View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14435_low_89 (Length: 237)
Name: NF14435_low_89
Description: NF14435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14435_low_89 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 48332539 - 48332739
Alignment:
| Q |
18 |
gaagcaggggagttgaactcacgtatgaatgcgaataagatttagaggtatcaatatgatttcatcacttaccactattatacacatacagatggagtag |
117 |
Q |
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| T |
48332539 |
gaagcaggggagttgaactcacgtatgaatgcgaataagatttagaggtatcaatatgatttcatcacttaccactattatacacatacagatggagtgg |
48332638 |
T |
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| Q |
118 |
actcttatgagttatcaatataaggaatcatgcaagtatcagccagggaaacttggcaaggcagtcgataatataaacgtagtgcgtacgtgtgccatgt |
217 |
Q |
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| T |
48332639 |
actcttatgagttatcaatataaggaatcatgcaagtatcagccagggaaacttggcaaggcagtcgataatataaacgtagtgcgtacgtgtgccatgt |
48332738 |
T |
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| Q |
218 |
g |
218 |
Q |
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| T |
48332739 |
g |
48332739 |
T |
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