View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14435_high_7 (Length: 560)
Name: NF14435_high_7
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14435_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 494; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 47364421 - 47364955
Alignment:
| Q |
8 |
gacatcatcactatgcttttttcaaagcacctaggtctcataactatgaatcttctccttttttaaagagttaatggaaatttcatatgatggataggat |
107 |
Q |
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| T |
47364421 |
gacatcatcactatgcttttttcaaagcacctaggtctcataactatgaatcttctccttttttaaagagtttatggaaatttcatatgatggataggat |
47364520 |
T |
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| Q |
108 |
aggtaatcaattttggatgttggatctcactcaatctacatcacatgcatcattattttaattctttgaactgtgtgcactattaaaattactgttaaga |
207 |
Q |
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| T |
47364521 |
aggtaatcaattttggatgttggttctcactcaatctacatcacatgcatcattattttaattctttgaactgtgtgcactattaaaattactgttaaga |
47364620 |
T |
|
| Q |
208 |
gtaaagttctcataacgtgcatgtttttggtctttgcaatgactacttttgcctataagtagctattatttctatgtcaagttcagcaaattgttcttcc |
307 |
Q |
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| T |
47364621 |
gtaaagttctcataacgtgcatgtttttggtctttgcaacgactacttttgcctataagtagctattatttctatgtcaagttcagcaaattgttcttcc |
47364720 |
T |
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| Q |
308 |
atttacagacaagtctaatgtctaagtttgcacctaaccattacttaaatcagttaaatgtctatttgcaaaccaaattctaagttgaaaccttctannn |
407 |
Q |
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| T |
47364721 |
atttacagacaagtctaatgtctaagtttgcacctaaccattacttaaatcagttaaatgtctatttgcaaaccaaattctaagttgaaaccttctattt |
47364820 |
T |
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| Q |
408 |
nnnncacatgaagatatttgtaaatttgtaattcatgcagaaaaagagaagactccaacgagcaatt-ttcagataacagaaactgaagttagtctgtgt |
506 |
Q |
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| T |
47364821 |
ttttcacatgaagatatttgtaaatttgtaattcatgcagaaaaagagaagactccaacgagcaattcttcagataacagaaactgaagttagtctgtgt |
47364920 |
T |
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| Q |
507 |
gatatttctaaatggccaagatgggttggtttagc |
541 |
Q |
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| T |
47364921 |
gatatttctaaatggccaagatgggttggtttagc |
47364955 |
T |
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