View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14435_low_7 (Length: 651)

Name: NF14435_low_7
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14435_low_7
NF14435_low_7
[»] chr5 (44 HSPs)
chr5 (240-463)||(35777155-35777379)
chr5 (80-245)||(35776485-35776650)
chr5 (540-632)||(35777912-35778003)
chr5 (456-538)||(35777789-35777871)
chr5 (34-93)||(30489135-30489194)
chr5 (34-93)||(15966685-15966744)
chr5 (34-115)||(36329122-36329203)
chr5 (34-94)||(9004985-9005045)
chr5 (34-94)||(36137053-36137113)
chr5 (34-93)||(7336894-7336953)
chr5 (34-93)||(18942025-18942084)
chr5 (34-93)||(34102114-34102173)
chr5 (34-93)||(34186397-34186456)
chr5 (34-93)||(37554386-37554445)
chr5 (34-115)||(14571025-14571106)
chr5 (34-115)||(39916302-39916383)
chr5 (34-94)||(14274172-14274232)
chr5 (34-86)||(35067961-35068013)
chr5 (31-115)||(37637286-37637370)
chr5 (38-93)||(1723289-1723344)
chr5 (34-93)||(15965995-15966054)
chr5 (34-93)||(21152630-21152689)
chr5 (34-93)||(21159765-21159824)
chr5 (34-93)||(21163572-21163631)
chr5 (34-93)||(22473977-22474036)
chr5 (34-93)||(37685009-37685068)
chr5 (34-93)||(38860842-38860901)
chr5 (34-93)||(40914155-40914214)
chr5 (34-93)||(43340454-43340513)
chr5 (34-93)||(43585537-43585596)
chr5 (34-93)||(20503272-20503327)
chr5 (34-120)||(32067954-32068040)
chr5 (34-100)||(36964272-36964338)
chr5 (38-115)||(14416423-14416500)
chr5 (34-83)||(26168237-26168286)
chr5 (34-115)||(27990374-27990455)
chr5 (34-115)||(37685012-37685093)
chr5 (34-115)||(11784302-11784384)
chr5 (34-94)||(12165322-12165382)
chr5 (34-94)||(14571050-14571110)
chr5 (34-86)||(24433581-24433633)
chr5 (34-86)||(31947492-31947544)
chr5 (38-94)||(34102121-34102177)
chr5 (34-86)||(35907874-35907926)
[»] chr8 (33 HSPs)
chr8 (34-119)||(20524179-20524264)
chr8 (34-100)||(13832040-13832106)
chr8 (34-126)||(42149168-42149260)
chr8 (34-121)||(44282307-44282394)
chr8 (34-120)||(5040080-5040166)
chr8 (34-94)||(34194598-34194658)
chr8 (34-94)||(34326287-34326347)
chr8 (42-114)||(35874483-35874555)
chr8 (34-86)||(44838820-44838872)
chr8 (34-93)||(27781923-27781982)
chr8 (34-93)||(35969701-35969760)
chr8 (34-93)||(37922851-37922910)
chr8 (34-93)||(38883988-38884047)
chr8 (34-93)||(40802242-40802301)
chr8 (34-93)||(41177997-41178056)
chr8 (34-93)||(42631821-42631880)
chr8 (34-93)||(43483974-43484033)
chr8 (40-122)||(29730697-29730779)
chr8 (34-115)||(3611811-3611892)
chr8 (34-93)||(8568859-8568918)
chr8 (34-93)||(26492351-26492410)
chr8 (34-93)||(32032991-32033050)
chr8 (34-93)||(34188360-34188419)
chr8 (34-93)||(34194602-34194661)
chr8 (34-93)||(35063502-35063561)
chr8 (34-93)||(39655459-39655518)
chr8 (34-93)||(42795137-42795196)
chr8 (35-93)||(24726078-24726136)
chr8 (40-89)||(26191817-26191866)
chr8 (34-94)||(7256925-7256985)
chr8 (34-94)||(19293058-19293118)
chr8 (34-94)||(29916173-29916233)
chr8 (38-94)||(40716784-40716840)
[»] chr2 (38 HSPs)
chr2 (38-94)||(29573852-29573908)
chr2 (34-125)||(921858-921949)
chr2 (34-94)||(42579057-42579117)
chr2 (34-93)||(5144310-5144369)
chr2 (34-93)||(5204931-5204990)
chr2 (34-93)||(34466137-34466196)
chr2 (34-94)||(9071243-9071303)
chr2 (34-93)||(10099591-10099650)
chr2 (34-93)||(26567678-26567737)
chr2 (34-93)||(30905163-30905222)
chr2 (34-93)||(32070503-32070562)
chr2 (38-137)||(32473466-32473565)
chr2 (35-93)||(9158017-9158075)
chr2 (34-120)||(31596809-31596895)
chr2 (58-136)||(42955099-42955177)
chr2 (34-115)||(10041559-10041640)
chr2 (34-94)||(8554709-8554769)
chr2 (34-94)||(32346116-32346175)
chr2 (34-86)||(37486045-37486097)
chr2 (34-81)||(324838-324885)
chr2 (38-93)||(2795356-2795411)
chr2 (34-93)||(4898207-4898266)
chr2 (34-93)||(4945601-4945660)
chr2 (34-93)||(9709700-9709759)
chr2 (34-93)||(17843993-17844052)
chr2 (34-93)||(24971247-24971306)
chr2 (34-93)||(33618236-33618295)
chr2 (34-93)||(40739531-40739590)
chr2 (34-93)||(43514798-43514857)
chr2 (38-136)||(42579065-42579163)
chr2 (34-115)||(8382840-8382921)
chr2 (34-115)||(40739534-40739615)
chr2 (34-94)||(2795348-2795408)
chr2 (30-94)||(11093568-11093632)
chr2 (34-94)||(24971243-24971303)
chr2 (34-94)||(29771756-29771816)
chr2 (34-86)||(34240866-34240917)
chr2 (34-86)||(45123841-45123893)
[»] chr4 (64 HSPs)
chr4 (34-93)||(17028275-17028334)
chr4 (34-94)||(13743896-13743956)
chr4 (34-94)||(40952577-40952637)
chr4 (34-93)||(11583746-11583805)
chr4 (34-93)||(26206636-26206695)
chr4 (34-93)||(30162650-30162709)
chr4 (34-93)||(48042630-48042689)
chr4 (34-100)||(44551230-44551296)
chr4 (34-91)||(49745505-49745562)
chr4 (71-138)||(2941766-2941834)
chr4 (38-90)||(5048481-5048533)
chr4 (34-90)||(16450201-16450257)
chr4 (42-114)||(24448683-24448755)
chr4 (34-94)||(53403033-53403093)
chr4 (34-93)||(4711448-4711507)
chr4 (34-93)||(33084756-33084815)
chr4 (34-93)||(41788960-41789019)
chr4 (31-94)||(43635874-43635937)
chr4 (34-93)||(44639785-44639844)
chr4 (34-93)||(48079558-48079617)
chr4 (34-120)||(34458997-34459083)
chr4 (34-92)||(53508540-53508598)
chr4 (34-92)||(53551637-53551695)
chr4 (34-115)||(33659814-33659895)
chr4 (34-115)||(42013163-42013244)
chr4 (38-126)||(11511714-11511802)
chr4 (34-86)||(19754257-19754309)
chr4 (34-86)||(19785497-19785549)
chr4 (34-94)||(24331467-24331527)
chr4 (34-94)||(25856048-25856108)
chr4 (34-86)||(43635878-43635930)
chr4 (43-115)||(46779345-46779417)
chr4 (34-93)||(17659504-17659563)
chr4 (34-93)||(23329412-23329471)
chr4 (34-93)||(23710874-23710933)
chr4 (34-93)||(24529615-24529674)
chr4 (34-93)||(29978531-29978590)
chr4 (34-93)||(32112356-32112415)
chr4 (34-93)||(39294212-39294271)
chr4 (34-93)||(39754141-39754200)
chr4 (38-93)||(45070880-45070935)
chr4 (38-93)||(46996520-46996575)
chr4 (34-93)||(50038492-50038551)
chr4 (34-93)||(50045714-50045773)
chr4 (34-93)||(51126147-51126206)
chr4 (34-93)||(54569395-54569454)
chr4 (34-93)||(55131578-55131637)
chr4 (34-93)||(55501244-55501303)
chr4 (37-115)||(19754232-19754310)
chr4 (37-115)||(19785496-19785574)
chr4 (34-136)||(20542799-20542901)
chr4 (60-94)||(49806396-49806430)
chr4 (42-103)||(21142140-21142201)
chr4 (28-137)||(42184675-42184784)
chr4 (36-93)||(56420475-56420532)
chr4 (34-86)||(9968343-9968395)
chr4 (34-94)||(11583749-11583809)
chr4 (42-110)||(31262616-31262684)
chr4 (34-90)||(36721788-36721844)
chr4 (42-94)||(36786188-36786240)
chr4 (38-90)||(46996516-46996568)
chr4 (34-94)||(50038488-50038548)
chr4 (34-94)||(50045710-50045770)
chr4 (34-94)||(54787024-54787084)
[»] chr3 (35 HSPs)
chr3 (34-121)||(23783311-23783398)
chr3 (33-100)||(38014836-38014903)
chr3 (34-136)||(47931732-47931833)
chr3 (37-94)||(43898131-43898188)
chr3 (34-94)||(7672731-7672791)
chr3 (34-94)||(8126168-8126228)
chr3 (34-94)||(13083913-13083973)
chr3 (37-93)||(18480915-18480971)
chr3 (34-94)||(29076567-29076627)
chr3 (34-93)||(16127787-16127846)
chr3 (34-93)||(32589357-32589416)
chr3 (34-100)||(39530437-39530503)
chr3 (34-100)||(40326470-40326536)
chr3 (34-115)||(26043267-26043348)
chr3 (34-94)||(7672735-7672795)
chr3 (34-86)||(32833722-32833774)
chr3 (34-93)||(1043965-1044024)
chr3 (34-93)||(19679004-19679063)
chr3 (34-93)||(21659177-21659236)
chr3 (34-93)||(22995735-22995794)
chr3 (34-93)||(32833719-32833778)
chr3 (34-93)||(40760813-40760872)
chr3 (39-94)||(42595784-42595839)
chr3 (34-93)||(44435216-44435275)
chr3 (40-115)||(46967474-46967549)
chr3 (34-93)||(51760211-51760270)
chr3 (34-93)||(54680531-54680590)
chr3 (34-83)||(23005057-23005106)
chr3 (40-93)||(29676254-29676307)
chr3 (34-94)||(14626670-14626730)
chr3 (34-94)||(34205605-34205665)
chr3 (34-122)||(40504076-40504164)
chr3 (38-94)||(51204521-51204577)
chr3 (77-129)||(51859133-51859185)
chr3 (34-94)||(52638075-52638135)
[»] scaffold0340 (1 HSPs)
scaffold0340 (34-94)||(14071-14131)
[»] chr7 (31 HSPs)
chr7 (35-115)||(24733132-24733212)
chr7 (34-93)||(19531992-19532051)
chr7 (34-93)||(46221120-46221179)
chr7 (34-93)||(46578307-46578366)
chr7 (28-93)||(11032339-11032404)
chr7 (34-94)||(27942363-27942423)
chr7 (34-93)||(3498336-3498395)
chr7 (37-120)||(9503941-9504024)
chr7 (34-93)||(37066224-37066283)
chr7 (34-93)||(46477175-46477234)
chr7 (38-87)||(12171705-12171754)
chr7 (34-115)||(33471532-33471613)
chr7 (34-115)||(35593658-35593739)
chr7 (34-94)||(12307855-12307915)
chr7 (34-94)||(45833232-45833292)
chr7 (34-94)||(47778471-47778531)
chr7 (34-93)||(24166305-24166364)
chr7 (34-93)||(48590624-48590683)
chr7 (71-104)||(29205340-29205373)
chr7 (34-115)||(31758525-31758606)
chr7 (34-115)||(33471507-33471588)
chr7 (34-115)||(35593683-35593764)
chr7 (34-94)||(6250642-6250702)
chr7 (34-94)||(21387618-21387678)
chr7 (34-82)||(31319558-31319606)
chr7 (34-94)||(32490627-32490687)
chr7 (34-94)||(39024105-39024165)
chr7 (34-94)||(39970199-39970259)
chr7 (34-94)||(46578303-46578363)
chr7 (34-94)||(46658774-46658834)
chr7 (34-94)||(48392904-48392964)
[»] chr1 (43 HSPs)
chr1 (34-94)||(6169848-6169908)
chr1 (34-93)||(50998346-50998405)
chr1 (28-115)||(52253574-52253661)
chr1 (42-115)||(26453030-26453103)
chr1 (34-93)||(12062236-12062295)
chr1 (34-93)||(21852479-21852538)
chr1 (34-93)||(24023407-24023466)
chr1 (34-93)||(24478707-24478766)
chr1 (74-136)||(47293180-47293242)
chr1 (34-115)||(38824308-38824389)
chr1 (34-95)||(39216145-39216206)
chr1 (34-115)||(45239008-45239089)
chr1 (34-86)||(12993566-12993618)
chr1 (38-86)||(17622809-17622857)
chr1 (34-86)||(21909887-21909939)
chr1 (38-90)||(23079398-23079449)
chr1 (34-86)||(33738209-33738261)
chr1 (34-94)||(37255164-37255224)
chr1 (34-93)||(1252173-1252232)
chr1 (34-93)||(4682979-4683038)
chr1 (34-93)||(15311511-15311570)
chr1 (34-93)||(17310457-17310516)
chr1 (34-93)||(27549084-27549143)
chr1 (34-93)||(31909788-31909847)
chr1 (38-93)||(40341769-40341824)
chr1 (71-106)||(43738684-43738719)
chr1 (34-93)||(48605109-48605168)
chr1 (34-91)||(1358213-1358270)
chr1 (34-83)||(5852730-5852779)
chr1 (34-83)||(6763383-6763432)
chr1 (34-83)||(46517994-46518043)
chr1 (34-87)||(47293292-47293345)
chr1 (34-95)||(52879926-52879987)
chr1 (34-94)||(6758584-6758644)
chr1 (34-94)||(12447496-12447556)
chr1 (34-86)||(21909883-21909935)
chr1 (38-94)||(26423470-26423526)
chr1 (34-122)||(34598904-34598992)
chr1 (34-94)||(38824333-38824393)
chr1 (28-92)||(39216143-39216207)
chr1 (34-94)||(40341772-40341832)
chr1 (38-90)||(41154950-41155002)
chr1 (34-93)||(42140371-42140428)
[»] chr6 (13 HSPs)
chr6 (34-93)||(667770-667829)
chr6 (34-93)||(32786158-32786217)
chr6 (34-136)||(31577435-31577537)
chr6 (34-86)||(3212283-3212335)
chr6 (34-93)||(14804207-14804264)
chr6 (34-94)||(29938388-29938448)
chr6 (34-93)||(3343816-3343875)
chr6 (34-93)||(3418795-3418854)
chr6 (34-93)||(21478595-21478654)
chr6 (34-93)||(31759366-31759425)
chr6 (34-94)||(6047994-6048054)
chr6 (34-94)||(21478591-21478651)
chr6 (34-86)||(33169224-33169276)
[»] scaffold0635 (1 HSPs)
scaffold0635 (34-115)||(5430-5511)
[»] scaffold0013 (1 HSPs)
scaffold0013 (34-131)||(58301-58398)
[»] scaffold0172 (1 HSPs)
scaffold0172 (34-93)||(11623-11682)
[»] scaffold0063 (1 HSPs)
scaffold0063 (35-125)||(54641-54731)
[»] scaffold0128 (1 HSPs)
scaffold0128 (34-90)||(44642-44698)


Alignment Details
Target: chr5 (Bit Score: 182; Significance: 5e-98; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 240 - 463
Target Start/End: Original strand, 35777155 - 35777379
Alignment:
Q  240 aaggataaaacactttaactgcactagcaagttaaaggnnnnnnnnncacactgcactatgcactaacagattgaagaaaaagaccttagctgctacaca 339  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  35777155 aaggataaaacactttaactgcactagcaagttaaaggaaaaaaaaacacactgcactatgcaccagcagattgaagaaaaagaccttagctgctacaca 35777254  T
Q  340 accaaaccaaacaagagaaagtaacgatccaagtgttcctactaaacctgccaaaatgcccccataataatttaaaaaataatttt-atttatgtcaagt 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35777255 accaaaccaaacaagagaaagtaacgatccaagtgttcctactaaacctgccaaaatgcccccataataatttaaaaaataattttcatttatgtcaagt 35777354  T
Q  439 atttattctccttgtaatatatttt 463  Q
    |||||||||||||||||||||||||    
T  35777355 atttattctccttgtaatatatttt 35777379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 80 - 245
Target Start/End: Original strand, 35776485 - 35776650
Alignment:
Q  80 attaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaagtactacaacttaatcatttaaaatagatatttttaatcaatggtc 179  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35776485 attaattaaatgaataaaaaatattacatttacttataattaacaatggaggaagtactactacttaatcatttaaaatagatatttttaatcaatggtc 35776584  T
Q  180 catggtacatattataaatataactccattcaatcacatggagtaacgacaacagagccaaaggat 245  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35776585 tatggtacatattataaatataactccattcaatcacatggagtaacgacaacagagccaaaggat 35776650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 540 - 632
Target Start/End: Original strand, 35777912 - 35778003
Alignment:
Q  540 ttagcaactagaaagcaaagagcttatcttttgcgggaagaataattctaaccaagtatgagtttcaagtgttgcctacttatgtgatcacac 632  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35777912 ttagcaactagaaagcaaagagcttatcttt-gcgggaagaataattctaaccaagtatgagtttcaagtgttgcctacttatgtgatcacac 35778003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 456 - 538
Target Start/End: Original strand, 35777789 - 35777871
Alignment:
Q  456 tatattttaatgcatgatttaattaataattataaagatatggatatgttttttgtgtaaaatattcattttatgtgtgttat 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35777789 tatattttaatgcatgatttaattaataattataaagatatggatatgttttttgtgtaaaatattcattttatgtgtgttat 35777871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 30489194 - 30489135
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||    
T  30489194 attcaattaatgatatatgtggtctatattatgaactatatacataattaattaaatgaa 30489135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 15966685 - 15966744
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||||||||||| | |||||||||||||| ||||||    
T  15966685 attcaattaatgatgtatgtggtttatattatggaccacatacatcattaattgaatgaa 15966744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 36329122 - 36329203
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||||||||| ||| |||||||| || | |||||||||||||| ||||||   |||| ||||||||| ||||    
T  36329122 attcaattaatgatatatgtggttcatattatgtaccacatacatcattaattgaatgaacttaaaaaattaaatttgctta 36329203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 9005045 - 9004985
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| || |||||  |||||||||| ||||| ||||||||||||||||||||||    
T  9005045 attcaattaataatgtatgtgatttatattatagactacatacatcattaattaaatgaat 9004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 36137113 - 36137053
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| |||||  |||| ||||||||||| |||||||||||||| |||||||    
T  36137113 attcaattaatgatgtatgtgatttaaattatggactacatacatcattaattgaatgaat 36137053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 7336953 - 7336894
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  7336953 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaa 7336894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 18942084 - 18942025
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| || ||||||||| || |||||||||||||||| ||||||    
T  18942084 attcaattaatgatgtatgtggtctatattatgaaccatatacatcattaattgaatgaa 18942025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 34102173 - 34102114
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| ||||||||| |||||||||||||| ||||||    
T  34102173 attcaattaatgatgtatgtggttcataatatggactacatacatcattaattcaatgaa 34102114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 34186397 - 34186456
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  34186397 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 34186456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 37554445 - 37554386
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||| || |||||||||||||||||| || | |||||||||||||| ||||||    
T  37554445 attcaattaataatgtatgtagtttatattatgaaccacatacatcattaattgaatgaa 37554386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 14571106 - 14571025
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| |||||||  |||| || |||||| ||||    
T  14571106 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaatctaaaaaataaaatttgctta 14571025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 39916383 - 39916302
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    ||||||||||| || ||||| ||||||| |||||| || |||||||| |||||||||||||  ||||  | |||||||||||    
T  39916383 attcaattaataatgtatgtggtttataatatggattacatacatcaataattaaatgaatctaaaaagtaaaatttactta 39916302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 14274232 - 14274172
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||| |||||||| ||||||||||||| ||||||| | |||||||||||| | |||||||    
T  14274232 attcatttaatgatgtatgtagtttataatatggaccacatacatcattaaatgaatgaat 14274172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 35067961 - 35068013
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| |||||||| ||||||||| || ||| ||||||||||||    
T  35067961 attcaattaatgatgtatgtagtctatattatgaaccatacacatcattaatt 35068013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 37637370 - 37637286
Alignment:
Q  31 ttgattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| || ||||||||||||||||||    | |||||||||||||| ||||||   |||| || |||||||||||    
T  37637370 ttgattcaattaataatgtatgtagtttatattatgagtcacatacatcattaattgaatgaacttaaaaaataaaatttactta 37637286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 1723289 - 1723344
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||| ||||| |||||||||||| || ||||| |||||||||| ||||||    
T  1723289 aattaatgatgtatgtggtttatattatgaaccatatatatcattaattgaatgaa 1723344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 15966054 - 15965995
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||| ||| | |||||||||||||| ||||||    
T  15966054 attcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaa 15965995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 21152630 - 21152689
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  |||||| ||||||| | |||||||||||||| ||||||    
T  21152630 attcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaa 21152689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 21159765 - 21159824
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  |||||| ||||||| | |||||||||||||| ||||||    
T  21159765 attcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaa 21159824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 21163572 - 21163631
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  |||||| ||||||| | |||||||||||||| ||||||    
T  21163572 attcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaa 21163631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 22474036 - 22473977
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||| |||||||| ||||| ||||||| |||||||||  ||||||||||| ||||||||    
T  22474036 attcatttaatgatgtatgttgtttataatatggactacgtacatcattaaataaatgaa 22473977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 37685068 - 37685009
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||| || |||||||| ||||||||| || | |||||||||||||| ||||||    
T  37685068 attcaattaataatgtatgtagtctatattatgaaccacatacatcattaattgaatgaa 37685009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 38860842 - 38860901
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| ||||||    
T  38860842 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaa 38860901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 40914155 - 40914214
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||| ||||| |||||||| ||||||| ||||||| | |||||||||||| ||||||||    
T  40914155 attcatttaattatatatgtggtttataatatggaccacatacatcattaaataaatgaa 40914214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 43340513 - 43340454
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||| || ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  43340513 attcaattaataatttatgtggtttataatatggaccacatacatcattaattgaatgaa 43340454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 43585537 - 43585596
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| |||||||| || | |||||||||||||| ||||||    
T  43585537 attcaattaatgatgtatgtggttcatattatgaaccacatacatcattaattgaatgaa 43585596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 20503327 - 20503272
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||||||||||||    |||| |||||||||||||| ||||||    
T  20503327 attcaattaatgatgtatgtagtttatatt----actacatacatcattaattgaatgaa 20503272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 32067954 - 32068040
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaatt 120  Q
    |||||||||||||| ||||| ||| ||||||||||| |  | ||||||||||| |||||||  ||||  |||||||| |||| ||||    
T  32067954 attcaattaatgatgtatgtggttcatattatggaccacgttcatcattaattgaatgaatttaaaaagttaaatttgcttataatt 32068040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 36964272 - 36964338
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaa 100  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||| ||||| ||||||| |||||    
T  36964272 attcaattaatgatgtatgtggttcatattatagaccacatacatcactaattgaatgaatcaaaaa 36964338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 14416500 - 14416423
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||| |||||  |||||| ||||||| | |||||||||||||| |||||||  |||| || |||||| ||||    
T  14416500 aattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaatctaaaaaataaaatttgctta 14416423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 26168286 - 26168237
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcatta 83  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||    
T  26168286 attcaattaatgatgtatgtggtttataatatggaccacatacatcatta 26168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 27990455 - 27990374
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| |||||| | |||| |||| || | |||||||||||||| || |||   |||| ||||||||||||||    
T  27990455 attcaattaatgatgtatgtaatctataatatgaaccaaatacatcattaattgaaagaacttaaaaaattaaatttactta 27990374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 37685012 - 37685093
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||| ||| ||| ||||| |||||| ||||||| |||||||  |||| || |||||| ||||    
T  37685012 attcaattaatgatgtatgtggttcataatatagactacatacattattaattgaatgaatctaaaaaataaaatttgctta 37685093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 11784384 - 11784302
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa--taaaaaatattaaatttactta 115  Q
    |||||||||||||| |||||  | ||||||||| |||| |||||| ||||||| ||||||  ||||||| || |||||||||||    
T  11784384 attcaattaatgatgtatgtgatgtatattatgaactacatacattattaattgaatgaacctaaaaaa-ataaaatttactta 11784302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 12165382 - 12165322
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||| |  ||||||||||  || | ||||||||||||||||||||||    
T  12165382 attcaattaatgatgtatatgatttatattatataccacatacatcattaattaaatgaat 12165322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 14571050 - 14571110
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||  |||||||| || | |||||||||||||| |||||||    
T  14571050 attcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaat 14571110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 24433633 - 24433581
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||| ||| ||||||| | ||||||||||||||    
T  24433633 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt 24433581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 31947492 - 31947544
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    ||||||||||| || ||||| ||| ||||||||||  ||||||||||||||||    
T  31947492 attcaattaattatgtatgtggttcatattatggatcatatacatcattaatt 31947544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 34102121 - 34102177
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||| ||||||||  |||||||| || | |||||||||||||| |||||||    
T  34102121 aattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaatgaat 34102177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 35907874 - 35907926
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||| |  | |||||||||||| ||||||||||||||||    
T  35907874 attcaattaatgatgtatatgatctatattatggaccatatacatcattaatt 35907926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 7e-17; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 20524264 - 20524179
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaat 119  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||| ||||||| |||||||  |||| ||||| |||||| |||||    
T  20524264 attcaattaatgatatatgtggtttataatatggaccatatacattattaattgaatgaatctaaaaaattaattttactaacaat 20524179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 13832106 - 13832040
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaa 100  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||||||| ||||||| |||||    
T  13832106 attcaattaatgatatatgtggttcatattatggaccacatacatcattaattgaatgaatcaaaaa 13832040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 42149168 - 42149260
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaat 126  Q
    |||||||||||||| |||||  |||||||||  ||| |||||||||||||||| |||||| | |||| || |||||| |||| ||||||||||    
T  42149168 attcaattaatgatgtatgtgatttatattagagaccatatacatcattaattgaatgaacataaaaaatgaaatttgcttataattgacaat 42149260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 44282307 - 44282394
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattg 121  Q
    |||||||||||||| ||||| ||| ||||| ||||| | |||||||||||||| |||||||  |||| ||||||||| |||| |||||    
T  44282307 attcaattaatgatgtatgtggttcatattgtggaccacatacatcattaattgaatgaatctaaaaaattaaatttgcttataattg 44282394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 5040166 - 5040080
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaatt 120  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| |||||||  ||||| | ||||||||||| ||||    
T  5040166 attcaattaatgatgtatgttgttcataatatggaccacatacatcattaattgaatgaatctaaaatgtcaaatttacttataatt 5040080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 34194658 - 34194598
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||||||| ||| ||||||| | |||||||||||||| |||||||    
T  34194658 attcaattaatgatgtatgtagttcataatatggaccacatacatcattaattgaatgaat 34194598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 34326287 - 34326347
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||||||| ||  |||||||||||||||||||| |||||||    
T  34326287 attcaattaatgatgtatgttgtttataataaagactatatacatcattaattgaatgaat 34326347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 35874555 - 35874483
Alignment:
Q  42 aatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactt 114  Q
    |||||| |||||  |||||| ||  ||||||||||||||||||||||||||||| ||||||| || |||||||    
T  35874555 aatgatgtatgtgatttataataaagactatatacatcattaattaaatgaatataaaatataaattttactt 35874483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 44838872 - 44838820
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||||||||| ||| ||||||||||| | ||||||||||||||    
T  44838872 attcaattaatgatatatgtggttcatattatggaccacatacatcattaatt 44838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 27781982 - 27781923
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  27781982 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaa 27781923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 35969760 - 35969701
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||| || |||||||||||||||||  || |||||||||||||||| ||||||    
T  35969760 attcaattaataatgtatgtagtttatattataaaccatatacatcattaattgaatgaa 35969701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 37922910 - 37922851
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  37922910 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 37922851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 38883988 - 38884047
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  38883988 attcaattaatgatgtatgtggtttataatatggacaacatacatcattaattgaatgaa 38884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 40802301 - 40802242
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  40802301 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 40802242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 41178056 - 41177997
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||||||  |||| ||||||||||||||| | |||||||||||||| ||||||    
T  41178056 attcaattaatgatgcatgtggtttatattatggaccacatacatcattaattgaatgaa 41177997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 42631821 - 42631880
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  42631821 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaa 42631880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 43483974 - 43484033
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  43483974 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 43484033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 29730779 - 29730697
Alignment:
Q  40 ttaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattga 122  Q
    |||||||| || || ||| ||| ||||||| | ||||||||||||||||||||||  |||| ||||||||| |||| ||||||    
T  29730779 ttaatgatgtacgtggttcataatatggaccacatacatcattaattaaatgaatccaaaaaattaaatttgcttataattga 29730697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 3611811 - 3611892
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| ||||||  ||||| || || ||||||||    
T  3611811 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaaccaaaaaaatcaattttactta 3611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 8568918 - 8568859
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| ||||||    
T  8568918 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaa 8568859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 26492351 - 26492410
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| ||||||    
T  26492351 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaattcaatgaa 26492410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32032991 - 32033050
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||  | |||||| ||||||||||||||    
T  32032991 attcaattaatgatgtatgtggttcatattatggatcaaatacattattaattaaatgaa 32033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 34188360 - 34188419
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  || ||||||||||| | |||||||||||||| ||||||    
T  34188360 attcaattaatgatgtatgttattcatattatggaccacatacatcattaattgaatgaa 34188419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 34194602 - 34194661
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||  |||||||| |||| |||||||||||||| ||||||    
T  34194602 attcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaatgaa 34194661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 35063502 - 35063561
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| || |||| |||| || | |||||||||||||||||||||    
T  35063502 attcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattaaatgaa 35063561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 39655459 - 39655518
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||  ||||||||||| | |||||||||||||| ||||||    
T  39655459 attcaattaatgatgtatgtggtccatattatggaccacatacatcattaattgaatgaa 39655518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 42795137 - 42795196
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  | |||||||||||  |||||||||||||||| ||||||    
T  42795137 attcaattaatgatgtatgtgatctatattatggaacatatacatcattaattgaatgaa 42795196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 24726078 - 24726136
Alignment:
Q  35 ttcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||||||||||| ||||||| |||||||   || ||||||||||| ||||||    
T  24726078 ttcaattaatgatatatgtggtttataatatggaccgcatccatcattaattgaatgaa 24726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 26191817 - 26191866
Alignment:
Q  40 ttaatgatatatgtagtttatattatggactatatacatcattaattaaa 89  Q
    |||||||||||||||||| |||||||| || | |||||||||||| ||||    
T  26191817 ttaatgatatatgtagttcatattatgaaccacatacatcattaaataaa 26191866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 7256985 - 7256925
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||| ||||||| |||||||    
T  7256985 attcaattaatgatgtatgtcgttcataatatggaccacatacattattaattgaatgaat 7256925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 19293058 - 19293118
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||| |||||| ||||| ||||||||||| ||| | |||||||||| ||| |||||||    
T  19293058 attcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaat 19293118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 29916173 - 29916233
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| |||||||| |||| ||| ||  ||||||||||| |||| |||||||    
T  29916173 attcaattaatgatgtatgtagtctataatatagatcatatacatcatcaattgaatgaat 29916233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 40716840 - 40716784
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||| ||||| ||||||| |||| || | |||||||||||||| |||||||    
T  40716840 aattaatgatgtatgtggtttataatatgtaccacatacatcattaattgaatgaat 40716784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 29573908 - 29573852
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  29573908 aattaatgatgtatgtggtttatattatggactatatacatcattaatttaatgaat 29573852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 921858 - 921949
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaa 125  Q
    |||||||||||||| |||||  | |||||||||||||| |||||||||||||| ||||||   |||| || ||||||||||| |||||||||    
T  921858 attcaattaatgatgtatgtgatctatattatggactagatacatcattaattgaatgaacttaaaaaatcaaatttacttataattgacaa 921949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 42579117 - 42579057
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  42579117 attcaattaatgatgtatgtggttcataatatggactacatacatcattaattaaatgaat 42579057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 5144310 - 5144369
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||||||||||    
T  5144310 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaa 5144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 5204990 - 5204931
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||||||||||    
T  5204990 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattaaatgaa 5204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 34466196 - 34466137
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||||| |||||||||||||| ||||||    
T  34466196 attcaattaatgatgtatgtggttcatattatggactacatacatcattaattgaatgaa 34466137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 9071303 - 9071243
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| || ||||| ||||||||||| ||||| |||||||||||||| |||||||    
T  9071303 attcaattaataatgtatgtggtttatattatagactacatacatcattaattgaatgaat 9071243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 10099650 - 10099591
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| || ||||||||  || | |||||||||||||||||||||    
T  10099650 attcaattaatgatatatgtggtctatattataaaccacatacatcattaattaaatgaa 10099591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 26567678 - 26567737
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||||| |||||||| ||||| ||||||    
T  26567678 attcaattaatgatgtatgtggtttataatatggactacatacatcaataattgaatgaa 26567737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 30905222 - 30905163
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||| ||||||||||||    
T  30905222 attcaattaatgatgtatgtggtttataatatggaccacatacatcaataattaaatgaa 30905163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32070503 - 32070562
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  32070503 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 32070562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 32473565 - 32473466
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaagtac 137  Q
    |||||||||||||||| || ||||||||| || | |||||||||||||| |||||||  |||| || |||||| |||| | || | |||||||| |||||    
T  32473565 aattaatgatatatgtggtctatattatgaaccacatacatcattaattgaatgaatctaaaaaataaaatttgcttatatttaaaaatggagggagtac 32473466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 9158017 - 9158075
Alignment:
Q  35 ttcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||||| ||||| ||| ||| ||||||||||||||||| |||||| ||||||    
T  9158017 ttcaattaatgatgtatgtggttcataatatggactatatacatcgttaattgaatgaa 9158075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 31596895 - 31596809
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaatt 120  Q
    ||||| |||| ||| ||||| ||| ||| ||||||  | |||||||||||||| |||||||| |||| |||||||||||||| ||||    
T  31596895 attcatttaacgatgtatgtcgttcataatatggatcacatacatcattaattgaatgaatataaaaaattaaatttacttataatt 31596809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 42955099 - 42955177
Alignment:
Q  58 tatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaagta 136  Q
    |||||||||||  |||||||||||||||| ||| |||  ||||| | ||| || |||| ||||||||||||||||||||    
T  42955099 tatattatggatcatatacatcattaattgaataaatctaaaatgtcaaaattgcttataattgacaatggaggaagta 42955177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 10041640 - 10041559
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| || ||||||||  || | ||||||||||||||||||||||  ||||| | |||||| ||||    
T  10041640 attcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgtaaaattttctta 10041559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 8554769 - 8554709
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||| ||||||| | ||| ||||||||||||||||||    
T  8554769 attcaattaatgatgtatgtggttcataatatggaccacatatatcattaattaaatgaat 8554709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 32346175 - 32346116
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| || ||| || |||||||||||||| |||||||||||||||| |||||||    
T  32346175 attcaattaataatgtatataatttatattatggac-atatacatcattaattgaatgaat 32346116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 37486097 - 37486045
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||| ||||||||||| | ||||||||||||||    
T  37486097 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 37486045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 324838 - 324885
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcat 81  Q
    |||||||||||||| ||||||||||||| ||||||| | |||||||||    
T  324838 attcaattaatgatgtatgtagtttataatatggaccacatacatcat 324885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 2795356 - 2795411
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  2795356 aattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 2795411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 4898207 - 4898266
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  |||||| ||||||| | |||||||||||||| ||||||    
T  4898207 attcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaa 4898266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 4945601 - 4945660
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  |||||| ||||||| | |||||||||||||| ||||||    
T  4945601 attcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaa 4945660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 9709700 - 9709759
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | ||||||||||| || ||||||    
T  9709700 attcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgaa 9709759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 17843993 - 17844052
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||| | ||||||| ||||||| | |||||||||||||| ||||||    
T  17843993 attcaattaatgatgtatatggtttataatatggaccacatacatcattaattgaatgaa 17844052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 24971247 - 24971306
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||| ||||||| ||||| ||  ||||||||||||| |||||||||||||| ||||||    
T  24971247 attcaactaatgatgtatgtggtccatattatggactacatacatcattaattgaatgaa 24971306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 33618295 - 33618236
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||| |||||||| |||||||| ||||||||| || |||||||||||||| | ||||||    
T  33618295 attcatttaatgatgtatgtagtctatattatgaaccatatacatcattaaatgaatgaa 33618236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 40739590 - 40739531
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | ||| |||||||||| ||||||    
T  40739590 attcaattaatgatgtatgtggttcatattatggaccacatatatcattaattgaatgaa 40739531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 43514798 - 43514857
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| ||| ||| |||||||||||||||| ||||||    
T  43514798 attcaattaatgatgtatgtggttcataatatagaccatatacatcattaattgaatgaa 43514857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 42579065 - 42579163
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaagta 136  Q
    |||||||||| ||||||||  |||||||| || | |||||||||||||| |||||||  ||||  | ||||||||||| | || | |||||||| ||||    
T  42579065 aattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaatgaatctaaaaagtaaaatttacttatatttaaaaatggagggagta 42579163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 8382840 - 8382921
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||  ||||| |||||||||||| || ||||| || ||||||| ||||||   |||| || |||||||||||    
T  8382840 attcaattaatgacgtatgtggtttatattatgaaccatatatattattaattgaatgaacctaaaaaataaaatttactta 8382921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 40739534 - 40739615
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||||||||| ||  ||| |||| || | |||||||||||||| ||||||   |||| || |||||||||||    
T  40739534 attcaattaatgatatatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaaaatcaaatttactta 40739615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 2795408 - 2795348
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||  ||| |||| || | ||||||||||||||||||||||    
T  2795408 attcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattaaatgaat 2795348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 11093568 - 11093632
Alignment:
Q  30 attgattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||| | |||||| ||||| || |||| ||  |||||||||||| |||||||||||||||    
T  11093568 attgattcattaaatgatgtatgtggtctataataaagactatatacataattaattaaatgaat 11093632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 24971303 - 24971243
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||||||  ||| ||||||| | ||||||||||| || |||||||    
T  24971303 attcaattaatgatgtatgtagtccataatatggaccacatacatcattagttgaatgaat 24971243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 29771816 - 29771756
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||| ||||||  | |||||||||||||| |||||||    
T  29771816 attcaattaatgatgtatgtggttcataatatggatcacatacatcattaattgaatgaat 29771756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 34240866 - 34240917
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||| ||||||||||| | ||||||||||||||    
T  34240866 attcaattaatgat-tatgtggttcatattatggaccacatacatcattaatt 34240917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 45123893 - 45123841
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    ||||||||||| || ||||| ||||||| ||||||||| |||||||| |||||    
T  45123893 attcaattaataatgtatgtggtttataatatggactacatacatcaataatt 45123841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 17028275 - 17028334
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||    
T  17028275 attcaattaatgatatatgtagtttataatatggaccacatacatcattaattgaatgaa 17028334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 13743956 - 13743896
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||||||| ||||||| | ||||||||||||||||||||||    
T  13743956 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaat 13743896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 40952637 - 40952577
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| || ||||||||||||||||| ||||| |||||||||||||| |||||||    
T  40952637 attcaattaataatgtatgtagtttatattatagactacatacatcattaattgaatgaat 40952577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 11583805 - 11583746
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||||||| ||||||||||| | |||||||||||||| ||||||    
T  11583805 attcaattaatgatgtatgtagttcatattatggaccacatacatcattaattgaatgaa 11583746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 26206636 - 26206695
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| ||| ||| ||||||| | |||||||||||||||||||||    
T  26206636 attcaattaatgatatatgtggttcataatatggaccacatacatcattaattaaatgaa 26206695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 30162709 - 30162650
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  30162709 attcaattaatgatatatgtggttcatattatggaccacatacatcattaattgaatgaa 30162650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 48042689 - 48042630
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||||||| ||||||| ||| | |||||||||||||||||||||    
T  48042689 attcaattaatgatgtatgtagttcatattatagaccacatacatcattaattaaatgaa 48042630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 44551296 - 44551230
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaa 100  Q
    |||||||||||||| ||| |  |||||||||||||| |||||||||||||||| |||||||| ||||    
T  44551296 attcaattaatgatgtatatgatttatattatggaccatatacatcattaattcaatgaatataaaa 44551230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 49745505 - 49745562
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatg 91  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||||||||    
T  49745505 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatg 49745562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 2941766 - 2941834
Alignment:
Q  71 atatacatcattaattaaatgaataaaaaatattaaa-tttacttacaattgacaatggaggaagtact 138  Q
    ||||||||||||||||| ||||||  |||| |||||| |||| ||| ||||||||||||||||||||||    
T  2941766 atatacatcattaattacatgaatttaaaaaattaaaatttaattataattgacaatggaggaagtact 2941834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 5048481 - 5048533
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaat 90  Q
    |||||||||||||||||||||||| ||||||| | | ||||||||||||||||    
T  5048481 aattaatgatatatgtagtttataatatggaccacacacatcattaattaaat 5048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 16450257 - 16450201
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaat 90  Q
    |||||||||||||||||||| ||||||||||||||  | || |||||||||||||||    
T  16450257 attcaattaatgatatatgtggtttatattatggatcacatgcatcattaattaaat 16450201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 24448755 - 24448683
Alignment:
Q  42 aatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactt 114  Q
    |||||| |||||  |||||| ||  ||||||||||||||||||||||||||||| ||||||| || |||||||    
T  24448755 aatgatgtatgtgatttataataaagactatatacatcattaattaaatgaatataaaatataaattttactt 24448683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 53403033 - 53403093
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||||||||||||||  |  |||||||||||||||||||||    
T  53403033 attcaattaatgatgtatgtggtttatattatggatcacgtacatcattaattaaatgaat 53403093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 4711448 - 4711507
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||| ||||||||||||||||    
T  4711448 attcaattaatgatttatgtggttcatattatggaccacatacttcattaattaaatgaa 4711507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 33084815 - 33084756
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||| | ||| ||||||||||| | |||||||||||||| ||||||    
T  33084815 attcaattaatgatatatctggttcatattatggaccacatacatcattaattgaatgaa 33084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 41789019 - 41788960
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  41789019 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 41788960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 43635937 - 43635874
Alignment:
Q  31 ttgattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||||||||| ||||||||| ||| |||| || | |||||||||||||| |||||||    
T  43635937 ttgattcaattaatgatgtatgtagttcataatatgaaccacatacatcattaattgaatgaat 43635874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 44639844 - 44639785
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  44639844 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 44639785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 48079558 - 48079617
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||||| |||||||| ||||| ||||||    
T  48079558 attcaattaatgatgtatgtggtttataatatggactacatacatcaataattgaatgaa 48079617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 34459083 - 34458997
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaatt 120  Q
    |||||||||||||||||||| ||| |||| |||||| ||||||||  |||||| ||||||   |||| || ||||||||||| ||||    
T  34459083 attcaattaatgatatatgtggttcatataatggaccatatacatgtttaattgaatgaacctaaaaaatcaaatttacttataatt 34458997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 53508598 - 53508540
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatga 92  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| |||||    
T  53508598 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatga 53508540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 53551637 - 53551695
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatga 92  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| |||||    
T  53551637 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatga 53551695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 33659814 - 33659895
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| |||||||| ||||||||| || | |||||||||||||| ||| ||   |||| || |||||||||||    
T  33659814 attcaattaatgatgtatgtagtatatattatgaaccacatacatcattaattgaataaacctaaaaaataaaatttactta 33659895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 42013244 - 42013163
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||||||| ||| ||| | |||||||||||||| |||||||  ||||  | |||||||||||    
T  42013244 attcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaatttaaaaagtaaaatttactta 42013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 11511714 - 11511802
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaat 126  Q
    |||||||||| ||| | ||||||||| ||||| | |||||||||||||||||||||   ||||  |||||||| |||| ||||| ||||    
T  11511714 aattaatgatgtatatggtttatattgtggaccacatacatcattaattaaatgaacctaaaaagttaaatttgcttataattggcaat 11511802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 19754257 - 19754309
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||||||||| ||  |||||||| |||| ||||||||||||||    
T  19754257 attcaattaatgatatatgtggtccatattatgaactacatacatcattaatt 19754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 19785549 - 19785497
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||||||||| ||  |||||||| |||| ||||||||||||||    
T  19785549 attcaattaatgatatatgtggtccatattatgaactacatacatcattaatt 19785497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 24331467 - 24331527
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| || |||||| | ||||||||| || | ||||||||||||||||||||||    
T  24331467 attcaattaataatgtatgtaatctatattatgaaccacatacatcattaattaaatgaat 24331527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 25856108 - 25856048
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| || ||||||||| || | |||||||||| |||||||||||    
T  25856108 attcaattaatgatgtatgtggtctatattatgaaccacatacatcattgattaaatgaat 25856048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 43635878 - 43635930
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||| |||||||| |||| ||||||||||||||    
T  43635878 attcaattaatgatgtatgtggttcatattatgaactacatacatcattaatt 43635930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 46779345 - 46779417
Alignment:
Q  43 atgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    ||||| ||||| |||||||||||| || | ||||||||||||||||||||||  |||| || |||||| ||||    
T  46779345 atgatgtatgtggtttatattatgaaccacatacatcattaattaaatgaatctaaaaaataaaatttgctta 46779417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 17659563 - 17659504
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| ||| | | ||||||| | |||||||||||||| ||||||    
T  17659563 attcaattaatgatatatgtggttcaaaatatggaccacatacatcattaattgaatgaa 17659504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 23329412 - 23329471
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||| ||||| ||||||    
T  23329412 attcaattaatgatgtatgtggtttataatatggaccacatacatcaataattgaatgaa 23329471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 23710933 - 23710874
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||| ||||| ||||||    
T  23710933 attcaattaatgatgtatgtggtttataatatggaccacatacatcaataattgaatgaa 23710874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 24529615 - 24529674
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| ||||||    
T  24529615 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaa 24529674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 29978590 - 29978531
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| ||||||    
T  29978590 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaa 29978531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32112356 - 32112415
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| ||||||    
T  32112356 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaa 32112415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 39294271 - 39294212
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||| |||| ||||||||||| | ||| |||||||||| ||||||    
T  39294271 attcaattaatgatgtatgcagttcatattatggaccacatatatcattaattgaatgaa 39294212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 39754141 - 39754200
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||||| |||| |||| || | || ||||||||||||||||||    
T  39754141 attcaattaatgatgtatgtagtctataatatgaaccagatgcatcattaattaaatgaa 39754200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 45070880 - 45070935
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||| |||||  || ||||||||||| | |||||||||||||||||||||    
T  45070880 aattaatgatgtatgttattcatattatggaccacatacatcattaattaaatgaa 45070935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 46996520 - 46996575
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||| ||||| ||| |||||||| |||| ||| |||||||||||||||||    
T  46996520 aattaatgatgtatgtggttcatattatgaactacataaatcattaattaaatgaa 46996575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 50038492 - 50038551
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| |||||| || |||||||||||||| ||||||    
T  50038492 attcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaa 50038551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 50045714 - 50045773
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| |||||| || |||||||||||||| ||||||    
T  50045714 attcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaa 50045773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 51126147 - 51126206
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| || |||||||| ||| | |||||||||||||| ||||||    
T  51126147 attcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaatgaa 51126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 54569454 - 54569395
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||||| || |||||||| || ||||||    
T  54569454 attcaattaatgatgtatgtggttcatattatggactacatgcatcattagttgaatgaa 54569395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 55131578 - 55131637
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||||||||||  | |||||| ||||||| ||||||    
T  55131578 attcaattaatgatgtatgttgtttatattatggagcacatacataattaattgaatgaa 55131637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 55501244 - 55501303
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| |||||||||||| || | ||||| |||||||| ||||||    
T  55501244 attcaattaatgatgtatgtggtttatattatgaaccacatacaccattaattgaatgaa 55501303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 19754310 - 19754232
Alignment:
Q  37 caattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    ||||||||||| ||||||||| ||| ||||||| | ||| |||||||||| |||||||  ||||  | |||||||||||    
T  19754310 caattaatgatgtatgtagttcataatatggaccacatatatcattaattgaatgaatctaaaaagtaaaatttactta 19754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 19785496 - 19785574
Alignment:
Q  37 caattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    ||||||||||| ||||||||| ||| ||||||| | ||| |||||||||| |||||||  ||||  | |||||||||||    
T  19785496 caattaatgatgtatgtagttcataatatggaccacatatatcattaattgaatgaatctaaaaagtaaaatttactta 19785574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 20542901 - 20542799
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaa 133  Q
    |||||||||||||| ||||| || ||||||||   | | |||||||||||||| |||||||  ||||    ||||||||||| |||| | ||||||||||    
T  20542901 attcaattaatgatgtatgtggtctatattataacccacatacatcattaattgaatgaatctaaaaatcaaaatttacttataattaaaaatggaggaa 20542802  T
Q  134 gta 136  Q
    |||    
T  20542801 gta 20542799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 49806430 - 49806396
Alignment:
Q  60 tattatggactatatacatcattaattaaatgaat 94  Q
    ||||||| |||||||||||||||||||||||||||    
T  49806430 tattatgaactatatacatcattaattaaatgaat 49806396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 21142140 - 21142201
Alignment:
Q  42 aatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatat 103  Q
    |||||| ||| ||||||||| ||  ||| ||||||||||||||||||||||||  |||||||    
T  21142140 aatgatgtatttagtttataataaagaccatatacatcattaattaaatgaatctaaaatat 21142201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 42184675 - 42184784
Alignment:
Q  28 atattgattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatg 127  Q
    ||||| ||| |||||| ||| ||||| |||||||||||  |  | |||||| ||||||| |||||||  |||| |||||||||| ||| |||| ||||||    
T  42184675 atattcatttaattaacgatgtatgtggtttatattataaatcacatacattattaattgaatgaatctaaaaaattaaatttatttataattaacaatg 42184774  T
Q  128 gaggaagtac 137  Q
     ||| |||||    
T  42184775 aagggagtac 42184784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 56420475 - 56420532
Alignment:
Q  36 tcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||| ||||| ||| |||  |||||||| |||||||||||||| ||||||    
T  56420475 tcaattaatgatgtatgtggttcataacatggactacatacatcattaattgaatgaa 56420532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 9968343 - 9968395
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||| ||| ||||||| | ||||||||||||||    
T  9968343 attcaattaatgatgtatgtggttaataatatggaccacatacatcattaatt 9968395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 11583749 - 11583809
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||  ||| |||| |||| |||||||||||||| |||||||    
T  11583749 attcaattaatgatgtatgtggtccataatatgaactacatacatcattaattgaatgaat 11583809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 31262684 - 31262616
Alignment:
Q  42 aatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaattt 110  Q
    ||||||||||||||| | || ||| ||  | |||||||||| ||||||| |||| ||||||||||||||    
T  31262684 aatgatatatgtagtctttaatatagatcacatacatcatttattaaattaatataaaatattaaattt 31262616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 36721788 - 36721844
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaat 90  Q
    ||||| |||||||||||||||||| ||| ||||||| | |||||| ||||| |||||    
T  36721788 attcatttaatgatatatgtagttaataatatggaccacatacattattaaataaat 36721844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 36786240 - 36786188
Alignment:
Q  42 aatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||| ||||| ||||||| ||  |||||||||||||||||||| |||||||    
T  36786240 aatgatgtatgtggtttataataaagactatatacatcattaattgaatgaat 36786188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 46996568 - 46996516
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaat 90  Q
    |||||||||| ||||||||| ||| |||| || | ||||||||||||||||||    
T  46996568 aattaatgatttatgtagttcataatatgaaccacatacatcattaattaaat 46996516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 50038548 - 50038488
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| |||||| |  |||||||| || | |||||||||||||| |||||||    
T  50038548 attcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaatgaat 50038488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 50045770 - 50045710
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| |||||| |  |||||||| || | |||||||||||||| |||||||    
T  50045770 attcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaatgaat 50045710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 54787024 - 54787084
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||| |||||| ||||| ||||||||||| ||| | |||||||||| ||| |||||||    
T  54787024 attcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaat 54787084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 23783398 - 23783311
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattg 121  Q
    |||||||||||||| ||||| ||| ||||||||||| |||||||||||||||| |||||||  |||  ||||||||| |||| |||||    
T  23783398 attcaattaatgatgtatgtggttcatattatggaccatatacatcattaattgaatgaatttaaacaattaaatttgcttataattg 23783311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 38014836 - 38014903
Alignment:
Q  33 gattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaa 100  Q
    |||||||||||||||  |||||||||||||||||||| | |||||| ||||||| |||||||||||||    
T  38014836 gattcaattaatgatccatgtagtttatattatggaccacatacattattaattgaatgaataaaaaa 38014903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 47931732 - 47931833
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaa 133  Q
    ||||||||| |||||||||| ||| ||||||||||||| |||||||||||||| ||| ||   |||| ||||||||| |||| ||||| ||||||||| |    
T  47931732 attcaatta-tgatatatgtggttcatattatggactacatacatcattaattgaataaacctaaaaaattaaatttgcttataattggcaatggaggga 47931830  T
Q  134 gta 136  Q
    |||    
T  47931831 gta 47931833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 43898188 - 43898131
Alignment:
Q  37 caattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| ||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  43898188 caattaatgatgtatgtggttcatattatggaccatatacatcattaattgaatgaat 43898131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 7672791 - 7672731
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| |||||||| ||||||||| |||| ||| |||||||||| |||||||    
T  7672791 attcaattaatgatttatgtagtctatattatgaactagatatatcattaattgaatgaat 7672731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 8126228 - 8126168
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||||||||| ||||||| ||||||  | |||||| |||||||||||||||    
T  8126228 attcaattaatgatatatgtggtttataatatggatcacatacataattaattaaatgaat 8126168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 13083913 - 13083973
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||||||||||  | ||||||||||||||||||||||    
T  13083913 attcaattaatgatgtatgttgttcatattatggatcacatacatcattaattaaatgaat 13083973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 18480971 - 18480915
Alignment:
Q  37 caattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||| ||||| ||||||| ||||||| | |||||||||||||||||||||    
T  18480971 caattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaa 18480915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 29076567 - 29076627
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||||||||||||  ||||||| |||||| | |||||||||||||| |||||||    
T  29076567 attcaattaatgatatatgtgatttatatcatggaccacatacatcattaattgaatgaat 29076627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 16127846 - 16127787
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  16127846 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaa 16127787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32589357 - 32589416
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  32589357 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 32589416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 39530437 - 39530503
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaa 100  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| |||||| ||||||    
T  39530437 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacaaaaaa 39530503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 40326536 - 40326470
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaa 100  Q
    |||||||||||||| ||||| ||||||| |||| || | |||||||||||||| ||||||| |||||    
T  40326536 attcaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaatgaatcaaaaa 40326470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 26043348 - 26043267
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||| ||| ||||||| || ||||||||||||| |||||||  ||||  | |||||||||||    
T  26043348 attcaattaatgatgtatgtggttcataatatggaccatgtacatcattaattcaatgaatctaaaaagtaaaatttactta 26043267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 7672735 - 7672795
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||||||| ||||| ||| ||| ||||| ||| |||||||||| |||||||    
T  7672735 attcaattaatgatatatctagttcataatatagactacataaatcattaattgaatgaat 7672795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 32833722 - 32833774
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||||||| ||| ||||||| | ||||||||||||||    
T  32833722 attcaattaatgatgtatgtagttcataatatggaccacatacatcattaatt 32833774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 1043965 - 1044024
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||||| ||||| ||| ||  | |||||||||||||||||||||    
T  1043965 attcaattaatgatgtatgtagcttataatatagatcacatacatcattaattaaatgaa 1044024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 19679004 - 19679063
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| |||  |||||||| |||||||||||||| ||||||    
T  19679004 attcaattaatgatgtatgtggttcataacatggactacatacatcattaattgaatgaa 19679063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 21659236 - 21659177
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| || ||||||||| |  | |||||||||||||| ||||||    
T  21659236 attcaattaatgatatatgtggtctatattatgaatcacatacatcattaattgaatgaa 21659177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 22995794 - 22995735
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| |||||||  || | |||||||||||||||||||||    
T  22995794 attcaattaatgatgtatgtggttcatattataaaccacatacatcattaattaaatgaa 22995735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 32833778 - 32833719
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||  |||||||| |||| |||||||||||||| ||||||    
T  32833778 attcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaatgaa 32833719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 40760813 - 40760872
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||| || ||||||||| ||||||||||  | |||||||| ||||||||||||    
T  40760813 attcaattaataatgtatgtagttcatattatggatcacatacatcaataattaaatgaa 40760872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 42595784 - 42595839
Alignment:
Q  39 attaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||| ||||| ||||||| ||||||| | |||||||||||||| |||||||    
T  42595784 attaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaat 42595839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 44435216 - 44435275
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| ||||||    
T  44435216 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaa 44435275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 46967549 - 46967474
Alignment:
Q  40 ttaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||| ||||| ||| ||| ||||||||| |||||||||||| | |||||||| |||| || || ||||||||    
T  46967549 ttaatgatgtatgtggttcataatatggactacatacatcattaaatgaatgaatataaaaaataaattttactta 46967474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 51760211 - 51760270
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  || |||||||| || | |||||||||||||||||||||    
T  51760211 attcaattaatgatgtatgtgattcatattatgaaccacatacatcattaattaaatgaa 51760270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 54680531 - 54680590
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  || ||| ||||||||| |||||||||||||| ||||||    
T  54680531 attcaattaatgatgtatgtgattcataatatggactacatacatcattaattgaatgaa 54680590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 23005057 - 23005106
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcatta 83  Q
    ||||||||||||||||||||  |||||| |||| || |||||||||||||    
T  23005057 attcaattaatgatatatgtgatttataatatgaaccatatacatcatta 23005106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 29676254 - 29676307
Alignment:
Q  40 ttaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||| |||||  |||||| ||||||||| |||||||||||| ||||||||    
T  29676254 ttaatgatctatgttatttataatatggactacatacatcattaaataaatgaa 29676307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 14626670 - 14626730
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||| |||||||| ||||| ||| |||||||| || | |||||||||||||| |||||||    
T  14626670 attcatttaatgatgtatgtggttcatattatgaaccacatacatcattaattgaatgaat 14626730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 34205605 - 34205665
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||||||  ||||  || ||| ||||||| | ||||||||||||||||||||||    
T  34205605 attcaattaatgatgcatgtgattcataatatggaccacatacatcattaattaaatgaat 34205665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 40504164 - 40504076
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattga 122  Q
    ||||||||||| || |||||  |||||||||||||  | |||||||||||||| ||||||    ||| || ||||||||||| ||||||    
T  40504164 attcaattaataatgtatgtgatttatattatggatcacatacatcattaattgaatgaaccttaaaaatcaaatttacttataattga 40504076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 51204577 - 51204521
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||| ||||| ||| ||| ||||||  | ||||||||||||||||||||||    
T  51204577 aattaatgatgtatgtggttcataatatggatcacatacatcattaattaaatgaat 51204521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 51859133 - 51859185
Alignment:
Q  77 atcattaattaaatgaataaaaaatattaaatttacttacaattgacaatgga 129  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||||  |||||||    
T  51859133 atcattaattgaatgaataaaaaaaattaaatttgcttataattagcaatgga 51859185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 52638075 - 52638135
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| || |||||  |||||||||| ||| | |||||||||||||| |||||||    
T  52638075 attcaattaataatgtatgtgatttatattatcgaccacatacatcattaattgaatgaat 52638135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 14131 - 14071
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||||||||||| ||| ||| |||||||||||||||| |||||||    
T  14131 attcaattaatgatctatgtagtttataatatagaccatatacatcattaattgaatgaat 14071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 24733212 - 24733132
Alignment:
Q  35 ttcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    ||||||||||||||||||| ||||||||||| ||| || ||||||||||||| ||||||   |||| ||||||||| ||||    
T  24733212 ttcaattaatgatatatgtggtttatattatagaccatttacatcattaattgaatgaacctaaaaaattaaatttgctta 24733132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 19532051 - 19531992
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||||||||||| ||||||| | |||||||||||||| ||||||    
T  19532051 attcaattaatgatgtatgtagtttataatatggaccacatacatcattaattgaatgaa 19531992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 46221120 - 46221179
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||||||||||    
T  46221120 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaa 46221179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 46578307 - 46578366
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| |||||||||||| |||| |||||||||||||| ||||||    
T  46578307 attcaattaatgatgtatgtggtttatattatgaactacatacatcattaattgaatgaa 46578366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 11032339 - 11032404
Alignment:
Q  28 atattgattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||| |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  11032339 atattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 11032404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 27942423 - 27942363
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||||||| ||||||  |||||||||||||||| |||||||    
T  27942423 attcaattaatgatgtatgtggtttataatatggatcatatacatcattaattgaatgaat 27942363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 3498336 - 3498395
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  3498336 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaa 3498395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 9503941 - 9504024
Alignment:
Q  37 caattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaatt 120  Q
    ||||||||||| ||||||||| |||||||  || | ||||||||||||||||||||||  ||||  |||||||| |||| ||||    
T  9503941 caattaatgatgtatgtagttcatattatataccacatacatcattaattaaatgaatctaaaaagttaaatttgcttataatt 9504024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 37066224 - 37066283
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| || |||||||||||| | |||||||||||||| ||||||    
T  37066224 attcaattaatgatgtatgtggtctatattatggaccacatacatcattaattgaatgaa 37066283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 46477175 - 46477234
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  46477175 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaa 46477234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 12171705 - 12171754
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaatta 87  Q
    |||||||||| ||||||||||||| ||||||  |||||||||||||||||    
T  12171705 aattaatgatgtatgtagtttataatatggatcatatacatcattaatta 12171754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 33471532 - 33471613
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| ||||||   |||| || |||||||||||    
T  33471532 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacctaaaaaataaaatttactta 33471613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 35593739 - 35593658
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| ||| |||  |||| || |||||||||||    
T  35593739 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaataaatctaaaaaataaaatttactta 35593658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 12307915 - 12307855
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||| |||||||| ||||| ||| |||||||||| || |||||||||||| |||||||||    
T  12307915 attcatttaatgatgtatgtggttcatattatggattacatacatcattaaataaatgaat 12307855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 45833232 - 45833292
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||| |||||||||  ||||||||||||| |||||||    
T  45833232 attcaattaatgatgtatgtggttcataatatggactacgtacatcattaattgaatgaat 45833292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 47778471 - 47778531
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||||||| || |||||  |||||||||| ||||| |||||||||||||| |||||||    
T  47778471 attcaattaataatgtatgtgatttatattatcgactacatacatcattaattgaatgaat 47778531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 24166305 - 24166364
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| ||| ||||||||||  | ||||||||||| || ||||||    
T  24166305 attcaattaatgatatatgtggttcatattatggatcacatacatcattagttgaatgaa 24166364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 48590683 - 48590624
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  || ||||||||||| | |||||||||||||| ||||||    
T  48590683 attcaattaatgatgtatgtgattcatattatggaccacatacatcattaatttaatgaa 48590624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 29205373 - 29205340
Alignment:
Q  71 atatacatcattaattaaatgaataaaaaatatt 104  Q
    |||||||||||||||| |||||||||||||||||    
T  29205373 atatacatcattaatttaatgaataaaaaatatt 29205340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 31758525 - 31758606
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    ||||||||||| ||||||||  ||||||||||| |  | |||||||||||||||||| ||   |||| || |||||||||||    
T  31758525 attcaattaataatatatgtgatttatattatgaatcacatacatcattaattaaataaacttaaaaaataaaatttactta 31758606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 33471588 - 33471507
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| || |||| |||| || | |||||||||||||| |||||||  |||| || |||||| ||||    
T  33471588 attcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaatctaaaaaataaaatttgctta 33471507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 35593683 - 35593764
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| ||  |||||||| || | |||||||||||||| ||||||   ||||||| |||||| ||||    
T  35593683 attcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacctaaaatataaaatttgctta 35593764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 6250642 - 6250702
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||| |||||||||||| || ||||||||  |||  |||||||||| |||||||||||    
T  6250642 attcaataaatgatatatgtggtctatattatatactgcatacatcatttattaaatgaat 6250702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 21387618 - 21387678
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| |||||||| | ||||||  || | |||||||||| |||||||||||    
T  21387618 attcaattaatgatgtatgtagtctttattatataccacatacatcatttattaaatgaat 21387678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 31319558 - 31319606
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcatt 82  Q
    |||||||||||||||||||| || | |||||| ||||| ||||||||||    
T  31319558 attcaattaatgatatatgtggtctttattatagactacatacatcatt 31319606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 32490687 - 32490627
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||| ||||||||| ||| |||| | |||||| ||| | ||||||||||||||||||||||    
T  32490687 attccattaatgatgtatatagtctttattatagacaacatacatcattaattaaatgaat 32490627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 39024105 - 39024165
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||| || ||||| ||||| ||||||| |||||||||| ||||||||||| | |||||||    
T  39024105 attcatttgatgatgtatgttgtttataatatggactatgtacatcattaaatgaatgaat 39024165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 39970199 - 39970259
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||||| |||||| ||||| ||||||||||| ||| | |||||||||| ||| |||||||    
T  39970199 attcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaat 39970259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 46578363 - 46578303
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||||||| ||| |||  || | |||||||||||||| |||||||    
T  46578363 attcaattaatgatgtatgtagttcataatataaaccacatacatcattaattgaatgaat 46578303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 46658774 - 46658834
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| |||||| || ||| ||||||  | |||||||||||||| |||||||    
T  46658774 attcaattaatgatgtatgtaattcataatatggaacacatacatcattaattgaatgaat 46658834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 48392964 - 48392904
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| || ||||||||| |  | |||||||| |||||||||||||    
T  48392964 attcaattaatgatgtatgtggtatatattatgaatcacatacatcactaattaaatgaat 48392904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 6169908 - 6169848
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||||||||    
T  6169908 attcaattaatgatgtatgtggttaatattattgactacatacatcattaattaaatgaat 6169848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 50998346 - 50998405
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||| | ||| |||||||||||||||||||||||||||| ||||||    
T  50998346 attcaattaatgatgtatttggttcatattatggactatatacatcattaattgaatgaa 50998405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 52253574 - 52253661
Alignment:
Q  28 atattgattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    ||||| |||||||||||||| |||||  |||||| ||||||||| || ||||||||||| |||||||  |||| || |||||||||||    
T  52253574 atattcattcaattaatgatgtatgtgatttataatatggactacatgcatcattaattgaatgaatttaaaaaataaaatttactta 52253661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 26453030 - 26453103
Alignment:
Q  42 aatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||| |||||||  |||| |||| |||| ||||    
T  26453030 aatgatatatgtggttcatattatggaccatatacatcattaattgaatgaatctaaaaaattacatttgctta 26453103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 12062236 - 12062295
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| ||| ||| ||||||| | |||||||||||||| ||||||    
T  12062236 attcaattaatgatatatgtggttcataatatggaccacatacatcattaattcaatgaa 12062295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 21852479 - 21852538
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| ||| ||||||||||  | |||||||||||||| ||||||    
T  21852479 attcaattaatgatatatgtggttcatattatggatcacatacatcattaattgaatgaa 21852538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 24023407 - 24023466
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||||||||| || ||| |||||||| ||  ||||||||||||||||||||||    
T  24023407 attcaattaatgatatacgtggttcatattatgaaccgtatacatcattaattaaatgaa 24023466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 24478707 - 24478766
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||||| || ||||||||  || | |||||||||||||||||||||    
T  24478707 attcaattaatgatatatgtggtctatattataaaccacatacatcattaattaaatgaa 24478766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 47293242 - 47293180
Alignment:
Q  74 tacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaagta 136  Q
    |||||||||||||||||||||  |||| |||||||||||||| ||||| ||| ||||| ||||    
T  47293242 tacatcattaattaaatgaatctaaaaaattaaatttacttataattggcaacggagggagta 47293180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 38824389 - 38824308
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| || ||||||||| || | |||||||||||||| |||||| | |||| || |||||| ||||    
T  38824389 attcaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaatgaacataaaaaataaaatttgctta 38824308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 39216145 - 39216206
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaata 95  Q
    |||||||||||||| ||||| || |||| ||  |||||||||||||||||||| ||||||||    
T  39216145 attcaattaatgatgtatgttgtctataataaagactatatacatcattaattgaatgaata 39216206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 45239089 - 45239008
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| || ||||||||| || | |||||||||| |||||||||||  ||||  | |||||||||||    
T  45239089 attcaattaatgatgtatgtggtctatattatgaaccacatacatcattgattaaatgaatctaaaaagtaaaatttactta 45239008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 12993566 - 12993618
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||| ||||||||||| | ||||||||||||||    
T  12993566 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 12993618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 17622857 - 17622809
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    ||||||||||  |||||||| |||||||||| |||||||||||||||||    
T  17622857 aattaatgatgcatgtagttcatattatggattatatacatcattaatt 17622809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 21909939 - 21909887
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||||||| ||| ||||||| | ||||||||||||||    
T  21909939 attcaattaatgatgtatgtagttcataatatggaccacatacatcattaatt 21909887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 23079398 - 23079449
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaat 90  Q
    |||||||||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  23079398 aattaatgatgtatttagtttatattatggac-acatacatcattaattaaat 23079449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 33738261 - 33738209
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||||||| ||||||| | ||||||||||||||    
T  33738261 attcaattaatgatgtatgtggtttataatatggaccacatacatcattaatt 33738209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 37255224 - 37255164
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| |||||||    
T  37255224 attcaattaatgatgtatgtggttaataatatggaccacatacatcattaattgaatgaat 37255164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 1252173 - 1252232
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| |  ||||||||||||| ||||||    
T  1252173 attcaattaatgatgtatgtggttcatattatggaccacgtacatcattaattgaatgaa 1252232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 4682979 - 4683038
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| ||||||    
T  4682979 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaa 4683038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 15311570 - 15311511
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||| |||||||| ||||||||||||| ||||||| | |||||||||||| | ||||||    
T  15311570 attcatttaatgatgtatgtagtttataatatggaccacatacatcattaaatgaatgaa 15311511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 17310516 - 17310457
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||||||| |  ||| |||||| ||| |||||||||||||||| ||||||    
T  17310516 attcaattaatgatatatatgatttgtattatagaccatatacatcattaattgaatgaa 17310457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 27549143 - 27549084
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||||||||||| ||||||    
T  27549143 attcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaa 27549084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 31909847 - 31909788
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| ||| ||| | |||||||||||||| ||||||    
T  31909847 attcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaa 31909788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 40341824 - 40341769
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||| ||||| |||||||  |||||||| |||||||||||||| ||||||    
T  40341824 aattaatgatgtatgtggtttataacatggactacatacatcattaattgaatgaa 40341769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 43738684 - 43738719
Alignment:
Q  71 atatacatcattaattaaatgaataaaaaatattaa 106  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43738684 atatacatcattaattaaatgaatataaaatattaa 43738719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 48605168 - 48605109
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| |||||  || ||||||||||| | |||||||||||||| ||||||    
T  48605168 attcaattaatgatgtatgtgattcatattatggaccacatacatcattaattgaatgaa 48605109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 1358270 - 1358213
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatg 91  Q
    |||||| ||||||| ||||| ||| ||| ||||||| | |||||||||||||||||||    
T  1358270 attcaactaatgatgtatgtggttcataatatggaccacatacatcattaattaaatg 1358213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 5852730 - 5852779
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcatta 83  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||    
T  5852730 attcaattaatgatgtatgtggtttataatatggaccacatacatcatta 5852779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 6763432 - 6763383
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcatta 83  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||    
T  6763432 attcaattaatgatgtatgtggtttataatatggaccaaatacatcatta 6763383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 46518043 - 46517994
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcatta 83  Q
    |||||||||||||| ||||| ||||||| ||||||| | |||||||||||    
T  46518043 attcaattaatgatgtatgtggtttataatatggaccacatacatcatta 46517994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 47293292 - 47293345
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatta 87  Q
    |||||||||||||| ||||| ||| ||||||||||  | |||||||||||||||    
T  47293292 attcaattaatgatgtatgtggttcatattatggatcacatacatcattaatta 47293345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 52879926 - 52879987
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaata 95  Q
    |||||||||||||| ||||| |   ||||||||||| | |||||||||||||| ||||||||    
T  52879926 attcaattaatgatgtatgtggaccatattatggaccacatacatcattaattgaatgaata 52879987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 6758644 - 6758584
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| || || || |||| ||  |||||||||||||||||||| |||||||    
T  6758644 attcaattaatgatgtacgttgtctataataaagactatatacatcattaattgaatgaat 6758584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 12447496 - 12447556
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| | ||| ||| ||||||||||  | |||||||||||||| |||||||    
T  12447496 attcaattaatgatgtttgtggttcatattatggatcacatacatcattaattgaatgaat 12447556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 21909883 - 21909935
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| ||||| ||  |||||||| |||| ||||||||||||||    
T  21909883 attcaattaatgatgtatgtggtccatattatgaactacatacatcattaatt 21909935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 26423470 - 26423526
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||| ||||| ||||| | |||| || | ||||||||||||||||||||||    
T  26423470 aattaatgatgtatgtggtttacaatatgaaccacatacatcattaattaaatgaat 26423526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 34598904 - 34598992
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattga 122  Q
    |||||| ||||||| ||||| ||| ||| |||| |  |||||||||||||||| |||||||  ||||  | ||||||||||| ||||||    
T  34598904 attcaaataatgatgtatgtggttcataatatgaatcatatacatcattaattgaatgaatctaaaaagtcaaatttacttataattga 34598992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 38824333 - 38824393
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| ||| ||| ||| | |||||||||||||| |||||||    
T  38824333 attcaattaatgatgtatgtggttcataatatagaccacatacatcattaattgaatgaat 38824393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 39216207 - 39216143
Alignment:
Q  28 atattgattcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatga 92  Q
    ||||| |||||||||||||| ||| |||| | |||||| ||| | |||||||||||||| |||||    
T  39216207 atattcattcaattaatgatgtatatagtctttattatagacaacatacatcattaattgaatga 39216143  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 40341772 - 40341832
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||||||  || ||||  || | ||||||||||||||||||||||    
T  40341772 attcaattaatgatgtatgtagtccatgttataaaccacatacatcattaattaaatgaat 40341832  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 41155002 - 41154950
Alignment:
Q  38 aattaatgatatatgtagtttatattatggactatatacatcattaattaaat 90  Q
    |||||||||||||||   | ||||||||||| |||||| ||||||||||||||    
T  41155002 aattaatgatatatgcgatctatattatggattatatatatcattaattaaat 41154950  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 42140428 - 42140371
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||  ||||||| ||| |||||||||||||||| ||||||    
T  42140428 attcaattaatgatgtatgtggt--atattatagaccatatacatcattaattgaatgaa 42140371  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 667770 - 667829
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||| ||||||||| ||||||||| ||||||||||| | |||||||||||||| ||||||    
T  667770 attccattaatgatgtatgtagttcatattatggaccacatacatcattaattgaatgaa 667829  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32786158 - 32786217
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  32786158 attcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 32786217  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 31577537 - 31577435
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggaggaa 133  Q
    |||||||||||||| ||||||||| ||| |||||| || |||||| ||||||| |||||||  |||| || |||||| |||| | || | |||| |||||    
T  31577537 attcaattaatgatgtatgtagttcataatatggattacatacataattaattgaatgaatctaaaaaataaaatttgcttatattttaaaatgaaggaa 31577438  T
Q  134 gta 136  Q
    |||    
T  31577437 gta 31577435  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 3212283 - 3212335
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    |||||||||||||| |||||  |||||||||||||| | ||||||||||||||    
T  3212283 attcaattaatgatgtatgtgatttatattatggaccacatacatcattaatt 3212335  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 14804207 - 14804264
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||||||| |||||||  ||||||||||||||| ||||||    
T  14804207 attcaattaatgatgtatgtggtttataatatggac--tatacatcattaattgaatgaa 14804264  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 29938448 - 29938388
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    ||||| |||||||| ||||||||| ||||||||||| | |||||||||||| | |||||||    
T  29938448 attcatttaatgatgtatgtagttcatattatggaccacatacatcattaaatgaatgaat 29938388  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 3343875 - 3343816
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||| |||| ||||| ||| ||||||||||| | |||||||||||||| ||||||    
T  3343875 attcaattattgatgtatgtggttcatattatggaccacatacatcattaattgaatgaa 3343816  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 3418854 - 3418795
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    ||||||||||| || ||||| ||| |||||||| || |||||||||||||||| ||||||    
T  3418854 attcaattaataatgtatgtggttcatattatgaaccatatacatcattaattgaatgaa 3418795  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 21478595 - 21478654
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| ||| ||||||| ||| | |||||||||||||| ||||||    
T  21478595 attcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaa 21478654  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 31759366 - 31759425
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||  ||| ||||||||||| | |||||||||||||| ||||||    
T  31759366 attcaattaatgatgtatgcggttcatattatggaccacatacatcattaattgaatgaa 31759425  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 6048054 - 6047994
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| ||| |||||||||   | |||||||||||||| |||||||    
T  6048054 attcaattaatgatgtatgtggttcatattatgggtcacatacatcattaattgaatgaat 6047994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 21478651 - 21478591
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaat 94  Q
    |||||||||||||| ||||| || |||| |||| || | |||||||||||||| |||||||    
T  21478651 attcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaat 21478591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 33169224 - 33169276
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaatt 86  Q
    ||||||||||| || ||||| ||||||| ||||||| | ||||||||||||||    
T  33169224 attcaattaataatgtatgtggtttataatatggaccacatacatcattaatt 33169276  T

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Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 5430 - 5511
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttactta 115  Q
    |||||||||||||| ||||| || ||||||||  || | ||||||||||||||||||||||  ||||| | |||||| ||||    
T  5430 attcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgtaaaattttctta 5511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 58398 - 58301
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaatggagg 131  Q
    |||||||||||||| ||||| ||| ||||||||||| | |||||||||| ||| ||||||   ||||  |||||||| |||| ||||| ||| |||||    
T  58398 attcaattaatgatgtatgtggttcatattatggaccacatacatcattgattgaatgaacttaaaaagttaaatttgcttataattggcaacggagg 58301  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 11682 - 11623
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaa 93  Q
    |||||||||||||| ||||| || |||| ||||||| | |||||||||||||| ||||||    
T  11682 attcaattaatgatgtatgtggtctataatatggaccacatacatcattaattgaatgaa 11623  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 54731 - 54641
Alignment:
Q  35 ttcaattaatgatatatgtagtttatattatggactatatacatcattaattaaatgaataaaaaatattaaatttacttacaattgacaa 125  Q
    |||||||||| || ||| | ||| ||||| ||||| | |||||||||||||| || ||| | |||| |||||||||| ||| |||||||||    
T  54731 ttcaattaataatgtatatggttcatattgtggaccacatacatcattaattgaacgaacataaaaaattaaatttatttataattgacaa 54641  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 44698 - 44642
Alignment:
Q  34 attcaattaatgatatatgtagtttatattatggactatatacatcattaattaaat 90  Q
    ||||||| |||||||||||| || |||| ||||||||| ||||| |||| |||||||    
T  44698 attcaataaatgatatatgtcgtctataatatggactacatacaccatttattaaat 44642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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