View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14435_high_81 (Length: 209)
Name: NF14435_high_81
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14435_high_81 |
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Alignment Details
Target: chr2 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 35994849 - 35994656
Alignment:
| Q |
1 |
actggtactggttgggaccctgcttttgctacgcctgaggaatgggattatgtgaagtggaagcattataagggacaagatgttcctattgctccttttt |
100 |
Q |
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| T |
35994849 |
actggtactggttgggaccctgctttggctacgcctgaggaatgggattatgtgaagtggaagcattataagggacaagatgttcctattgctccttttt |
35994750 |
T |
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| Q |
101 |
atcttccttataggaaacctattcctcctgtacctactaatcattctgttattaaaggtcctagagatgttattgaagaattggataggattga |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |
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| T |
35994749 |
atcttccttataggaaacctattcctcctgtacctactaatcattctgctattaaaggtcctaaaggtgttattgaagaattggataggattga |
35994656 |
T |
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