View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14435_low_42 (Length: 386)
Name: NF14435_low_42
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14435_low_42 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 322; Significance: 0; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 17 - 369
Target Start/End: Original strand, 3957178 - 3957531
Alignment:
| Q |
17 |
gaatctcaaaagactaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaatgt |
116 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3957178 |
gaatctcacaagactaagaaaattagacatacgattttgctcaaagcttgtggctctacccgagcttccttcatcagttgaaactctacttgttgaatgt |
3957277 |
T |
|
| Q |
117 |
gaatcattgaagactgtatttttcccttctgttgctcaacaattcaaggaaaacaa-gaaaaggattgagttctggaattgcttgaacttggatgaatgc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3957278 |
gaatcattgaagactgtatttttcccttctgttgctcaacaattcaaggaaaacaaagaaaaggattgagttctggaattgcttgaacttggatgaatgc |
3957377 |
T |
|
| Q |
216 |
tctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacattcagcggcactgttacatcatgctaaaagcaatgaaagca |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3957378 |
tctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacattcagcggcactgttacatcatgctaaaagcaatgaaagca |
3957477 |
T |
|
| Q |
316 |
atgttggttacaaagataaatttgattcttatcaagcagtgtatttgtatcctg |
369 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3957478 |
atgctgattacaaagataaatttgattcttatcaagcagtgtatttgtatcctg |
3957531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 17 - 369
Target Start/End: Complemental strand, 4023514 - 4023165
Alignment:
| Q |
17 |
gaatctcaaaagactaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaatgt |
116 |
Q |
| |
|
|||||| | ||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4023514 |
gaatcttacaagactaagaaaattagacatacgattttgctcaaagctcctggttctacccgagcttccttcatcagttgaaactctacttgttgaatgt |
4023415 |
T |
|
| Q |
117 |
gaatcattgaagactgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatgaat |
213 |
Q |
| |
|
|||| ||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4023414 |
agatcactgaagactgtattgttcccttcaacagtttctgaacaattcaaggaaaacaagaaaaggattgagttctggaattgctggaacttggatgaac |
4023315 |
T |
|
| Q |
214 |
gctctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacattcagcggcactgttacatcatgctaaaagcaatgaaag |
313 |
Q |
| |
|
|||||||||||||||||||||||| |||| || |||||||| |||||| |||||| ||||| | || ||||| |||| || | |||||| |
|
|
| T |
4023314 |
attctctcataaatattgggttgaatctgcaaatgaatttgataaagtttacatatcaacatttatcgacactggaacatgat------cacgttgaaag |
4023221 |
T |
|
| Q |
314 |
caatgttggttacaaagataaatttgattcttatcaagcagtgtatttgtatcctg |
369 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||||| | ||||||| |
|
|
| T |
4023220 |
ttatgttgattacaaagataactttgattcttatcaagcagtgtatgtttatcctg |
4023165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 369
Target Start/End: Original strand, 3921717 - 3922072
Alignment:
| Q |
17 |
gaatctcaaaagactaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaa--- |
113 |
Q |
| |
|
|||||| | ||||||||| |||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3921717 |
gaatcttacaagactaagaaaattatacatacgattttccaacaagcttctggttctacccgagcttccttcatcagttgaaagtctacttgttgacaac |
3921816 |
T |
|
| Q |
114 |
tgtgaatcattgaagactgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatg |
210 |
Q |
| |
|
||||||||| | ||||||||||| |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
3921817 |
tgtgaatcactaaagactgtattgttcccttcaacagttgctgaacaattcaaggaaaacaagaaaagggttgagttctggaattgcttcaacttggatg |
3921916 |
T |
|
| Q |
211 |
aatgctctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacattcagcggcactgttacatcatgctaaaagcaatga |
310 |
Q |
| |
|
|| ||||| |||||||||||||||||| |||| |||||||||||||||||| || ||| ||||| | | ||||| |||| ||| | | || ||| |
|
|
| T |
3921917 |
aactttctctgataaatattgggttgaatctgcaaatcaatttgatgaagtttacacatcaacatttatcaacactggaacatgatg-aatatgc--tga |
3922013 |
T |
|
| Q |
311 |
aagcaatgttggttacaaagataaatttgattcttatcaagcagtgtatttgtatcctg |
369 |
Q |
| |
|
||| |||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
3922014 |
aagttatgttgattacaaagataactttgattcttatcaagcagtgtatgtgtatcctg |
3922072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 26 - 369
Target Start/End: Complemental strand, 3985429 - 3985089
Alignment:
| Q |
26 |
aagactaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaatgtgaatcattg |
125 |
Q |
| |
|
||||||||| |||||||||||| | ||| || ||||| |||| ||||| |||||||| |||||| ||||||||||||||||||| |||| ||| || |
|
|
| T |
3985429 |
aagactaagaaaattagacataagcgattgctcggagcttctggctctacctgagcttccatcatcacttgaaactctacttgttgactgtgtgtcactg |
3985330 |
T |
|
| Q |
126 |
aagactgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatgaatgctctctca |
222 |
Q |
| |
|
||| |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||| |
|
|
| T |
3985329 |
aagtctgtatttttcccttcaacagttgctgaacaattaaaggaaaacaagaaaaggattgagttctggaattgcttcaaattggatgaacgttctctca |
3985230 |
T |
|
| Q |
223 |
taaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacattcagcggcactgttacatcatgctaaaagcaatgaaagcaatgttgg |
322 |
Q |
| |
|
||||||||||||||||| | || |||||||||||| |||||||||||| ||||| | || ||||| |||| || |||| ||||||| |||||| |
|
|
| T |
3985229 |
taaatattgggttgaatcttcaaatcaatttgatggagtttgcatatcaacatttatcgacactggaacatgat----aaag--ttgaaagctatgttga |
3985136 |
T |
|
| Q |
323 |
ttacaaagataaatttgattcttatcaagcagtgtatttgtatcctg |
369 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| | ||||||| |
|
|
| T |
3985135 |
ttacaaagatatccttgattcttatcaagcagtgtatgtatatcctg |
3985089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 17 - 276
Target Start/End: Complemental strand, 4000598 - 4000336
Alignment:
| Q |
17 |
gaatctcaaaagactaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaatgt |
116 |
Q |
| |
|
|||||| | ||||||||| |||||||||||||||| ||| | ||||||| |||| ||||| | |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4000598 |
gaatcttacaagactaagaaaattagacatacgatattgcttaaagcttctggctctacctgtgcttcctttatcagttgaaactctacttgttgaatgt |
4000499 |
T |
|
| Q |
117 |
gaatcattgaagactgtatttttcccttctg---ttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatgaat |
213 |
Q |
| |
|
|||| ||||||||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4000498 |
atatcactgaagactgtattgttcccttcaacaatttctgaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttcaacttggatgaac |
4000399 |
T |
|
| Q |
214 |
gctctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacatt |
276 |
Q |
| |
|
|||||| ||||||||||||| ||| || | |||||| | || ||||||||||||| ||||| |
|
|
| T |
4000398 |
attctctcgtaaatattgggttcaatatgaaaatcaatctaatcaagtttgcatatcaacatt |
4000336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 270
Target Start/End: Original strand, 3935081 - 3935324
Alignment:
| Q |
30 |
ctaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaatgtgaatcattgaaga |
129 |
Q |
| |
|
||||| ||| ||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||| |||||||||| | ||||| ||| ||||| |
|
|
| T |
3935081 |
ctaagaaaactagacatacgattttccaacaagcttctggctctacccgagctttcttcatcagttgaaattctacttgttcactgtgactcactgaagt |
3935180 |
T |
|
| Q |
130 |
ctgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatgaatgctctctcataaa |
226 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||| ||||| |
|
|
| T |
3935181 |
ctgtattgttcccttcaacagttgctgaacaattcaaggaaaacaagaaagaagttaagttctggaattgcttgaacttggatgagcgttctctgataaa |
3935280 |
T |
|
| Q |
227 |
tattgggttgaatgtgcagatcaatttgatgaagtttgcatatc |
270 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
3935281 |
tattgggttgaatctgcaaatcaatttgatgaagtttgcatatc |
3935324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 3816055 - 3815805
Alignment:
| Q |
17 |
gaatctcaaaagactaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaa--- |
113 |
Q |
| |
|
|||||| | ||||||||| ||| ||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
3816055 |
gaatcttacaagactaagaaaactagacatacgaggttgcttgaagcttgtggctttacccgagcttccttcatcagttgaaactctacttgttaaagat |
3815956 |
T |
|
| Q |
114 |
tgtgaatcattgaagactgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatg |
210 |
Q |
| |
|
| | ||| ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
3815955 |
tctttttcactgaagactgtattgttcccttcaacagttgctgaacaattcaaggaaaacaagaaaagtgttgagttctggaattgcgagaacttggatg |
3815856 |
T |
|
| Q |
211 |
aatgctctctcataaatattgggttgaatgtgcagatcaatttgatgaagt |
261 |
Q |
| |
|
|| | |||||||||||| ||||||||||||| || |||||||| ||||||| |
|
|
| T |
3815855 |
aaagttctctcataaatgttgggttgaatgttcaaatcaatttaatgaagt |
3815805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 261
Target Start/End: Complemental strand, 3808472 - 3808231
Alignment:
| Q |
26 |
aagactaagtaaattagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgtt-gaa--tgtgaatca |
122 |
Q |
| |
|
||||||||| ||||||||||||| | ||| ||||||| || | ||||||||||||||||||||||||||||||||||||||| | | ||| |||| |
|
|
| T |
3808472 |
aagactaagaaaattagacatacaaggttgcaaaaagcttctgtctctacccgagcttccttcatcagttgaaactctacttgttagcagctgtagatca |
3808373 |
T |
|
| Q |
123 |
ttgaagactgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatgaatgctctc |
219 |
Q |
| |
|
||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| | |||| |
|
|
| T |
3808372 |
ctgaagactgtattgttcccttcaacagttgctgaacaattcaaggaaaacaagaaaagtgttgagttctggcattgcaagaacttggatgaaagttctc |
3808273 |
T |
|
| Q |
220 |
tcataaatattgggttgaatgtgcagatcaatttgatgaagt |
261 |
Q |
| |
|
|||||||| ||||||||||||| || |||||||| ||||||| |
|
|
| T |
3808272 |
tcataaatgttgggttgaatgttcaaatcaatttaatgaagt |
3808231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 73 - 276
Target Start/End: Complemental strand, 4008300 - 4008094
Alignment:
| Q |
73 |
tacccgagcttccttcatcagttgaaactctacttgttgaatgtgaatcattgaagactgtatttttccctt---ctgttgctcaacaattcaaggaaaa |
169 |
Q |
| |
|
|||| |||||||| |||||| ||||||||||| | | ||||||||||||| |||||||||||| ||||||| | | | || |||| ||||||||||| |
|
|
| T |
4008300 |
taccagagcttccatcatcacttgaaactctattggctgaatgtgaatcactgaagactgtatggttccctttaacagcttctgaacagttcaaggaaaa |
4008201 |
T |
|
| Q |
170 |
caagaaaaggattgagttctggaattgcttgaacttggatgaatgctctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatat |
269 |
Q |
| |
|
|||||||||| || ||| |||||||| |||||| ||||| || | ||||| |||||||||| ||||||| | || |||||| | ||||||||||||||| |
|
|
| T |
4008200 |
caagaaaagggttctgttatggaattgtttgaacctggataaacgttctcttataaatattgagttgaatattcaaatcaatataatgaagtttgcatat |
4008101 |
T |
|
| Q |
270 |
cgacatt |
276 |
Q |
| |
|
| ||||| |
|
|
| T |
4008100 |
caacatt |
4008094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 3936839 - 3936950
Alignment:
| Q |
147 |
gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatgaatgctctctcataaatattgggttgaatgtgcaga |
246 |
Q |
| |
|
|||||| ||||||| ||||||||||| ||||| |||||||||||||||||| ||||||| | |||| |||||||||||||||||||||||||| || | |
|
|
| T |
3936839 |
gttgctgaacaattaaaggaaaacaa-aaaagagttgagttctggaattgctggaacttgattaaatgttctctcataaatattgggttgaatgttcaaa |
3936937 |
T |
|
| Q |
247 |
tcaatttgatgaa |
259 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
3936938 |
tcaatttaatgaa |
3936950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 276
Target Start/End: Complemental strand, 3800230 - 3800046
Alignment:
| Q |
95 |
tgaaactctacttgttgaatgtgaatcattgaagactgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctgg |
191 |
Q |
| |
|
|||||||||||||||| | | | | ||| |||| ||||||| |||||||| |||||| |||||| |||||||||||||||| |||| | || ||| |
|
|
| T |
3800230 |
tgaaactctacttgttcactataagtcactgaatgctgtattgttcccttcaacagttgctggacaattaaaggaaaacaagaaaatgattaacttttgg |
3800131 |
T |
|
| Q |
192 |
aattgcttgaacttggatgaatgctctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacatt |
276 |
Q |
| |
|
|||||||||||||| || ||| ||||||||| ||| | |||||||| | ||||| |||||||||||||||||||||| ||||| |
|
|
| T |
3800130 |
aattgcttgaactttgaagaactttctctcatacataattggttgaatctacagattaatttgatgaagtttgcatatcaacatt |
3800046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 276
Target Start/End: Complemental strand, 4217203 - 4217014
Alignment:
| Q |
95 |
tgaaactctacttgttgaatgtgaatcattgaagactgtatttttcccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctgg |
191 |
Q |
| |
|
|||||||||||||||| | | | | ||| |||| ||||||| |||||||| |||||| |||||| |||||||||||||||| |||| | || ||| |
|
|
| T |
4217203 |
tgaaactctacttgttcactataagtcactgaatgctgtattgttcccttcaacagttgctggacaattaaaggaaaacaagaaaatgattaacttttgg |
4217104 |
T |
|
| Q |
192 |
aattgcttgaa-----cttggatgaatgctctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacatt |
276 |
Q |
| |
|
||||||||||| ||| || ||| ||||||||| ||||| |||||||| | ||||| |||| ||||| ||||||||||| ||||| |
|
|
| T |
4217103 |
aattgcttgaattgaactttgaagaactttctctcatacatatttggttgaatctacagattaattagatgatgtttgcatatcaacatt |
4217014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 3935367 - 3935416
Alignment:
| Q |
316 |
atgttggttacaaagataaatttgattcttatcaagcagtgtatttgtat |
365 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||| ||||| ||||| |
|
|
| T |
3935367 |
atgttgattacaaagataactttgattcttatcaagcattgtatgtgtat |
3935416 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 4016681 - 4016597
Alignment:
| Q |
124 |
tgaagactgtatttttcccttctgttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttgga |
208 |
Q |
| |
|
|||||||||| || |||||||| ||||| ||||||||||||| |||| ||||||| ||| ||| |||||||||||| ||||| |
|
|
| T |
4016681 |
tgaagactgtgttgttcccttcaattgctgaacaattcaaggagaacaggaaaagggttgtgtttgcgaattgcttgaaattgga |
4016597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 3934978 - 3935018
Alignment:
| Q |
59 |
aaagcttgtggccctacccgagcttccttcatcagttgaaa |
99 |
Q |
| |
|
||||||| |||| |||||||||||||||| ||||||||||| |
|
|
| T |
3934978 |
aaagcttctggctctacccgagcttcctttatcagttgaaa |
3935018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 3999181 - 3999089
Alignment:
| Q |
184 |
agttctggaattgcttgaacttggatgaatgctctctcataaatattgggttgaatgtgcagatcaatttgatgaagtttgcatatcgacatt |
276 |
Q |
| |
|
|||| |||||||| |||||| ||||| || | |||| ||||||| ||| ||||||| | || |||||| | || ||||||||||||| ||||| |
|
|
| T |
3999181 |
agttatggaattgtttgaacctggataaacgttctcacataaatgttgagttgaatattcaaatcaatataataaagtttgcatatcaacatt |
3999089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 40 - 212
Target Start/End: Complemental strand, 13396261 - 13396086
Alignment:
| Q |
40 |
tagacatacgattttgatcaaagcttgtggccctacccgagcttccttcatcagttgaaactctacttgttgaatgtgaatcattgaagactgtattttt |
139 |
Q |
| |
|
||||||||| ||| || ||||||||| |||| |||| | ||||||||||||| ||||||||||| ||||||||||| | ||| ||||| ||||| | || |
|
|
| T |
13396261 |
tagacatacaattctgctcaaagcttctggctgtacctgtgcttccttcatcacttgaaactctaattgttgaatgtaagtcactgaagtctgtagtgtt |
13396162 |
T |
|
| Q |
140 |
cccttct---gttgctcaacaattcaaggaaaacaagaaaaggattgagttctggaattgcttgaacttggatgaa |
212 |
Q |
| |
|
|||||| ||| | |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
13396161 |
cccttcaaaagttaccgaacaattcaaggaaaacaagaaaaggatagagttttggaattgcttgaacttggatgaa |
13396086 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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