957 aacaactttttctataataaaaattattgttggtgtcattg 29629917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 51400180 - 51400152
Alignment:
Q  220 aactttttctataataaagattgttgttg 248  Q
    |||||||||||||||||||||||||||||    
T  51400180 aactttttctataataaagattgttgttg 51400152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 8990334 - 8990401
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  8990334 tttcattatcccagttatacccttaaacaacagctttttctataataaagattgttgttggtgtcatt 8990401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 7649125 - 7649074
Alignment:
Q  205 atacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7649125 atacccttaaacaacaactttttctataataaagattgttgttggtgtcatt 7649074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 5769727 - 5769780
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| |||||||    
T  5769727 ttatactcttaaacaacaactttttctttaataaagattgttgttggtgtcatt 5769780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 17065006 - 17064953
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  17065006 ttatacccttaaaaaacaattttttctataataaagattgttgttggtgtcatt 17064953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 25782072 - 25782019
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  25782072 ttatacccttaaacaacaattttttctataataaaaattgttgttggtgtcatt 25782019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 41862862 - 41862900
Alignment:
Q  210 cttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41862862 cttaaacaacaactttttctataataaagattgttgttg 41862900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 19128684 - 19128620
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||||| |||||||||||||||||   |||||||||||||||||| ||||||| |||||||    
T  19128684 tttcattattccaattatacccttaaacaac---tttttctataataaagatcgttgttggtgtcatt 19128620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 42207827 - 42207880
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  42207827 ttataccattaaataacaactttttttataataaagattgttgttggtgtcatt 42207880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 834282 - 834223
Alignment:
Q  192 ctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtca 254  Q
    |||||| ||| |||||||||||||||||   |||||||||||||||||||||||||| |||||    
T  834282 ctttatcccaattatacccttaaacaac---tttttctataataaagattgttgttggtgtca 834223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 15232272 - 15232228
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    |||||| |||||||||||||||||||||||||||| |||||||||    
T  15232272 ttatacacttaaacaacaactttttctataataaaaattgttgtt 15232228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 8786768 - 8786729
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  8786768 aacaactttttctataataaagattgttgttggtgtcatt 8786729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 18526945 - 18526984
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  18526945 aacaactttttctataataaagattgttgttggtgtcatt 18526984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 36226477 - 36226516
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  36226477 aacaactttttctataataaagattgttgttggtgtcatt 36226516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 832192 - 832230
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcat 255  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  832192 aacaactttttctataataaagattgttgttggtgtcat 832230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 8839832 - 8839873
Alignment:
Q  215 acaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  8839832 acaataactttttctataataaagattgttgttggtgtcatt 8839873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 22702294 - 22702334
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  22702294 aacaactttttctataagaaagattgttgttggtgtcattg 22702334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 25754622 - 25754586
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||||| |||||||    
T  25754622 aactttttctataataaagattgttgttggtgtcatt 25754586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 25793692 - 25793728
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||||| |||||||    
T  25793692 aactttttctataataaagattgttgttggtgtcatt 25793728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 17210576 - 17210615
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  17210576 aacaattttttctataataaagattgttgttggtgtcatt 17210615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 19650720 - 19650751
Alignment:
Q  217 aacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||    
T  19650720 aacaactttttctataataaagattgttgttg 19650751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 23206846 - 23206885
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  23206846 aacaactttttttataataaagattgttgttggtgtcatt 23206885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 30735954 - 30735887
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||| |||| ||||||||||||||||| ||||| || ||||||| |||||||    
T  30735954 tttcattatcccaattatactcttatacaacaactttttctattataaatatcgttgttggtgtcatt 30735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 38697060 - 38697021
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  38697060 aacaattttttctataataaagattgttgttggtgtcatt 38697021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 39850845 - 39850884
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  39850845 aacaaatttttctataataaagattgttgttggtgtcatt 39850884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 42516200 - 42516239
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  42516200 aacaactttttctataataaaaattgttgttggtgtcatt 42516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 16611075 - 16611010
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcat 255  Q
    |||| |||| ||| |||||| ||||||||||||| ||||||||||| |||||| |||||| ||||||    
T  16611075 tttcattatcccaattatactcttaaacaacaac-ttttctataatgaagattattgttggtgtcat 16611010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 42919014 - 42918984
Alignment:
Q  218 acaactttttctataataaagattgttgttg 248  Q
    |||||||||||||||||||||||||||||||    
T  42919014 acaactttttctataataaagattgttgttg 42918984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 43007867 - 43007814
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    |||| |||| ||| |||||||||||||||||   |||||||||||||||||||||||    
T  43007867 tttcattatcccaattatacccttaaacaac---tttttctataataaagattgttg 43007814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 43370127 - 43370183
Alignment:
Q  196 attccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||| |||||||||||||||   ||||||||||||||||| |||||||||| |||||||    
T  43370127 attccaattatacccttaaaca---actttttctataataaa-attgttgttggtgtcatt 43370183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 26269416 - 26269453
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtca 254  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  26269416 aacaactttttctataataaagatagttgttggtgtca 26269453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 28766284 - 28766340
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||| |||||||||| |||||||||    ||||||||||||||||||||||||||    
T  28766284 tttcattatcccagttatactcttaaacaat---tttttctataataaagattgttgttg 28766340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 35627341 - 35627292
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaag 238  Q
    |||| |||| ||| |||||||||||| |||||| ||||||||||||||||    
T  35627341 tttcattatcccaattatacccttaatcaacaagtttttctataataaag 35627292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 12659423 - 12659364
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||| |||||||||||||||||   ||||| |||||||||||||||||||  |||||||    
T  12659423 ttatcccaattatacccttaaacaac---tttttttataataaagattgttgttagtgtcatt 12659364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 16312975 - 16313026
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||||||||||||||||||   |||||||||| |||||||||| ||||||    
T  16312975 ttatcccagttatacccttaaaca---actttttctacaataaagattattgttg 16313026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 17916141 - 17916105
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||| |||||||||||||||||||| |||||||    
T  17916141 aactttttatataataaagattgttgttggtgtcatt 17916105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 23270445 - 23270489
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataa 233  Q
    |||| |||| ||| ||||||||||||||||||||||||| |||||    
T  23270445 tttcattatcccaattatacccttaaacaacaactttttatataa 23270489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 42097498 - 42097534
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtc 253  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  42097498 aacaactttttctataataaagattgatgttggtgtc 42097534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 38692536 - 38692603
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  38692536 tttcattattccaattatacccttaaacaacaactttttctataataaagattgttattggtgtcatt 38692603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 36080209 - 36080276
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  36080209 tttcattatcccaattatacccttaaacaacaattttttctataataaagattgttgttggtgtcatt 36080276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 38702327 - 38702260
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  38702327 tttctttatctcaattatacctttaaacaacaactttttctataataaagattgttgttggtgtcatt 38702260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 963337 - 963284
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  963337 ttatacccttaaacaacaactttttttataataaagattgttgttggtgtcatt 963284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 18072371 - 18072424
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  18072371 ttatacccttaagcaacaactttttctataataaagattgttgttggtgtcatt 18072424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 19063862 - 19063914
Alignment:
Q  204 tatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  19063862 tataccattaaacaacaactttttctataataaagattgttgttggtgtcatt 19063914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 9415120 - 9415075
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9415120 ttatacccttaaacaacaactttttctataataaaaattgttgttg 9415075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 19064071 - 19064123
Alignment:
Q  204 tatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  19064071 tatacccttaaacaataactttttctataataaagattgttgttcgtgtcatt 19064123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 12069453 - 12069492
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  12069453 aacaactttttctataataaagattgttgttggtgtcatt 12069492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 35959996 - 35960035
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35959996 aacaactttttctataataaaaattgttgttgttgtcatt 35960035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 44020102 - 44020063
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  44020102 aacaactttttctataataaagattgttgttggtgtcatt 44020063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 629600 - 629661
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    |||| ||||||||||||||||||||   ||||| |||||||||||||||||||||| ||| ||||    
T  629600 tttcattattccagttataccctta---aacaattttttctataataaagattgtttttggtgtc 629661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 24004638 - 24004596
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  24004638 ttatacctttatacaacaactttttctataataaagattgttg 24004596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 21691151 - 21691285
Alignment:
Q  16 ttttgaacttgctgacaaaacattctactattatatacatgttgattttcgcaagacttctctcgcgtttgttcgagaggtctacaacacaagtagaacg 115  Q
    ||||||||||   |||| |||| ||||||||||||  |||| |||| ||| |||| ||||||| ||| |||||| ||||||| ||||||| |||||        
T  21691151 ttttgaacttatggacagaacactctactattata--catgctgatgttcccaaggcttctctggcggttgttcaagaggtccacaacactagtaggcgt 21691248  T
Q  116 gatcaatttctcataaagttttgtctagaatttgagg 152  Q
    |||||||||||||| ||| || |||  ||||||||||    
T  21691249 gatcaatttctcatgaagcttcgtccggaatttgagg 21691285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 33134115 - 33134062
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||| |||||||    
T  33134115 ttatacccttaaacaacaaatttttctataacaaagattcatgttggtgtcatt 33134062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 33676814 - 33676750
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| ||||||||||||||||    |||||||||||||||||||||||||| |||||||    
T  33676814 tttcattatcccaattatacccttaaacaat---tttttctataataaagattgttgttggtgtcatt 33676750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 40497674 - 40497622
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagatt 241  Q
    |||| |||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  40497674 tttcattatcccaattatacccttaaagaaccactttttctataataaagatt 40497622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 42651840 - 42651899
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||| |||||||||||||||   ||||||| ||| |||||||||||||||| |||||||    
T  42651840 ttattccaattatacccttaaaca---actttttttattataaagattgttgttggtgtcatt 42651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 1071212 - 1071173
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  1071212 aacaattttttctataataaagattgttgttgatgtcatt 1071173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 8516769 - 8516702
Alignment:
Q  91 agaggtctacaacacaagtagaacggatcaatttctcataaagttttgtctagaatttgaggctgtca 158  Q
    |||||||||||||||||| || | ||||||||||||||  ||| |  ||||||||||||||| |||||    
T  8516769 agaggtctacaacacaaggaggagggatcaatttctcaagaagctccgtctagaatttgaggttgtca 8516702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 9243750 - 9243700
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||   ||||||||||||| ||||||||||||||| ||||||||    
T  9243750 ttatacccttaaa---caactttttctatcataaagattgttgttattgtcatt 9243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 19813951 - 19813912
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  19813951 aacaattttttctataataaagattgttgttggtgtcatt 19813912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 20718042 - 20718077
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcat 255  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20718042 aactttttctataataaagattgttgttgctgtcat 20718077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 24100669 - 24100719
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||| |   ||||||||||||||||||||||||| |||||||    
T  24100669 ttatacccttaaacaata---ttttctataataaagattgttgttggtgtcatt 24100719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 35126005 - 35125966
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  35126005 aacaactttttcaataataaagattgttgttggtgtcatt 35125966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 37609990 - 37610020
Alignment:
Q  217 aacaactttttctataataaagattgttgtt 247  Q
    |||||||||||||||||||||||||||||||    
T  37609990 aacaactttttctataataaagattgttgtt 37610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 246
Target Start/End: Original strand, 8839863 - 8839892
Alignment:
Q  217 aacaactttttctataataaagattgttgt 246  Q
    ||||||||||||||||||||||||||||||    
T  8839863 aacaactttttctataataaagattgttgt 8839892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 10553162 - 10553226
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||||||    |||||||||||||| |||||||||| |||||||    
T  10553162 tttcgttatcccaattatacccttaaacaacg---ttttctataataaaaattgttgttggtgtcatt 10553226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 17372471 - 17372504
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  17372471 tttttctataataaagattgttgttggtgtcatt 17372504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 30977059 - 30977022
Alignment:
Q  219 caactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  30977059 caactttttatataataaagattgttgttggtgtcatt 30977022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 39271656 - 39271623
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  39271656 tttttctataataaagattgttgttggtgtcatt 39271623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 40301670 - 40301637
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  40301670 tttttctataataaagattgttgttgatgtcatt 40301637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 41122671 - 41122719
Alignment:
Q  205 atacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||   |||| |||||||||||||||||||| |||||||    
T  41122671 atacccttaaacaaca---ttttttataataaagattgttgttggtgtcatt 41122719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 41633147 - 41633192
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||| |||||||| || |||||| |||||||||||||||||||    
T  41633147 ttatacctttaaacaataattttttcaataataaagattgttgttg 41633192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 12413159 - 12413119
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  12413159 aacaactttttctataataaatatcgttgttgatgtcattg 12413119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 12425219 - 12425179
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  12425219 aacaactttttctataataaatatcgttgttgatgtcattg 12425179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 40808840 - 40808777
Alignment:
Q  193 tttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40808840 tttatcccaattatacccttaaacaacaactttttctataataaagattgttgttggtgtcatt 40808777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 36421008 - 36421061
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  36421008 ttataaccttaaacaacaactttttctataataaagatagttgttggtgtcatt 36421061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 50943964 - 50943911
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||||    
T  50943964 ttatacccttaaacaaaaactttttttataataaagattgttgttggtgtcatt 50943911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 773727 - 773795
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||| |||| ||| |||||||||||||||| || ||||||||||||||||| |||||||| ||||||||    
T  773727 tttcattatcccaattatacccttaaacaataattttttctataataaagactgttgttggtgtcattg 773795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 14386860 - 14386918
Alignment:
Q  198 tccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||||||||| |||||| ||| |||||||||||||||||||||| |||||||    
T  14386860 tccaattatacccttaagcaacaattttctctataataaagattgttgttgatgtcatt 14386918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 12267049 - 12267113
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||||| || |||||||||||||||   |||||||||||||||||||||||||||| |||||||    
T  12267049 tttcattatttcaattatacccttaaaca---actttttctataataaagattgttgttggtgtcatt 12267113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 30055240 - 30055285
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  30055240 ttatacccttaagcaacaacttttactataataaagattgttgttg 30055285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 46022374 - 46022430
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||    
T  46022374 ttattccagttatacccttaaacaat---tttttctataataaagattgttgttggtgtc 46022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 19285538 - 19285486
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagatt 241  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  19285538 tttcattatcccaattatacccttaaacaaaaactttttctataataaagatt 19285486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 11344948 - 11344987
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  11344948 aacaactttttctataataaagattgttgttggtgtcatt 11344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 11408964 - 11409031
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||| ||||| |||||  |||||||||||||||||||||||||| |||||||    
T  11408964 tttcattatcccatttatactcttaatcaacatatttttctataataaagattgttgttggtgtcatt 11409031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 13303952 - 13303991
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  13303952 aacaactttttctataataaagattgttgttggtgtcatt 13303991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 24561228 - 24561275
Alignment:
Q  209 ccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||    
T  24561228 ccttaaacaacagttttttctataataaagattgttgttggtgtcatt 24561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 31528644 - 31528683
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  31528644 aacaactttttctataataaagattgttgttggtgtcatt 31528683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 5880877 - 5880835
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  5880877 ttatacccttaaataacaactttttctataataaatattgttg 5880835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 8574025 - 8574062
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtca 254  Q
    |||||||||||||||||||||||||||||||| |||||    
T  8574025 aacaactttttctataataaagattgttgttggtgtca 8574062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 26626913 - 26626779
Alignment:
Q  16 ttttgaacttgctgacaaaacattctactattatatacatgttgattttcgcaagacttctctcgcgtttgttcgagaggtctacaacacaagtagaacg 115  Q
    |||||||||||  |||| |||| ||| ||||||||  |||| |||| ||| |||| |||||||||||  ||| | ||||||||||||||| |||||        
T  26626913 ttttgaacttgtggacagaacactctgctattata--catgctgatgttcccaaggcttctctcgcggctgtccaagaggtctacaacactagtaggcgt 26626816  T
Q  116 gatcaatttctcataaagttttgtctagaatttgagg 152  Q
    |||||||||||||| ||| || |||  ||||||||||    
T  26626815 gatcaatttctcatgaagcttcgtccggaatttgagg 26626779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 34969429 - 34969365
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||||| |||||| |||||||||    |||||||||||||||||||||||||| |||||||    
T  34969429 tttcattattccaattatactcttaaacaat---tttttctataataaagattgttgttggtgtcatt 34969365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 48995526 - 48995470
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||||||||||||||||||||| ||    ||||||||||||||||||||||||||    
T  48995526 tttcattattccagttatacccttaaataat---tttttctataataaagattgttgttg 48995470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 49117207 - 49117341
Alignment:
Q  16 ttttgaacttgctgacaaaacattctactattatatacatgttgattttcgcaagacttctctcgcgtttgttcgagaggtctacaacacaagtagaacg 115  Q
    |||||||||||  |||| |||| ||| ||||||||  |||| |||| ||| |||| |||||||||||  ||| | ||||||||||||||| |||||        
T  49117207 ttttgaacttgtggacagaacactctgctattata--catgctgatgttcccaaggcttctctcgcggctgtccaagaggtctacaacactagtaggcgt 49117304  T
Q  116 gatcaatttctcataaagttttgtctagaatttgagg 152  Q
    |||||||||||||| ||| || |||  ||||||||||    
T  49117305 gatcaatttctcatgaagcttcgtccggaatttgagg 49117341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 115941 - 115902
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  115941 aacaactttttatataataaagattgttgttggtgtcatt 115902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 1581279 - 1581222
Alignment:
Q  196 attccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||| |||||||||||||||||   ||||||||||||||| |||||||||| ||||||||    
T  1581279 attccaattatacccttaaacaac---tttttctataataaa-attgttgttgatgtcattg 1581222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 8699290 - 8699329
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  8699290 aacacctttttctataataaagattgttgttggtgtcatt 8699329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 12301025 - 12301064
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  12301025 aacaactttttctataataaaaattgttgttggtgtcatt 12301064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 13315153 - 13315114
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  13315153 aacaactttttctattataaagattgttgttggtgtcatt 13315114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 13315281 - 13315250
Alignment:
Q  217 aacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||    
T  13315281 aacaactttttctataataaagattgttgttg 13315250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 16424493 - 16424532
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  16424493 aacaactttttctataataaggattgttgttggtgtcatt 16424532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 21335084 - 21335045
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  21335084 aacaactttttctataataaagattgtcgttggtgtcatt 21335045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 29716903 - 29716957
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttg 251  Q
    |||| ||| ||||||||||||||||    |||||||||||||||||||||||||||||    
T  29716903 ttatcccaattatacccttaaacaat---tttttctataataaagattgttgttgttg 29716957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 33326829 - 33326790
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  33326829 aacaactttttctataataaatattgttgttggtgtcatt 33326790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 33934206 - 33934156
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||| |||||||    
T  33934206 ttatacccttagacaaca---ttttctataataaagattgttgttgatgtcatt 33934156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 47576769 - 47576730
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  47576769 aacaactttttctataataaatattgttgttggtgtcatt 47576730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 48419998 - 48420037
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  48419998 aacaactttttctataataaagatcgttgttggtgtcatt 48420037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 52043387 - 52043426
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  52043387 aacaactttttctataataaagatttttgttggtgtcatt 52043426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 5965823 - 5965781
Alignment:
Q  214 aacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||| ||||||||||| |||||| |||||||    
T  5965823 aacaacaactttttctttaataaagattattgttgatgtcatt 5965781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 29689411 - 29689445
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttg 251  Q
    ||||| |||||||||||||||||||||||||||||    
T  29689411 aacaattttttctataataaagattgttgttgttg 29689445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 44922005 - 44921971
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaa 237  Q
    ||||||||||||||||||| |||||||||||||||    
T  44922005 ttatacccttaaacaacaattttttctataataaa 44921971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 21343882 - 21343946
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||| | ||||||||||||||||    |||| ||||||||||||||||||||| |||||||    
T  21343882 tttcattattcgaattatacccttaaacaat---ttttactataataaagattgttgttggtgtcatt 21343946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 21348747 - 21348811
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||| | ||||||||||||||||    |||| ||||||||||||||||||||| |||||||    
T  21348747 tttcattattcgaattatacccttaaacaat---ttttactataataaagattgttgttggtgtcatt 21348811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 36605551 - 36605518
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  36605551 tttttctataataaagattgttgttggtgtcatt 36605518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 14258734 - 14258706
Alignment:
Q  217 aacaactttttctataataaagattgttg 245  Q
    |||||||||||||||||||||||||||||    
T  14258734 aacaactttttctataataaagattgttg 14258706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 23773438 - 23773397
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||    ||||||||||||||||||||||||||    
T  23773438 ttatacccttaaacaa----tttttctataataaagattgttgttg 23773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 47402886 - 47402821
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||  | || ||||| |||||||||||||||| |||||||||||    
T  47402886 tttcattatcccaattatacccttaaa--ataattttttatataataaagattgtttttgttgtcatt 47402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 14662411 - 14662358
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14662411 ttatacccttaaacaacaactttttctataataaagattgttgttggtgtcatt 14662358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 32333365 - 32333311
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  32333365 ttatacccttaaacaacaactttttccataataaagattgttgttggtgtcattg 32333311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 33573324 - 33573388
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  33573324 tttcattattccaattatacccttaaataacaattttttctataataaagattgttgttggtgtc 33573388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 34352277 - 34352232
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  34352277 ttatactcttaaacaacaactttttctataataaagattgttgttg 34352232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 4075991 - 4075946
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||    
T  4075991 ttatacccttaaacaacaactttttctataataaaggttgatgttg 4075946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 30233286 - 30233338
Alignment:
Q  204 tatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||| |||||||    
T  30233286 tatacccttaaacaacaattttttctataacaaagatcgttgttggtgtcatt 30233338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 13698272 - 13698330
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||||||| ||||||||||||| || |||||||||||||||||| ||||||||||    
T  13698272 tttcattattccaattatacccttaaaaaa-aactttttctataataaatattgttgttg 13698330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 17353115 - 17353154
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  17353115 aacaactttttctataataaagattgttgttggtgtcatt 17353154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 28712058 - 28712008
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||   |||||||||||||||||||||||||||||| |||||||    
T  28712058 ttatacccttaaa---caactttttctataataaagattgttgttggtgtcatt 28712008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 32531134 - 32531173
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  32531134 aacaactttttctataataaagattgttgttggtgtcatt 32531173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 19146241 - 19146190
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||  |||||||||||||||||||||| |||| |||||||    
T  19146241 ttatacccttaaacaac--ctttttctataataaagattgtcgttgatgtcatt 19146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 6001458 - 6001398
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||| ||| |||||||||||||||||   |||||||||||||||||||||||||| ||| ||||    
T  6001458 ttatcccaattatacccttaaacaac---tttttctataataaagattgttgttggtgttattg 6001398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 7451801 - 7451745
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| ||||| |||||||||| |||||||||   ||||||||||||||||||||||||||    
T  7451801 tttcattatttcagttataccattaaacaac---tttttctataataaagattgttgttg 7451745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 10343482 - 10343426
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||||||| |||||||||||||||||   |||||||||||||||||| |||||||    
T  10343482 tttcattattccaattatacccttaaacaac---tttttctataataaagatggttgttg 10343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 10460135 - 10460174
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  10460135 aacaactttttctataataaagatcgttgttggtgtcatt 10460174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 14426652 - 14426691
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  14426652 aacaactttttatataataaagattgttgttgatgtcatt 14426691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 14965244 - 14965283
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  14965244 aacaactttttctataataaagatggttgttggtgtcatt 14965283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 22838385 - 22838346
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  22838385 aacaactttttctataataaagattgttgatgatgtcatt 22838346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 23124404 - 23124443
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  23124404 aacaactttttctaaaataaagattgttgttggtgtcatt 23124443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 20715831 - 20715882
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||    |||||||||||||||||||||||||| |||||||    
T  20715831 ttatacccttaaacaatt--tttttctataataaagattgttgttggtgtcatt 20715882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 22535124 - 22535086
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcat 255  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  22535124 aacaactttttctataataaatattgttgttggtgtcat 22535086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 13240782 - 13240729
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||   || || |||||||||||||||||||| |||||||    
T  13240782 ttatacccttaaacaactttttcttatataataaagattgttgttgatgtcatt 13240729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 13552549 - 13552601
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||  |||||||    
T  13552549 ttatacccttcaacaacaacttttt-tatattaaagattgttgtttgtgtcatt 13552601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 30254419 - 30254382
Alignment:
Q  219 caactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||  |||||||    
T  30254419 caactttttctataataaagattgttgtttgtgtcatt 30254382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 8771796 - 8771737
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||| |||||||||| |||||    ||||||||||||||||||| |||||| |||||||    
T  8771796 ttattccaattatacccttgaacaat---tttttctataataaagattattgttggtgtcatt 8771737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 11323337 - 11323376
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  11323337 aacaactttttctataataaa-attgttgttggtgtcattg 11323376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 12169948 - 12169912
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  12169948 aactttttctataataaagatcgttgttggtgtcatt 12169912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 28548691 - 28548740
Alignment:
Q  197 ttccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||| ||||||||||||||||    ||||||||||||||||||||||||||    
T  28548691 ttccaattatacccttaaacaatt--tttttctataataaagattgttgttg 28548740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 29350486 - 29350526
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    ||||| |||||||||||||| ||||||||||| ||||||||    
T  29350486 aacaattttttctataataatgattgttgttggtgtcattg 29350526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 25012662 - 25012609
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25012662 ttatacccttaaacaacaactttttctataataaagatagttgttgttgtcatt 25012609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 21495554 - 21495645
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattgnnnnnnnnngaatttagattatattttttcttatatt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |          |||||||||||||||||||| |||||||    
T  21495554 ttatacccttaaacaacaactttttctataataaagattgttgttggtgtcagtaaacaaataagaatttagattatattttttgttatatt 21495645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 1149443 - 1149389
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||    
T  1149443 ttatcccaattatacccttgaacaacaactttttatataataaagattgttgttg 1149389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 3418776 - 3418832
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||||||| |||||||||||||||   ||||||||||||||||||||||||||||    
T  3418776 tttcattattccaattatacccttaaaca---actttttctataataaagattgttgttg 3418832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 41923328 - 41923381
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||| |||||||    
T  41923328 ttatacccttaaacaacaactttctttataataaaaattgttgttggtgtcatt 41923381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 533652 - 533584
Alignment:
Q  188 ctttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||| ||| ||||| ||||||||||||| ||||||||||| ||| |||||||||| |||||||    
T  533652 ctttcattatcccaattatatccttaaacaacaattttttctataacaaaaattgttgttggtgtcatt 533584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 5492547 - 5492507
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  5492547 aacaactttttctataataaagattgttgttgatgtcattg 5492507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 31741172 - 31741216
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  31741172 ttatacccttaaacaacaactttttttataatagagattgttgtt 31741216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 3266971 - 3266921
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    |||||||| |||||||||||||||||   |||||||||||||||||||||||||    
T  3266971 ttattccaattatacccttaaacaac---tttttctataataaagattgttgtt 3266921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 17438846 - 17438779
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||| |||||||||||||||||| | |||||||||||||| ||| |||||||    
T  17438846 tttcgttatcccaattatactcttaaacaacaactttttttctaataaagattgttattggtgtcatt 17438779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 21030641 - 21030602
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  21030641 aacaactttttctataataaagattgttgttggtgtcatt 21030602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 27400152 - 27400085
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||||| || ||||| |||| |||||||||||||||||| ||||||| |||||||| |||||||    
T  27400152 tttcattatttcatttataaccttgaacaacaactttttctatcataaagaatgttgttggtgtcatt 27400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 50099018 - 50099057
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  50099018 aacaactttttctataataaagattgttgttggtgtcatt 50099057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 21595204 - 21595158
Alignment:
Q  210 cttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||| ||||||| |||||||||| |||||||    
T  21595204 cttaaacaacaactttttctttaataaatattgttgttgatgtcatt 21595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 49429236 - 49429174
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| || ||||||||| |||||| ||| || |||||||||||||||||||||| |||||||    
T  49429236 ttatttcaattataccctaaaacaaaaaccttgtctataataaagattgttgttggtgtcatt 49429174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 19420228 - 19420168
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||| ||| |||||||||||||||||   |||||||||||||||||||||||||| ||| ||||    
T  19420228 ttatcccaattatacccttaaacaac---tttttctataataaagattgttgttggtgttattg 19420168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 22102404 - 22102468
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||||   |||||||| ||||||||||||||||||| |||||||    
T  22102404 tttcattatcccaattatacccttaaaca---actttttccataataaagattgttgttggtgtcatt 22102468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 22177352 - 22177416
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||||   |||||||| ||||||||||||||||||| |||||||    
T  22177352 tttcattatcccaattatacccttaaaca---actttttccataataaagattgttgttggtgtcatt 22177416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 35938800 - 35938856
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||||| ||| |||||||||||||||   ||||||| ||||||||||||||||||||    
T  35938800 tttctttatcccaattatacccttaaaca---actttttatataataaagattgttgttg 35938856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 45644105 - 45644169
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||||   ||||||||||||||||||||||| |||| |||||||    
T  45644105 tttcattatcccaattatacccttaaaca---actttttctataataaagattgtcgttggtgtcatt 45644169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 5907397 - 5907338
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| || |||||||||||||||||   ||||| |||||||||||||||||||| |||||||    
T  5907397 ttatttcaattatacccttaaacaac---tttttatataataaagattgttgttggtgtcatt 5907338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 28370437 - 28370477
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  28370437 aacaactttttctataataaagattgttgttggtgttattg 28370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 28378259 - 28378299
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  28378259 aacaactttttctataataaagattgttgttggtgttattg 28378299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 28386077 - 28386117
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  28386077 aacaactttttctataataaagattgttgttggtgttattg 28386117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 3899847 - 3899808
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  3899847 aacaattttttctataataaagattgttgttgatgtcatt 3899808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 5812163 - 5812124
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  5812163 aacaactttttctataataaagatcgttgttggtgtcatt 5812124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 14418989 - 14419028
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  14418989 aacaattttttctataataaagattgttgttgatgtcatt 14419028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 14899897 - 14899936
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  14899897 aacaactttttatataataaagattgttgttggtgtcatt 14899936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 28391345 - 28391376
Alignment:
Q  217 aacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||    
T  28391345 aacaactttttctataataaagattgttgttg 28391376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 29542151 - 29542112
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  29542151 aacaactttttctataataaagattgttgtttatgtcatt 29542112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 30102614 - 30102564
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||   |||||||||||||||||||||| ||||||| |||||||    
T  30102614 ttatacccttaaa---caactttttctataataaagatcgttgttggtgtcatt 30102564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 37431515 - 37431554
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  37431515 aacaactttttctataataaagattgatgttggtgtcatt 37431554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 40360333 - 40360372
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  40360333 aacaattttttctataataaagattgttgttggtgtcatt 40360372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 45885806 - 45885845
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  45885806 aacaattttttctataataaagattgttgttggtgtcatt 45885845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 9860431 - 9860397
Alignment:
Q  221 actttttctataataaagattgttgttgttgtcat 255  Q
    |||||||||||||||||||||||||||| ||||||    
T  9860431 actttttctataataaagattgttgttggtgtcat 9860397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 12565580 - 12565527
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    |||| |||||||| ||||||| |||||||||   |||||||||||||||||||||||    
T  12565580 tttcattattccaattatacctttaaacaac---tttttctataataaagattgttg 12565527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 13259979 - 13259926
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    |||| |||||||| ||||||| |||||||||   |||||||||||||||||||||||    
T  13259979 tttcattattccaattatacctttaaacaac---tttttctataataaagattgttg 13259926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 32560126 - 32560172
Alignment:
Q  203 ttatacccttaaacaacaactttt-tctataataaagattgttgttg 248  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  32560126 ttatacccttaaacaacaaattttctctataataaaaattgttgttg 32560172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 53162394 - 53162356
Alignment:
Q  218 acaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  53162394 acaactttttctataattaagattgttgttggtgtcatt 53162356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 4577880 - 4577847
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  4577880 tttttctataataaagattgttgttggtgtcatt 4577847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 14265811 - 14265844
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  14265811 tttttctataataaagattgttgttgatgtcatt 14265844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 18722188 - 18722151
Alignment:
Q  219 caactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  18722188 caactttttctataataaatattgttgttggtgtcatt 18722151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 29749587 - 29749628
Alignment:
Q  215 acaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  29749587 acaacaactttttttataataaagattgttgatggtgtcatt 29749628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 33713039 - 33713072
Alignment:
Q  211 ttaaacaacaactttttctataataaagattgtt 244  Q
    ||||||||||||||||||| ||||||||||||||    
T  33713039 ttaaacaacaactttttctgtaataaagattgtt 33713072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 38809425 - 38809361
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||| |||| |||||||||||||||||   |||||| ||||||||||||||||||  |||||||    
T  38809425 tttcattactccaattatacccttaaacaac---tttttcaataataaagattgttgtttgtgtcatt 38809361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 3890270 - 3890219
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||   |||||||||||| ||||||||||||||||| | ||||||    
T  3890270 ttatacccttaaa---caactttttctacaataaagattgttgttggtttcattg 3890219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 13155510 - 13155482
Alignment:
Q  217 aacaactttttctataataaagattgttg 245  Q
    |||||||||||||||||||||||||||||    
T  13155510 aacaactttttctataataaagattgttg 13155482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 42391946 - 42391918
Alignment:
Q  217 aacaactttttctataataaagattgttg 245  Q
    |||||||||||||||||||||||||||||    
T  42391946 aacaactttttctataataaagattgttg 42391918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 49428306 - 49428266
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||| ||||||||||||||||| ||| ||||    
T  49428306 aacaactttttctacaataaagattgttgttgatgttattg 49428266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 49429745 - 49429706
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    |||||||||||||   |||||||||||||||||||||||||||    
T  49429745 ttatacccttaaa---caactttttctataataaagattgttg 49429706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 12838556 - 12838601
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12838556 ttatacccttaaacaacaactttttctataataaagattgttgttg 12838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 34180034 - 34180092
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    |||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  34180034 tttcattatcccaattataaccttaaacaacaactttttctataataaagattgttgtt 34180092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 14438580 - 14438536
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  14438580 ttataaccttaaacaacaactttttctataataaagattgttgtt 14438536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 93184 - 93129
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgtt 244  Q
    |||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  93184 tttcattatcccaattatacccttaaacaataactttttctataataaagattgtt 93129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 7019952 - 7020004
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7019952 ttatatccttaaacaacaacttttt-tataataaagattgttgttggtgtcatt 7020004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 17840960 - 17841013
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||| |||||||    
T  17840960 ttatacccttaaacaataactttttctatgataaagatcgttgttggtgtcatt 17841013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 26536402 - 26536350
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  26536402 ttatacccttaaacaataa-tttttctataataaagattgttgttggtgtcatt 26536350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 45488969 - 45489021
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  45488969 ttatacccttaaacaacaacttttt-tataataaaaattgttgttggtgtcatt 45489021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 25722808 - 25722848
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  25722808 aacaactttttctataataaagattgttgttggtgtcattg 25722848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 2692122 - 2692062
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||| |||||||||||||||||   ||||| |||||||||||||||||||| |||||||    
T  2692122 ttattccaattatacccttaaacaact--tttttttataataaagattgttgttggtgtcatt 2692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 3369541 - 3369507
Alignment:
Q  218 acaactttttctataataaagattgttgttgttgt 252  Q
    |||||||||||||||||||||||||||||||||||    
T  3369541 acaactttttctataataaagattgttgttgttgt 3369507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 5182722 - 5182668
Alignment:
Q  203 ttatacccttaaacaacaacttttt-ctataataaagattgttgttgttgtcatt 256  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||    
T  5182722 ttataccctaaaacaacaacttttttctataataaagattattgttggtgtcatt 5182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 20285821 - 20285783
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagatt 241  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  20285821 ttatacccttaaacaacaattttttctataataaagatt 20285783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 21072450 - 21072412
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagatt 241  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21072450 ttatacccttaaacaacaattttttctataataaagatt 21072412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 8512174 - 8512129
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||    
T  8512174 ttatacctttaaacaacaacttttttaataataaagattgttgttg 8512129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 8517984 - 8517939
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||    
T  8517984 ttatacctttaaacaacaacttttttaataataaagattgttgttg 8517939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 1554785 - 1554821
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||||| |||||||    
T  1554785 aactttttctataataaagattgttgttggtgtcatt 1554821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 38498489 - 38498548
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| ||| |||||||||||||||   |||||||||| ||||||||||||||||| |||||||    
T  38498489 ttatcccaattatacccttaaaca---actttttctacaataaagattgttgttggtgtcatt 38498548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 3739588 - 3739627
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  3739588 aacaactttttctataataaaggttgttgttggtgtcatt 3739627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 15872126 - 15872095
Alignment:
Q  217 aacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||    
T  15872126 aacaactttttctataataaagattgttgttg 15872095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 18638223 - 18638262
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  18638223 aacaattttttctataataaagattgttgttgatgtcatt 18638262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 26784661 - 26784700
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  26784661 aacaactttttctataataaagattgttgtcggtgtcatt 26784700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 29684244 - 29684283
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  29684244 aacaactttttctataataaagatcgttgttggtgtcatt 29684283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 34966709 - 34966748
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  34966709 aacaactttttctataataaagatttttgttggtgtcatt 34966748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 41942555 - 41942505
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||   |||||||||||||||||||||||||||| | |||||||    
T  41942555 ttatacccttaaa---caactttttctataataaagattgttgtgggtgtcatt 41942505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 16326625 - 16326671
Alignment:
Q  210 cttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||||    
T  16326625 cttaaacaacaactttttatataataaaaattgttcttggtgtcatt 16326671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 28969677 - 28969647
Alignment:
Q  217 aacaactttttctataataaagattgttgtt 247  Q
    |||||||||||||||||||||||||||||||    
T  28969677 aacaactttttctataataaagattgttgtt 28969647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 4418416 - 4418449
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  4418416 tttttctataataaagattgttgttgatgtcatt 4418449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 8514214 - 8514169
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||| |||||||||||||||||  |||||||| ||||||||||    
T  8514214 ttatacctttaaacaacaacttttttaataataaaaattgttgttg 8514169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 8522661 - 8522617
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  8522661 ttatacctttaaacaa-aactttttcaataataaagattgttgttg 8522617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 15919635 - 15919571
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||||||   ||| ||||||||||||| |||||||| |||||||    
T  15919635 tttcattatcccaattatacccttaaacaac---tttctctataataaagaatgttgttggtgtcatt 15919571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 26527385 - 26527322
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||| ||| || |||||||||||||||||   ||||||||||||||| |||||||||| |||||||    
T  26527385 tttcttcatttcaattatacccttaaacaac---tttttctataataaa-attgttgttggtgtcatt 26527322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 38804660 - 38804604
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||| |||| |||||||||| |||||||| |   ||||||||||||||||||||||||||    
T  38804660 tttcattatcccagttatactcttaaacacc---tttttctataataaagattgttgttg 38804604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 288782 - 288818
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||| | |||||||    
T  288782 aactttttctataataaagattgttgtcggtgtcatt 288818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 1566247 - 1566275
Alignment:
Q  220 aactttttctataataaagattgttgttg 248  Q
    |||||||||||||||||||||||||||||    
T  1566247 aactttttctataataaagattgttgttg 1566275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 6165918 - 6165961
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagat 240  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||    
T  6165918 ttattccaattataccctt---caacaactttttctataataaagat 6165961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 10865238 - 10865191
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgtt 244  Q
    |||| ||| |||||||||||||||||   ||||||||||||||||||||||    
T  10865238 ttatcccaattatacccttaaacaac---tttttctataataaagattgtt 10865191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 18279446 - 18279395
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    |||||||| ||||||||||||| |||   |||||||||||||||||| |||||||    
T  18279446 ttattccaattatacccttaaataac---tttttctataataaagatggttgttg 18279395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 24852460 - 24852524
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| |||||||||||||||| | ||  ||||| ||||||||||||||||||||| |||||||    
T  24852460 tttcattatcccagttatacccttaa-ctac--cttttcctataataaagattgttgttggtgtcatt 24852524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 28205450 - 28205482
Alignment:
Q  224 ttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||| |||||||    
T  28205450 ttttctataataaagattgttgttgatgtcatt 28205482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 32856687 - 32856648
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    |||||||||||||   |||||||||||||||||||||||||||    
T  32856687 ttatacccttaaa---caactttttctataataaagattgttg 32856648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 468 - 404
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  468 tttcattattccaattatacccttaaataacaattttttctataataaagattgttgttggtgtc 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 41634 - 41569
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  41634 tttcattatcccaattatacccttaaacaact--tttttctataataaagattgttgttgttgtcatt 41569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 21766295 - 21766227
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaact-ttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  21766295 tttcattatcccaattatacccttaaacaacaacttttttttataataaagattgttgttggtgtcatt 21766227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 19371709 - 19371773
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||| ||| |||||||||||||||   |||||||||||||||||||||||||||| |||||||    
T  19371709 tttcattatcccaattatacccttaaaca---actttttctataataaagattgttgttggtgtcatt 19371773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 25489846 - 25489899
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||| |||||||    
T  25489846 ttatacctttaaacaacaactttttctatagtaaatattgttgttggtgtcatt 25489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 38175178 - 38175125
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||| |||||||    
T  38175178 ttatacccttaaacaacaactttttctataacaatgattgttcttggtgtcatt 38175125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 48525886 - 48525949
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    |||| ||||| || ||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  48525886 tttcattatttcaattataccct-aaacaacaattttttctataataaagattgttgttggtgtc 48525949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 23161099 - 23161045
Alignment:
Q  194 ttattccagttatacccttaaacaacaact-ttttctataataaagattgttgtt 247  Q
    |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  23161099 ttatcccaattatacccttaaacaacaacttttttttataataaagattgttgtt 23161045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 35937758 - 35937624
Alignment:
Q  16 ttttgaacttgctgacaaaacattctactattatatacatgttgattttcgcaagacttctctcgcgtttgttcgagaggtctacaacacaagtagaacg 115  Q
    |||||||||||  |||| |||| ||| ||||||||  |||| |||| ||| |||| |||||||||||  ||| | ||||||||||||||| |||||        
T  35937758 ttttgaacttgtggacagaacactctgctattata--catgctgatgttcccaaggcttctctcgcggctgtccaagaggtctacaacactagtaggcgt 35937661  T
Q  116 gatcaatttctcataaagttttgtctagaatttgagg 152  Q
    |||||||||||||| ||| || |||  ||||||||||    
T  35937660 gatcaatttctcatgaagcttcgtccggaatttgagg 35937624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 39389518 - 39389566
Alignment:
Q  207 acccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  39389518 acccttaaacaacaa-tttttctataataaagattgttgtttgtgtcatt 39389566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 39434682 - 39434629
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||  |||||||    
T  39434682 ttatactcttaaacaacaactttttcaataataacgattgttgttagtgtcatt 39434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 45001017 - 45000969
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtca 254  Q
    |||||||||||||   |||||||||||||||||||||||||||||| |||||    
T  45001017 ttatacccttaaa---caactttttctataataaagattgttgttgatgtca 45000969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 5800732 - 5800788
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttg 245  Q
    |||| |||| ||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  5800732 tttcattatcccaattatacccttaaataacaattttttctataataaagatcgttg 5800788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 7628695 - 7628731
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtc 253  Q
    |||||||||||||||||||||||||||||||| ||||    
T  7628695 aacaactttttctataataaagattgttgttgatgtc 7628731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 21635341 - 21635406
Alignment:
Q  189 tttctttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||| |||||||| ||||||||||||||||    |||||||||||||||||||||||||  |||||||    
T  21635341 tttcattattccaattatacccttaaacaatt--tttttctataataaagattgttgttagtgtcatt 21635406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 25610659 - 25610612
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    |||||||||||||   |||||||||||||||||||||||||||||| ||||    
T  25610659 ttatacccttaaa---caactttttctataataaagattgttgttgatgtc 25610612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 20034981 - 20035012
Alignment:
Q  217 aacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||    
T  20034981 aacaactttttctataataaagattgttgttg 20035012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 20045392 - 20045423
Alignment:
Q  217 aacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||    
T  20045392 aacaactttttctataataaagattgttgttg 20045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 31283540 - 31283501
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  31283540 aacaattttttctataataaagattgttgttggtgtcatt 31283501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 36609910 - 36609860
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||||||||   |||| |||||||||||||||||||||||||| |||||||    
T  36609910 ttatacccttaa---acaattttttctataataaagattgttgttggtgtcatt 36609860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 39151800 - 39151831
Alignment:
Q  217 aacaactttttctataataaagattgttgttg 248  Q
    ||||||||||||||||||||||||||||||||    
T  39151800 aacaactttttctataataaagattgttgttg 39151831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 48103829 - 48103790
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  48103829 aacaactttttctataataaagattgttgttagtgtcatt 48103790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 48624866 - 48624809
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttgttgtca 254  Q
    |||| ||| |||||||||||||||||   |||||||||||||||||| ||||||| |||||    
T  48624866 ttatcccaattatacccttaaacaac---tttttctataataaagatcgttgttggtgtca 48624809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 16849124 - 16849091
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  16849124 tttttctataataaagattgttgttgatgtcatt 16849091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 2275713 - 2275662
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcattg 257  Q
    |||||||||||||   ||||||||||||||||||| |||||||||| ||| ||||    
T  2275713 ttatacccttaaa---caactttttctataataaaaattgttgttggtgttattg 2275662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 15971022 - 15971073
Alignment:
Q  194 ttattccagttatacccttaaacaacaactttttctataataaagattgttgttg 248  Q
    ||||| || |||||||||||||||   ||||||||||||||||||||| ||||||    
T  15971022 ttatttcaattatacccttaaaca---actttttctataataaagattattgttg 15971073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 16683327 - 16683283
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    ||||||||||||||||||||||| ||  ||||||| |||||||||    
T  16683327 ttatacccttaaacaacaactttgtcagtaataaatattgttgtt 16683283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 17657563 - 17657519
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgtt 247  Q
    ||||||||||||||||||||||| ||  ||||||| |||||||||    
T  17657563 ttatacccttaaacaacaactttgtcagtaataaatattgttgtt 17657519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 47901769 - 47901818
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||    |||| |||||||||||||||||||| |||||||    
T  47901769 ttatacccttaaacaac----ttttttataataaagattgttgttggtgtcatt 47901818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 48109630 - 48109666
Alignment:
Q  211 ttaaacaacaactttttctataataaagattgttgtt 247  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  48109630 ttaaataacaactttttctgtaataaagattgttgtt 48109666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 9268 - 9230
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagatt 241  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9268 ttatacccttaaacaacaactttttctataataaagatt 9230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 21589 - 21638
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtc 253  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  21589 ttatacccttaaacaacag-tttttctataataaagattgttgttggtgtc 21638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 57088 - 57137
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgt 252  Q
    |||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  57088 ttatacccttaaacaataatattttctataataaagattgttgttattgt 57137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 64213 - 64262
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgt 252  Q
    |||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  64213 ttatacccttaaacaataatattttctataataaagattgttgttattgt 64262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 21879 - 21914
Alignment:
Q  220 aactttttctataataaagattgttgttgttgtcat 255  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21879 aactttttctataataaagattgttgttgctgtcat 21914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 8510 - 8457
Alignment:
Q  203 ttatacccttaaacaacaactttttctataataaagattgttgttgttgtcatt 256  Q
    ||||||| |||||||||| |||||||||||||||| | | |||||| |||||||    
T  8510 ttataccattaaacaacatctttttctataataaataatattgttggtgtcatt 8457  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 4840 - 4877
Alignment:
Q  217 aacaactttttctataataaagattgttgttgttgtca 254  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  4840 aacaattttttctataataaagattgttgttggtgtca 4877  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 14765 - 14798
Alignment:
Q  223 tttttctataataaagattgttgttgttgtcatt 256  Q
    |||||||||||||||||||||||||| |||||||    
T  14765 tttttctataataaagattgttgttgatgtcatt 14798  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Original strand, 151478 - 151506
Alignment:
Q  217 aacaactttttctataataaagattgttg 245  Q
    |||||||||||||||||||||||||||||    
T  151478 aacaactttttctataataaagattgttg 151506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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