View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14436_high_7 (Length: 324)
Name: NF14436_high_7
Description: NF14436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14436_high_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 22830832 - 22831143
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22830832 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaactggag |
22830931 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22830932 |
ctaaggtaacatcaatctttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
22831031 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22831032 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaattccaacatgattatcattgatatcatcaaactcaaaatttttacga |
22831131 |
T |
|
| Q |
301 |
gtgtcaagctca |
312 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22831132 |
gtgtcaagctca |
22831143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 22839853 - 22840140
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
22839853 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaaatggag |
22839952 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||| | || |
|
|
| T |
22839953 |
ctaaggtaacatcaatctttttcttcactctatcatattcaatccatacttgcataggatatccactggagagggataaatccctgaatcgattatattc |
22840052 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactca |
288 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22840053 |
atcgtaatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactca |
22840140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 22889093 - 22889404
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||| | ||| | |
|
|
| T |
22889093 |
aatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcaccaacactcattggtg |
22889192 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| | ||||| ||||| | | |
|
|
| T |
22889193 |
ctaaagtaacatcaatctttttcttcactccatcatattcaatccatacctgcatagggtatccactggaaagggataaatccttgaattgaccataacc |
22889292 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacga |
300 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22889293 |
atcataatatcctgcaggagttgaatcagctgatttcaaatcattgatatcaattccaacatggttatcgttgatatcatcaaactcaaaattttgacga |
22889392 |
T |
|
| Q |
301 |
gtgtcaagctca |
312 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22889393 |
gtgtcaagctca |
22889404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 22814828 - 22815139
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||| | ||||| |
|
|
| T |
22814828 |
aatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcaccaacactcattggag |
22814927 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||| |||||||||||||| |||||| |||| ||| ||||||||| | ||||||| ||||| ||| |
|
|
| T |
22814928 |
ctaaagtaacatcaatctttttcttcactccatcatagtcaatccatacctgtataggaaatccattggaaagggataactccctgaattgaccatgatc |
22815027 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacga |
300 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
22815028 |
attataatatcctgcaggagttgaattagctgatttcaaataattgatatcgataccaacatggttatcattgatatcatcaaactgcaaatcttgacga |
22815127 |
T |
|
| Q |
301 |
gtgtcaagctca |
312 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22815128 |
gtgtcaagctca |
22815139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 22893754 - 22894032
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| |||||| |||||||| ||||| ||| ||||| |
|
|
| T |
22893754 |
aatccaacatacatactattgttaagaattggagaaagatctttggtcaatgataacaaaggttgttttggtttaa---------caacattaattggag |
22893844 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||| ||||| || |||| ||||| ||||| || | |
|
|
| T |
22893845 |
ctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacctgcataggatagccactgataaggcttatattcttgaattgaccattacc |
22893944 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactca |
288 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22893945 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactca |
22894032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 22858260 - 22858574
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgac---taaaaccaacactaactg |
97 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| ||| || ||||||| | || |||||| | ||| || |
|
|
| T |
22858260 |
aatccaacatacattctattgttgagaattggagaaagatctttcgtgaatgataacaaaggtcgtgctggtttaacaacattacaaccaaaattaattg |
22858359 |
T |
|
| Q |
98 |
gagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagt |
197 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| | ||||||||| | ||||||||||| | |
|
|
| T |
22858360 |
gagctaatgtaacatcaatatttttcttcactccatcatattctatccatacctgcataggatatccactagaaagggataagtcgttgaatcgaccaat |
22858459 |
T |
|
| Q |
198 |
atcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaattttga |
297 |
Q |
| |
|
| ||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||| || |||| |
|
|
| T |
22858460 |
agcattatagtatcctgcaggagttgaattagctgatttcaaattattgatgtcaataccagcatggttattattgatatcatcaaactcaagatcttga |
22858559 |
T |
|
| Q |
298 |
cgagtgtcaagctca |
312 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22858560 |
atagtgtcaagctca |
22858574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 22875723 - 22876004
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||| | | | ||||| |
|
|
| T |
22875723 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctat------tggag |
22875816 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| |||||||||||| |||| |||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| | || |
|
|
| T |
22875817 |
ctaaagtaacatcaatcttttttttcactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaatcgattatattc |
22875916 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactca |
288 |
Q |
| |
|
||| |||||||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |
|
|
| T |
22875917 |
atcgtaatatcctgtagaagttgaaatagctgatttcaaatcattgatatcaattccaacatggttatcatcgatatcattaaactca |
22876004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 22880392 - 22880642
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| || || ||||||||| | ||||||||||||||| |||| |
|
|
| T |
22880392 |
aatccaacatacatactattgttgagaattggagaaagatctttggtcaatgacaacaaatgtcgtgttggtttattattaaaaccaacactaatcggag |
22880491 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||||| | |||||||| || ||| |
|
|
| T |
22880492 |
ctaatgtaacctcaatctttttcttcactccatcatagtcaatccatacctgcatgggatatccactggaaagggataaatccttgaatcgatcataatc |
22880591 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatc |
251 |
Q |
| |
|
||||||||||||||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
22880592 |
atcataatatcctgcagaaattgaatttactgatttcaaatcattgatatc |
22880642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 22809442 - 22809732
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgac---taaaaccaacactaactg |
97 |
Q |
| |
|
|||||||||||||| ||| |||| |||||||| |||||||||||||| ||||||||| ||| || |||||||| | ||||||||||| ||| || |
|
|
| T |
22809442 |
aatccaacatacatactagtgttaagaattggagaaagatctttggtgaatgataacaaaggtcgtgttggtttaacaacattaaaaccaacattaattg |
22809541 |
T |
|
| Q |
98 |
gagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagt |
197 |
Q |
| |
|
||||||| ||| |||||||| ||||||| | |||||||||||||||||||| |||||||||| |||||| |||| | |||| ||||| ||||| | |
|
|
| T |
22809542 |
gagctaaagtagcatcaatctttttcttttcaccatcatattcaatccatacatgcataggatagccactgaaaaggctcatattcttgaattgaccatt |
22809641 |
T |
|
| Q |
198 |
atcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactca |
288 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22809642 |
actatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatatcatcaaactca |
22809732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 22898073 - 22898351
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||| |||||||| | |||||| ||||||||| |||||||||| ||| |||||| |||||||| ||||| ||| ||||| |
|
|
| T |
22898073 |
aatccaacatacatactattgtttaaaattggagaaagatctctggtcaatgacaacaaaggttgttttggtttaa---------caacattaattggag |
22898163 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| | ||||| || | |
|
|
| T |
22898164 |
ctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacctgcataggattgccactgaaaagggtcaaattcttgagttgaccattaac |
22898263 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactca |
288 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22898264 |
atcataatatcctgcaggagttgatttagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcattaaactca |
22898351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 162 - 312
Target Start/End: Original strand, 22885559 - 22885706
Alignment:
| Q |
162 |
tccactggtaagggataaattcctgaatcgaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaaca |
261 |
Q |
| |
|
|||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22885559 |
tccactggaaagggataaattcctgaatc---cataatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaata |
22885655 |
T |
|
| Q |
262 |
tggttatcattgatatcatcaaactcaaaattttgacgagtgtcaagctca |
312 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22885656 |
tggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctca |
22885706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22885426 - 22885539
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||| |
|
|
| T |
22885426 |
aatccaacatacattctattgttgagtattggagaaagatctttggtcaatgataacaaaggttgtgttggtttatcactaaaaccaacactaattggag |
22885525 |
T |
|
| Q |
101 |
ctaaggtaacatca |
114 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
22885526 |
ctaaagtaacatca |
22885539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 22805119 - 22805377
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||||||||||| |||||||| ||| | |||||||| ||||| |||||||| |
|
|
| T |
22805119 |
aatccaacatacatactattgttaagaattggagaaagatctttggtcattgataacgaaggtcctgttggtttaa---------caacataaactggag |
22805209 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||| || | |||| | ||||| ||| |
|
|
| T |
22805210 |
ctaaagtaacatcaatctttttcttcactccatcataatcaatccatacctgtataggatttccactggaaaggtctactgttctgatttgaccatgatc |
22805309 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttat |
268 |
Q |
| |
|
||| ||||| |||||| |||||| | ||||||||| ||||||||||| ||||||| | ||||||| |
|
|
| T |
22805310 |
atcgtaataggctgcagtagttgagacaactgatttcagatcattgatattaataccatcgtggttat |
22805377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 22913475 - 22913755
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||| ||| |||| ||||||| |||||||||||| ||||||||||| |||||| |||||||| ||||| ||| ||||| |
|
|
| T |
22913475 |
aatccaacatacatactagtgttaagaattgaagaaagatctttgttcaatgataacaaaggttgttttggtttaa---------caacattaattggag |
22913565 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaa-tcg--accagt |
197 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||| | ||| | ||||| || ||||| |||| |||||| |||| || |||| |
|
|
| T |
22913566 |
ctaaagtaacatcaatctttttcttcactccatcatattccaaccaaatttgcattggtaagccactaaaaaggctcaaattcttgaactcattaccatc |
22913665 |
T |
|
| Q |
198 |
atcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactc |
287 |
Q |
| |
|
| ||||||||||||||| | || || || ||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
22913666 |
aatatcataatatcctgccgaagccgatttctctgatttcaaaccattgatatcaattccaacatggttgtcattgatatcatcgaactc |
22913755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 22826059 - 22826209
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||| |||||||| | |||||| | ||||||| |||||||||| ||| |||||| |||||||| ||||| ||| ||||| |
|
|
| T |
22826059 |
aatccaacatacatactattgttcaaaattggaggaagatctctggtcaatgaaaacaaaggttgttttggtttaa---------caacattaattggag |
22826149 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggat |
160 |
Q |
| |
|
|||| |||||||||||| |||| || | ||||||||||| ||||||||||||||||||| |
|
|
| T |
22826150 |
ctaaagtaacatcaatctttttattttcaccatcatattctatccatacctgcataggat |
22826209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 22922209 - 22922274
Alignment:
| Q |
247 |
atatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacgagtgtcaagctca |
312 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| |||||||||||| |||| |||||||| |||| |
|
|
| T |
22922209 |
atatctataccaacatggttatcattaatatcaccaaactcaaaatcttgaacagtgtcaaactca |
22922274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 22933386 - 22933322
Alignment:
| Q |
243 |
attgatatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacgagtgtcaa |
307 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||||||||||||||||| | |||| |||||||| |
|
|
| T |
22933386 |
attgatgtctataccaacatggttatcattaatatcatcaaactcaaagtcttgagcagtgtcaa |
22933322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 21150913 - 21150602
Alignment:
| Q |
1 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaactggag |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||| | |||||| | | ||||||||||||||| ||||| |
|
|
| T |
21150913 |
aatccaacatacatactattgttgagaactggagaaagatctttggtcaatgataacaaaggtcttgctggttttttattaaaaccaacactaattggag |
21150814 |
T |
|
| Q |
101 |
ctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
200 |
Q |
| |
|
|||| ||||||| |||| | ||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||| | || |||| |
|
|
| T |
21150813 |
ctaaagtaacattaatcttcttcttttcaccatcatattcaatccatacatgcataggatatccactgaaaagggataaatcattgaatccatcattatc |
21150714 |
T |
|
| Q |
201 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacga |
300 |
Q |
| |
|
||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | |
|
|
| T |
21150713 |
atcataatagcctgcagaagttgagttagctgatttcaaatcattgatatcaataccaacatggttattattgatatcatcaaactcaaaatcttgaaca |
21150614 |
T |
|
| Q |
301 |
gtgtcaagctca |
312 |
Q |
| |
|
|||||||||||| |
|
|
| T |
21150613 |
gtgtcaagctca |
21150602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 15628278 - 15628336
Alignment:
| Q |
232 |
gatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
290 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
15628278 |
gatttcaaaccattgatgtctataccaacatggttatcattaatatcatcaaacccaaa |
15628336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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