View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14435_low_72 (Length: 271)
Name: NF14435_low_72
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14435_low_72 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 7540004 - 7540237
Alignment:
| Q |
21 |
gataagggtacacttcttttagctacagttggtattgggataagccaaactttattcacattactatcatgttttttgttggataaaattgggagaagga |
120 |
Q |
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| T |
7540004 |
gataagggtacacttcttttagctacagttggtattgggataagccaaactttattcacattactatcatgttttttgttggataaaattgggagaagga |
7540103 |
T |
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| Q |
121 |
ttctattattggtcagttcaggaggtgtgattttttctatgttagggttatgtgtttgttcagctatagtggagaattctaaattaggagaagaaccatt |
220 |
Q |
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| T |
7540104 |
ttctattattggtcagttcaggaggtgtgattttttctatgttagggttatgtgtttgttcagctatagtggagaattctaaattaggagaagaaccatt |
7540203 |
T |
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| Q |
221 |
atgggccataatatttactattattgttatatac |
254 |
Q |
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| T |
7540204 |
atgggccataatatttactattattgttatatac |
7540237 |
T |
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