View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14435_low_1 (Length: 804)

Name: NF14435_low_1
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14435_low_1
NF14435_low_1
[»] chr2 (68 HSPs)
chr2 (6-625)||(40022432-40023049)
chr2 (655-768)||(40022282-40022395)
chr2 (435-616)||(23748166-23748342)
chr2 (436-606)||(31795767-31795932)
chr2 (435-625)||(36347538-36347723)
chr2 (435-516)||(17380007-17380088)
chr2 (435-595)||(9631652-9631807)
chr2 (473-625)||(39732764-39732910)
chr2 (438-625)||(19566820-19567003)
chr2 (549-625)||(16565837-16565915)
chr2 (436-519)||(35736350-35736433)
chr2 (439-514)||(36046205-36046280)
chr2 (439-591)||(34209560-34209707)
chr2 (438-503)||(35736175-35736240)
chr2 (434-521)||(8426875-8426962)
chr2 (562-625)||(41778835-41778898)
chr2 (557-603)||(7681332-7681378)
chr2 (436-506)||(15224870-15224940)
chr2 (556-625)||(2241472-2241541)
chr2 (438-511)||(22356175-22356248)
chr2 (476-615)||(15224732-15224866)
chr2 (438-486)||(17379846-17379894)
chr2 (438-506)||(36347717-36347785)
chr2 (464-625)||(36566876-36567033)
chr2 (443-510)||(8427043-8427110)
chr2 (547-602)||(18811413-18811468)
chr2 (556-603)||(37740004-37740051)
chr2 (556-602)||(17379897-17379943)
chr2 (440-506)||(35531832-35531898)
chr2 (436-506)||(42813796-42813866)
chr2 (542-603)||(12751899-12751960)
chr2 (433-506)||(16713487-16713560)
chr2 (562-606)||(8426990-8427034)
chr2 (438-506)||(45257483-45257551)
chr2 (562-613)||(886990-887041)
chr2 (436-487)||(41778771-41778822)
chr2 (435-521)||(2241579-2241665)
chr2 (440-506)||(9426987-9427053)
chr2 (440-482)||(36046401-36046443)
chr2 (455-505)||(39821686-39821736)
chr2 (440-506)||(41841684-41841750)
chr2 (436-520)||(7681406-7681488)
chr2 (565-606)||(29525855-29525896)
chr2 (473-521)||(1583238-1583286)
chr2 (565-625)||(2381109-2381169)
chr2 (561-597)||(20545799-20545835)
chr2 (444-511)||(31061530-31061598)
chr2 (562-606)||(35736256-35736300)
chr2 (438-506)||(42296479-42296547)
chr2 (549-625)||(45257369-45257445)
chr2 (438-521)||(9427147-9427230)
chr2 (556-603)||(12541850-12541897)
chr2 (446-481)||(15224153-15224188)
chr2 (542-625)||(28262542-28262625)
chr2 (435-506)||(34187572-34187643)
chr2 (473-520)||(39821831-39821878)
chr2 (657-691)||(17379842-17379876)
chr2 (445-487)||(31928062-31928104)
chr2 (445-507)||(31928224-31928286)
chr2 (556-617)||(3094466-3094527)
chr2 (565-606)||(6721744-6721785)
chr2 (556-617)||(9427055-9427116)
chr2 (436-501)||(17331413-17331478)
chr2 (562-607)||(21662328-21662372)
chr2 (549-602)||(33265691-33265744)
chr2 (657-694)||(36347755-36347792)
chr2 (556-597)||(41841772-41841813)
chr2 (562-607)||(45098249-45098294)
[»] chr4 (70 HSPs)
chr4 (438-625)||(54935130-54935313)
chr4 (438-616)||(54320505-54320678)
chr4 (436-605)||(45741972-45742136)
chr4 (438-520)||(37711285-37711367)
chr4 (438-616)||(31348316-31348494)
chr4 (440-625)||(27735807-27735987)
chr4 (436-625)||(41174407-41174591)
chr4 (436-616)||(49735466-49735641)
chr4 (438-625)||(5730830-5731012)
chr4 (435-506)||(1968535-1968606)
chr4 (435-506)||(6938423-6938494)
chr4 (556-625)||(35248748-35248817)
chr4 (532-616)||(36151647-36151729)
chr4 (441-510)||(46007873-46007942)
chr4 (434-506)||(54935063-54935136)
chr4 (442-506)||(27735749-27735813)
chr4 (435-506)||(7977673-7977744)
chr4 (436-503)||(31348500-31348567)
chr4 (438-521)||(37761625-37761708)
chr4 (556-606)||(6891441-6891491)
chr4 (446-595)||(17938115-17938259)
chr4 (556-606)||(47433821-47433871)
chr4 (436-506)||(56135747-56135817)
chr4 (531-599)||(45132591-45132657)
chr4 (438-487)||(49735687-49735736)
chr4 (434-479)||(53260714-53260759)
chr4 (440-521)||(54576329-54576410)
chr4 (438-510)||(26166937-26167009)
chr4 (556-616)||(26167008-26167068)
chr4 (438-510)||(47433881-47433953)
chr4 (562-625)||(37711205-37711268)
chr4 (562-625)||(43961472-43961535)
chr4 (562-605)||(46007820-46007863)
chr4 (435-506)||(54320432-54320502)
chr4 (556-607)||(54494719-54494769)
chr4 (438-520)||(1968351-1968433)
chr4 (532-625)||(1968450-1968541)
chr4 (436-506)||(24565344-24565414)
chr4 (436-521)||(5825057-5825142)
chr4 (440-505)||(47846233-47846298)
chr4 (562-607)||(55510250-55510295)
chr4 (531-606)||(16400881-16400954)
chr4 (453-521)||(21694905-21694973)
chr4 (435-483)||(37711135-37711183)
chr4 (556-604)||(44784075-44784123)
chr4 (434-505)||(21695065-21695136)
chr4 (446-513)||(35248855-35248922)
chr4 (562-625)||(56135811-56135874)
chr4 (435-509)||(2247974-2248048)
chr4 (433-486)||(5731027-5731080)
chr4 (433-521)||(47694344-47694433)
chr4 (556-616)||(2917076-2917136)
chr4 (562-594)||(21695008-21695040)
chr4 (547-606)||(22921062-22921122)
chr4 (547-606)||(22970677-22970737)
chr4 (556-604)||(28332887-28332935)
chr4 (562-625)||(18516590-18516653)
chr4 (435-510)||(29798285-29798360)
chr4 (556-607)||(34995131-34995182)
chr4 (556-603)||(47846168-47846215)
chr4 (657-696)||(54935283-54935322)
chr4 (548-606)||(2247908-2247965)
chr4 (549-603)||(17182591-17182645)
chr4 (433-507)||(22186714-22186788)
chr4 (436-506)||(51329794-51329864)
chr4 (562-595)||(23332653-23332686)
chr4 (562-591)||(41227576-41227605)
chr4 (657-690)||(47433923-47433956)
chr4 (440-505)||(47846440-47846505)
chr4 (435-520)||(55510331-55510415)
[»] chr8 (67 HSPs)
chr8 (435-625)||(31543069-31543254)
chr8 (441-625)||(16653011-16653190)
chr8 (438-625)||(11785588-11785770)
chr8 (438-520)||(31738585-31738667)
chr8 (444-603)||(36308927-36309081)
chr8 (436-615)||(41103502-41103678)
chr8 (436-625)||(40990179-40990366)
chr8 (438-521)||(43732848-43732931)
chr8 (442-606)||(30479721-30479880)
chr8 (435-625)||(9718486-9718661)
chr8 (433-520)||(34634305-34634392)
chr8 (446-606)||(11575415-11575569)
chr8 (438-521)||(3726863-3726946)
chr8 (531-625)||(7503044-7503136)
chr8 (473-625)||(1026884-1027030)
chr8 (435-521)||(30365291-30365377)
chr8 (556-606)||(42650449-42650499)
chr8 (453-520)||(1281305-1281372)
chr8 (435-506)||(8815317-8815388)
chr8 (438-505)||(31543249-31543316)
chr8 (531-616)||(37032450-37032533)
chr8 (436-521)||(16024315-16024399)
chr8 (556-616)||(6315133-6315193)
chr8 (438-521)||(34196470-34196551)
chr8 (442-520)||(10028285-10028363)
chr8 (556-606)||(28083823-28083873)
chr8 (442-507)||(11575581-11575646)
chr8 (438-506)||(12022142-12022211)
chr8 (438-506)||(2248452-2248520)
chr8 (531-606)||(30664442-30664515)
chr8 (438-505)||(7503131-7503198)
chr8 (438-521)||(8815141-8815224)
chr8 (438-505)||(9718656-9718723)
chr8 (548-603)||(10028194-10028249)
chr8 (436-483)||(12022342-12022389)
chr8 (436-506)||(1027024-1027094)
chr8 (444-506)||(1281149-1281211)
chr8 (556-606)||(4247630-4247680)
chr8 (440-510)||(30479889-30479959)
chr8 (531-616)||(33922591-33922674)
chr8 (436-482)||(43732677-43732723)
chr8 (437-506)||(7394637-7394706)
chr8 (556-625)||(7979202-7979271)
chr8 (562-607)||(12022262-12022307)
chr8 (436-521)||(24243048-24243131)
chr8 (562-603)||(35694874-35694915)
chr8 (438-483)||(40632996-40633041)
chr8 (468-520)||(2248614-2248666)
chr8 (438-478)||(2481977-2482017)
chr8 (556-616)||(11033488-11033548)
chr8 (441-517)||(24243212-24243287)
chr8 (438-506)||(30365130-30365198)
chr8 (565-605)||(34633819-34633859)
chr8 (562-602)||(38198168-38198208)
chr8 (440-511)||(28083744-28083815)
chr8 (556-603)||(29358452-29358499)
chr8 (562-597)||(30581929-30581964)
chr8 (562-612)||(27487065-27487115)
chr8 (562-616)||(31738494-31738548)
chr8 (562-616)||(37923197-37923251)
chr8 (441-510)||(37923250-37923320)
chr8 (441-478)||(2412967-2413004)
chr8 (563-616)||(3726975-3727028)
chr8 (440-481)||(16024155-16024196)
chr8 (562-595)||(24243166-24243199)
chr8 (562-607)||(27483640-27483685)
chr8 (545-602)||(42919831-42919888)
[»] chr7 (67 HSPs)
chr7 (436-597)||(4833529-4833685)
chr7 (434-625)||(47390917-47391104)
chr7 (438-606)||(40196532-40196695)
chr7 (441-603)||(34235010-34235167)
chr7 (436-616)||(25887263-25887438)
chr7 (436-521)||(18231747-18231832)
chr7 (438-625)||(41496957-41497139)
chr7 (455-625)||(1051517-1051680)
chr7 (433-625)||(13770943-13771128)
chr7 (478-625)||(33655148-33655290)
chr7 (531-618)||(34228408-34228493)
chr7 (441-521)||(42306491-42306571)
chr7 (435-596)||(13425117-13425273)
chr7 (438-521)||(33519209-33519292)
chr7 (435-506)||(39856041-39856112)
chr7 (438-506)||(36267553-36267621)
chr7 (435-521)||(30592250-30592336)
chr7 (438-520)||(48881558-48881640)
chr7 (556-625)||(24970278-24970347)
chr7 (556-612)||(22163222-22163278)
chr7 (556-612)||(22221930-22221986)
chr7 (436-506)||(1051674-1051744)
chr7 (435-521)||(10315794-10315880)
chr7 (436-506)||(37925839-37925909)
chr7 (435-506)||(13771122-13771193)
chr7 (439-506)||(31571646-31571713)
chr7 (438-505)||(47390855-47390922)
chr7 (556-606)||(17852952-17853002)
chr7 (438-504)||(40282197-40282263)
chr7 (562-603)||(18063680-18063721)
chr7 (438-483)||(36267752-36267797)
chr7 (444-505)||(37620951-37621012)
chr7 (440-521)||(45940658-45940739)
chr7 (438-482)||(25887192-25887236)
chr7 (557-617)||(26365838-26365898)
chr7 (441-505)||(33655285-33655349)
chr7 (436-483)||(33519046-33519093)
chr7 (562-625)||(33519110-33519173)
chr7 (562-625)||(39855984-39856047)
chr7 (434-513)||(43230404-43230483)
chr7 (435-510)||(48015379-48015454)
chr7 (562-595)||(20393693-20393726)
chr7 (436-481)||(28074101-28074146)
chr7 (532-603)||(41008267-41008334)
chr7 (441-506)||(43230239-43230304)
chr7 (438-510)||(16833870-16833942)
chr7 (441-505)||(26365945-26366009)
chr7 (438-506)||(34228495-34228563)
chr7 (556-616)||(37417746-37417806)
chr7 (556-607)||(35422044-35422095)
chr7 (532-606)||(43230317-43230389)
chr7 (434-473)||(48881758-48881797)
chr7 (436-470)||(17853072-17853106)
chr7 (565-603)||(23116382-23116420)
chr7 (440-482)||(23116428-23116470)
chr7 (438-484)||(31553185-31553230)
chr7 (659-689)||(39646467-39646497)
chr7 (563-625)||(40572354-40572416)
chr7 (444-506)||(41008188-41008250)
chr7 (568-606)||(48152061-48152099)
chr7 (562-591)||(18127361-18127390)
chr7 (438-483)||(28074307-28074352)
chr7 (556-589)||(31571581-31571614)
chr7 (564-597)||(33519416-33519449)
chr7 (440-481)||(37620776-37620817)
chr7 (434-471)||(40572444-40572481)
chr7 (562-603)||(48093977-48094018)
[»] chr1 (60 HSPs)
chr1 (438-603)||(40094933-40095093)
chr1 (438-625)||(2858932-2859114)
chr1 (436-625)||(30010394-30010578)
chr1 (438-625)||(41498466-41498649)
chr1 (436-617)||(8529869-8530045)
chr1 (440-521)||(12234171-12234252)
chr1 (436-625)||(35349464-35349644)
chr1 (438-616)||(38509894-38510067)
chr1 (435-606)||(32951318-32951481)
chr1 (441-513)||(20576136-20576208)
chr1 (435-597)||(50744282-50744435)
chr1 (531-616)||(51597739-51597822)
chr1 (435-487)||(20607412-20607464)
chr1 (435-506)||(12234007-12234078)
chr1 (435-505)||(41498401-41498471)
chr1 (433-506)||(35349638-35349711)
chr1 (436-606)||(7444576-7444741)
chr1 (556-606)||(42230619-42230669)
chr1 (556-605)||(44211018-44211067)
chr1 (433-521)||(2470725-2470813)
chr1 (438-506)||(30010332-30010400)
chr1 (436-520)||(47261433-47261517)
chr1 (442-505)||(35512974-35513037)
chr1 (442-603)||(41676363-41676516)
chr1 (437-483)||(26324013-26324059)
chr1 (556-606)||(26940956-26941006)
chr1 (436-502)||(38510074-38510140)
chr1 (532-625)||(45585776-45585867)
chr1 (562-616)||(49946707-49946761)
chr1 (438-507)||(28770896-28770965)
chr1 (438-506)||(32951494-32951562)
chr1 (531-606)||(36285664-36285737)
chr1 (562-625)||(1085609-1085672)
chr1 (435-506)||(10391869-10391940)
chr1 (434-505)||(35927810-35927881)
chr1 (436-483)||(51303382-51303429)
chr1 (436-482)||(1085487-1085533)
chr1 (436-510)||(40095106-40095180)
chr1 (445-506)||(2859108-2859169)
chr1 (442-606)||(10391953-10392108)
chr1 (562-607)||(33643348-33643393)
chr1 (563-612)||(42742430-42742478)
chr1 (549-618)||(50079490-50079559)
chr1 (433-477)||(1085695-1085739)
chr1 (446-506)||(25268440-25268500)
chr1 (436-520)||(26940842-26940925)
chr1 (438-506)||(40709292-40709360)
chr1 (438-506)||(43551996-43552064)
chr1 (562-613)||(2506613-2506664)
chr1 (562-625)||(12234072-12234135)
chr1 (562-625)||(25268326-25268389)
chr1 (563-594)||(49065548-49065579)
chr1 (562-625)||(51303695-51303757)
chr1 (440-502)||(23536782-23536844)
chr1 (438-507)||(525275-525344)
chr1 (441-506)||(7444481-7444546)
chr1 (657-690)||(26941047-26941080)
chr1 (657-690)||(30010329-30010362)
chr1 (562-603)||(51303503-51303544)
chr1 (442-503)||(51597672-51597733)
[»] chr5 (62 HSPs)
chr5 (440-625)||(7544198-7544378)
chr5 (439-616)||(13634782-13634954)
chr5 (435-616)||(16938550-16938726)
chr5 (441-515)||(11757070-11757144)
chr5 (440-606)||(26414974-26415136)
chr5 (438-625)||(37606957-37607138)
chr5 (438-607)||(37779183-37779347)
chr5 (440-521)||(1657974-1658055)
chr5 (438-625)||(37551470-37551649)
chr5 (438-625)||(37654300-37654479)
chr5 (438-606)||(10476109-10476272)
chr5 (435-625)||(8502832-8503017)
chr5 (438-521)||(14245207-14245290)
chr5 (436-521)||(14245086-14245171)
chr5 (436-503)||(13634709-13634776)
chr5 (436-506)||(26414891-26414961)
chr5 (443-616)||(36363103-36363271)
chr5 (490-602)||(36392202-36392309)
chr5 (438-521)||(15986624-15986707)
chr5 (436-506)||(7544134-7544204)
chr5 (434-521)||(10650423-10650512)
chr5 (556-625)||(9856942-9857011)
chr5 (556-616)||(2550465-2550525)
chr5 (531-606)||(10072737-10072810)
chr5 (438-486)||(16938479-16938527)
chr5 (442-501)||(2550533-2550592)
chr5 (562-625)||(11756939-11757002)
chr5 (466-605)||(20513473-20513611)
chr5 (438-505)||(33744193-33744260)
chr5 (438-505)||(34980987-34981054)
chr5 (441-606)||(9798615-9798775)
chr5 (438-603)||(28279476-28279636)
chr5 (473-517)||(2550387-2550431)
chr5 (434-470)||(10072653-10072689)
chr5 (435-511)||(11436936-11437012)
chr5 (434-478)||(20147074-20147118)
chr5 (438-478)||(40305670-40305710)
chr5 (438-521)||(2183975-2184058)
chr5 (436-483)||(10204574-10204621)
chr5 (435-502)||(10476023-10476090)
chr5 (435-506)||(36392325-36392396)
chr5 (440-487)||(42681450-42681497)
chr5 (441-479)||(21581150-21581188)
chr5 (440-506)||(34980812-34980878)
chr5 (436-510)||(40815295-40815369)
chr5 (438-511)||(10204747-10204820)
chr5 (570-607)||(10650509-10650546)
chr5 (557-606)||(17024338-17024387)
chr5 (436-505)||(28279654-28279723)
chr5 (436-481)||(40305866-40305911)
chr5 (438-482)||(5688590-5688634)
chr5 (562-614)||(33424921-33424973)
chr5 (562-625)||(4373685-4373748)
chr5 (434-505)||(11419188-11419259)
chr5 (435-482)||(12035933-12035980)
chr5 (436-483)||(15986823-15986870)
chr5 (657-691)||(5688604-5688638)
chr5 (657-691)||(14245260-14245294)
chr5 (435-509)||(14681467-14681540)
chr5 (556-606)||(14681550-14681600)
chr5 (562-616)||(42681524-42681578)
chr5 (562-607)||(10204656-10204701)
[»] chr3 (67 HSPs)
chr3 (438-606)||(24560298-24560461)
chr3 (440-606)||(41110323-41110484)
chr3 (444-625)||(27541937-27542113)
chr3 (438-602)||(41039950-41040109)
chr3 (438-606)||(36568904-36569066)
chr3 (548-625)||(46204948-46205025)
chr3 (435-506)||(25655148-25655219)
chr3 (438-602)||(9312476-9312630)
chr3 (438-625)||(18654600-18654782)
chr3 (436-521)||(34641151-34641236)
chr3 (436-509)||(28581184-28581257)
chr3 (435-606)||(16275702-16275868)
chr3 (440-606)||(52473996-52474157)
chr3 (556-625)||(21773844-21773913)
chr3 (438-625)||(25654971-25655154)
chr3 (438-521)||(24253883-24253966)
chr3 (556-606)||(14898057-14898107)
chr3 (436-506)||(24560215-24560285)
chr3 (433-506)||(28582685-28582758)
chr3 (440-520)||(26135959-26136039)
chr3 (434-603)||(37102155-37102308)
chr3 (436-487)||(5903547-5903598)
chr3 (435-510)||(6803373-6803448)
chr3 (435-506)||(41110497-41110568)
chr3 (444-505)||(10943620-10943681)
chr3 (440-521)||(13082856-13082937)
chr3 (438-506)||(220573-220641)
chr3 (547-615)||(2387864-2387932)
chr3 (434-482)||(8432257-8432305)
chr3 (435-511)||(14898151-14898227)
chr3 (440-520)||(23028088-23028168)
chr3 (549-625)||(26135859-26135935)
chr3 (473-521)||(30200123-30200171)
chr3 (562-625)||(21090190-21090253)
chr3 (440-482)||(42772046-42772088)
chr3 (433-486)||(18654797-18654850)
chr3 (438-503)||(25499074-25499139)
chr3 (436-506)||(30200267-30200341)
chr3 (531-603)||(52185100-52185170)
chr3 (442-511)||(55428550-55428619)
chr3 (442-478)||(31664391-31664427)
chr3 (442-478)||(31931969-31932005)
chr3 (547-603)||(40463975-40464031)
chr3 (549-625)||(42699718-42699794)
chr3 (548-604)||(54574466-54574522)
chr3 (566-625)||(651793-651852)
chr3 (563-606)||(10748417-10748460)
chr3 (556-607)||(10943727-10943778)
chr3 (436-507)||(16883972-16884042)
chr3 (435-506)||(17474382-17474453)
chr3 (436-479)||(24253719-24253762)
chr3 (434-473)||(36727384-36727423)
chr3 (556-591)||(37807176-37807211)
chr3 (562-625)||(40858627-40858690)
chr3 (531-617)||(43005829-43005913)
chr3 (565-616)||(46556214-46556265)
chr3 (562-625)||(48683674-48683737)
chr3 (556-603)||(51819238-51819285)
chr3 (442-476)||(10748299-10748333)
chr3 (444-506)||(10943790-10943852)
chr3 (436-482)||(44412359-44412405)
chr3 (562-596)||(49815512-49815546)
chr3 (562-607)||(16884090-16884135)
chr3 (562-607)||(37237003-37237047)
chr3 (562-603)||(42772116-42772157)
chr3 (562-603)||(44412445-44412486)
chr3 (445-510)||(51819146-51819210)
[»] chr6 (58 HSPs)
chr6 (434-616)||(30487302-30487478)
chr6 (434-602)||(9721134-9721297)
chr6 (434-597)||(9719027-9719185)
chr6 (436-625)||(33236013-33236196)
chr6 (434-593)||(1300714-1300868)
chr6 (439-521)||(10818377-10818459)
chr6 (438-505)||(14515648-14515715)
chr6 (443-625)||(19278039-19278220)
chr6 (436-506)||(14515471-14515541)
chr6 (441-510)||(31849113-31849182)
chr6 (440-520)||(1390481-1390561)
chr6 (435-511)||(10818226-10818302)
chr6 (436-606)||(21606852-21607007)
chr6 (441-511)||(4097684-4097754)
chr6 (439-521)||(16737997-16738079)
chr6 (436-505)||(665839-665907)
chr6 (435-480)||(9051734-9051779)
chr6 (439-504)||(9719208-9719273)
chr6 (440-520)||(34176497-34176576)
chr6 (531-596)||(4097602-4097665)
chr6 (441-625)||(5585304-5585484)
chr6 (531-616)||(25741478-25741561)
chr6 (547-604)||(2892707-2892764)
chr6 (441-506)||(19278214-19278278)
chr6 (438-521)||(9298647-9298735)
chr6 (556-616)||(12811094-12811153)
chr6 (562-606)||(13583800-13583844)
chr6 (435-483)||(23090992-23091040)
chr6 (556-616)||(31849181-31849241)
chr6 (565-616)||(2893701-2893752)
chr6 (562-613)||(26318379-26318430)
chr6 (434-468)||(4097504-4097538)
chr6 (435-509)||(16738169-16738242)
chr6 (547-625)||(30850016-30850094)
chr6 (435-472)||(1390316-1390353)
chr6 (446-483)||(23091158-23091195)
chr6 (562-595)||(32926737-32926770)
chr6 (438-510)||(12811152-12811224)
chr6 (562-614)||(16738115-16738167)
chr6 (441-505)||(26318482-26318546)
chr6 (490-521)||(12811035-12811066)
chr6 (438-477)||(15323225-15323264)
chr6 (438-477)||(15353364-15353403)
chr6 (657-691)||(1300625-1300659)
chr6 (565-603)||(5381305-5381343)
chr6 (572-606)||(6034201-6034235)
chr6 (438-504)||(9721315-9721381)
chr6 (435-509)||(10293421-10293494)
chr6 (565-607)||(14515551-14515593)
chr6 (562-596)||(16509371-16509405)
chr6 (441-507)||(21607019-21607085)
chr6 (441-487)||(30487500-30487546)
chr6 (567-605)||(33041552-33041590)
chr6 (556-606)||(34176416-34176466)
chr6 (436-473)||(4097233-4097270)
chr6 (565-606)||(25468521-25468562)
chr6 (658-691)||(31798914-31798947)
chr6 (441-510)||(33041473-33041542)
[»] scaffold0262 (1 HSPs)
scaffold0262 (436-616)||(16294-16469)
[»] scaffold0067 (2 HSPs)
scaffold0067 (438-606)||(39186-39353)
scaffold0067 (434-506)||(39366-39438)
[»] scaffold0198 (1 HSPs)
scaffold0198 (441-521)||(3150-3230)
[»] scaffold0171 (1 HSPs)
scaffold0171 (436-616)||(16021-16196)
[»] scaffold0294 (1 HSPs)
scaffold0294 (440-606)||(15344-15504)
[»] scaffold0007 (1 HSPs)
scaffold0007 (442-521)||(242377-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (436-507)||(17715-17784)
[»] scaffold0096 (2 HSPs)
scaffold0096 (438-510)||(6584-6656)
scaffold0096 (556-597)||(6674-6715)
[»] scaffold0026 (1 HSPs)
scaffold0026 (441-506)||(1175-1240)
[»] scaffold0012 (2 HSPs)
scaffold0012 (442-505)||(184784-184847)
scaffold0012 (657-690)||(184608-184641)
[»] scaffold0018 (1 HSPs)
scaffold0018 (562-614)||(69326-69378)
[»] scaffold0071 (1 HSPs)
scaffold0071 (433-467)||(53088-53122)


Alignment Details
Target: chr2 (Bit Score: 528; Significance: 0; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 6 - 625
Target Start/End: Complemental strand, 40023049 - 40022432
Alignment:
Q  6 agatacaacattctattttatgaatactcctaaacaagttccttatgttcaactgaggaagggcttcgaggtatgtggtatctagattgatgttttcttg 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40023049 agatacaacattctattttatgaatactcctaaacaagttccatatgttcaactgaggaagggcttcgaggtatgtggtatcttgattgatgttttcttg 40022950  T
Q  106 tctcgtaagagaaatgcaagagggaaattttggatttatgaatttttgtaaggtacgtgatgtatccaagttatccaagacattgaataatgtttagttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40022949 tctcgtaagagaaatgcaagagggaaattttggatttatgaatttttgtaaggtacgtgatgtatccaagttatccaagacattgaataatgtttagttt 40022850  T
Q  206 ggtcagtgtgggagaacccaactaggtttgataggttcaatattaaggtgcatgggctgaaagttcaagttggattgtatgttggtaatgttatttagag 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40022849 ggtcagtgtgggagaacccaactaggtttgataggttcaatattaaggtgcacgggctgaaagttcaagttggattgtatgttggtaatgttatttagag 40022750  T
Q  306 gacgacagtggttgtgaaagatcatatgtagagggaggaaagggagggcgagaatgagaacgggaagggaggttgggttgggtcgaagaaagaatgctga 405  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  40022749 gacgacaatggttgtgaaagatcatatgtagagggaggaaagggagggcgagaatgagaacgggaagggaggttgggttgggttgaagaaagaatgttga 40022650  T
Q  406 gggagaaaataagtgaggggataatagtattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||||||||||||  | ||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  40022649 gggagaaaataagtgaggggataataacactaaaggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaatta 40022550  T
Q  506 cagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaaca 605  Q
    ||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40022549 cagacactatgaaatg--tttttttaaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaaca 40022452  T
Q  606 ttgtatatagttcataattt 625  Q
    |  |||||||||||||||||    
T  40022451 tgttatatagttcataattt 40022432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 655 - 768
Target Start/End: Complemental strand, 40022395 - 40022282
Alignment:
Q  655 taccctcctaaaccgtcaatccaaacacaccctaagaagaatgaaggaggggttatgaaggacgggggcaagggaggtaaagggggtgttgttgtttgaa 754  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  40022395 taccctcctaaaccctcaatccaaacacaccctaagaagaatgaaggaggggttatgaaggacggaggcaagggaggtaaagggggtgttgttgtttgag 40022296  T
Q  755 gtaccagtggaagt 768  Q
    ||||||||||||||    
T  40022295 gtaccagtggaagt 40022282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 435 - 616
Target Start/End: Complemental strand, 23748342 - 23748166
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||||||||||| ||| ||||||||||||||         ||||    
T  23748342 ttaagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatg---tcttttaaaa 23748246  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||| |||||||  ||| ||| ||||| || |||||||||||||||||||||| |||||||||  ||||||||  ||||||||    
T  23748245 agttaacatat--taacatgataaacgataatataatacttcaatcacacttgatttatttttgaaaaacatgttatatagt 23748166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 606
Target Start/End: Original strand, 31795767 - 31795932
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||||  |||  |||| |||||||||||| |||||||||||| |         |||||    
T  31795767 taagagtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaag--tttttttaaaaa 31795864  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
     ||||   || | || ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  31795865 ataaa---ataacaacatgataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacat 31795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 435 - 625
Target Start/End: Original strand, 36347538 - 36347723
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    ||||||||||||||||||| |||||||| |||||||||||| | ||| ||| |  ||||||||||| ||||| || ||||||| ||          |||     
T  36347538 ttaagggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacat---attttttaaat 36347634  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||| |||||||||  | ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  36347635 agttaacatatta--acatgataaacaattatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 36347723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 435 - 516
Target Start/End: Complemental strand, 17380088 - 17380007
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatg 516  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||| ||||| | ||||||||||||||||| |||||||||    
T  17380088 ttaagggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 435 - 595
Target Start/End: Complemental strand, 9631807 - 9631652
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    |||||||||||||||||||||||||||| ||||| |||||||  ||||||| |  |||| |||||||||||| ||||| ||||||||         ||||    
T  9631807 ttaagggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatg---tcctttaaaa 9631711  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattt 595  Q
    ||| |||||||  ||| ||| ||||| || ||||||||||||| |||||||| ||||||||    
T  9631710 agttaacatat--taacatgataaacgataatataatacttcattcacacttgatttattt 9631652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 625
Target Start/End: Original strand, 39732764 - 39732910
Alignment:
Q  473 ggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaatcatataata 572  Q
    |||||||||||||||  |||||||||||||||||  ||| |||||||||         ||||||| |||||||||  | ||| ||||| |||||||||||    
T  39732764 ggaggggagggtttacttttcatttttaaattacgaacattatgaaatgttttat---aaaaagttaacatatta--acatgataaacgatcatataata 39732858  T
Q  573 cttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||| | ||||||    
T  39732859 cttcaatcatacttaatttattttagaaaaaca-tgtatatagtccgtaattt 39732910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 438 - 625
Target Start/End: Original strand, 19566820 - 19567003
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    |||||||||||||| |||| |||||  |||| ||| ||  ||||||||||  | ||| ||||||||||||||||||||||||||         |||||||    
T  19566820 agggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgttttttt--aaaaagt 19566917  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     | ||||||| |||  | |||||  || |||||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  19566918 tagcatattaaaat--gataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 19567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 549 - 625
Target Start/End: Complemental strand, 16565915 - 16565837
Alignment:
Q  549 aatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaaca--ttgtatatagttcataattt 625  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||  || |||||||||| ||||||    
T  16565915 aatatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatatagttcgtaattt 16565837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 436 - 519
Target Start/End: Complemental strand, 35736433 - 35736350
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaa 519  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| | |  |||| |||||||||| | ||||||||||||    
T  35736433 taagggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaa 35736350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 439 - 514
Target Start/End: Original strand, 36046205 - 36046280
Alignment:
Q  439 gggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacacta 514  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||  ||||||||||||||||| |||||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacacta 36046280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 591
Target Start/End: Complemental strand, 34209707 - 34209560
Alignment:
Q  439 gggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagta 538  Q
    ||||||||||||||| ||||||||  | |||| ||||||| || | |||  |||||||||||||||||| ||||||||||||          |||||||     
T  34209707 gggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaat---attttttaaaaagtt 34209611  T
Q  539 aacatattataatatgttaaacaatcatataatacttcaatcacacttaattt 591  Q
    |||||||  ||| ||| ||||||||||||||| ||||||||||||||||||||    
T  34209610 aacatat--taacatgataaacaatcatataacacttcaatcacacttaattt 34209560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 438 - 503
Target Start/End: Original strand, 35736175 - 35736240
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaat 503  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||| |||||||||    
T  35736175 agggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 434 - 521
Target Start/End: Original strand, 8426875 - 8426962
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||| ||||| |||| |||||| ||||| |||||||||||| |||||||||||  ||| ||||||||||||  ||||||||||||||    
T  8426875 attaatggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatg 8426962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 41778898 - 41778835
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||  || ||||||||    
T  41778898 atcatataatacttcaatcacacttaatttattttaaaaaaacattttatactgtccataattt 41778835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 7681378 - 7681332
Alignment:
Q  557 aaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7681378 aaacgatcatataatacttcaatcacacttaatttattttacaaaaa 7681332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 506
Target Start/End: Complemental strand, 15224940 - 15224870
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||  |||||||| ||||||||||||||||| ||||||  |||| ||||||||||||    
T  15224940 taagggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattac 15224870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 625
Target Start/End: Complemental strand, 2241541 - 2241472
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| |  |||||||| | ||||||    
T  2241541 taaacaatcatataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaattt 2241472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 511
Target Start/End: Complemental strand, 22356248 - 22356175
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||||| |  |||| |||||||||||| ||||    
T  22356248 agggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggaca 22356175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 476 - 615
Target Start/End: Original strand, 15224732 - 15224866
Alignment:
Q  476 ggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaatcatataatactt 575  Q
    |||||| |||||  ||||||||||||||||| ||||||||||||||         ||||||  |||||||||  | ||| ||||  ||||||||||||||    
T  15224732 ggggagtgtttacttttcatttttaaattacggacactatgaaatgtttttt---aaaaagctaacatatta--acatgataaatgatcatataatactt 15224826  T
Q  576 caatcacacttaatttattttacaaaaacattgtatatag 615  Q
    ||||||||||||||||||| || ||||||||  |||||||    
T  15224827 caatcacacttaatttattctagaaaaacatgttatatag 15224866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 17379846 - 17379894
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggttt 486  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  17379846 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttt 17379894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 36347785 - 36347717
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||| |||||  |||| ||||||||||||    
T  36347785 agggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattac 36347717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 464 - 625
Target Start/End: Original strand, 36566876 - 36567033
Alignment:
Q  464 gaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaat 563  Q
    |||||||||||| | |||| ||||  ||||||||||||||||| |||| |||||||           ||||||| |||||||||  | ||| ||||  ||    
T  36566876 gaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaa--gttttttataaaaagttaacatatta--acatgataaatgat 36566971  T
Q  564 catataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||||| |||||||||| || ||||||||  |||||| ||||||||||    
T  36566972 catataatacttcaatcacaattaatttattatagaaaaacatgttatataattcataattt 36567033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 443 - 510
Target Start/End: Complemental strand, 8427110 - 8427043
Alignment:
Q  443 gtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    |||||||||| ||||||||| ||||| |||||||||||| |||||  ||||||||||||| |||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagac 8427043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 602
Target Start/End: Complemental strand, 18811468 - 18811413
Alignment:
Q  547 ataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaa 602  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  18811468 ataacatgataaacaatcatataatatttcaatcacacttaatttattttaaaaaa 18811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 37740004 - 37740051
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  37740004 taaacgatcatataatacttcaatcacacttaatttattttagaaaaa 37740051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 17379943 - 17379897
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaa 602  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  17379943 taaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 35531898 - 35531832
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||| ||| |||| ||||||| |||||||||||||||| ||| ||||||||| ||||    
T  35531898 ggtgtgtttggatgaaggttttaggaggggaggggaggggagggtttagattccatttttaatttac 35531832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 506
Target Start/End: Complemental strand, 42813866 - 42813796
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||| || |||  |||| ||||||||||||    
T  42813866 taagggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattac 42813796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 603
Target Start/End: Complemental strand, 12751960 - 12751899
Alignment:
Q  542 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||| |||||||  ||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  12751960 atataataatataataaacgatcatataatacttcaatcacacttaaattattttagaaaaa 12751899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 16713487 - 16713560
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||| ||||||||| ||| |||||||||||||||||||||| ||||  ||| || ||| |||||||||||||    
T  16713487 tattaaaggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattac 16713560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 606
Target Start/End: Original strand, 8426990 - 8427034
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  8426990 atcatataatacttcaatcgcacttaatttattttagaaaaacat 8427034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 45257551 - 45257483
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||||| |||| || ||||||||||| || ||||||  |||| ||||||||||||    
T  45257551 agggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattac 45257483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 613
Target Start/End: Complemental strand, 887041 - 886990
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatat 613  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||| |||||    
T  887041 atcatataatacttcaatcacacataatttattttaaaaaagcattttatat 886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 436 - 487
Target Start/End: Original strand, 41778771 - 41778822
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggttta 487  Q
    ||||||||||||||||| |||||||||  |||| ||||||||||||||||||    
T  41778771 taagggtgtgtttggattgagggtttagaagggaaagggaggggagggttta 41778822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 521
Target Start/End: Complemental strand, 2241665 - 2241579
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||| |||||||||||| |||||||| | |||||| | ||||||| |||||  ||||||||||||||||  ||| ||||| ||||    
T  2241665 ttaaggatgtgtttggatgaagggtttaggtggggaaagaaggggagagtttatttttcatttttaaattatggacgctatggaatg 2241579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 9426987 - 9427053
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||| ||  ||||| |||||||||||||| |||||||| | |||| ||||||||||||    
T  9426987 ggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 482
Target Start/End: Complemental strand, 36046443 - 36046401
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggagg 36046401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 505
Target Start/End: Original strand, 39821686 - 39821736
Alignment:
Q  455 agggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  39821686 agggtttaagagggaaatggaggggagggtttacttttcatttttaaatta 39821736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 41841684 - 41841750
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||| |||| |||| ||||| |||||| |||||||||| | |||| ||||||||||||    
T  41841684 ggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 520
Target Start/End: Complemental strand, 7681488 - 7681406
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||| ||||||||| ||||||||||| ||||||||  ||||||||||||  ||| ||||||||||| | || | ||||||||    
T  7681488 taagggtttgtttggatcgagggtttaagcggggaagg--ggggagggtttactttttatttttaaattgcggatattatgaaat 7681406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 565 - 606
Target Start/End: Original strand, 29525855 - 29525896
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  29525855 atataatacttcaatcacatttaatttattttaaaaaaacat 29525896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 473 - 521
Target Start/End: Complemental strand, 1583286 - 1583238
Alignment:
Q  473 ggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||||||||    
T  1583286 ggaggggagggttcacttttcatttttaaattacggacactatgaaatg 1583238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 565 - 625
Target Start/End: Original strand, 2381109 - 2381169
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||||||||  ||||||||||||||||| ||||||||| || || |||| ||||||    
T  2381109 atataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaattt 2381169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 561 - 597
Target Start/End: Complemental strand, 20545835 - 20545799
Alignment:
Q  561 aatcatataatacttcaatcacacttaatttatttta 597  Q
    ||||||||||||||||||||||| |||||||||||||    
T  20545835 aatcatataatacttcaatcacatttaatttatttta 20545799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 444 - 511
Target Start/End: Complemental strand, 31061598 - 31061530
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcattttt-aaattacagaca 511  Q
    ||||||||| ||||||||| |||||||| |||||||||| ||||  |||| ||||| ||||||||||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggatttacttttctttttttaaattacagaca 31061530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 606
Target Start/End: Complemental strand, 35736300 - 35736256
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||    
T  35736300 atcatataatacttcagtcacacttcatttattttagaaaaacat 35736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 42296547 - 42296479
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||| ||||| ||| |||||||||||||| ||||||| |  |||  ||||||||||||    
T  42296547 agggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattac 42296479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 625
Target Start/End: Complemental strand, 45257445 - 45257369
Alignment:
Q  549 aatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||| ||||  |||||||||||||||||  |||||||||||||||||  |||||||| || || |||| ||||||    
T  45257445 aatatgataaatgatcatataatacttcaaaaacacttaatttattttaagaaaacattttacattgttcgtaattt 45257369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 9427230 - 9427147
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||| ||||||| | ||||| ||   | || ||||||| | ||||||||||||||||| |||||||| |||||    
T  9427230 agggtgtgtttggattgagggttcaggagggaaactaacggaagggtttgattttcatttttaaattacggacactataaaatg 9427147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 12541897 - 12541850
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||| |||||||| |||||||||| |||||||||||||||| |||||    
T  12541897 taaacgatcatatagtacttcaatcgcacttaatttattttagaaaaa 12541850  T

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Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 481
Target Start/End: Original strand, 15224153 - 15224188
Alignment:
Q  446 tttggatggagggtttaagaggggaagggaggggag 481  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15224153 tttggatggagggtttaggaggggaagggaggggag 15224188  T

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Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 625
Target Start/End: Original strand, 28262542 - 28262625
Alignment:
Q  542 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||| |||| ||| ||||| ||||| ||||| ||||||||||  |||||||||||| ||||||||  ||||||||  |||||||    
T  28262542 atataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttagaaaaacatgttatatagtcaataattt 28262625  T

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Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 34187572 - 34187643
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||| ||||| ||| |||||| |||||| |||| |  ||| |||||||||||||    
T  34187572 ttaagggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattac 34187643  T

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Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 520
Target Start/End: Complemental strand, 39821878 - 39821831
Alignment:
Q  473 ggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||||||||||||||  |||| |||||||||||| |||||||||||||    
T  39821878 ggaggggagggtttagttttcttttttaaattacggacactatgaaat 39821831  T

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Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 657 - 691
Target Start/End: Complemental strand, 17379876 - 17379842
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaaga 691  Q
    |||||||||||| ||||||||||||||||||||||    
T  17379876 ccctcctaaaccctcaatccaaacacaccctaaga 17379842  T

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Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 31928062 - 31928104
Alignment:
Q  445 gtttggatggagggtttaagaggggaagggaggggagggttta 487  Q
    |||||||||||||||||| |||||||||| ||||||| |||||    
T  31928062 gtttggatggagggtttatgaggggaaggaaggggagagttta 31928104  T

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Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 31928286 - 31928224
Alignment:
Q  445 gtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    |||||||| ||||||||| |||||||||||| ||||||| | |  ||| ||||||||||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattaca 31928224  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 617
Target Start/End: Original strand, 3094466 - 3094527
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagtt 617  Q
    |||| ||||||||||||||||||  ||||  ||||||||||| ||||||||| || ||||||    
T  3094466 taaataatcatataatacttcaaaaacacgaaatttattttagaaaaacattttacatagtt 3094527  T

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Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 606
Target Start/End: Original strand, 6721744 - 6721785
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||| ||||||||||||| |||||||||| ||||||||    
T  6721744 atataatatttcaatcacacttgatttattttagaaaaacat 6721785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 617
Target Start/End: Complemental strand, 9427116 - 9427055
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagtt 617  Q
    ||||||| ||||||||||||||||||| | ||||||| |||  ||||||||  |||||||||    
T  9427116 taaacaaacatataatacttcaatcacgcataatttagttttgaaaaacatgttatatagtt 9427055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 501
Target Start/End: Original strand, 17331413 - 17331478
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaa 501  Q
    |||||||||||||| |  ||||||| | |||||||| |||||||||||||||  |||| |||||||    
T  17331413 taagggtgtgtttgcaaagagggttaaggaggggaaaggaggggagggtttacttttcttttttaa 17331478  T

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Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 607
Target Start/End: Original strand, 21662328 - 21662372
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||    
T  21662328 atcatataatacttcaatcaaacttaattgatttta-aaaaacatt 21662372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 33265744 - 33265691
Alignment:
Q  549 aatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaa 602  Q
    |||||| ||||  |||||||||||||||||  ||||||||||||||||| ||||    
T  33265744 aatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaa 33265691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 694
Target Start/End: Original strand, 36347755 - 36347792
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaagaaga 694  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  36347755 ccctcctaaaccctcaatccaaacacaccctaataaga 36347792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 597
Target Start/End: Complemental strand, 41841813 - 41841772
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttatttta 597  Q
    |||| |||||||||||||| ||||||| ||||||||||||||    
T  41841813 taaaaaatcatataatactccaatcacccttaatttatttta 41841772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 607
Target Start/End: Complemental strand, 45098294 - 45098249
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||  ||||||||||||||||| ||| |||||    
T  45098294 atcatataatacttcaaaaacacttaatttattttaaaaatacatt 45098249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 5e-43; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 438 - 625
Target Start/End: Complemental strand, 54935313 - 54935130
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||         |||||||    
T  54935313 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatg---tattttaaaaagt 54935217  T
Q  538 aaacatattataatatgttaaacaatcatat-aatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     | |||||  ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||    
T  54935216 tatcatat--taatatgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaattt 54935130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 438 - 616
Target Start/End: Complemental strand, 54320678 - 54320505
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||| |         |||||||    
T  54320678 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacg---ttttttaaaaagt 54320582  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
     | |||||  ||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  54320581 tagcatat--taacatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgatatatagt 54320505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 436 - 605
Target Start/End: Complemental strand, 45742136 - 45741972
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    |||||||||||||||||| |||||||| | ||| |||||||||||| |||||  ||||||||||||||||| ||||||||||||||         |||||    
T  45742136 taagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatg---ttttttaaaaa 45742040  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaaca 605  Q
    || |||||||  ||| ||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  45742039 gttaacatat--taacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaaca 45741972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 37711367 - 37711285
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  37711367 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaat 37711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 438 - 616
Target Start/End: Original strand, 31348316 - 31348494
Alignment:
Q  438 agggtgtgtttggatggagggtttaa-----gaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaa 532  Q
    |||||||||||||||||||||||||      ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||         ||    
T  31348316 agggtgtgtttggatggagggtttagtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatg---ttttttaa 31348412  T
Q  533 aaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||  |||||||  ||| ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||  ||||||||    
T  31348413 aaagctaacatat--taacatgataaacaatcatataataattcaatcacacataatttattttagaaaaacatgttatatagt 31348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 440 - 625
Target Start/End: Complemental strand, 27735987 - 27735807
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaa 539  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||| |  ||||||||||||||||| |||||||| |||||         ||| ||| |    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatg---ttttttaaagagtta 27735891  T
Q  540 acatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||  ||| ||| ||||  |||||||||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  27735890 gcatat--taacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaattt 27735807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 625
Target Start/End: Complemental strand, 41174591 - 41174407
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||| |||  ||||||||||||||         |||||    
T  41174591 taagggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatg---gtttttaaaaa 41174495  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    || | |||||  ||| ||  ||||  |||||||||||| ||||||||| || |||||||||| ||||||||  |||||||| | ||||||    
T  41174494 gttagcatat--taacataataaatgatcatataatacatcaatcacatttgatttattttagaaaaacatgctatatagtccctaattt 41174407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 436 - 616
Target Start/End: Original strand, 49735466 - 49735641
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| |  ||||||||||||||||| ||||  ||||||||         |||||    
T  49735466 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatg---tcttttaaaaa 49735562  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    || ||| |||  ||| ||| ||||| || |||||||| ||| ||||||||| |||||||||| ||||||||  ||||||||    
T  49735563 gttaacctat--taacatgataaacgataatataatatttctatcacacttgatttattttagaaaaacatgttatatagt 49735641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 438 - 625
Target Start/End: Original strand, 5730830 - 5731012
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| ||| || ||||||||||| |||||||||||||||||| ||| |||| ||||           || |||    
T  5730830 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaat---attttttgaagagt 5730926  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||  ||| ||| ||||  |||||||||||||||||| ||||||||||||||||| | ||||||  |||||||| | ||||||    
T  5730927 taacatat--taacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaattt 5731012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 1968606 - 1968535
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| || |||||| |||||||||||||||||    
T  1968606 ttaagggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattac 1968535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 6938494 - 6938423
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||||| |  |||||||||||||||||    
T  6938494 ttaagggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattac 6938423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 556 - 625
Target Start/End: Complemental strand, 35248817 - 35248748
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  35248817 taaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 35248748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 532 - 616
Target Start/End: Complemental strand, 36151729 - 36151647
Alignment:
Q  532 aaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||| |||||||||  | ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  36151729 aaaagttaacatatta--acatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagt 36151647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 46007942 - 46007873
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||| |||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagac 46007873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 434 - 506
Target Start/End: Original strand, 54935063 - 54935136
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaaggga-ggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||  |||| ||||||||||||    
T  54935063 attaagggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattac 54935136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 442 - 506
Target Start/End: Original strand, 27735749 - 27735813
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||| ||||||||| |||||||||||| | |||||||||| |||||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattac 27735813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 7977744 - 7977673
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||||||| || |||  ||||||||||||    
T  7977744 ttaagggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattac 7977673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 503
Target Start/End: Complemental strand, 31348567 - 31348500
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaat 503  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||  |||| |||||||||    
T  31348567 taagggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 37761708 - 37761625
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||   |||| |||||||||||  |||| |||||||||    
T  37761708 agggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggacattatgaaatg 37761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 6891491 - 6891441
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  6891491 taaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 6891441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 446 - 595
Target Start/End: Original strand, 17938115 - 17938259
Alignment:
Q  446 tttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatat 545  Q
    ||||||||||||||||| |||||||| |||||| || |||||| |||| |||||||||||  |||| |||| ||||         ||||| | || |||     
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgtttttt---aaaaatttaaaata- 17938210  T
Q  546 tataatatgttaaacaatcatataatacttcaatcacacttaatttattt 595  Q
     |||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  17938211 -ataacatgataaacgatcatataatacttcaatcacacttaatttattt 17938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 47433821 - 47433871
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  47433821 taaacgatcatataatacttcaatcacacttaatttattttaaaaaaacat 47433871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 56135747 - 56135817
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| |  |||  ||||||||||||    
T  56135747 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattac 56135817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 599
Target Start/End: Original strand, 45132591 - 45132657
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttaca 599  Q
    ||||||| ||||||||| |||  | ||||| ||||||||||||||||||||||||||||||||||||||    
T  45132591 aaaaagttaacatattaaaat--gataaacgatcatataatacttcaatcacacttaatttattttaca 45132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 49735736 - 49735687
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggttta 487  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  49735736 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 434 - 479
Target Start/End: Original strand, 53260714 - 53260759
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggagggg 479  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  53260714 attaagggtgtgtttggatggagggtttaggaggggaagggagggg 53260759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 440 - 521
Target Start/End: Original strand, 54576329 - 54576410
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||  |||| |||||| ||||| |||| ||| |||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatg 54576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 438 - 510
Target Start/End: Original strand, 26166937 - 26167009
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||   |||| ||||||||||||||||    
T  26166937 agggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagac 26167009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 616
Target Start/End: Complemental strand, 26167068 - 26167008
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||| |||||||||||||||||||||||||||||||||||| | ||||||  ||||||||    
T  26167068 taaacgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagt 26167008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 438 - 510
Target Start/End: Complemental strand, 47433953 - 47433881
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||| | || |||||| ||||||||||||| ||||||||||  |||| ||||||||||||||||    
T  47433953 agggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagac 47433881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 37711268 - 37711205
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||||||||||||||||||||| | ||||||  |||||||| | ||||||    
T  37711268 atcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaattt 37711205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 43961535 - 43961472
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| || || |||||||||||    
T  43961535 atcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcataattt 43961472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 605
Target Start/End: Original strand, 46007820 - 46007863
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaaca 605  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  46007820 atcatataatacttcaatctcacttaatttattttacaaaaaca 46007863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 54320432 - 54320502
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||||| ||||| |||||| |||||||||| | |||| ||||||||||||    
T  54320432 ttaagggtgtgtttggattgagggtttaggagggaaaggga-gggagggtttgattttcttttttaaattac 54320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 607
Target Start/End: Complemental strand, 54494769 - 54494719
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  54494769 taaacaatcatataatacttcaatcacacttaacttatttta-aaaaacatt 54494719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 520
Target Start/End: Original strand, 1968351 - 1968433
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||||| ||||||||  ||||||| |||||| ||||||||||||||||||  ||||| | ||||||||  |||||||||||||    
T  1968351 agggtgcgtttggattaagggtttgagagggaaagggaggggagggtttacttttcaatattaaattatggacactatgaaat 1968433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 625
Target Start/End: Original strand, 1968450 - 1968541
Alignment:
Q  532 aaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||| |||||||||  | ||| ||||| ||||||||||||||||||||||| | |||||||||| ||||||||  |||||||| | ||||||    
T  1968450 aaaagttaacatatta--acatgataaacgatcatataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaattt 1968541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 24565344 - 24565414
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||||| |||||| || ||||||   ||||||||||||  |||||||||||||||||    
T  24565344 taagggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattac 24565414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 436 - 521
Target Start/End: Complemental strand, 5825142 - 5825057
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||||||| ||| ||||| | || |||| ||||  |||| ||||| ||||||||||| ||| |||||    
T  5825142 taagggtgtgtttggatggagggtttaggagaggaagtggggagaggatttacttttcttttttgaattacagacattataaaatg 5825057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 47846298 - 47846233
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||  |||  |||||||||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 562 - 607
Target Start/End: Complemental strand, 55510295 - 55510250
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||    
T  55510295 atcatataatacttcagtcacacttaatttattttaaaaaaacatt 55510250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 606
Target Start/End: Complemental strand, 16400954 - 16400881
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||| |||||||||  | ||| ||||| |||||||||||||||||||| | ||||||||||||| ||||||||    
T  16400954 aaaaagttaacatatta--acatgataaacgatcatataatacttcaatcataattaatttattttagaaaaacat 16400881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 521
Target Start/End: Original strand, 21694905 - 21694973
Alignment:
Q  453 ggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||| |||||||||||| ||||||| |||  |||| |||||||||||| |||||||| |||||    
T  21694905 ggagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatg 21694973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 483
Target Start/End: Original strand, 37711135 - 37711183
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  37711135 ttaagggtgtgtttggattgagggtttaggaggggaagggaagggaggg 37711183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 44784123 - 44784075
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaac 604  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  44784123 taaacgatcatataatacttcaatcacacttaatttactttagaaaaac 44784075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 21695136 - 21695065
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||||| | ||||||| |||||||||| || ||||||||||  ||||  ||||||||||    
T  21695136 attaagggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaatta 21695065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 513
Target Start/End: Complemental strand, 35248922 - 35248855
Alignment:
Q  446 tttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacact 513  Q
    ||||||||||||||||| ||| || |||||||||||||||||  ||||| ||||||||||  ||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacact 35248855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 56135874 - 56135811
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| || || |||| ||||||    
T  56135874 atcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaattt 56135811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 509
Target Start/End: Complemental strand, 2248048 - 2247974
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacaga 509  Q
    |||| ||||||||||||| ||||||||| |||| |||| || ||||| |||||  |||| |||||||||||||||    
T  2248048 ttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga 2247974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 5731080 - 5731027
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggttt 486  Q
    ||||||| ||||||||| || ||||||||| |||||||||||||||||| ||||    
T  5731080 tattaagagtgtgtttgaattgagggtttaggaggggaagggaggggagagttt 5731027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 521
Target Start/End: Original strand, 47694344 - 47694433
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggttta-aatttcatttttaaattacagacactatgaaatg 521  Q
    |||| ||||| |||||||||||||| |||  ||| |||||||||||||||| |||   ||||  ||||||||||| ||||||||||||||    
T  47694344 tatttagggtatgtttggatggaggattttggagcggaagggaggggagggcttactttttctcttttaaattacggacactatgaaatg 47694433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 616
Target Start/End: Original strand, 2917076 - 2917136
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||| |||||||||||||||||||||| | ||||||||||| |||| |||  ||||||||    
T  2917076 taaacgatcatataatacttcaatcacaataaatttattttagaaaatcatgttatatagt 2917136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 594
Target Start/End: Original strand, 21695008 - 21695040
Alignment:
Q  562 atcatataatacttcaatcacacttaatttatt 594  Q
    |||||||||||||||||||||||||||||||||    
T  21695008 atcatataatacttcaatcacacttaatttatt 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 606
Target Start/End: Complemental strand, 22921122 - 22921062
Alignment:
Q  547 ataatatgttaaacaatcatataatacttcaatcacac-ttaatttattttacaaaaacat 606  Q
    |||||||| ||||| ||||||||||||||||||||||| || ||||||| || ||||||||    
T  22921122 ataatatgataaacgatcatataatacttcaatcacactttgatttattctagaaaaacat 22921062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 606
Target Start/End: Original strand, 22970677 - 22970737
Alignment:
Q  547 ataatatgttaaacaatcatataatacttcaatcacac-ttaatttattttacaaaaacat 606  Q
    |||||||| ||||| ||||||||||||||||||||||| || ||||||| || ||||||||    
T  22970677 ataatatgataaacgatcatataatacttcaatcacactttgatttattctagaaaaacat 22970737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 28332935 - 28332887
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaac 604  Q
    ||||| |||||||||||||||||||| |||||||||| |||| ||||||    
T  28332935 taaacgatcatataatacttcaatcatacttaatttactttagaaaaac 28332887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Original strand, 18516590 - 18516653
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||| ||||| |||||||||||||||||| |||||  ||||||||| ||||  |||||||||||    
T  18516590 atcacataatgcttcaatcacacttaattcattttttaaaaacattttatagtgttcataattt 18516653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 29798285 - 29798360
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    |||||||||||||||||| || |||||| ||||||||| ||| |||  |||||  |||  ||||||||||||||||    
T  29798285 ttaagggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagac 29798360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 607
Target Start/End: Complemental strand, 34995182 - 34995131
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||| |||| |||||||||||||  ||||||||||||||||| |||||||||    
T  34995182 taaataatcttataatacttcaaaaacacttaatttattttagaaaaacatt 34995131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 47846168 - 47846215
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||| ||||||||||||||||||  ||||||||||||||||| |||||    
T  47846168 taaataatcatataatacttcaaaaacacttaatttattttaaaaaaa 47846215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 696
Target Start/End: Original strand, 54935283 - 54935322
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaagaagaat 696  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  54935283 ccctcctaaaccctccatccaaacacaccctaagaagaat 54935322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 606
Target Start/End: Original strand, 2247908 - 2247965
Alignment:
Q  548 taatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||| |||||||| |||||||||||||||||||| | |||| ||||| ||||||||    
T  2247908 taatatgataaacaattatataatacttcaatcacacat-attttttttagaaaaacat 2247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 17182591 - 17182645
Alignment:
Q  549 aatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||| ||||  |||||||||||||||||  ||||||||||||||||| |||||    
T  17182591 aatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaa 17182645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 22186714 - 22186788
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    |||| ||||||| ||||||| ||||||||| || |||||||||||| || ||| |  ||| ||||||||||||||    
T  22186714 tatttagggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattaca 22186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 51329794 - 51329864
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||| ||| ||||| |||||||||  || |||| ||| || ||| |||||||||||||    
T  51329794 taagggtgtgtttggattgagagtttaggaggggaagaaagaggagagttcaattttaatttttaaattac 51329864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 595
Target Start/End: Original strand, 23332653 - 23332686
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattt 595  Q
    ||||||||||||||| ||||||||||||||||||    
T  23332653 atcatataatacttctatcacacttaatttattt 23332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 591
Target Start/End: Complemental strand, 41227605 - 41227576
Alignment:
Q  562 atcatataatacttcaatcacacttaattt 591  Q
    ||||||||||||||||||||||||||||||    
T  41227605 atcatataatacttcaatcacacttaattt 41227576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 690
Target Start/End: Original strand, 47433923 - 47433956
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaag 690  Q
    ||||||||||||||||| ||||||||||||||||    
T  47433923 ccctcctaaaccgtcaacccaaacacaccctaag 47433956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 47846505 - 47846440
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||| |||||||||||||| |||||||  ||| ||||||  |||  |||||||||||    
T  47846505 ggtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaatta 47846440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 520
Target Start/End: Complemental strand, 55510415 - 55510331
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||| |||||||||||||| ||||||||||| |||  | | |||||||| | ||| |||||||||||||  ||||||| ||||    
T  55510415 ttaagggcgtgtttggatggagagtttaagagggaaagaaatgtgagggttt-acttttatttttaaattacgaacactataaaat 55510331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 2e-39; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 435 - 625
Target Start/End: Original strand, 31543069 - 31543254
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |||||||||||         ||||    
T  31543069 ttaagggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatg---tttttaaaaa 31543165  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||| |||||||  ||| ||  |||||  ||||||||||||||||||||||||||||||||||| ||||||||  ||||| || ||||||||    
T  31543166 agttaacatat--taacatcataaacggtcatataatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataattt 31543254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 441 - 625
Target Start/End: Complemental strand, 16653190 - 16653011
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaa 540  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||         ||||||| ||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatg---tttttgaaaaagttaa 16653094  T
Q  541 catattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||  ||| |   ||||| ||||||||||||||||||||||||| |||||||||| ||||||||  |||||||| | ||||||    
T  16653093 catat--taacaaaataaacgatcatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaattt 16653011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 438 - 625
Target Start/End: Complemental strand, 11785770 - 11785588
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| ||| || |||||||||| | ||||||||||||||||| |||| ||||||||          |||||||    
T  11785770 agggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaat---attttttaaaaagt 11785674  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     | |||||  ||| ||| ||||||| ||||||||||||||||| || ||||| ||||||| ||||||||  |||||||||||||||||    
T  11785673 tagcatat--taacatgataaacaaacatataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataattt 11785588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 31738667 - 31738585
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||    
T  31738667 agggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaat 31738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 444 - 603
Target Start/End: Complemental strand, 36309081 - 36308927
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacat 543  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||| ||||||||||  ||| | ||||||           ||||||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaat---atatttttaaaagtaaacat 36308985  T
Q  544 attataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||  ||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  36308984 at--taacatgataaacaatcatataatacttcaatcacacttagtttattttataaaaa 36308927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 615
Target Start/End: Original strand, 41103502 - 41103678
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcattttt--aaattacagacactatgaaatgnnnnnnnnnaaa 533  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| | |||| |||||  ||||||  |||||||||||| |         |||    
T  41103502 taagggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacg--tttttaaaaa 41103599  T
Q  534 aagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatag 615  Q
    || ||||   |  |||| ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  41103600 aattaaa---acaataacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatag 41103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 436 - 625
Target Start/End: Original strand, 40990179 - 40990366
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttca-tttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    ||||||||||||||||||||||||||  |||  ||| ||||||||||||||| |||||| ||||||| ||| |||||||||||||||         |||     
T  40990179 taagggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatg-ttttttttaaag 40990277  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||| |||||||  ||| ||| ||| | |||||||||||||||||||| ||||||||||||||| | ||||||  |||||||| | ||||||    
T  40990278 agttaacatat--taacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaattt 40990366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 43732931 - 43732848
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||| |||||||||||| |||| ||| |||||    
T  43732931 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 43732848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 606
Target Start/End: Original strand, 30479721 - 30479880
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaac 541  Q
    |||||||||||||||| |||| |||||| | ||||||||| ||| |  ||||||||||||||||||||||||||||||||         ||||||| |||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatg---tcttttaaaaagttaac 30479817  T
Q  542 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||  |||  || ||||  || |||||||||||||||||||||| |||||||||| ||||||||    
T  30479818 atat--taaggtgataaatgataatataatacttcaatcacacttgatttattttagaaaaacat 30479880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 435 - 625
Target Start/End: Original strand, 9718486 - 9718661
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    ||||||||||||||||||||||||||||          |||||||||||||  | ||||||||||||||||| ||||||||||||||         ||||    
T  9718486 ttaagggtgtgtttggatggagggttta----------ggaggggagggttcgattttcatttttaaattacggacactatgaaatggttttt---aaaa 9718572  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||| | |||||||  | ||| |||||||||||||||||||||||||||| |||||  |||||| ||||| ||  |||||||||||||||||    
T  9718573 agttagcatatta--acatgataaacaatcatataatacttcaatcacaattaatgaattttagaaaaatatgttatatagttcataattt 9718661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 433 - 520
Target Start/End: Complemental strand, 34634392 - 34634305
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||||||||||||||||||||||| ||||| |||||||||||| | ||||||| |  ||| ||||||||||||| |||||||||||||    
T  34634392 tattaagggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaat 34634305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 446 - 606
Target Start/End: Original strand, 11575415 - 11575569
Alignment:
Q  446 tttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatat 545  Q
    |||||||||||| |||| ||| ||||||||||| ||||||||  ||||||| ||||||||  || |||||||||||         ||||||| |||||||    
T  11575415 tttggatggaggatttaggagaggaagggaggg-agggtttacttttcattcttaaattaaggatactatgaaatgtttttt---aaaaagttaacatat 11575510  T
Q  546 tataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||  | ||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||||    
T  11575511 ta--acatgataaacgatcatataatactttaatcacacttaatttattttagaaaaacat 11575569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 438 - 521
Target Start/End: Original strand, 3726863 - 3726946
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||||| ||||||||||||  ||| ||||||  ||||||||||||||||| ||||| ||| ||||    
T  3726863 agggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatg 3726946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 531 - 625
Target Start/End: Original strand, 7503044 - 7503136
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||| |||||||||  | ||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||| | ||||||||    
T  7503044 aaaaagttaacatatta--acatgataaacaatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatccataattt 7503136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 625
Target Start/End: Original strand, 1026884 - 1027030
Alignment:
Q  473 ggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaatcatataata 572  Q
    |||||||||||||||  ||||||||||||||| | |||||||||||||           |||||| |||||||||  | ||| ||||| |||||||||||    
T  1026884 ggaggggagggtttacttttcatttttaaattgcggacactatgaaatattttatc---aaaagttaacatatta--acatgataaacgatcatataata 1026978  T
Q  573 cttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| | ||||||    
T  1026979 cttcaatcatacttaatttattttagaaaaacatt-tatatagtccgtaattt 1027030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 435 - 521
Target Start/End: Complemental strand, 30365377 - 30365291
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||| ||||  |||| |||||||||||||| ||   |||| ||||||||||||||||| |||||||||    
T  30365377 ttaagggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattacagacattatgaaatg 30365291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 42650449 - 42650499
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42650449 taaacaatcatataatacttcaatcacacttaatttattttagaaaaacat 42650499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 453 - 520
Target Start/End: Complemental strand, 1281372 - 1281305
Alignment:
Q  453 ggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||||||||||||  ||||||||||||||| ||||  ||||||||||||||||| |||||||||||||    
T  1281372 ggagggtttaagataggaagggaggggaggatttagttttcatttttaaattacggacactatgaaat 1281305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 8815388 - 8815317
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||| |  ||| |||||||||||||    
T  8815388 ttaagggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattac 8815317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 31543316 - 31543249
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  31543316 agggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 37032533 - 37032450
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||| |||||||||  | ||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||    
T  37032533 aaaaagttaacatatta--agatgataaactatcatataatactttaatcacacttaatttattttaaaaaaacatgttatatagt 37032450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 521
Target Start/End: Complemental strand, 16024399 - 16024315
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||| |||||  |||| |||||||||||| |||| ||| |||||    
T  16024399 taagagtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacggacattataaaatg 16024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 616
Target Start/End: Complemental strand, 6315193 - 6315133
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||| ||| |||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  6315193 taaacgatcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagt 6315133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 34196551 - 34196470
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||| |||  |||| ||||||||||||||||| ||| |||||    
T  34196551 agggtgcgtttggatggagggtttaggaggggaaggg-ggggagggcttacttttc-tttttaaattacagacattataaaatg 34196470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 520
Target Start/End: Complemental strand, 10028363 - 10028285
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||||||  ||||||||| ||| ||||| ||||||||||||||  ||| | ||||||||||| |||||||||||||    
T  10028363 tgtgtttggacagagggtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaat 10028285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 28083873 - 28083823
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  28083873 taaacaatcatataatactccaatcacacttaatttattttagagaaacat 28083823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 442 - 507
Target Start/End: Complemental strand, 11575646 - 11575581
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    |||||||||||  |||||||| || | |||||||||||||||||||  ||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattaca 11575581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 12022142 - 12022211
Alignment:
Q  438 agggtgtgtttggatggagggtttaaga-ggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||| |||  |||| ||||||||||||    
T  12022142 agggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattac 12022211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 2248452 - 2248520
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||| ||| || || | ||||||||||||    
T  2248452 agggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattac 2248520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 606
Target Start/End: Complemental strand, 30664515 - 30664442
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||| |||||||||  ||||| |||||  | ||||||||||||||||||||||||||||||||  ||||||||    
T  30664515 aaaaagttaacatatta--atatgataaacggttatataatacttcaatcacacttaatttatttttgaaaaacat 30664442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 7503198 - 7503131
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||| |||| |||  ||||||| ||||||||||||||||  |||| |||||||||||    
T  7503198 agggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaatta 7503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 521
Target Start/End: Original strand, 8815141 - 8815224
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||||| ||||||||| |||| || |  |||  |||| |||||||||||| |||| ||| |||||    
T  8815141 agggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggacattataaaatg 8815224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 9718723 - 9718656
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||  |||||  |||| |||||||||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 10028249 - 10028194
Alignment:
Q  548 taatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||||| ||||| ||||||||| ||||||| |||||||||||||||||| |||||    
T  10028249 taatatggtaaacgatcatataagacttcaaccacacttaatttattttaaaaaaa 10028194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 436 - 483
Target Start/End: Complemental strand, 12022389 - 12022342
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  12022389 taagggtgtgtttggattgagggtttaggaggggaaaggaggggaggg 12022342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 506
Target Start/End: Complemental strand, 1027094 - 1027024
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||  |||||||| || |||||||||||| |||||| |  |||| ||||||||||||    
T  1027094 taagggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattac 1027024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 444 - 506
Target Start/End: Original strand, 1281149 - 1281211
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||| ||||||||| |||||||||||| | |||||||||  |||| ||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattac 1281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 4247630 - 4247680
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| ||||||||    
T  4247630 taaacgatcatataatacttaaatcatacttaatttattttaaaaaaacat 4247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 510
Target Start/End: Complemental strand, 30479959 - 30479889
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||| ||||||||| ||| |||| |||| ||||||||||  |||| |||||||| |||||||    
T  30479959 ggtgtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagac 30479889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 33922674 - 33922591
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||| |||||||||| ||  | ||||||||||||| |||||||||||| ||| ||||||||||| ||||| ||  ||||||||    
T  33922674 aaaaagttaacatattatcat--gataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagt 33922591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 43732677 - 43732723
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  43732677 taagggtgtgtttggattgagggtttaggaggggaagggagaggagg 43732723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 506
Target Start/End: Complemental strand, 7394706 - 7394637
Alignment:
Q  437 aagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||| |||| |  |||  ||||||||||||    
T  7394706 aaggatgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattac 7394637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 625
Target Start/End: Complemental strand, 7979271 - 7979202
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||| |||||||||||||||||||  ||||| |||||||||| ||||||||  |||||||| | ||||||    
T  7979271 taaataatcatataatacttcaattgcacttgatttattttagaaaaacatgttatatagtccgtaattt 7979202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 607
Target Start/End: Original strand, 12022262 - 12022307
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||    
T  12022262 atcatataatacttcaaaaacacttaatttattttaaaaaaacatt 12022307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 521
Target Start/End: Original strand, 24243048 - 24243131
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||| |  |||  ||||||||| ||||||| |||||||| |||||    
T  24243048 taagggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattac-gacactataaaatg 24243131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 603
Target Start/End: Original strand, 35694874 - 35694915
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  35694874 atcatataatacttcaatcacacttgatttattttaaaaaaa 35694915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 483
Target Start/End: Original strand, 40632996 - 40633041
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||    
T  40632996 agggtgtgtttgaatggagggtttaggaggggaagggagaggaggg 40633041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 2248666 - 2248614
Alignment:
Q  468 ggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||||||||||||||||| |  ||| ||||||||||||| |||||||||||||    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaat 2248614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 478
Target Start/End: Complemental strand, 2482017 - 2481977
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggg 478  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  2482017 agggtatgtttggatggagggtttaggaggggaagggaggg 2481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 616
Target Start/End: Complemental strand, 11033548 - 11033488
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||| ||||||||||  ||||||||||| |||||||||||| ||||||||  ||||||||    
T  11033548 taaacgatcatataattattcaatcacacataatttattttagaaaaacatgatatatagt 11033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 441 - 517
Target Start/End: Complemental strand, 24243287 - 24243212
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatga 517  Q
    |||||||||||| ||||||||||| |||||| ||||||||||| |||  || | ||| ||||||||||||| |||||    
T  24243287 gtgtgtttggatcgagggtttaag-ggggaatggaggggagggcttactttccttttctaaattacagacaatatga 24243212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 30365130 - 30365198
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||| ||||||||| |||| ||| ||||||||| ||| |  ||| |||||||||||||    
T  30365130 agggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattac 30365198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 565 - 605
Target Start/End: Complemental strand, 34633859 - 34633819
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaaca 605  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  34633859 atataatacttcaatcacacttgatttattttagaaaaaca 34633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 602
Target Start/End: Original strand, 38198168 - 38198208
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaa 602  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  38198168 atcatataatacttcaatcacacttaattcattttaaaaaa 38198208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 511
Target Start/End: Original strand, 28083744 - 28083815
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    |||||||| |||| ||||||||| |||||||||||||| |||  |||   |||| |||||||||||||||||    
T  28083744 ggtgtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagaca 28083815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 29358452 - 29358499
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||| ||| ||||||||||||||||||||||||||||| || |||||    
T  29358452 taaacgatcctataatacttcaatcacacttaatttattctagaaaaa 29358499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 597
Target Start/End: Original strand, 30581929 - 30581964
Alignment:
Q  562 atcatataatacttcaatcacacttaatttatttta 597  Q
    |||||||||||||||||||||||||||||| |||||    
T  30581929 atcatataatacttcaatcacacttaatttgtttta 30581964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 612
Target Start/End: Complemental strand, 27487115 - 27487065
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtata 612  Q
    |||||||||||||||||| ||||||||||  ||||| ||||||||| ||||    
T  27487115 atcatataatacttcaataacacttaattggttttagaaaaacattttata 27487065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 31738548 - 31738494
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||||||||||||||| |||||||||||||| || | ||||||  ||||||||    
T  31738548 atcatataatacttcaattacacttaatttattctagagaaacatgttatatagt 31738494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 616
Target Start/End: Original strand, 37923197 - 37923251
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||||||| || |||| |||||||||||||||| ||||||||  ||||||||    
T  37923197 atcatataatattttaatcgcacttaatttattttagaaaaacatgttatatagt 37923251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 37923320 - 37923250
Alignment:
Q  441 gtgtgtttggatggagggtttaagag-gggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||  |||||||| ||| ||||||||| || |||||||||  || |||||||||||||||||    
T  37923320 gtgtgtttggattaagggtttaggagagggaagggatggaagggtttaatatttatttttaaattacagac 37923250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 478
Target Start/End: Original strand, 2412967 - 2413004
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggg 478  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  2412967 gtgtgtttggatggagggtttaggaggggaggggaggg 2413004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 3726975 - 3727028
Alignment:
Q  563 tcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||  ||||||||    
T  3726975 tcatataatatttcaatcatgcttaatttattttagaaaaacatgttatatagt 3727028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 481
Target Start/End: Original strand, 16024155 - 16024196
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggag 481  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  16024155 ggtgtgtttggattgagggtttaggaagggaagggaggggag 16024196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 595
Target Start/End: Original strand, 24243166 - 24243199
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattt 595  Q
    ||||||||||||||||||||||||||||| ||||    
T  24243166 atcatataatacttcaatcacacttaattaattt 24243199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 607
Target Start/End: Complemental strand, 27483685 - 27483640
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||| |||||| |||||||| | |||||||||    
T  27483685 atcatataatacttcaataacactttatttatttaaaaaaaacatt 27483640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 602
Target Start/End: Original strand, 42919831 - 42919888
Alignment:
Q  545 ttataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaa 602  Q
    |||||||||| |||| ||||||| ||||||||||| | | ||||||||||||| ||||    
T  42919831 ttataatatgataaataatcataaaatacttcaattatatttaatttattttaaaaaa 42919888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 2e-36; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 436 - 597
Target Start/End: Original strand, 4833529 - 4833685
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||         |||||    
T  4833529 taagggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatg---ttttataaaaa 4833625  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttatttta 597  Q
    || ||| |||  ||| ||| |||||||||||||||||||| ||||||| |||||||||||||    
T  4833626 gttaacctat--taacatgataaacaatcatataatacttaaatcacatttaatttatttta 4833685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 434 - 625
Target Start/End: Complemental strand, 47391104 - 47390917
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaa 533  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||| |||||||| |||           |||    
T  47391104 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaa---cattttttaaa 47391008  T
Q  534 aagtaaacatattataatatgttaaacaa-tcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    | || |||||||  ||| ||| ||||||| ||||||||||||||||||||| ||||| ||||||| ||||||||  |||||||||||||||||    
T  47391007 atgttaacatat--taacatgataaacaagtcatataatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataattt 47390917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 438 - 606
Target Start/End: Original strand, 40196532 - 40196695
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||| |||||| |||||||| |||||         |||||||    
T  40196532 agggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatg---ttttataaaaagt 40196628  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
     |||||||   ||  || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40196629 taacatat--caacctgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacat 40196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 441 - 603
Target Start/End: Original strand, 34235010 - 34235167
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaa 540  Q
    ||||||||||||||||||||| ||  |||| | ||||||||  ||||  ||||||||||||||||| ||||||||||||||         ||||||| ||    
T  34235010 gtgtgtttggatggagggtttgagtagggacgagaggggagaatttacttttcatttttaaattacggacactatgaaatgttttat---aaaaagttaa 34235106  T
Q  541 catattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  34235107 catatta--atatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaa 34235167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 616
Target Start/End: Complemental strand, 25887438 - 25887263
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||||||||||||| || |||||||| |||||||||||||||||| ||||| ||||||||||||||||||  | |  ||||||||          ||||    
T  25887438 taagggtgtgtttgg-tgaagggtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgtttttttt--aaaa 25887342  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    || |||||||||  ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  25887341 gttaacatatta--atatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgttatatagt 25887263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 521
Target Start/End: Complemental strand, 18231832 - 18231747
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||    
T  18231832 taagggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatg 18231747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 438 - 625
Target Start/End: Original strand, 41496957 - 41497139
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||  ||| ||||||||||||| |||| || ||||||         ||||| |    
T  41496957 agggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatg---ttttttaaaaatt 41497053  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||  ||| ||| ||||  |||||||||| ||||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  41497054 taacatat--taacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 41497139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 625
Target Start/End: Original strand, 1051517 - 1051680
Alignment:
Q  455 agggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatg 554  Q
    |||||||| ||||||||  |||||||||||| | |||||||||||||||||| ||||| ||||||||         ||||||| ||||||||| |   ||    
T  1051517 agggtttaggaggggaatagaggggagggttaacatttcatttttaaattacggacac-atgaaatgtttttt---aaaaagttaacatattaca---tg 1051609  T
Q  555 ttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||   |||||||||| ||||||    
T  1051610 ataaacaatcatataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaattt 1051680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 433 - 625
Target Start/End: Original strand, 13770943 - 13771128
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaa 532  Q
    |||| ||||||||||||||| |||| |||| ||||||||||||||||||| ||||  | | ||||||||||||| |||||||| ||||          ||    
T  13770943 tatttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaat-----attataa 13771037  T
Q  533 aaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||| |||||||  ||| ||| |||||||| |||||| |||  ||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  13771038 aaagttaacatat--taacatgataaacaatgatataacactcgaatcacacttaatttattttaaaaaaacatgttatatagtccgtaattt 13771128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 478 - 625
Target Start/End: Original strand, 33655148 - 33655290
Alignment:
Q  478 ggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaatcatataatacttca 577  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||         ||||||| |||||||||  | ||| ||||  ||||||||||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggacactatgaaatgtttttt---aaaaagttaacatatta--acatgataaatgatcatataatacttca 33655242  T
Q  578 atcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||||| ||||||||  |||||||  ||||||||    
T  33655243 atcacacttaatttattttagaaaaacatgttatatagcccataattt 33655290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 531 - 618
Target Start/End: Original strand, 34228408 - 34228493
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttc 618  Q
    ||||||| |||||||||  ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||    
T  34228408 aaaaagttaacatatta--atatgataagcaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttc 34228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 441 - 521
Target Start/End: Complemental strand, 42306571 - 42306491
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||| ||||||||| ||||||||  ||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatg 42306491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 435 - 596
Target Start/End: Original strand, 13425117 - 13425273
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    |||||||||||||||||| ||||||||| |||||||||| || ||| ||||||  ||| |||||||||||||||||||||  ||||           |||    
T  13425117 ttaagggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaat---attttttcaaa 13425213  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttatttt 596  Q
    ||| |||||||  ||| ||| ||||||||||||| |||||||| ||||||||||||||||||    
T  13425214 agtcaacatat--taacatgataaacaatcatattatacttcattcacacttaatttatttt 13425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 33519292 - 33519209
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||  |||| | ||||||||||||||| ||| |||||    
T  33519292 agggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatg 33519209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 39856112 - 39856041
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  39856112 ttaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattac 39856041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 36267553 - 36267621
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||  |||| ||||||||||||    
T  36267553 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattac 36267621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 435 - 521
Target Start/End: Original strand, 30592250 - 30592336
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||| |||||||||||| |||| ||||| |||||| ||||||| |||  |||| ||||||||||||||||||||| |||||    
T  30592250 ttaagggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatg 30592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 438 - 520
Target Start/End: Original strand, 48881558 - 48881640
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||  |||| |||||||||||| |||| ||| ||||    
T  48881558 agggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaat 48881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 556 - 625
Target Start/End: Original strand, 24970278 - 24970347
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||| | ||||||||    
T  24970278 taaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataattt 24970347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 22163222 - 22163278
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtata 612  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22163222 taaacgatcatataatacttcaatcacacttaatttattttagaaaaacattatata 22163278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 22221930 - 22221986
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtata 612  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22221930 taaacgatcatataatacttcaatcacacttaatttattttagaaaaacattatata 22221986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 506
Target Start/End: Complemental strand, 1051744 - 1051674
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||| ||||  |||| ||||||||||||    
T  1051744 taagggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattac 1051674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 435 - 521
Target Start/End: Complemental strand, 10315880 - 10315794
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||| ||||||||||||| |||||| ||||||||||||| ||  | ||||  ||||||||||||| ||| ||||||||||||||    
T  10315880 ttaagggcgtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatg 10315794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 37925839 - 37925909
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| |  |||  ||||||||||||    
T  37925839 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattac 37925909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 13771193 - 13771122
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||| ||| ||||||||| |||||||||||||| ||| |||||  |||| ||||||||||||    
T  13771193 ttaagggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattac 13771122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 506
Target Start/End: Complemental strand, 31571713 - 31571646
Alignment:
Q  439 gggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| |||||  |||| ||||||||||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattac 31571646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 47390855 - 47390922
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||| ||||| ||| ||||||||||||| ||||||||||  |||| |||||||||||    
T  47390855 agggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 17853002 - 17852952
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  17853002 taaacgatcatataatacctcaatcacacttaatttattttagaaaaacat 17852952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 504
Target Start/End: Original strand, 40282197 - 40282263
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatt 504  Q
    ||||| ||||||||| ||||||||| ||||||||||||| ||||||||| | |||| ||||||||||    
T  40282197 agggtatgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 562 - 603
Target Start/End: Original strand, 18063680 - 18063721
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  18063680 atcatataatacttcaatcacacttaatttattttaaaaaaa 18063721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 438 - 483
Target Start/End: Complemental strand, 36267797 - 36267752
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 36267752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 444 - 505
Target Start/End: Complemental strand, 37621012 - 37620951
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||||||||| ||| ||||||||||||||||||||   |||| |||||||||||    
T  37621012 tgtttggatggagggtttgagaagggaagggaggggagggtttgcttttcttttttaaatta 37620951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 440 - 521
Target Start/End: Original strand, 45940658 - 45940739
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||| ||||||  |||||||||||||| |  |||||  ||| ||||||| ||||| ||||||||||||||    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatg 45940739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 482
Target Start/End: Original strand, 25887192 - 25887236
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  25887192 agggtgtgtttggattgagggtttatgaggggaagggaggggagg 25887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 617
Target Start/End: Complemental strand, 26365898 - 26365838
Alignment:
Q  557 aaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagtt 617  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||| ||  |||||||||    
T  26365898 aaacaatcatataatacttcaatcacacctagtttattttagaaaaatatgttatatagtt 26365838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||| ||||||||| ||||||||| |||| |||||||||  |||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 33519046 - 33519093
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  33519046 taagggagtgtttggatggaggttttaggaggggaagggaggggaggg 33519093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 33519173 - 33519110
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||  ||||||||||||||| | ||||||||| ||||| |||| ||||||    
T  33519173 atcatataatacttcaaaaacacttaatttatttcaaaaaaacattttatattgttcgtaattt 33519110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 625
Target Start/End: Original strand, 39855984 - 39856047
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  39855984 atcatataatacttaagtcacacttaatttattttagaaaaacatgttatatagtccgtaattt 39856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 434 - 513
Target Start/End: Complemental strand, 43230483 - 43230404
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacact 513  Q
    |||||| ||||||||||||| |||||||| ||| |||| | ||||||| |||||  ||| ||||||||||||| ||||||    
T  43230483 attaagtgtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact 43230404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 48015454 - 48015379
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    |||||||| ||||||||||||||| ||| |||||||||||||  ||| | |||  |||| ||||||||||||||||    
T  48015454 ttaagggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagac 48015379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 595
Target Start/End: Complemental strand, 20393726 - 20393693
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattt 595  Q
    ||||||||||||||||||||||||||||||||||    
T  20393726 atcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 481
Target Start/End: Original strand, 28074101 - 28074146
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggag 481  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||    
T  28074101 taagggtgtgtttggattgaaggtttaggaggggaagggaggggag 28074146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 603
Target Start/End: Complemental strand, 41008334 - 41008267
Alignment:
Q  532 aaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||| |||||||||  | ||| |||||||||||||||  ||||||||||||||||||||||||| |||||    
T  41008334 aaaagttaacatatta--acatgataaacaatcatataa--cttcaatcacacttaatttattttaaaaaaa 41008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 506
Target Start/End: Original strand, 43230239 - 43230304
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||| | ||||||||||| | |||| |||||||||||||  |||| ||||||||||||    
T  43230239 gtgtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattac 43230304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 510
Target Start/End: Complemental strand, 16833942 - 16833870
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    |||||||||||||||| ||| ||||||||||||||| ||| ||||  |||  |||| |||| |||||||||||    
T  16833942 agggtgtgtttggatgcaggatttaagaggggaaggaaggagaggagttacttttctttttaaaattacagac 16833870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 26366009 - 26365945
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||| ||||||||||||| |||||| |||||||  |||| | |||| |||||||||||    
T  26366009 gtgtgtttggacggagggtttaagatgggaagagaggggatagtttgattttcgtttttaaatta 26365945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 34228563 - 34228495
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||| || || |||||| |||| |||||||||||||| ||||  ||||||||| |||||||    
T  34228563 agggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattac 34228495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 616
Target Start/End: Original strand, 37417746 - 37417806
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||| ||||||||||||||||||||||||||| ||| |||  ||||||||  ||||||||    
T  37417746 taaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgttatatagt 37417806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 607
Target Start/End: Complemental strand, 35422095 - 35422044
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||| |||||||| |||||||||  ||||||||||||||||| |||||||||    
T  35422095 taaataatcatatgatacttcaaaaacacttaatttattttaaaaaaacatt 35422044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 43230389 - 43230317
Alignment:
Q  532 aaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||| |||||||||  | ||| ||||| ||| |||||| |||||||| |||||||||||||||| ||||||||    
T  43230389 aaaagttaacatatta--acatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacat 43230317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 434 - 473
Target Start/End: Complemental strand, 48881797 - 48881758
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagg 473  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  48881797 attaagggtgtgtttggattgagggtttaggaggggaagg 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 470
Target Start/End: Complemental strand, 17853106 - 17853072
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagagggga 470  Q
    ||||||||||||||||||||||||||| |||||||    
T  17853106 taagggtgtgtttggatggagggtttaggagggga 17853072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 565 - 603
Target Start/End: Original strand, 23116382 - 23116420
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  23116382 atataatacttcaatcacacttaattttttttaaaaaaa 23116420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 440 - 482
Target Start/End: Complemental strand, 23116470 - 23116428
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    ||||||||||||  ||||||||| |||||||||||||||||||    
T  23116470 ggtgtgtttggaccgagggtttacgaggggaagggaggggagg 23116428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 484
Target Start/End: Original strand, 31553185 - 31553230
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggt 484  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||    
T  31553185 agggtgtgtttggatgga-ggtttaggaggggaagggaggagagggt 31553230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 689
Target Start/End: Complemental strand, 39646497 - 39646467
Alignment:
Q  659 ctcctaaaccgtcaatccaaacacaccctaa 689  Q
    |||||||||||||||||||||||||||||||    
T  39646497 ctcctaaaccgtcaatccaaacacaccctaa 39646467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 563 - 625
Target Start/End: Original strand, 40572354 - 40572416
Alignment:
Q  563 tcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||||||| |||||| |||||||||||||| | ||||||  |||||||| | ||||||    
T  40572354 tcatataatactttaatcacgcttaatttattttagagaaacatattatatagtccgtaattt 40572416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 444 - 506
Target Start/End: Original strand, 41008188 - 41008250
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||| |||||||| |||||||||||||||||||  |||   |||| ||||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattac 41008250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 606
Target Start/End: Complemental strand, 48152099 - 48152061
Alignment:
Q  568 taatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  48152099 taatacttcaatcacactaaatttattttagaaaaacat 48152061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 591
Target Start/End: Original strand, 18127361 - 18127390
Alignment:
Q  562 atcatataatacttcaatcacacttaattt 591  Q
    ||||||||||||||||||||||||||||||    
T  18127361 atcatataatacttcaatcacacttaattt 18127390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 483
Target Start/End: Complemental strand, 28074352 - 28074307
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    ||||||||||||||| ||||||||| ||| |||||| |||||||||    
T  28074352 agggtgtgtttggattgagggtttaggagaggaaggaaggggaggg 28074307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 589
Target Start/End: Original strand, 31571581 - 31571614
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaat 589  Q
    |||||||| |||||||||||||||||||||||||    
T  31571581 taaacaattatataatacttcaatcacacttaat 31571614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 597
Target Start/End: Original strand, 33519416 - 33519449
Alignment:
Q  564 catataatacttcaatcacacttaatttatttta 597  Q
    ||||||||||||||||||||||||||| ||||||    
T  33519416 catataatacttcaatcacacttaattaatttta 33519449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 481
Target Start/End: Original strand, 37620776 - 37620817
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggag 481  Q
    ||||||||||||| ||||||||  ||||||||||||||||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggag 37620817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 40572481 - 40572444
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaa 471  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  40572481 attaatggtgtgtttggattgagggtttaagaggggaa 40572444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Complemental strand, 48094018 - 48093977
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||||||||||| || |||||||||||||||||| |||||    
T  48094018 atcatataatactttaaccacacttaatttattttaaaaaaa 48093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 2e-36; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 438 - 603
Target Start/End: Original strand, 40094933 - 40095093
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||| ||||||||||||||         |||||||    
T  40094933 agggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatg---ttttataaaaagt 40095029  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
     |||| ||  ||| ||| ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  40095030 taacaaat--taacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaa 40095093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 438 - 625
Target Start/End: Original strand, 2858932 - 2859114
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||  |||||||| |||||||||||| ||||||||||         |||||||    
T  2858932 agggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatg---ttatttaaaaagt 2859028  T
Q  538 aaacata-ttataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||| ||| | ||   |||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||| | ||||||    
T  2859029 taacatacttacatta---taaacaatcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaattt 2859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 436 - 625
Target Start/End: Complemental strand, 30010578 - 30010394
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||||||         ||| |    
T  30010578 taagggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatg---ttttttaaata 30010482  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    || |||||||  ||| ||  ||||| ||||||||||||||||| |||||||||||||||||| ||||||||  |||||||| | ||||||    
T  30010481 gttaacatat--taacattataaacgatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaattt 30010394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 438 - 625
Target Start/End: Complemental strand, 41498649 - 41498466
Alignment:
Q  438 agggtgtgtttggatggagggtttaagagggg-aagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaag 536  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||| ||||  ||||||||||||||||| ||||||||||||||         ||||||    
T  41498649 agggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatg---ttttataaaaag 41498553  T
Q  537 taaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    | |||||||  ||| ||| ||||| ||||||||||||||||||||||||||| ||||  || |||| |||  || ||||||||||||||    
T  41498552 ttaacatat--taacatgataaacgatcatataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataattt 41498466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 617
Target Start/End: Complemental strand, 8530045 - 8529869
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||| |||||||||||| || ||||| |||||||||||||| ||  |||||  ||||||||||||||||| |||||||||||||          |||||    
T  8530045 taaggatgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaat---attttttaaaaa 8529949  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagtt 617  Q
    || |||||||  ||| ||| ||||| |||||||||||||||||||||||||||||||||| | ||||||||  |||||||||    
T  8529948 gttaacatat--taacatggtaaacgatcatataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagtt 8529869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 521
Target Start/End: Complemental strand, 12234252 - 12234171
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatg 12234171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 436 - 625
Target Start/End: Original strand, 35349464 - 35349644
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    |||||||||||||||||||||||||||||||||||  || ||||||||||||  ||||||||||||||||| |||||  |||||||         |||||    
T  35349464 taagggtgtgtttggatggagggtttaagagggga--gggggggagggtttacttttcatttttaaattacggacac--tgaaatg---ttttataaaaa 35349556  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    || |||||||  ||| ||| |||||||||||||||||||||||| || |||| ||||||||| ||||| ||  |||||||| | ||||||    
T  35349557 gttaacatat--taacatgataaacaatcatataatacttcaataacccttagtttattttagaaaaaaatgttatatagtccgtaattt 35349644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 438 - 616
Target Start/End: Original strand, 38509894 - 38510067
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||| |  ||||||||||||||||| ||||||||||||||         ||||| |    
T  38509894 agggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatg---tcttttaaaaaat 38509990  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
     ||||| |  ||| | | ||||| || |||||||||||||||||||||| |||||||||| ||||||||  ||||||||    
T  38509991 taacatct--taacacgataaacgataatataatacttcaatcacacttgatttattttagaaaaacatgttatatagt 38510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 435 - 606
Target Start/End: Original strand, 32951318 - 32951481
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    ||||||||||||||||||| |||  | ||||||||||||||||||   || ||  ||||||||||||||||| ||||| ||||||||         ||||    
T  32951318 ttaagggtgtgtttggatgaaggactcaagaggggaagggagggg---gtatacttttcatttttaaattacggacacaatgaaatgttttat---aaaa 32951411  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||| |||||||||  | ||| ||||| ||| |||||||||||||||||||||||||||||||| ||||||||    
T  32951412 agttaacatatta--acatgataaacgatcgtataatacttcaatcacacttaatttattttagaaaaacat 32951481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 441 - 513
Target Start/End: Original strand, 20576136 - 20576208
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacact 513  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacact 20576208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 435 - 597
Target Start/End: Original strand, 50744282 - 50744435
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    |||||||| |||||||||||||| |||| |||||||| |||||      |||| |||||||||||||||||| ||||||||||||||         |||     
T  50744282 ttaagggtatgtttggatggaggatttatgaggggaatggagga-----tttagatttcatttttaaattacggacactatgaaatgttttttt--aaag 50744374  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttatttta 597  Q
    ||| |||||||||  | ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  50744375 agttaacatatta--acatgataaacgatcatataatacttcaatcacacttaatttatttta 50744435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 51597822 - 51597739
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||| |||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  51597822 aaaaagttaacatatta--agatgataaacaatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagt 51597739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 435 - 487
Target Start/End: Complemental strand, 20607464 - 20607412
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggttta 487  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20607464 ttaagggtgtgtttggatggagggtttaggaggggaagggaggggagggttta 20607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 12234007 - 12234078
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||| |||| |||| ||||||||||||    
T  12234007 ttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattac 12234078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 41498401 - 41498471
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||  |||| |||||||||||    
T  41498401 ttaagggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 35349711 - 35349638
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||| |||||||||||||||  |||||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  35349711 tatttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattac 35349638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 606
Target Start/End: Complemental strand, 7444741 - 7444576
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    |||| ||||||||||||| || |||||  | |||||| ||||||||||||||  ||||||||| ||||||| |||||||| |||||         |||||    
T  7444741 taagagtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatg---atttttaaaaa 7444645  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    || |||||||  ||| ||  ||||| |||||||||||||||||||||||||  |||| |||| ||||||||    
T  7444644 gttaacatat--taacataataaacgatcatataatacttcaatcacacttggtttaatttagaaaaacat 7444576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 42230669 - 42230619
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  42230669 taaacaatcatataatacttcaatcacacttaatttatttttaaaaaacat 42230619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 605
Target Start/End: Original strand, 44211018 - 44211067
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaaca 605  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  44211018 taaacgatcatataatacttcaatcacacttaatttattttagaaaaaca 44211067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 433 - 521
Target Start/End: Original strand, 2470725 - 2470813
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||   || ||||||||||||||  ||||||| |||||    
T  2470725 tatttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatg 2470813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 30010332 - 30010400
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||||  |||| | ||||||||||    
T  30010332 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattac 30010400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 436 - 520
Target Start/End: Complemental strand, 47261517 - 47261433
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||||||||||||||| || ||||  |||||||| ||||| ||||||||| |||| |||||||| ||| |||||||| ||||    
T  47261517 taagggtgtgtttggatgggggatttagaaggggaagagagggtagggtttaattttcttttttaaagtacggacactataaaat 47261433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||  |||  |||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 603
Target Start/End: Complemental strand, 41676516 - 41676363
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaac 541  Q
    ||||||||||| |||||||||     ||||| ||||||||||||||  ||||||||||||||||| |||||||| |||||           ||| ||| |    
T  41676516 tgtgtttggatcgagggttta-----ggaagagaggggagggtttacttttcatttttaaattacggacactataaaatgtttttttttttaaattaa-c 41676423  T
Q  542 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||||  | ||| ||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  41676422 atatta--acatgataaacgatcatataatactacaatcacacttaatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 483
Target Start/End: Original strand, 26324013 - 26324059
Alignment:
Q  437 aagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  26324013 aagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 26324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 26940956 - 26941006
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  26940956 taaacagtcatataatacttcaatcacacttgatttattttagaaaaacat 26941006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 502
Target Start/End: Complemental strand, 38510140 - 38510074
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaa 502  Q
    |||| ||||||||||||  |||||||| ||||||||||||||||||||||||  |||| ||||||||    
T  38510140 taagagtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaa 38510074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 625
Target Start/End: Original strand, 45585776 - 45585867
Alignment:
Q  532 aaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||| |||||||||  | ||| ||||| |||||||| |||||| |||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  45585776 aaaagttaacatatta--acatgataaacgatcatatagtacttcgatcacacttaatttattttaaaaaaacatgttatatagtccgtaattt 45585867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 616
Target Start/End: Original strand, 49946707 - 49946761
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||    
T  49946707 atcatataatacttcaatcacatttaatttattttaaaaaaacatgttatatagt 49946761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 438 - 507
Target Start/End: Complemental strand, 28770965 - 28770896
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    |||||||||||||||||| |||||| ||||| || |||| ||||||||||  ||| ||||||||||||||    
T  28770965 agggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattaca 28770896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 32951562 - 32951494
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||| ||| ||||| ||| |||||||||||||| |||||  |||| ||||||||||||    
T  32951562 agggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattac 32951494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 606
Target Start/End: Original strand, 36285664 - 36285737
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||| |||||||||  | ||| ||||| ||||||||||||||||||||||||| || ||||||| ||||||||    
T  36285664 aaaaagttaacatatta--acatgataaacgatcatataatacttcaatcacacttgatatattttaaaaaaacat 36285737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 625
Target Start/End: Original strand, 1085609 - 1085672
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| || || |||| ||||||    
T  1085609 atcatataatacttcaaaaacacttaatttattttaaaaaaacattttacatggttcgtaattt 1085672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 10391869 - 10391940
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||  ||||||| |||| |||| ||||||||  ||||||||||||||  |||||||||||||||||    
T  10391869 ttaagggtgaatttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattac 10391940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 35927810 - 35927881
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||||| |||| |||| |||||||| ||||||||||| | | ||||  |||||||||||    
T  35927810 attaagggtgtgtttggattgaggttttaggaggggaatggaggggagggctcacatttattttttaaatta 35927881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 51303382 - 51303429
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  51303382 taagggtgtgtttggattgagggtttaggaggggaggggaggggaggg 51303429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 1085487 - 1085533
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||||    
T  1085487 taagggtgtgtttggatggagggtttaggagggggatggaggggagg 1085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 510
Target Start/End: Complemental strand, 40095180 - 40095106
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||||||| |||||||||  |||  |||||| || ||||||||  |||| ||||||||||||||||    
T  40095180 taagggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagac 40095106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 506
Target Start/End: Complemental strand, 2859169 - 2859108
Alignment:
Q  445 gtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||| || |||||| ||||||||||||||||||||||||  |||  ||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattac 2859108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 606
Target Start/End: Complemental strand, 10392108 - 10391953
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaac 541  Q
    ||||||||||||||||||||| |||||||     || ||| |||||  |||| ||||||||||||| ||| ||| |||||         ||||||| |||    
T  10392108 tgtgtttggatggagggtttaggagggga-----ggagagagtttacttttcgtttttaaattacaaacattattaaatgttttttt--aaaaagttaac 10392016  T
Q  542 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||  | ||| |||||  ||||||||||||| ||||||| ||||||||||||| ||||||||    
T  10392015 atatta--acatgataaacggtcatataatactttaatcacaattaatttattttagaaaaacat 10391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 607
Target Start/End: Complemental strand, 33643393 - 33643348
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||    
T  33643393 atcatataatacttcaaaaacacttaatttattttaaaaaaacatt 33643348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 612
Target Start/End: Original strand, 42742430 - 42742478
Alignment:
Q  563 tcatataatacttcaatcacacttaatttattttacaaaaacattgtata 612  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  42742430 tcatatagtacttcaatcacacttaatttatttta-aaaaacattttata 42742478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 618
Target Start/End: Original strand, 50079490 - 50079559
Alignment:
Q  549 aatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttc 618  Q
    |||||| ||||  |||||||||||||| ||  ||||||||||||||||| ||||||||| ||||| ||||    
T  50079490 aatatgataaatgatcatataatactttaaaaacacttaatttattttaaaaaaacattttatattgttc 50079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 433 - 477
Target Start/End: Complemental strand, 1085739 - 1085695
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggagg 477  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||    
T  1085739 tatttagggtgtgtttggatagagggtttaggaggggaagggagg 1085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 446 - 506
Target Start/End: Complemental strand, 25268500 - 25268440
Alignment:
Q  446 tttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||  |||||||| ||||||||||||||  || | ||||||||||||    
T  25268500 tttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattac 25268440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 520
Target Start/End: Original strand, 26940842 - 26940925
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||| ||||||||| || ||||||||||||| | ||| || ||||||||| |  ||| |||||||||||| ||||||||||||||    
T  26940842 taagagtgtgtttgaattgagggtttaagagtg-aagagatgggagggttcactttttatttttaaattatagacactatgaaat 26940925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 40709292 - 40709360
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||  | |||||||||||||||||||| |||||  |||  |||| ||||||||||||    
T  40709292 agggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattac 40709360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 43551996 - 43552064
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| |||||| | || ||| ||| | |||||||||  |||||||||||||||||    
T  43551996 agggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattac 43552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 613
Target Start/End: Complemental strand, 2506664 - 2506613
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatat 613  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| |||||    
T  2506664 atcatataatacttcaaaaacacttaatttattttgaaaaaacattttatat 2506613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 12234135 - 12234072
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||| |||| |||||||||||| |||||||||| ||||||||  |||||||| | ||||||    
T  12234135 atcatattatacatcaatcacacttgatttattttagaaaaacatgttatatagtccgtaattt 12234072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 25268389 - 25268326
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||  ||||||||||||||||| ||| ||||| || || ||||| |||||    
T  25268389 atcatataatacttcaaaaacacttaatttattttaaaaatacattttacattgttcaaaattt 25268326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 594
Target Start/End: Complemental strand, 49065579 - 49065548
Alignment:
Q  563 tcatataatacttcaatcacacttaatttatt 594  Q
    ||||||||||||||||||||||||||||||||    
T  49065579 tcatataatacttcaatcacacttaatttatt 49065548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Original strand, 51303695 - 51303757
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||||| ||||||||||||||||| | |||| ||||||||| ||||  |||||||||||    
T  51303695 atcatataatagttcaatcacacttaattga-tttaaaaaaacattttatagtgttcataattt 51303757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 440 - 502
Target Start/End: Original strand, 23536782 - 23536844
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaa 502  Q
    |||||||||||||||||| |||| |||| ||||||| ||||| |||||| ||||  |||||||    
T  23536782 ggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 507
Target Start/End: Complemental strand, 525344 - 525275
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    ||||||||||||||| ||||||||| || ||||||||| || || ||| |  ||| ||||||||||||||    
T  525344 agggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattaca 525275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 506
Target Start/End: Original strand, 7444481 - 7444546
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||| |||| ||||||||  |||| ||||||| |||||||||||  |||| ||||||||||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattac 7444546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 690
Target Start/End: Original strand, 26941047 - 26941080
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaag 690  Q
    |||||||||||| |||||||||||||||||||||    
T  26941047 ccctcctaaaccctcaatccaaacacaccctaag 26941080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 690
Target Start/End: Complemental strand, 30010362 - 30010329
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaag 690  Q
    |||||||||||| |||||||||||||||||||||    
T  30010362 ccctcctaaaccctcaatccaaacacaccctaag 30010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Original strand, 51303503 - 51303544
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||||||||||||||  ||||||||||||||||| |||||    
T  51303503 atcatataatacttcaaaaacacttaatttattttaaaaaaa 51303544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 503
Target Start/End: Original strand, 51597672 - 51597733
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaat 503  Q
    ||||||||||| ||||||||| ||  |||||||||||||| |||||  |||| |||||||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaat 51597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 4e-34; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 440 - 625
Target Start/End: Complemental strand, 7544378 - 7544198
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaa 539  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||   ||||||||||||||||| ||||||||||||||         ||||||| |    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatg---ttttttaaaaagtta 7544282  T
Q  540 acatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||  ||| ||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||| | ||||||    
T  7544281 gcatat--taacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtaattt 7544198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 439 - 616
Target Start/End: Complemental strand, 13634954 - 13634782
Alignment:
Q  439 gggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagta 538  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||  |||||||||||||||||  |||||||||||||         |||||||     
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatg---ttttttaaaaagtt 13634858  T
Q  539 aacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||||  ||| ||| ||||| ||||||||||| ||||||||||| |||||||||||| ||||||||  ||||||||    
T  13634857 aacatat--taacatgataaacgatcatataataattcaatcacacataatttattttagaaaaacatgttatatagt 13634782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 435 - 616
Target Start/End: Complemental strand, 16938726 - 16938550
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||         |||     
T  16938726 ttaagggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatg---ttttttaaag 16938630  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||| ||||| |  ||| ||| ||||  ||||||||||| |||||||||||||||||||||||| | ||||||  ||||||||    
T  16938629 agttaacatgt--taacatgataaatgatcatataatatttcaatcacacttaatttattttagagaaacatgttatatagt 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 441 - 515
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactat 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 440 - 606
Target Start/End: Complemental strand, 26415136 - 26414974
Alignment:
Q  440 ggtgtgtttggatggagggtttaagagggg-aagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagta 538  Q
    ||||||||||||||||||||||| |||||| || ||||||||| |||||  |||||||||||| |||||||||||||||||||         |||||||     
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatg---ttttataaaaagtt 26415040  T
Q  539 aacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||  ||| ||| ||||| | |||||||||||||||||||||||||| ||||||| ||||||||    
T  26415039 aacatat--taacatgataaacgaccatataatacttcaatcacacttaatatattttagaaaaacat 26414974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 438 - 625
Target Start/End: Complemental strand, 37607138 - 37606957
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| |||||||  || ||||||  ||||||||||||| |||||| |||||||||||         |||||||    
T  37607138 agggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatg---ttttataaaaagt 37607042  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||  ||| ||| ||||| ||||||||||||||||||||||  |||||||||||| ||||||||| |||||||| | ||||||    
T  37607041 taacatat--taacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacatt-tatatagtccttaattt 37606957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 438 - 607
Target Start/End: Complemental strand, 37779347 - 37779183
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| |||||||  || ||||||  ||||||||||||| |||||| |||||||||||         |||||||    
T  37779347 agggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatg---ttttataaaaagt 37779251  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
     |||||||  ||| ||| ||||| ||||||||||||||||||||||  |||||||||||| |||||||||    
T  37779250 taacatat--taacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacatt 37779183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 521
Target Start/End: Complemental strand, 1658055 - 1657974
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||| |||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatg 1657974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 438 - 625
Target Start/End: Complemental strand, 37551649 - 37551470
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||| ||||||  ||||||||||||| |||||||||  |||||||         |||||||    
T  37551649 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacac--tgaaatg---ttttataaaaagt 37551555  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||  ||| ||| ||||| ||||||||||||||||||||||| |||||||||||  |||||| || |||||||| ||||||||    
T  37551554 taacatat--taacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataattt 37551470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 438 - 625
Target Start/End: Complemental strand, 37654479 - 37654300
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||| ||||||  ||||||||||||| |||||||||  |||||||         |||||||    
T  37654479 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacac--tgaaatg---ttttataaaaagt 37654385  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||  ||| ||| ||||| ||||||||||||||||||||||| |||||||||||  |||||| || |||||||| ||||||||    
T  37654384 taacatat--taacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataattt 37654300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 438 - 606
Target Start/End: Complemental strand, 10476272 - 10476109
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||  | | |||||||||||||   |||||||||||          |||||      
T  10476272 agggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaat---atttataaaaaaaa 10476176  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||  ||| ||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  10476175 aaacatat--taagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacat 10476109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 435 - 625
Target Start/End: Original strand, 8502832 - 8503017
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    ||||||||||||||||||||| |||||| || ||||| ||| ||||||||| |  ||||||||||||||||| |||| ||||||||          ||||    
T  8502832 ttaagggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaat---attttttaaaa 8502928  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||| |||| ||  ||||||| || ||||| | ||||||||||||||||||||||||||||||| |||| |||  |||||||| | ||||||    
T  8502929 agttaacaaat--taatatgatacacaattacataatacttcaatcacacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 14245290 - 14245207
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||   ||||||||||||||||| |||||| |||||||    
T  14245290 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatg 14245207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 436 - 521
Target Start/End: Original strand, 14245086 - 14245171
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||  |||| |||||||||||| |||||| |||||||    
T  14245086 taagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatg 14245171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 13634709 - 13634776
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaat 503  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||    
T  13634709 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 26414891 - 26414961
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||||||||||  |||| ||||||||||||    
T  26414891 taagggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattac 26414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 443 - 616
Target Start/End: Complemental strand, 36363271 - 36363103
Alignment:
Q  443 gtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaaca 542  Q
    |||||||||||||||||||| |||||||||||||| ||| ||| |  ||||||||||||||||| || ||||| |||||         | ||||| ||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatg---tcttttagaaagttaaca 36363175  T
Q  543 tattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||  ||  ||| |||||||| |||||| |||||||| |||||| |||||||||| ||||||||  ||||||||    
T  36363174 tat--tagcatgataaacaatgatataaaacttcaatgacacttgatttattttagaaaaacatgttatatagt 36363103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 490 - 602
Target Start/End: Original strand, 36392202 - 36392309
Alignment:
Q  490 tttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaat 589  Q
    ||||||||||||||||||||||||||||||||         ||||||| |||||||||  | ||| ||||| ||||||||||||||||||||||||||||    
T  36392202 tttcatttttaaattacagacactatgaaatgttttat---aaaaagttaacatatta--acatgataaacgatcatataatacttcaatcacacttaat 36392296  T
Q  590 ttattttacaaaa 602  Q
     ||||||| ||||    
T  36392297 ctattttagaaaa 36392309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 521
Target Start/End: Original strand, 15986624 - 15986707
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||  |||| |||| ||||||| ||||||||| ||| |||||    
T  15986624 agggtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttacagacattataaaatg 15986707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 7544134 - 7544204
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||||| | || |||| ||||||||||||    
T  7544134 taagggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattac 7544204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 434 - 521
Target Start/End: Original strand, 10650423 - 10650512
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaa--gggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||| |||| ||||||||||||| |||| ||||||||  ||||||||||| ||||  ||| ||||||||||||| ||||||||||||||    
T  10650423 attaatggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatg 10650512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 625
Target Start/End: Complemental strand, 9857011 - 9856942
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||| ||||||||||||||||||||||||| |||||||||| ||||||||  |||||||| | ||||||    
T  9857011 taaacgatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccttaattt 9856942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 616
Target Start/End: Original strand, 2550465 - 2550525
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||||  ||||||||    
T  2550465 taaacaatcatataatacttcaatcacacgtaatttattatagaaaaacatgttatatagt 2550525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 531 - 606
Target Start/End: Original strand, 10072737 - 10072810
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||| |||||||||  | ||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  10072737 aaaaagttaacatatta--acatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 10072810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 16938479 - 16938527
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggttt 486  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  16938479 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttt 16938527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaa 501  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 11757002 - 11756939
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||  |||||||||| ||||||    
T  11757002 atcatataatactttaatcacacttaatttattttagagaaacatgttatatagttcgtaattt 11756939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 466 - 605
Target Start/End: Original strand, 20513473 - 20513611
Alignment:
Q  466 ggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacatattataatatgttaaacaatca 565  Q
    |||||| |||||| ||| ||||  ||||||||||||| ||||||||||||||||||         ||||||| |||||||||| ||  | ||||| ||||    
T  20513473 ggggaaaggagggaaggatttacttttcatttttaaactacagacactatgaaatgtttttt---aaaaagttaacatattatcat--gataaacgatca 20513567  T
Q  566 tat----aatacttcaatcacacttaatttattttacaaaaaca 605  Q
    |||    ||||||||||||||||||||||||||||| |||||||    
T  20513568 tatatataatacttcaatcacacttaatttattttataaaaaca 20513611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 33744193 - 33744260
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||||||||| | | || |||||||||||||||||||  |||| |||||||||||    
T  33744193 agggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 34981054 - 34980987
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||  ||||||||||||||||||||||||||||||||  |||  |||| |||||||||||    
T  34981054 agggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaatta 34980987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 606
Target Start/End: Original strand, 9798615 - 9798775
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaa 540  Q
    ||||||||||||||||| |||| ||||  |||||| | ||| |||||  ||||||||||||||||| || |||| ||||||         ||||||| ||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgtttttt---aaaaagtcaa 9798711  T
Q  541 catattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
      |||| ||| |||  |||| |||||||||||||||||||||| ||||||||||| | ||||||||    
T  9798712 --tattttaacatgaaaaacgatcatataatacttcaatcacaattaatttatttaagaaaaacat 9798775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 603
Target Start/End: Original strand, 28279476 - 28279636
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||  || ||||| || || ||   ||||  ||||||||||||||||  |||| |||||||||         |||||||    
T  28279476 agggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgtttttt---aaaaagt 28279572  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
     |||||||||  | ||| ||||  |||||||||||||||||||||||||| ||||||||| |||||    
T  28279573 taacatatta--acatgataaatgatcatataatacttcaatcacacttagtttattttagaaaaa 28279636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 517
Target Start/End: Original strand, 2550387 - 2550431
Alignment:
Q  473 ggaggggagggtttaaatttcatttttaaattacagacactatga 517  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  2550387 ggaggggagggtttacttttcatttttaaattacagacactatga 2550431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 434 - 470
Target Start/End: Original strand, 10072653 - 10072689
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagagggga 470  Q
    |||||||||||||||||||||||||||||||||||||    
T  10072653 attaagggtgtgtttggatggagggtttaagagggga 10072689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 11436936 - 11437012
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    ||||||| |||||||||| ||||||||| ||||||||||||| |||||| |||  || | |||||||||||| ||||    
T  11436936 ttaagggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggaca 11437012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 434 - 478
Target Start/End: Complemental strand, 20147118 - 20147074
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggg 478  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  20147118 attaagggtgtgtttggattgagggtttaggaggggaagggaggg 20147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 478
Target Start/End: Original strand, 40305670 - 40305710
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggg 478  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggaggg 40305710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 2184058 - 2183975
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||||||||||||||||||||||  ||  ||||| |||  |||| | |||||||||| |||| ||| |||||    
T  2184058 agggtgtgtttggatggagggtttaagaggggaagatagaagagggcttatttttcctctttaaattacggacattataaaatg 2183975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 10204574 - 10204621
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  10204574 taagggtgtgtttggatcgagggtttaggaggggaagggaggtgaggg 10204621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 435 - 502
Target Start/End: Original strand, 10476023 - 10476090
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaa 502  Q
    ||||||||||||||| || ||||||||| |||||||||||| | |||||||||  |||| ||||||||    
T  10476023 ttaagggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 36392396 - 36392325
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||| |||||||||| ||||||||| ||||||||| ||| || | ||||| ||||| ||||||||||||    
T  36392396 ttaagggcgtgtttggattgagggtttaggaggggaagagagcggtgtgtttatatttcgtttttaaattac 36392325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 440 - 487
Target Start/End: Original strand, 42681450 - 42681497
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggttta 487  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  42681450 ggtgtgtttggattgagggtttaagaggggaaaggaggggaggattta 42681497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 21581188 - 21581150
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggagggg 479  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaagggagggg 21581150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 34980812 - 34980878
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||| || |||||| ||||||||||||||| |||||| |  ||| |||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattac 34980878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 510
Target Start/End: Original strand, 40815295 - 40815369
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||||||| || | |||| |||||||||||| | |||| ||||  |||| ||||||||||||||||    
T  40815295 taagggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagac 40815369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 511
Target Start/End: Complemental strand, 10204820 - 10204747
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    ||||||||||||||  ||| ||||| |||||||||||||||||||  |||  |||| ||||||| |||||||||    
T  10204820 agggtgtgtttggaaagagagtttaggaggggaagggaggggaggacttacttttcttttttaatttacagaca 10204747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 607
Target Start/End: Complemental strand, 10650546 - 10650509
Alignment:
Q  570 atacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||||||||||||| |||||||||    
T  10650546 atacttcaatcacacttaatttattttagaaaaacatt 10650509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 17024338 - 17024387
Alignment:
Q  557 aaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||| |||||||||||||||||||  ||||||||||||||| ||||||||    
T  17024338 aaacgatcatataatacttcaatcgtacttaatttattttagaaaaacat 17024387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 505
Target Start/End: Complemental strand, 28279723 - 28279654
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||| ||| || ||  ||||||||||||| |||||||||  |||| |||||||||||    
T  28279723 taagggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaatta 28279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 40305911 - 40305866
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggag 481  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||||    
T  40305911 taagggtgtgtttggattgagggtttaggaggagaagggaggggag 40305866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 482
Target Start/End: Complemental strand, 5688634 - 5688590
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||    
T  5688634 agggtgtgtttggattgagggtttaggaggggaagggaagggagg 5688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 614
Target Start/End: Original strand, 33424921 - 33424973
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatata 614  Q
    |||||||||||||| ||||| | ||||||||||||| ||||||||| ||||||    
T  33424921 atcatataatactttaatcagatttaatttattttataaaaacattttatata 33424973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Original strand, 4373685 - 4373748
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||||| |||||||||||||||||||||||  |||||| |  |||||||| | ||||||    
T  4373685 atcatataatatttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaattt 4373748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 11419188 - 11419259
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||||||  |||||||||||| || |||||| ||| |||| |||||  ||||||||| ||||||    
T  11419188 attaagggtgtgtttacatggagggtttatgaagggaagagagaggagagtttacttttcattttcaaatta 11419259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 12035933 - 12035980
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    |||||||||||||||||| || |||||| ||||||||||||| |||||    
T  12035933 ttaagggtgtgtttggatagatggtttaggaggggaagggagaggagg 12035980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 483
Target Start/End: Complemental strand, 15986870 - 15986823
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    ||||||||||||||||| ||||||||| |||||||||| || ||||||    
T  15986870 taagggtgtgtttggattgagggtttaggaggggaaggaagaggaggg 15986823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 657 - 691
Target Start/End: Original strand, 5688604 - 5688638
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaaga 691  Q
    |||||||||||| ||||||||||||||||||||||    
T  5688604 ccctcctaaaccctcaatccaaacacaccctaaga 5688638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 657 - 691
Target Start/End: Original strand, 14245260 - 14245294
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaaga 691  Q
    |||||||||||| ||||||||||||||||||||||    
T  14245260 ccctcctaaaccctcaatccaaacacaccctaaga 14245294  T

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Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 509
Target Start/End: Original strand, 14681467 - 14681540
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacaga 509  Q
    ||||| |||||||||||| ||||||||| |||||||| ||| | || |||| || |||| |||||||||||||||    
T  14681467 ttaagtgtgtgtttggattgagggtttaggaggggaa-ggaagtgatggttaaattttcttttttaaattacaga 14681540  T

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Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 14681600 - 14681550
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||| ||||||| | ||||||||||| ||||||||||||| ||||||||    
T  14681600 taaacagtcatatattccttcaatcacatttaatttattttaaaaaaacat 14681550  T

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Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 42681578 - 42681524
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||||||||||| ||||||||| || |||||||| ||||||||  ||||||||    
T  42681578 atcatataatactttaatcacactaaaattattttagaaaaacatgttatatagt 42681524  T

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Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 607
Target Start/End: Complemental strand, 10204701 - 10204656
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||  ||||||||||||||||| ||| |||||    
T  10204701 atcatataatacttcaaaaacacttaatttattttaaaaagacatt 10204656  T

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Target: chr3 (Bit Score: 74; Significance: 2e-33; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 438 - 606
Target Start/End: Complemental strand, 24560461 - 24560298
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||| |||||  ||||||||||||||||| ||||||||||||||         |||||||    
T  24560461 agggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatg---ttttttaaaaagt 24560365  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
     |||||||  ||| ||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  24560364 taacatat--taacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacat 24560298  T

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Target: chr3; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 440 - 606
Target Start/End: Original strand, 41110323 - 41110484
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaa 539  Q
    |||||||||||||||||| |||| |||||||||||||| || ||||||  ||||||||||||||||| |||||||||||||          ||||||| |    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaat---attttataaaaagtta 41110419  T
Q  540 acatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  41110420 acatat--taacatgataaacaatcatataatacttcaatcacacttaatttattttcgaaaaacat 41110484  T

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Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 444 - 625
Target Start/End: Original strand, 27541937 - 27542113
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaacat 543  Q
    ||||||||| ||||||||| |||||||||||||| || |||| | ||||||||||||||||| ||||||||||||||          |||||   |||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaat---acttgttaaaaatctaacat 27542033  T
Q  544 attataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||  ||| ||| ||||| |||||||||||||||||||||| ||||||||||||| ||||| ||  |||||||||||||||||    
T  27542034 at--taacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataattt 27542113  T

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Target: chr3; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 438 - 602
Target Start/End: Original strand, 41039950 - 41040109
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    |||||||||||||||||| |||||| ||||||||| ||| | ||| ||||| ||||| |||||||||||||||||||||||||          |||||||    
T  41039950 agggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaat---attttataaaaagt 41040046  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaa 602  Q
     |||||||  ||| ||| ||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  41040047 taacatat--taacatgataaacaatcatataatacttcaatcacgcttactttattttaaaaaa 41040109  T

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Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 438 - 606
Target Start/End: Original strand, 36568904 - 36569066
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||| |||| | ||||||||||||||| |  |||||||||||||         |||||||    
T  36568904 agggtgtgtttggatggagggtttaggagtggaatggaggggagagttt-attttcatttttaaatttcgaacactatgaaatg---tttttcaaaaagt 36568999  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
     |||||||  ||| ||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  36569000 taacatat--taacatgataaacaatcgtataatagttcaatcacacttaatttattttagaaaaacat 36569066  T

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Target: chr3; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 548 - 625
Target Start/End: Complemental strand, 46205025 - 46204948
Alignment:
Q  548 taatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  46205025 taatatgttaaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataattt 46204948  T

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Target: chr3; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 25655219 - 25655148
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  25655219 ttaagggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattac 25655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 438 - 602
Target Start/End: Original strand, 9312476 - 9312630
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||| ||||||||| |||||||||| ||||||||||||||     ||| | |||||||||||||||||||||||||||||||          |||||||    
T  9312476 agggtatgtttggattgagggtttaataggggaagggaggg-----tttgattttcatttttaaattacagacactatgaaat---attttgtaaaaagt 9312567  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaa 602  Q
     |||||||  ||| ||| |||||||||||||||||||  ||||||||||||||||||||| ||||    
T  9312568 taacatat--taacatgataaacaatcatataatactcaaatcacacttaatttattttagaaaa 9312630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 438 - 625
Target Start/End: Original strand, 18654600 - 18654782
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||||||||||||||||||||| ||||| ||| || ||||||||||| |||||||||||||||||| ||| |||| ||||           || |||    
T  18654600 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaat---attttttgaagagt 18654696  T
Q  538 aaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||  ||| ||| ||||  |||||||||||||||||| ||||||||||||||||| | ||||||  |||||||| | ||||||    
T  18654697 taacatat--taacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaattt 18654782  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 436 - 521
Target Start/End: Complemental strand, 34641236 - 34641151
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||| |||||||||||| |||| ||| |||||    
T  34641236 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatg 34641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 436 - 509
Target Start/End: Original strand, 28581184 - 28581257
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacaga 509  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||||||||  ||||||||||||||||||||    
T  28581184 taagagtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacaga 28581257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 435 - 606
Target Start/End: Original strand, 16275702 - 16275868
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaa 534  Q
    |||| |||||||||||||||| ||||||  |||| |||||||||||| ||| |   |||||||||||||| | |||| |||||||||         ||||    
T  16275702 ttaacggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttat---aaaa 16275798  T
Q  535 agtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||| ||| |||||  | ||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  16275799 agttaacttatta--acatgataaacaaccatataatacttcaatcacacttgatttattttagaaaaacat 16275868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 440 - 606
Target Start/End: Complemental strand, 52474157 - 52473996
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaa 539  Q
    |||||||||||| |  ||||||| ||||||||||||| ||||||||||  ||| ||||||||||||| ||  |||||||||          ||||||| |    
T  52474157 ggtgtgtttggaggatgggtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaat---attttgtaaaaagtta 52474061  T
Q  540 acatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||  ||||| |||||| |||||||||||||||||||||  |||||||||||| || |||||    
T  52474060 acatatta--atatgataaacagtcatataatacttcaatcacatgtaatttattttaaaataacat 52473996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 556 - 625
Target Start/End: Complemental strand, 21773913 - 21773844
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  21773913 taaacaatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 21773844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 438 - 625
Target Start/End: Original strand, 25654971 - 25655154
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagt 537  Q
    ||||||| ||| |||||||  |||| ||||||||||||||||||||||||  ||||||||||| |||||  |||||| ||||||          || |||    
T  25654971 agggtgtatttagatggaga-tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttg---aagagt 25655066  T
Q  538 aaacatattataatatgttaaacaatcatat--aatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
     |||||||||  ||||| ||||  |||||||  ||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  25655067 taacatatta--atatgataaatgatcatatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 25655154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 24253966 - 24253883
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||||||||||||  |||||||||||||| ||| ||||  |||| |||||||||||| |||| ||| |||||    
T  24253966 agggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatg 24253883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 14898107 - 14898057
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  14898107 taaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 14898057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 24560215 - 24560285
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||  |||||||| |||||||||||||||||||||||   |||| ||||||||||||    
T  24560215 taagggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattac 24560285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 28582758 - 28582685
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||| ||||||||||||||  |||| |||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  28582758 tatttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattac 28582685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 26136039 - 26135959
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||||| ||| |||||||||||| ||||||||||||| ||||||||||  |||| |||||||||||| |||| ||| ||||    
T  26136039 ggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaat 26135959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 434 - 603
Target Start/End: Original strand, 37102155 - 37102308
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaa 533  Q
    |||||||||||||||||||||||||||||          |||||||||||||||  ||||||||||||||||| ||||||||||||||         |||    
T  37102155 attaagggtgtgtttggatggagggttta----------ggaggggagggtttagttttcatttttaaattacggacactatgaaatgtttttt---aaa 37102241  T
Q  534 aagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||| |||||||||  |||     ||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  37102242 aagttaacatattaacataat---aacgatcatataatacttcaaccacacttgatttattttagaaaaa 37102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 436 - 487
Target Start/End: Original strand, 5903547 - 5903598
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggttta 487  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  5903547 taagggtgtgtttggattgaggatttaagaggggaaggcaggggagggttta 5903598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 6803448 - 6803373
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||| |||||||||||| || |||||| ||||||||| |||| ||| |||||| |||| ||||||||||||||||    
T  6803448 ttaagtgtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagac 6803373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 41110568 - 41110497
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||| ||||||||  ||||||||||||| ||| ||||||  |||| ||||||||||||    
T  41110568 ttaagggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattac 41110497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 444 - 505
Target Start/End: Original strand, 10943620 - 10943681
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||||||||||||||||||| ||||| || | ||||| |||| |||||||||||    
T  10943620 tgtttggatggagggtttaagaggggaaaggaggagaagatttaattttcttttttaaatta 10943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 440 - 521
Target Start/End: Original strand, 13082856 - 13082937
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||||||||||  || | ||| ||| ||| ||||||| ||| ||||||||| ||| ||||||||||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaaggtttaatttttatttttaaaatacggacactatgaaatg 13082937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 220641 - 220573
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||  ||||  |||| ||||||||||||    
T  220641 agggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattac 220573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 615
Target Start/End: Original strand, 2387864 - 2387932
Alignment:
Q  547 ataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatag 615  Q
    |||| ||| ||||| ||||||||||| || ||||||||||||||||||||| ||||||||  |||||||    
T  2387864 ataacatgataaacgatcatataataatttaatcacacttaatttattttagaaaaacatgttatatag 2387932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 434 - 482
Target Start/End: Original strand, 8432257 - 8432305
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  8432257 attaagggtgtgtttgaatggagggtttacgaggggaagagaggggagg 8432305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 511
Target Start/End: Complemental strand, 14898227 - 14898151
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    ||||||||||||||| || ||||||||||||| ||||| |||| |||  ||||  ||||||||||||||||| ||||    
T  14898227 ttaagggtgtgtttgaattgagggtttaagagaggaagagaggagagaatttagctttcatttttaaattacggaca 14898151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 23028168 - 23028088
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||||||||||||||||||  ||||||||  ||||| |||  |||  ||| ||||||||||||| |||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaat 23028088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 625
Target Start/End: Complemental strand, 26135935 - 26135859
Alignment:
Q  549 aatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||| |||| ||| ||||||||||||||  ||||||||||||||||  ||||||||| || || |||||||||||    
T  26135935 aatatgataaataattatataatacttcaaaaacacttaatttatttttaaaaaacattttacattgttcataattt 26135859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 521
Target Start/End: Original strand, 30200123 - 30200171
Alignment:
Q  473 ggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  30200123 ggaggggagggtttagttttcatttttaaattacggacactatgaaatg 30200171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 625
Target Start/End: Original strand, 21090190 - 21090253
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||  ||||||||||||||||| ||||| ||| || || |||||||||||    
T  21090190 atcatataatacttcaaaaacacttaatttattttaaaaaaatattttacattgttcataattt 21090253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 482
Target Start/End: Original strand, 42772046 - 42772088
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  42772046 ggtgtgtttggattgaaggtttaagaggggaagggaggggagg 42772088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 18654850 - 18654797
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagaggggaagggaggggagggttt 486  Q
    ||||||| ||||||||| || ||||||||| |||||||||||||||||| ||||    
T  18654850 tattaagagtgtgtttgaattgagggtttaggaggggaagggaggggagagttt 18654797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 503
Target Start/End: Complemental strand, 25499139 - 25499074
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaat 503  Q
    |||| |||||||||||||| |||||||||||| || ||||| ||||||||  |||| |||||||||    
T  25499139 agggggtgtttggatggagagtttaagagggggagagagggaagggtttacttttcttttttaaat 25499074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 506
Target Start/End: Complemental strand, 30200341 - 30200267
Alignment:
Q  436 taagggtgtgtttggat----ggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||||||||    ||||||| || ||||||||||||||| ||||||||  |||| ||||||||||||    
T  30200341 taagggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattac 30200267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 603
Target Start/End: Complemental strand, 52185170 - 52185100
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||||| |||||||||  | ||| |||||||||||||||||||||||| | | ||||||||||||| |||||    
T  52185170 aaaaagttaacatatta--acatgataaacaatcatataatacttcaattatatttaatttattttagaaaaa 52185100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 55428619 - 55428550
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    ||||||||||| ||||||||| ||||||||||||||||| | ||||  |||| | |||||||||| ||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggaca 55428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 442 - 478
Target Start/End: Original strand, 31664391 - 31664427
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggg 478  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31664391 tgtgtttggattgagggtttaagaggggaagggaggg 31664427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 442 - 478
Target Start/End: Complemental strand, 31932005 - 31931969
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggg 478  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31932005 tgtgtttggattgagggtttaagaggggaagggaggg 31931969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 603
Target Start/End: Original strand, 40463975 - 40464031
Alignment:
Q  547 ataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||| ||| ||||||||||||||| | ||||||| |||||||||||||||| |||||    
T  40463975 ataacatgataaacaatcatataaaaattcaatctcacttaatttattttagaaaaa 40464031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 625
Target Start/End: Original strand, 42699718 - 42699794
Alignment:
Q  549 aatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||| ||||  |||||||||||||||||  ||||||||||||||||  ||||| ||| ||||| |||| ||||||    
T  42699718 aatatgataaatgatcatataatacttcaaaaacacttaatttattttttaaaaatattttatattgttcgtaattt 42699794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 548 - 604
Target Start/End: Original strand, 54574466 - 54574522
Alignment:
Q  548 taatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaac 604  Q
    ||||||| |||||  | |||||||||||||||||| |||||||||||||| ||||||    
T  54574466 taatatgataaacggttatataatacttcaatcacgcttaatttattttagaaaaac 54574522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 625
Target Start/End: Complemental strand, 651852 - 651793
Alignment:
Q  566 tataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||| || ||||||||||||||||||||| ||||||||  ||||||||  |||||||    
T  651852 tataatattttaatcacacttaatttattttagaaaaacatgttatatagtctataattt 651793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 606
Target Start/End: Original strand, 10748417 - 10748460
Alignment:
Q  563 tcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||||||||  |||||||||||||||||||| ||||||||    
T  10748417 tcatataatacttttatcacacttaatttattttagaaaaacat 10748460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 607
Target Start/End: Original strand, 10943727 - 10943778
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||| ||| ||||||||||||||  ||||||||||||||||| |||||||||    
T  10943727 taaataattatataatacttcaaaaacacttaatttattttaaaaaaacatt 10943778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 507
Target Start/End: Original strand, 16883972 - 16884042
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    ||||||||||||||||  |||||||| || |||||||| ||||||||| ||| ||||| ||||||| |||||    
T  16883972 taagggtgtgtttggaaagagggttt-agtggggaaggaaggggagggcttacatttcttttttaatttaca 16884042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 17474453 - 17474382
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||| ||||||||||| ||||||| | |||||||||||||||||| ||| |  |||  ||||||||||||    
T  17474453 ttaaggatgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattac 17474382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 479
Target Start/End: Original strand, 24253719 - 24253762
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggagggg 479  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||    
T  24253719 taagggtgtgtttggattgagggtttaggagggaaagggagggg 24253762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 434 - 473
Target Start/End: Complemental strand, 36727423 - 36727384
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagg 473  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  36727423 attaaggatgtgtttggatggagggtttaagaagggaagg 36727384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 591
Target Start/End: Complemental strand, 37807211 - 37807176
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaattt 591  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37807211 taaacgatcatataatacttcaatcacacttaattt 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 40858690 - 40858627
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||||| || || |||| ||||||    
T  40858690 atcatataatacttcaaaaacactaaatttattttaaaaaaacattttacattgttcgtaattt 40858627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 617
Target Start/End: Original strand, 43005829 - 43005913
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagtt 617  Q
    ||||||| |||||||||  ||||| ||||  |||||||||||||||||||| | | ||||||||||| ||||| ||  |||||||||    
T  43005829 aaaaagttaacatatta--atatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaatatgttatatagtt 43005913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 616
Target Start/End: Complemental strand, 46556265 - 46556214
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||||||||||||||||| ||||||||||  ||||||||  ||||||||    
T  46556265 atataatacttcaatcacactcaatttattttggaaaaacatattatatagt 46556214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 48683737 - 48683674
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||| || || |||| ||||||    
T  48683737 atcatataatatttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaattt 48683674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 51819238 - 51819285
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    ||||| ||| |||||||||||||||||||| ||||||||||| |||||    
T  51819238 taaacgatcgtataatacttcaatcacactaaatttattttaaaaaaa 51819285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 442 - 476
Target Start/End: Original strand, 10748299 - 10748333
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggag 476  Q
    ||||||||||||||||||||| |||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggag 10748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 444 - 506
Target Start/End: Complemental strand, 10943852 - 10943790
Alignment:
Q  444 tgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||| |  ||| |||||||||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattac 10943790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 44412359 - 44412405
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagg 482  Q
    |||||||||||||| || ||||||||| ||||||||| |||||||||    
T  44412359 taagggtgtgtttgaattgagggtttaggaggggaagagaggggagg 44412405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 596
Target Start/End: Complemental strand, 49815546 - 49815512
Alignment:
Q  562 atcatataatacttcaatcacacttaatttatttt 596  Q
    ||||||||||||||||||||| |||||||||||||    
T  49815546 atcatataatacttcaatcacgcttaatttatttt 49815512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 607
Target Start/End: Original strand, 16884090 - 16884135
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    |||||||||||||||||  ||||||||||||||||| ||| |||||    
T  16884090 atcatataatacttcaaaaacacttaatttattttaaaaagacatt 16884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 607
Target Start/End: Complemental strand, 37237047 - 37237003
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||    
T  37237047 atcatttagtacttcaatcacacttaatttatttt-caaaaacatt 37237003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Complemental strand, 42772157 - 42772116
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  42772157 atcatataatacttcaaaaacacttaatttatttttcaaaaa 42772116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Complemental strand, 44412486 - 44412445
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||||||||||||||  ||||||||||||||||| |||||    
T  44412486 atcatataatacttcaaaaacacttaatttattttaaaaaaa 44412445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 510
Target Start/End: Original strand, 51819146 - 51819210
Alignment:
Q  445 gtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||| ||||||  |||||||| |||||| || ||||  |||||||||||||||||||||    
T  51819146 gtttggatggaaggtttagaaggggaagagagggg-ggatttatttttcatttttaaattacagac 51819210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 434 - 616
Target Start/End: Original strand, 30487302 - 30487478
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaa 533  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||||| ||||||||  |||| |||||||||         |||    
T  30487302 attaagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatg---tcttttaaa 30487397  T
Q  534 aagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||| |||||||  ||| ||| |||||||| |||||||||||||||||||||| |||||||||| ||||||||  ||||||||    
T  30487398 aagtcaacatat--taacatgataaacaataatataatacttcaatcacacttgatttattttataaaaacatgttatatagt 30487478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 434 - 602
Target Start/End: Original strand, 9721134 - 9721297
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaa 533  Q
    ||||||||||||||||||| || |||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||         |||    
T  9721134 attaagggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatg---ttttttaaa 9721230  T
Q  534 aagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaa 602  Q
    |||| |||||||  |||| || |||||||||||||||||||||||||||||| | |||| |||| ||||    
T  9721231 aagttaacatat--taatttgataaacaatcatataatacttcaatcacactaactttaatttaaaaaa 9721297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 434 - 597
Target Start/End: Original strand, 9719027 - 9719185
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaa 533  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||  ||||||||||||||||| ||||||||| ||||         |||    
T  9719027 attaagcgtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatg---ttttttaaa 9719123  T
Q  534 aagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttatttta 597  Q
    |||| |||||||  |||| || |||||||||||||||||||||||||||||| |||||| ||||    
T  9719124 aagttaacatat--taatttgataaacaatcatataatacttcaatcacactaaatttaattta 9719185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 436 - 625
Target Start/End: Complemental strand, 33236196 - 33236013
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||||||| ||||||||||| ||||| ||| |||| ||||||||| | |||  ||||||||||||||||| |||||||||||||          |||||    
T  33236196 taagggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat----ttttttaaaaa 33236101  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    || |||||||  ||| ||| |||||||||||||||| |||||||||  |||||||||||||| ||||||||  |||||||| | ||||||    
T  33236100 gttaacatat--taacatgataaacaatcatataattcttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaattt 33236013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 434 - 593
Target Start/End: Complemental strand, 1300868 - 1300714
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaa 533  Q
    ||||||||||||||||||||||||||||   ||  ||| |||||||||||||||  ||||||||||||||||| |||| ||||||||          |||    
T  1300868 attaagggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaat---attttataaa 1300772  T
Q  534 aagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttat 593  Q
    |||| |||||||  |||  || ||||||||||||||||||||||||||||||||||||||    
T  1300771 aagttaacatat--taacctgataaacaatcatataatacttcaatcacacttaatttat 1300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 439 - 521
Target Start/End: Complemental strand, 10818459 - 10818377
Alignment:
Q  439 gggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||| ||| ||||| |||||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatg 10818377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 14515715 - 14515648
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||||||| |||||||||||||||||    
T  14515715 agggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaatta 14515648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 443 - 625
Target Start/End: Original strand, 19278039 - 19278220
Alignment:
Q  443 gtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaaaca 542  Q
    |||||||||||||||||||| |||||||||| ||| ||| |||||  ||||||||||||||||| |||||||| ||||          |||||||  |||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaat---attttttaaaaagttgaca 19278135  T
Q  543 tat-ta-taatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||| || ||| ||| ||||| ||||||| |||||||||||| ||| ||||||||||| ||||||||  |||||||| | ||||||    
T  19278136 tatatattaacatgataaacgatcatatgatacttcaatcagactaaatttattttagaaaaacatgttatatagtccgtaattt 19278220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 14515471 - 14515541
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||   |||| ||||||||||||    
T  14515471 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattac 14515541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 31849113 - 31849182
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||    
T  31849113 gtgtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagac 31849182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 1390561 - 1390481
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    |||||||||||||| |||||||| |||||||| ||||| | || ||||  ||||||||||||||||| |||||||||||||    
T  1390561 ggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaat 1390481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 10818226 - 10818302
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||  |||||  |||| |||||||||||| ||||    
T  10818226 ttaagggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggaca 10818302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 606
Target Start/End: Original strand, 21606852 - 21607007
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    |||||||||||||||||||||||||||          |||||||||||||||  ||||||||||||||||| || |||||||||||         |||||    
T  21606852 taagggtgtgtttggatggagggttta----------ggaggggagggtttacttttcatttttaaattacggaaactatgaaatg---ttttataaaaa 21606938  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    || |||||||  ||| ||| ||||| ||| |||||||||||| |||||||| |||||||||| ||||||||    
T  21606939 gttaacatat--taacatgataaacgatcgtataatacttcagtcacactttatttattttagaaaaacat 21607007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 4097754 - 4097684
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagaca 511  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| |  |||| |||||||||||| ||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggaca 4097684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 521
Target Start/End: Original strand, 16737997 - 16738079
Alignment:
Q  439 gggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||||||||||||||| ||||| ||||||| | ||||  |||| |||||||||||  || |||||||||||    
T  16737997 gggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatg 16738079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 505
Target Start/End: Original strand, 665839 - 665907
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||||| |  ||||||||||||||||    
T  665839 taagggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaatta 665907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 435 - 480
Target Start/End: Complemental strand, 9051779 - 9051734
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggagggga 480  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  9051779 ttaagggtgtgtttggattgagggtttaagaggggaagggagggga 9051734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 504
Target Start/End: Complemental strand, 9719273 - 9719208
Alignment:
Q  439 gggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatt 504  Q
    |||||||||||||| ||||||||| ||||||||| |||||| |||||||| |||| ||||||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaatt 9719208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 34176576 - 34176497
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaat 520  Q
    ||||||||||||||||||||||| ||||| ||| |||  ||| |||||  ||||||||||||||||| |||||||||||||    
T  34176576 ggtgtgtttggatggagggtttatgaggg-aagagagatgagagtttagttttcatttttaaattacggacactatgaaat 34176497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 596
Target Start/End: Original strand, 4097602 - 4097665
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttatttt 596  Q
    ||||||| |||||||||  | ||| ||||| |||||||||||||||||||||||||||||||||||    
T  4097602 aaaaagttaacatatta--acatgataaacgatcatataatacttcaatcacacttaatttatttt 4097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 625
Target Start/End: Original strand, 5585304 - 5585484
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggttta-aatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaa 539  Q
    |||||||||||||||||||||| |||||||||| | || || |||||   |||| ||||||||||||  |||||||||||||         ||||||  |    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatg---ttttttaaaaaggta 5585400  T
Q  540 acatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    ||||||  ||| ||  ||||| || ||| |||| |||||||||||||||||||||||| ||||||||  |||||||| | ||||||    
T  5585401 acatat--taacataataaacgattatacaatatttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 5585484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 25741561 - 25741478
Alignment:
Q  531 aaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||| ||||||  |||||||| ||||| ||||||||| |||||| |||| |||||||||||||| ||||||||  ||||||||    
T  25741561 aaaaagttaacata--ataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacatgttatatagt 25741478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 2892707 - 2892764
Alignment:
Q  547 ataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaac 604  Q
    |||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  2892707 ataacatgataaacaatcatataatatttcaatcacactaaatttattttagaaaaac 2892764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 506
Target Start/End: Complemental strand, 19278278 - 19278214
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||| | |||| ||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttt-attttcttttttaaattac 19278214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 9298735 - 9298647
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggaggg-----tttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||     ||||  ||||| ||||||||||| |||| |||||||||    
T  9298735 agggtgtgtttggatgaaggggttaggaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatg 9298647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 616
Target Start/End: Original strand, 12811094 - 12811153
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||||  ||||||||    
T  12811094 taaacaatcatatc-tacttcaatcacacttaatttattttagaaaaacatattatatagt 12811153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 606
Target Start/End: Complemental strand, 13583844 - 13583800
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||    
T  13583844 atcatataatatttcaatcacacttaatttattttagaaaaacat 13583800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 483
Target Start/End: Original strand, 23090992 - 23091040
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggaggg 483  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||||    
T  23090992 ttaagggtgtgtttggattgaaggtttaggaggggaagggaggggaggg 23091040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 616
Target Start/End: Complemental strand, 31849241 - 31849181
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||| ||  ||||||||    
T  31849241 taaacaataatataatacttcaatcacacttgatttattttagaaaaatatgttatatagt 31849181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 565 - 616
Target Start/End: Complemental strand, 2893752 - 2893701
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    ||||||||| ||||||||||||||||||||||| ||||||||  ||||||||    
T  2893752 atataatacatcaatcacacttaatttattttagaaaaacatgttatatagt 2893701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 613
Target Start/End: Complemental strand, 26318430 - 26318379
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatat 613  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| |||||    
T  26318430 atcatataatacttcaaaaacacttaatttattttaaaaaaacattttatat 26318379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 434 - 468
Target Start/End: Complemental strand, 4097538 - 4097504
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggg 468  Q
    |||||||||||||||||||||||||||||||||||    
T  4097538 attaagggtgtgtttggatggagggtttaagaggg 4097504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 509
Target Start/End: Complemental strand, 16738242 - 16738169
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacaga 509  Q
    |||||||| ||||||||| ||||||||| || ||||||| ||||||| |||||  |||| |||||||||||||||    
T  16738242 ttaagggtttgtttggattgagggtttaggatgggaagg-aggggagagtttacttttcttttttaaattacaga 16738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 625
Target Start/End: Original strand, 30850016 - 30850094
Alignment:
Q  547 ataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagttcataattt 625  Q
    |||| ||| ||||| |||||||||||||||||| | ||| ||||| ||||| ||||||||  |||||| ||||||||||    
T  30850016 ataacatgataaacgatcatataatacttcaattatactaaatttgttttaaaaaaacatattatataattcataattt 30850094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 1390316 - 1390353
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaag 472  Q
    |||||||||||||||||||||||||||| |||||||||    
T  1390316 ttaagggtgtgtttggatggagggtttatgaggggaag 1390353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 23091195 - 23091158
Alignment:
Q  446 tttggatggagggtttaagaggggaagggaggggaggg 483  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggaggg 23091158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 595
Target Start/End: Complemental strand, 32926770 - 32926737
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattt 595  Q
    ||||||||||||||||||||||||||||||||||    
T  32926770 atcatataatacttcaatcacacttaatttattt 32926737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 510
Target Start/End: Complemental strand, 12811224 - 12811152
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||||| ||||||||| || |||||| |||||||||| |||  |||| | ||||||||| ||||    
T  12811224 agggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagac 12811152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 614
Target Start/End: Original strand, 16738115 - 16738167
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatata 614  Q
    |||||||||||||| ||| ||||||| ||||||||| ||||||||| ||||||    
T  16738115 atcatataatacttaaataacacttactttattttagaaaaacattttatata 16738167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 26318546 - 26318482
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    |||||||||||||||| ||||| ||||| ||||||||||| | ||||  |||| |||||||||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaatta 26318482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 521
Target Start/End: Original strand, 12811035 - 12811066
Alignment:
Q  490 tttcatttttaaattacagacactatgaaatg 521  Q
    ||||||||||||||||||||||||||||||||    
T  12811035 tttcatttttaaattacagacactatgaaatg 12811066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 477
Target Start/End: Original strand, 15323225 - 15323264
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggagg 477  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  15323225 agggtgtgtttggattgagggtttaggaggggaagggagg 15323264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 477
Target Start/End: Original strand, 15353364 - 15353403
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggagg 477  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  15353364 agggtgtgtttggattgagggtttaggaggggaagggagg 15353403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 657 - 691
Target Start/End: Complemental strand, 1300659 - 1300625
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaaga 691  Q
    |||||||||||| ||||||||||||||||||||||    
T  1300659 ccctcctaaaccctcaatccaaacacaccctaaga 1300625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 565 - 603
Target Start/End: Original strand, 5381305 - 5381343
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaa 603  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  5381305 atataatacttcaatcacgcttaatttattttaaaaaaa 5381343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 572 - 606
Target Start/End: Original strand, 6034201 - 6034235
Alignment:
Q  572 acttcaatcacacttaatttattttacaaaaacat 606  Q
    |||||||||||||||||||||||||| ||||||||    
T  6034201 acttcaatcacacttaatttattttagaaaaacat 6034235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 504
Target Start/End: Complemental strand, 9721381 - 9721315
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatt 504  Q
    |||||||||||| || ||||||||| || || ||| |||||| |||||||| |||| ||||||||||    
T  9721381 agggtgtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaatt 9721315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 509
Target Start/End: Complemental strand, 10293494 - 10293421
Alignment:
Q  435 ttaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacaga 509  Q
    |||||||||| |||||||| |||||||| |||| ||||||||||||| | |||  |||| |||| ||||||||||    
T  10293494 ttaagggtgt-tttggatgaagggtttaggaggagaagggaggggagagcttacttttctttttcaaattacaga 10293421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 565 - 607
Target Start/End: Complemental strand, 14515593 - 14515551
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaacatt 607  Q
    ||||||||||||| ||||||||||||||||||| | |||||||    
T  14515593 atataatacttcattcacacttaatttattttagagaaacatt 14515551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 596
Target Start/End: Complemental strand, 16509405 - 16509371
Alignment:
Q  562 atcatataatacttcaatcacacttaatttatttt 596  Q
    ||||||||||||||||||||||||| |||||||||    
T  16509405 atcatataatacttcaatcacacttgatttatttt 16509371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 507
Target Start/End: Complemental strand, 21607085 - 21607019
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    |||||||||||| ||||||||| ||||||||| |||  ||  ||||| ||||| |||||||||||||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattaca 21607019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 487
Target Start/End: Complemental strand, 30487546 - 30487500
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggttta 487  Q
    |||||||| ||| ||||||||| ||||||||||||| ||||||||||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggttta 30487500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 567 - 605
Target Start/End: Complemental strand, 33041590 - 33041552
Alignment:
Q  567 ataatacttcaatcacacttaatttattttacaaaaaca 605  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  33041590 ataacacttcaatcacacttaatttattttaaaaaaaca 33041552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 34176466 - 34176416
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||| ||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  34176466 taaacgatcgtataatactgcaatcacacttgatttattttagaaaaacat 34176416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 473
Target Start/End: Original strand, 4097233 - 4097270
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagg 473  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  4097233 taagggtgtgtttggattgagggtttaggaggggaagg 4097270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 606
Target Start/End: Original strand, 25468521 - 25468562
Alignment:
Q  565 atataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||||||||  ||||||||||||||||| ||||||||    
T  25468521 atataatacttcaaaaacacttaatttattttaaaaaaacat 25468562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 691
Target Start/End: Complemental strand, 31798947 - 31798914
Alignment:
Q  658 cctcctaaaccgtcaatccaaacacaccctaaga 691  Q
    ||||||||||| ||||||||||||||||||||||    
T  31798947 cctcctaaaccctcaatccaaacacaccctaaga 31798914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 33041473 - 33041542
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    |||||||||||| | ||||||| ||| |||| |||||||||  ||||  |||||||||||||||| ||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagac 33041542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 436 - 616
Target Start/End: Original strand, 16294 - 16469
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||||| ||||||||||||||||||| ||||| || |||||||||||||||  ||||||||||||||||   |||||||||||||         ||||     
T  16294 taagggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatg---ttttataaaac 16390  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    || |||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||    
T  16391 gttaacatat--taacatgataaacaatcatataatacttcaatcacacttaatttattttagacaaacatgttatatagt 16469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 60; Significance: 4e-25; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 438 - 606
Target Start/End: Original strand, 39186 - 39353
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggagggg-agggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaag 536  Q
    ||||||||||||||||||||||||| ||||||||  |||||| ||||||||  ||||||||||||||||| ||||||||||||||         ||||||    
T  39186 agggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatg---ttttttaaaaag 39282  T
Q  537 taaacatattataatatgttaaacaatcatataata---cttcaatcacacttaatttattttacaaaaacat 606  Q
    | |||||||  ||| ||| ||||  |||||||||||   ||||||||||||||||||||||||| ||||||||    
T  39283 ttaacatat--taacatgataaatgatcatataatacttcttcaatcacacttaatttattttagaaaaacat 39353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 434 - 506
Target Start/End: Complemental strand, 39438 - 39366
Alignment:
Q  434 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    ||||||||||||||||||| |||||||||  |||| ||||||||||||||||||  |||| ||||||||||||    
T  39438 attaagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattac 39366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 441 - 521
Target Start/End: Original strand, 3150 - 3230
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||| ||| ||||| |||||||||||||||||| |||||  |||| |||||||||||||||||||||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatg 3230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 436 - 616
Target Start/End: Complemental strand, 16196 - 16021
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaa 535  Q
    ||||| ||||||| ||| |||| |||| ||||||||||||||  || |||||  ||||||||||||||||| || | |||||||||         |||||    
T  16196 taaggttgtgtttcgatagaggatttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgtttttt---aaaaa 16100  T
Q  536 gtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacattgtatatagt 616  Q
    || |||||||||  |||||  ||||||| ||| |||||||||||||||| |||||| ||||| ||||||||  ||||||||    
T  16099 gttaacatatta--atatgaaaaacaattataaaatacttcaatcacacataattttttttaaaaaaacatgttatatagt 16021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 440 - 606
Target Start/End: Complemental strand, 15504 - 15344
Alignment:
Q  440 ggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatgnnnnnnnnnaaaaagtaa 539  Q
    ||||||||||||||||||||||| || |||||||||   |||| | ||  ||| ||||||||||||| ||||||||||| ||         |||| || |    
T  15504 ggtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggacactatgaa-tgtttttt---aaaaggtca 15409  T
Q  540 acatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacat 606  Q
    ||||||||  |  || ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  15408 acatatta--acgtgataaacaatcatataatacttcaaccacacttaatttattttagaaaaacat 15344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 521
Target Start/End: Complemental strand, 242456 - 242377
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagacactatgaaatg 521  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||  |||| |||||||||||| |||| ||| |||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 242377  T

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Target: scaffold0240 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 436 - 507
Target Start/End: Complemental strand, 17784 - 17715
Alignment:
Q  436 taagggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattaca 507  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  |||||||  |||| |||||||||||||    
T  17784 taagggtgtgtttggatggagggtttaggagtggaagggaggg--gggtttacttttcttttttaaattaca 17715  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 438 - 510
Target Start/End: Original strand, 6584 - 6656
Alignment:
Q  438 agggtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattacagac 510  Q
    ||||||||||||||| || | |||| |||| |||||||||||||||||||  |||| ||||||||||||||||    
T  6584 agggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagac 6656  T

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Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 597
Target Start/End: Complemental strand, 6715 - 6674
Alignment:
Q  556 taaacaatcatataatacttcaatcacacttaatttatttta 597  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  6715 taaacgatcatataatacttcaatcacactaaatttatttta 6674  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 506
Target Start/End: Original strand, 1175 - 1240
Alignment:
Q  441 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaattac 506  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||  |||| ||||||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattac 1240  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  442 tgtgtttggatggagggtttaagaggggaagggaggggagggtttaaatttcatttttaaatta 505  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||   ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 690
Target Start/End: Complemental strand, 184641 - 184608
Alignment:
Q  657 ccctcctaaaccgtcaatccaaacacaccctaag 690  Q
    |||||||||||| |||||||||||||||||||||    
T  184641 ccctcctaaaccctcaatccaaacacaccctaag 184608  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 614
Target Start/End: Original strand, 69326 - 69378
Alignment:
Q  562 atcatataatacttcaatcacacttaatttattttacaaaaacattgtatata 614  Q
    |||||||||||||||  |||| |||||||||||||| ||||||||| ||||||    
T  69326 atcatataatacttctgtcacccttaatttattttaaaaaaacattttatata 69378  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 433 - 467
Target Start/End: Complemental strand, 53122 - 53088
Alignment:
Q  433 tattaagggtgtgtttggatggagggtttaagagg 467  Q
    |||||||||||||||||||||||||||||| ||||    
T  53122 tattaagggtgtgtttggatggagggtttaggagg 53088  T

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