View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14437_high_10 (Length: 234)

Name: NF14437_high_10
Description: NF14437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14437_high_10
NF14437_high_10
[»] chr2 (29 HSPs)
chr2 (13-234)||(31175113-31175336)
chr2 (13-234)||(31211245-31211458)
chr2 (1-56)||(5574175-5574230)
chr2 (1-56)||(20504263-20504318)
chr2 (1-44)||(34248492-34248535)
chr2 (10-54)||(921845-921889)
chr2 (1-56)||(26003500-26003555)
chr2 (1-56)||(30902338-30902393)
chr2 (1-40)||(38594425-38594464)
chr2 (1-40)||(38598021-38598060)
chr2 (2-56)||(43426649-43426703)
chr2 (9-54)||(29771746-29771791)
chr2 (1-54)||(38465856-38465909)
chr2 (2-50)||(38618169-38618217)
chr2 (1-40)||(1981065-1981104)
chr2 (1-36)||(3887853-3887888)
chr2 (1-40)||(3887914-3887953)
chr2 (3-42)||(6336660-6336699)
chr2 (1-40)||(34248435-34248474)
chr2 (1-55)||(15859617-15859671)
chr2 (10-40)||(20504324-20504354)
chr2 (1-55)||(32630426-32630480)
chr2 (13-55)||(37396236-37396278)
chr2 (9-54)||(43514823-43514868)
chr2 (58-102)||(281238-281282)
chr2 (9-45)||(20195317-20195353)
chr2 (12-56)||(22373675-22373719)
chr2 (1-45)||(25278194-25278238)
chr2 (11-55)||(25668441-25668485)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-44)||(246872-246915)
scaffold0007 (1-40)||(246815-246854)
[»] chr7 (35 HSPs)
chr7 (1-56)||(25079227-25079282)
chr7 (1-40)||(25079288-25079327)
chr7 (1-40)||(38238865-38238904)
chr7 (2-56)||(27554518-27554572)
chr7 (1-52)||(716303-716354)
chr7 (1-56)||(22106687-22106742)
chr7 (1-56)||(34703508-34703563)
chr7 (1-56)||(40416971-40417026)
chr7 (1-56)||(40529609-40529664)
chr7 (1-40)||(46943964-46944003)
chr7 (2-40)||(7430965-7431003)
chr7 (9-55)||(27942353-27942399)
chr7 (10-56)||(38238813-38238859)
chr7 (1-40)||(4406437-4406476)
chr7 (1-40)||(18234426-18234465)
chr7 (1-40)||(22281463-22281502)
chr7 (1-56)||(29498803-29498858)
chr7 (1-56)||(45000666-45000721)
chr7 (2-40)||(1706854-1706892)
chr7 (13-55)||(21586880-21586922)
chr7 (13-55)||(23797414-23797456)
chr7 (10-56)||(24936598-24936644)
chr7 (2-40)||(43130254-43130292)
chr7 (2-40)||(46944018-46944056)
chr7 (1-50)||(27554568-27554617)
chr7 (9-54)||(37066210-37066255)
chr7 (1-50)||(41872122-41872171)
chr7 (1-38)||(45000621-45000658)
chr7 (10-55)||(46451004-46451049)
chr7 (9-54)||(46658799-46658844)
chr7 (12-40)||(716265-716293)
chr7 (12-56)||(1706898-1706942)
chr7 (12-40)||(22106748-22106776)
chr7 (12-40)||(36427748-36427776)
chr7 (12-40)||(40529575-40529603)
[»] chr4 (18 HSPs)
chr4 (1-56)||(52817632-52817687)
chr4 (10-56)||(5281200-5281246)
chr4 (1-56)||(5418580-5418635)
chr4 (1-40)||(13689556-13689595)
chr4 (1-56)||(24941131-24941186)
chr4 (1-40)||(55087792-55087831)
chr4 (2-39)||(10031517-10031554)
chr4 (1-40)||(5418535-5418574)
chr4 (13-55)||(3511741-3511783)
chr4 (13-55)||(18423924-18423966)
chr4 (14-56)||(40881492-40881534)
chr4 (9-55)||(42013174-42013220)
chr4 (9-55)||(51126133-51126179)
chr4 (1-46)||(6462732-6462777)
chr4 (13-50)||(24941182-24941219)
chr4 (9-54)||(25856077-25856122)
chr4 (9-54)||(30279207-30279252)
chr4 (10-54)||(9011812-9011856)
[»] chr3 (35 HSPs)
chr3 (1-56)||(42449125-42449180)
chr3 (1-48)||(33412485-33412532)
chr3 (1-48)||(33412538-33412585)
chr3 (1-40)||(36362685-36362724)
chr3 (1-56)||(50260953-50261008)
chr3 (2-40)||(52931754-52931792)
chr3 (1-40)||(22099799-22099838)
chr3 (1-40)||(22173815-22173854)
chr3 (1-40)||(51239324-51239363)
chr3 (1-40)||(51617351-51617390)
chr3 (1-56)||(52315410-52315465)
chr3 (1-40)||(52315471-52315510)
chr3 (1-55)||(37897702-37897756)
chr3 (12-56)||(41349725-41349769)
chr3 (1-40)||(21403917-21403955)
chr3 (13-56)||(21403961-21404004)
chr3 (1-56)||(29512196-29512251)
chr3 (1-56)||(38455185-38455240)
chr3 (1-40)||(38455246-38455285)
chr3 (1-56)||(51617396-51617451)
chr3 (1-40)||(52168303-52168342)
chr3 (1-56)||(52168348-52168403)
chr3 (2-40)||(3972489-3972527)
chr3 (2-40)||(3994567-3994605)
chr3 (2-40)||(3997351-3997389)
chr3 (2-56)||(17552542-17552596)
chr3 (12-54)||(19843949-19843991)
chr3 (3-53)||(29241548-29241598)
chr3 (9-55)||(42595803-42595849)
chr3 (14-56)||(52931674-52931716)
chr3 (2-50)||(22153130-22153178)
chr3 (1-53)||(24075513-24075565)
chr3 (12-40)||(29512162-29512190)
chr3 (12-40)||(52931722-52931750)
chr3 (9-45)||(54680517-54680553)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-50)||(54408-54457)
[»] chr6 (22 HSPs)
chr6 (1-50)||(17773572-17773621)
chr6 (1-56)||(21506528-21506583)
chr6 (1-40)||(21998120-21998159)
chr6 (1-56)||(17773521-17773576)
chr6 (1-40)||(21506483-21506522)
chr6 (1-56)||(30460678-30460733)
chr6 (2-56)||(11746293-11746347)
chr6 (1-50)||(28577672-28577721)
chr6 (1-40)||(30397745-30397784)
chr6 (9-55)||(10731501-10731547)
chr6 (1-55)||(12383655-12383709)
chr6 (1-47)||(13281554-13281600)
chr6 (2-56)||(17268034-17268088)
chr6 (2-56)||(31714600-31714654)
chr6 (1-55)||(34170098-34170152)
chr6 (12-49)||(4844320-4844357)
chr6 (2-55)||(14173456-14173509)
chr6 (2-55)||(14177992-14178045)
chr6 (10-55)||(15467602-15467647)
chr6 (1-37)||(4844359-4844395)
chr6 (12-56)||(21998070-21998114)
chr6 (12-40)||(30397805-30397833)
[»] chr8 (24 HSPs)
chr8 (1-56)||(14381258-14381313)
chr8 (1-56)||(40098825-40098880)
chr8 (1-50)||(14381309-14381358)
chr8 (1-40)||(1739646-1739685)
chr8 (1-56)||(26014589-26014644)
chr8 (1-36)||(40098780-40098815)
chr8 (1-55)||(5888402-5888456)
chr8 (2-40)||(13211320-13211358)
chr8 (2-55)||(9015882-9015935)
chr8 (2-50)||(37716145-37716193)
chr8 (1-40)||(7377574-7377613)
chr8 (1-40)||(9056041-9056080)
chr8 (1-56)||(9056086-9056141)
chr8 (1-56)||(11692068-11692122)
chr8 (12-55)||(29916197-29916240)
chr8 (1-40)||(33574868-33574907)
chr8 (1-55)||(10117036-10117090)
chr8 (10-56)||(13228935-13228981)
chr8 (1-55)||(45045443-45045497)
chr8 (2-55)||(3225801-3225854)
chr8 (9-54)||(34194588-34194633)
chr8 (12-40)||(7377635-7377663)
chr8 (1-45)||(9808394-9808438)
chr8 (22-54)||(42795136-42795168)
[»] chr5 (37 HSPs)
chr5 (1-56)||(3851383-3851438)
chr5 (1-56)||(23914861-23914916)
chr5 (1-56)||(26300131-26300186)
chr5 (1-56)||(37944622-37944677)
chr5 (1-56)||(11262348-11262403)
chr5 (1-56)||(13157353-13157408)
chr5 (1-56)||(15712186-15712241)
chr5 (1-56)||(19531366-19531421)
chr5 (1-56)||(42013842-42013897)
chr5 (1-55)||(71279-71333)
chr5 (3-55)||(3100471-3100523)
chr5 (1-40)||(8961300-8961339)
chr5 (13-56)||(13311206-13311249)
chr5 (1-40)||(15712141-15712180)
chr5 (1-40)||(19531321-19531360)
chr5 (9-40)||(26300192-26300223)
chr5 (1-40)||(37944683-37944722)
chr5 (1-40)||(42013903-42013942)
chr5 (1-40)||(43446879-43446918)
chr5 (1-55)||(11795756-11795810)
chr5 (2-40)||(13311255-13311293)
chr5 (1-55)||(14153389-14153443)
chr5 (9-55)||(15965984-15966030)
chr5 (10-56)||(21945445-21945491)
chr5 (58-96)||(35907843-35907881)
chr5 (9-55)||(35969069-35969115)
chr5 (9-54)||(7581413-7581458)
chr5 (9-50)||(29807106-29807147)
chr5 (9-54)||(31787285-31787330)
chr5 (12-40)||(11172060-11172088)
chr5 (12-56)||(12165349-12165393)
chr5 (10-54)||(12891355-12891399)
chr5 (9-45)||(14064886-14064922)
chr5 (9-53)||(22584300-22584344)
chr5 (22-54)||(35907873-35907905)
chr5 (1-40)||(35969148-35969188)
chr5 (3-55)||(43340437-43340489)
[»] chr1 (36 HSPs)
chr1 (1-56)||(639819-639874)
chr1 (1-56)||(31008279-31008334)
chr1 (1-56)||(33604056-33604111)
chr1 (1-56)||(48022615-48022670)
chr1 (1-56)||(8258008-8258063)
chr1 (1-40)||(31008340-31008379)
chr1 (1-40)||(37734854-37734893)
chr1 (10-56)||(3384288-3384334)
chr1 (13-55)||(42761485-42761527)
chr1 (1-37)||(6065481-6065517)
chr1 (1-56)||(2352960-2353015)
chr1 (1-40)||(3384243-3384282)
chr1 (1-40)||(4060252-4060291)
chr1 (1-56)||(5856422-5856477)
chr1 (1-40)||(6065542-6065581)
chr1 (1-40)||(19175669-19175708)
chr1 (1-40)||(27206779-27206818)
chr1 (1-40)||(27206840-27206879)
chr1 (1-40)||(35367559-35367598)
chr1 (3-54)||(41621312-41621363)
chr1 (2-40)||(2352916-2352954)
chr1 (9-55)||(15278593-15278639)
chr1 (9-55)||(31909777-31909823)
chr1 (13-55)||(35049964-35050006)
chr1 (10-40)||(36535718-36535748)
chr1 (9-54)||(37255154-37255199)
chr1 (13-54)||(38824358-38824399)
chr1 (7-56)||(47599933-47599982)
chr1 (1-37)||(2349776-2349812)
chr1 (12-40)||(2349837-2349865)
chr1 (1-57)||(4060191-4060247)
chr1 (10-46)||(12447529-12447565)
chr1 (12-40)||(23944068-23944096)
chr1 (10-54)||(34598929-34598973)
chr1 (10-54)||(45925273-45925317)
chr1 (1-45)||(52923399-52923443)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-45)||(120221-120265)
scaffold0024 (10-40)||(120174-120204)
[»] scaffold0340 (1 HSPs)
scaffold0340 (9-55)||(14061-14107)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-40)||(61243-61282)
scaffold0047 (12-40)||(61194-61222)
[»] scaffold0111 (2 HSPs)
scaffold0111 (9-54)||(38074-38119)
scaffold0111 (13-53)||(38385-38425)
[»] scaffold0236 (1 HSPs)
scaffold0236 (10-54)||(13724-13768)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 31175113 - 31175336
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattatatca---attgaatgaacctttaaaataaaaatttgtttataattgataacgtagttt 109  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||   ||||||||||| |  ||||||||||||||||||||||||||||| ||||||    
T  31175113 ttttagattcattcaattaatgatgtatctgatctatattacatcatcaattgaatgaac-taaaaaataaaaatttgtttataattgataacatagttt 31175211  T
Q  110 attgaagttgacaaagccttatgtttttacttataaattcaaacattttcttagttggtacattgtaaacaataaaaaacatggctaaaattctcaaata 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31175212 attgaagttgacaaagccttatgtttttacttataaattcaaacattttctcagttggtacattgtaaacaataaaaaacatggctaaaattctcaaata 31175311  T
Q  210 cgttcatgttatattcatctttcta 234  Q
    |||||| ||||| ||||||||||||    
T  31175312 cgttcaagttatgttcatctttcta 31175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 31211245 - 31211458
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattatatca---attgaatgaacctttaaaataaaaatttgtttataattgataacgtagttt 109  Q
    |||||||| |||||||||||| ||||||||||||||||||| | ||   ||| ||| |||||  || || |||| |||||||||||||||||| |||||     
T  31211245 ttttagattcattcaattaataatgtatctgatctatattacaccattaattaaataaacctaaaacatcaaaaattgtttataattgataacatagtt- 31211343  T
Q  110 attgaagttgacaaagccttatgtttttacttataaattcaaacattttcttagttggtacattgtaaacaataaaaaacatggctaaaattctcaaata 209  Q
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||    
T  31211344 ----------acaaagccttatgtttttacttataaattcaaacattttctttgttggtacattgtaaacaattaaaaacatggctaaaattcttaaata 31211433  T
Q  210 cgttcatgttatattcatctttcta 234  Q
    |||||||||||| ||||||||||||    
T  31211434 cgttcatgttatgttcatctttcta 31211458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5574230 - 5574175
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||    
T  5574230 caaaaatctactttttagatacattcaattaatgatgtatgtggtctttattatat 5574175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20504263 - 20504318
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||||||||||||| |||||||||||||||||| | |||| ||||||||    
T  20504263 caaaaatctactttttagatatattcaattaatgatgtatataatctttattatat 20504318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34248535 - 34248492
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctga 44  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  34248535 caaaaatccactttttagatacattcaattaatgatgtatctga 34248492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 921845 - 921889
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  921845 actttttagattcattcaattaatgatgtatgtgatctatattat 921889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26003555 - 26003500
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||| |||||||| ||||||||||||||||||| || ||| ||||||||    
T  26003555 caaaaatctacattttagattcattcaattaatgatgtatatggtctttattatat 26003500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30902393 - 30902338
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| |||||||||||||||||||||||||||| ||| || ||| ||||||||    
T  30902393 caaaaatttactttttagatacattcaattaatgatatatgtggtctttattatat 30902338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38594464 - 38594425
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  38594464 caaaaatctattttttagatacattcaattaatgatgtat 38594425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38598060 - 38598021
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  38598060 caaaaatctattttttagatacattcaattaatgatgtat 38598021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 43426649 - 43426703
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| |||||||| |||||||||||||||||||||| || ||| ||||||||    
T  43426649 aaaaatccactttttaaatacattcaattaatgatgtatgtggtctttattatat 43426703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 29771746 - 29771791
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||    
T  29771746 tactttttagattcattcaattaatgatgtatgtgatccatattat 29771791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38465909 - 38465856
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||| |||||||| ||||||||||||||||||| || ||| ||||||    
T  38465909 caaaaatctacattttagattcattcaattaatgatgtatatggtctttattat 38465856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 38618217 - 38618169
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    ||||||||| || |||||||||||||||||||||||||| |||| ||||    
T  38618217 aaaaatctatttgttagatacattcaattaatgatgtatgtgatatata 38618169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1981104 - 1981065
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  1981104 caaaaatctcatttttagatacattcaattaatgatgtat 1981065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 3887853 - 3887888
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgat 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  3887853 caaaaatctattttttagatacattcaattaatgat 3887888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3887953 - 3887914
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  3887953 caaaaatcatctttttagatacattcaattaatgatgtat 3887914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 6336699 - 6336660
Alignment:
Q  3 aaaatctactttttagatacattcaattaatgatgtatct 42  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  6336699 aaaatctactttttagattcattcaataaatgatgtatct 6336660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34248435 - 34248474
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  34248435 caaaaattcactttttagatacattcaattaatgatgtat 34248474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15859671 - 15859617
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||| | |||||||    
T  15859671 caaaaatctatattttagattcattcaattaatgatgtatatgatatttattata 15859617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 20504354 - 20504324
Alignment:
Q  10 actttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||||    
T  20504354 actttttagatacattcaattaatgatgtat 20504324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32630426 - 32630480
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||| |||| ||| ||||||||||||||||||| || ||| |||||||    
T  32630426 caaaaatctacattttggattcattcaattaatgatgtatatggtctttattata 32630480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 37396236 - 37396278
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| ||||||||||||||||||| |||| |||||||||    
T  37396236 ttttagattcattcaattaatgatgtatatgatttatattata 37396278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 43514868 - 43514823
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||| | ||||||||||||||||||| || ||||||||||    
T  43514868 tactttttaggttcattcaattaatgatgtatatggtctatattat 43514823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 281282 - 281238
Alignment:
Q  58 aattgaatgaacctttaaaataaaaatttgtttataattgataac 102  Q
    ||||||||||||||  ||||| ||||||| |||||||||||||||    
T  281282 aattgaatgaacctaaaaaatcaaaatttatttataattgataac 281238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 20195317 - 20195353
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgat 45  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  20195317 tactttttagattcattcaattaatgatgtatgtgat 20195353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 22373719 - 22373675
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||| |||||||||||| || ||| ||||||||    
T  22373719 tttttagatacattcagttaatgatgtatgtggtctttattatat 22373675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25278194 - 25278238
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgat 45  Q
    ||||||| ||| ||||||||||||| |||||||||||||| ||||    
T  25278194 caaaaatttaccttttagatacatttaattaatgatgtatgtgat 25278238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 25668441 - 25668485
Alignment:
Q  11 ctttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| | ||||||||||||||||||| ||||| ||||||||    
T  25668441 ctttttaggttcattcaattaatgatgtatgtgatccatattata 25668485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 246915 - 246872
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctga 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  246915 caaaaatctactttttagatacattcaattaatgatgtatctga 246872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 246815 - 246854
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  246815 caaaaatttactttttagatacattcaattaatgatgtat 246854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25079227 - 25079282
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  25079227 caaaaatctactttttagatacattcaattaatgatgtatgtgatccttattatat 25079282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25079327 - 25079288
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25079327 caaaaatctactttttagatacattcaattaatgatgtat 25079288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38238904 - 38238865
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38238904 caaaaatctactttttagatacattcaattaatgatgtat 38238865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 27554518 - 27554572
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||| || ||||||||||||||||||||||||||||| |||||| ||||||||    
T  27554518 aaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatat 27554572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 716354 - 716303
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatatt 52  Q
    ||||||| || ||||||||||||||||||||||||||||| |||||| ||||    
T  716354 caaaaatttaatttttagatacattcaattaatgatgtatgtgatctttatt 716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22106687 - 22106742
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||| |||||||||| |||||||||||||||||| || ||| ||||||||    
T  22106687 caaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatat 22106742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34703563 - 34703508
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  34703563 caaaaattcactttttagatacattcaattaatgatgtatatggtctttattatat 34703508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40417026 - 40416971
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  40417026 caaaaattcactttttagatacattcaattaatgatgtatatggtctttattatat 40416971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40529664 - 40529609
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||| |||||||||| |||||||||||||||||| || ||| ||||||||    
T  40529664 caaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatat 40529609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 46943964 - 46944003
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  46943964 caaaaatccactttttagatacattcaattaatgatgtat 46944003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 7431003 - 7430965
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7431003 aaaaaactactttttagatacattcaattaatgatgtat 7430965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 27942353 - 27942399
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  27942353 tactttttagattcattcaattaatgatgtatatgatccatattata 27942399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 38238813 - 38238859
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  38238813 actttttagatacattcaattaatgatgtatgtggtctttattatat 38238859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4406437 - 4406476
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  4406437 caaaaattcactttttagatacattcaattaatgatgtat 4406476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18234465 - 18234426
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  18234465 caaaaatttaatttttagatacattcaattaatgatgtat 18234426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22281463 - 22281502
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  22281463 caaaaatctaatttttagatatattcaattaatgatgtat 22281502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29498803 - 29498858
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| || ||||||||| |||||||||||||||||| || ||| ||||||||    
T  29498803 caaaaatccacattttagatatattcaattaatgatgtatgtggtctttattatat 29498858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45000721 - 45000666
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| ||||||||||| |||||||||| ||||||||| || ||| ||||||||    
T  45000721 caaaaatgtactttttagacacattcaattgatgatgtatgtggtctttattatat 45000666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 1706854 - 1706892
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||| || |||||||||||||||||||||||||||||    
T  1706854 aaaaatttattttttagatacattcaattaatgatgtat 1706892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 21586922 - 21586880
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| ||||||||||||||||||| |||||| |||||||    
T  21586922 ttttagattcattcaattaatgatgtatatgatctttattata 21586880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 23797456 - 23797414
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| |||||||||||||||||||||| ||| |||||||    
T  23797456 ttttagattcattcaattaatgatgtatctggtctttattata 23797414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 24936644 - 24936598
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||| |||||||||||||||||| || ||| ||||||||    
T  24936644 actttttagatatattcaattaatgatgtatgtggtctttattatat 24936598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 43130254 - 43130292
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  43130254 aaaaatctacgttttagattcattcaattaatgatgtat 43130292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 46944056 - 46944018
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||| || |||||||||||||||||||||||||||||    
T  46944056 aaaaatttaatttttagatacattcaattaatgatgtat 46944018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27554617 - 27554568
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    ||||||| ||||||| | |||||||||||||||||||||| |||| ||||    
T  27554617 caaaaatttacttttaaaatacattcaattaatgatgtatgtgatatata 27554568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 37066210 - 37066255
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||| | ||||||||||||||||||| || ||||||||||    
T  37066210 tactttttaggttcattcaattaatgatgtatgtggtctatattat 37066255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41872171 - 41872122
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    ||||||||||| |||||||| |||||| |||||||||||| || ||||||    
T  41872171 caaaaatctacattttagattcattcatttaatgatgtatgtggtctata 41872122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45000621 - 45000658
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgt 38  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  45000621 caaaaatctattttctagatacattcaattaatgatgt 45000658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 46451004 - 46451049
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||| | ||||||||||||||||||| |||| |||||||||    
T  46451004 actttttaggttcattcaattaatgatgtatgtgatttatattata 46451049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 46658844 - 46658799
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||||| ||||||||||||||||||| || || |||||||    
T  46658844 tactttttagattcattcaattaatgatgtatgtgttccatattat 46658799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 716265 - 716293
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  716265 tttttagatacattcaattaatgatgtat 716293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 1706942 - 1706898
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||| |||||||||||| || ||| ||||||||    
T  1706942 tttttagatacattcatttaatgatgtatatggtctttattatat 1706898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 22106776 - 22106748
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  22106776 tttttagatacattcaattaatgatgtat 22106748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 36427776 - 36427748
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  36427776 tttttagatacattcaattaatgatgtat 36427748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 40529575 - 40529603
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  40529575 tttttagatacattcaattaatgatgtat 40529603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52817687 - 52817632
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  52817687 caaaaatccactttttagatacattcaattaatgatgtatgtgatctttattatat 52817632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 5281246 - 5281200
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  5281246 actttttagatacattcaattaatgatgtatgtgatctttattatat 5281200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5418635 - 5418580
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| ||||||||||||||||| |||||||||||||| || ||| ||||||||    
T  5418635 caaaaatttactttttagatacattgaattaatgatgtatgtggtctttattatat 5418580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13689556 - 13689595
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  13689556 caaaaatctattttttagatacattcaattaatgatgtat 13689595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24941131 - 24941186
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  24941131 caaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatat 24941186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 55087831 - 55087792
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  55087831 caaaaatctaatttttagatacattcaattaatgatgtat 55087792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 10031517 - 10031554
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgta 39  Q
    |||||| |||||||||||||||||||||||||||||||    
T  10031517 aaaaatttactttttagatacattcaattaatgatgta 10031554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5418535 - 5418574
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  5418535 caaaaatcaattttttagatacattcaattaatgatgtat 5418574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 3511741 - 3511783
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| ||||||||||||||||||| |||||| |||||||    
T  3511741 ttttagattcattcaattaatgatgtatatgatctttattata 3511783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 18423924 - 18423966
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| ||||||||||||||||||| |||||| |||||||    
T  18423924 ttttagattcattcaattaatgatgtatatgatctttattata 18423966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 40881534 - 40881492
Alignment:
Q  14 tttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||    
T  40881534 tttagattcattcaattaatgatgtatatgatctttattatat 40881492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 42013174 - 42013220
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||| || ||||||||||||||||||| || |||||||||||    
T  42013174 tactttttaaattcattcaattaatgatgtatgtggtctatattata 42013220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 51126133 - 51126179
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||| | ||||||||||||||||||| || |||||||||||    
T  51126133 tactttttaggttcattcaattaatgatgtatgtggtctatattata 51126179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6462732 - 6462777
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatc 46  Q
    |||||||||||||||||| | |||||||| |||||||||| |||||    
T  6462732 caaaaatctactttttaggttcattcaataaatgatgtatgtgatc 6462777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 24941219 - 24941182
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctata 50  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  24941219 ttttagatacattcaattaatgatgtatttgatatata 24941182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 25856122 - 25856077
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||| | ||||||||||||||||||| || ||||||||||    
T  25856122 tactttttaggttcattcaattaatgatgtatgtggtctatattat 25856077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 30279252 - 30279207
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||| | ||||||||||||||||||| || ||||||||||    
T  30279252 tactttttaggttcattcaattaatgatgtatgtggtctatattat 30279207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 9011856 - 9011812
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||| |||||| |||||||||||| || ||||||||||    
T  9011856 actttttagattcattcatttaatgatgtatgtggtctatattat 9011812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42449125 - 42449180
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  42449125 caaaaatccactttttagatacattcaattaatgatgtatgtgatctttattatat 42449180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33412485 - 33412532
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatcta 48  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  33412485 caaaaatccactttttagatacattcaattaatgatgtatgtgatcta 33412532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33412585 - 33412538
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatcta 48  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  33412585 caaaaatccactttttagatacattcaattaatgatgtatgtgatcta 33412538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36362724 - 36362685
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36362724 caaaaatctactttttagatacattcaattaatgatgtat 36362685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50260953 - 50261008
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  50260953 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 50261008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 52931792 - 52931754
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52931792 aaaaatctactttttagatacattcaattaatgatgtat 52931754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22099799 - 22099838
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  22099799 caaaaatctactttttagatacattcaattaataatgtat 22099838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22173815 - 22173854
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  22173815 caaaaatctacattttagatacattcaattaatgatgtat 22173854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 51239363 - 51239324
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  51239363 caaaaatctattttttagatacattcaattaatgatgtat 51239324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 51617351 - 51617390
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  51617351 caaaaatccactttttagatacattcaattaatgatgtat 51617390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52315410 - 52315465
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||||||| |||||||||||||||||| || ||| ||||||||    
T  52315410 caaaaatccactttttagatatattcaattaatgatgtatgtggtctttattatat 52315465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 52315510 - 52315471
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  52315510 caaaaatccactttttagatacattcaattaatgatgtat 52315471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37897702 - 37897756
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||||| |||||||    
T  37897702 caaaaatctaaattttagattcattcaattaatgatgtatatgatctttattata 37897756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 41349769 - 41349725
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||    
T  41349769 tttttagatacattcaattaatgatgtatgtggtctttattatat 41349725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21403917 - 21403955
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  21403917 caaaaatctactttttagata-attcaattaatgatgtat 21403955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 21404004 - 21403961
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||||||||||||||| || ||| ||||||||    
T  21404004 ttttagatacattcaattaatgatgtatgtggtctttattatat 21403961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29512251 - 29512196
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| || |||||||||||||| |||||||||||||| || ||| ||||||||    
T  29512251 caaaaatttattttttagatacatttaattaatgatgtatgtggtctttattatat 29512196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38455185 - 38455240
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||||||||||| | |||||||||||| || ||| ||||||||    
T  38455185 caaaaatccactttttagatacattaatttaatgatgtatgtggtctttattatat 38455240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38455285 - 38455246
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  38455285 caaaaatttactttttagatacatttaattaatgatgtat 38455246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 51617451 - 51617396
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||| || ||||||||||||||||||||||||| ||||| || ||| ||||||||    
T  51617451 caaaattccactttttagatacattcaattaatgttgtatgtggtctttattatat 51617396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 52168303 - 52168342
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  52168303 caaaaatttactttttagatacatttaattaatgatgtat 52168342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52168403 - 52168348
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||||||||||| | |||||||||||| || ||| ||||||||    
T  52168403 caaaaatccactttttagatacattaatttaatgatgtatgtggtctttattatat 52168348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 3972489 - 3972527
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  3972489 aaaaatctacattttagattcattcaattaatgatgtat 3972527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 3994605 - 3994567
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  3994605 aaaaatctacattttagattcattcaattaatgatgtat 3994567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 3997389 - 3997351
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  3997389 aaaaatctacattttagattcattcaattaatgatgtat 3997351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 17552596 - 17552542
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| |||||||| |||||||||||||| ||||||| || ||| ||||||||    
T  17552596 aaaaatccactttttaaatacattcaattaacgatgtatgtggtctttattatat 17552542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 19843949 - 19843991
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||| || ||||||||||||||||||||||| |||||||||    
T  19843949 tttttaaattcattcaattaatgatgtatctgacctatattat 19843991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 29241598 - 29241548
Alignment:
Q  3 aaaatctactttttagatacattcaattaatgatgtatctgatctatatta 53  Q
    |||||| ||||||||||| |||||||| |||||||||| || |||||||||    
T  29241598 aaaatcaactttttagattcattcaataaatgatgtatttggtctatatta 29241548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 42595849 - 42595803
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||||| ||||||||||||||||||| || || ||||||||    
T  42595849 tactttttagattcattcaattaatgatgtatgtggtccatattata 42595803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 52931674 - 52931716
Alignment:
Q  14 tttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||||||||||||||||||| || ||| ||||||||    
T  52931674 tttagatacattcaattaatgatgtatgtggtctttattatat 52931716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 22153178 - 22153130
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    |||||| ||||||||||||||||| ||||||| |||||| |||| ||||    
T  22153178 aaaaatttactttttagatacatttaattaataatgtatatgatatata 22153130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24075565 - 24075513
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatatta 53  Q
    ||||||||||| |||||||| ||||||||| ||||||||| || ||| |||||    
T  24075565 caaaaatctacattttagattcattcaattcatgatgtatatgctctttatta 24075513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 29512162 - 29512190
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  29512162 tttttagatacattcaattaatgatgtat 29512190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 52931750 - 52931722
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  52931750 tttttagatacattcaattaatgatgtat 52931722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 54680517 - 54680553
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgat 45  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  54680517 tactttttaggtacattcaattaatgatgtatgtgat 54680553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54408 - 54457
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  54408 caaaaatctactttttagatacattcaattaatgatgtatatgatatata 54457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17773621 - 17773572
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  17773621 caaaaatctactttttagatacattcaattaatgatgtatgtgatatata 17773572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21506583 - 21506528
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| || ||||||||||||||||||||||||||||| |||||| ||||||||    
T  21506583 caaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattatat 21506528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21998159 - 21998120
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21998159 caaaaatctactttttagatacattcaattaatgatgtat 21998120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17773521 - 17773576
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||||||||||||||| |||||||||| || ||| ||||||||    
T  17773521 caaaaatccactttttagatacattcaataaatgatgtatgtggtctttattatat 17773576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21506483 - 21506522
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21506483 caaaaatccactttttagatacattcaattaatgatgtat 21506522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30460733 - 30460678
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| ||||||||||||| |||||||||||||||||| || ||| ||||||||    
T  30460733 caaaaatttactttttagatagattcaattaatgatgtatgtggtctttattatat 30460678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 11746347 - 11746293
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||| ||| |||||||| ||||||||||||||||||| |||||| ||||||||    
T  11746347 aaaaatttacattttagattcattcaattaatgatgtatatgatctttattatat 11746293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28577721 - 28577672
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||| ||||    
T  28577721 caaaaatatactttttagatacattcaattaataatgtatgtgatatata 28577672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30397745 - 30397784
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  30397745 caaaaatccacattttagatacattcaattaatgatgtat 30397784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 10731501 - 10731547
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||| | |||||| |||||||||||| ||||||||||||||    
T  10731501 tactttttaggttcattcatttaatgatgtatgtgatctatattata 10731547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12383709 - 12383655
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||| ||||||||  |||||||||||||||||  |||||| |||||||    
T  12383709 caaaaatctacattttagattaattcaattaatgatgtacatgatctttattata 12383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13281554 - 13281600
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatct 47  Q
    ||||||||||  |||||||| ||||||||||||||||||| ||||||    
T  13281554 caaaaatctagattttagattcattcaattaatgatgtatatgatct 13281600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 17268034 - 17268088
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||| |||||| ||||||| |||||||||||||| || ||| ||||||||    
T  17268034 aaaaatctattttttaaatacatttaattaatgatgtatgtggtctttattatat 17268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 31714654 - 31714600
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||| |||||| | ||||||||||||||||||| |||| | ||||||||    
T  31714654 aaaaatctacattttaggttcattcaattaatgatgtatatgatatttattatat 31714600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34170098 - 34170152
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| || |||||||| |||||| | |||||||||| ||||||||||||||    
T  34170098 caaaaatcaacattttagattcattcattaaatgatgtatgtgatctatattata 34170152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 4844320 - 4844357
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctat 49  Q
    ||||||||||||||||||||||||||||| || |||||    
T  4844320 tttttagatacattcaattaatgatgtatgtggtctat 4844357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 14173509 - 14173456
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||||| |||||| |||||||| |||||||||| || || ||||||||    
T  14173509 aaaaatctacttcttagattcattcaataaatgatgtatgtggtcaatattata 14173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 14178045 - 14177992
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||||| |||||| |||||||| |||||||||| || || ||||||||    
T  14178045 aaaaatctacttcttagattcattcaataaatgatgtatgtggtcaatattata 14177992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 15467602 - 15467647
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||| |||| ||||| |||||||| ||||||||||||||    
T  15467602 actttttagattcatttaattattgatgtatgtgatctatattata 15467647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4844395 - 4844359
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatg 37  Q
    |||||||  ||||||||||||||||||||||||||||    
T  4844395 caaaaattcactttttagatacattcaattaatgatg 4844359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 21998070 - 21998114
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||||||||| |||||| |||| | ||||||||    
T  21998070 tttttagatacattcaattaataatgtatgtgatatttattatat 21998114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 30397833 - 30397805
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  30397833 tttttagatacattcaattaatgatgtat 30397805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14381258 - 14381313
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  14381258 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 14381313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40098880 - 40098825
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  40098880 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 40098825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14381358 - 14381309
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  14381358 caaaaatccactttttagatacattcaattaatgatgtatgtgatatata 14381309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1739685 - 1739646
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  1739685 caaaaatttactttttagatacattcaattaatgatgtat 1739646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26014589 - 26014644
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  26014589 caaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatat 26014644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 40098780 - 40098815
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgat 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  40098780 caaaaatctactttttagatacattcaattaatgat 40098815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5888456 - 5888402
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||||||| ||||| ||||||||||||||||||| || ||| |||||||    
T  5888456 caaaaatctactttgtagattcattcaattaatgatgtatatggtctttattata 5888402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 13211358 - 13211320
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  13211358 aaaaatctattttttagatacattcaattaatgatgtat 13211320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 9015935 - 9015882
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||  |||||||| ||||||||||||||||||| |||||| |||||||    
T  9015935 aaaaatctatattttagattcattcaattaatgatgtatatgatctttattata 9015882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 37716193 - 37716145
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctata 50  Q
    |||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  37716193 aaaaatttattttttagatacattcaattaatgatgtatgtgatatata 37716145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7377574 - 7377613
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  7377574 caaaaattcactttttagatacattcaattaatgatgtat 7377613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9056041 - 9056080
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  9056041 caaaaattcactttttagatacattcaattaatgatgtat 9056080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9056141 - 9056086
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  |||||||||||||||| |||||||||||||| || ||| ||||||||    
T  9056141 caaaaattcactttttagatacatttaattaatgatgtatgtggtctttattatat 9056086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11692068 - 11692122
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||||| ||||| |||||||||||||| |||||| ||||||||    
T  11692068 caaaaatccactttttagacacatt-aattaatgatgtatgtgatctttattatat 11692122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 29916240 - 29916197
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  29916240 tttttagattcattcaattgatgatgtatatgatctatattata 29916197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33574907 - 33574868
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  33574907 caaaaatccacattttagatacattcaattaatgatgtat 33574868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10117090 - 10117036
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||| ||| |||||||| ||||||||||||||||||| |||| | |||||||    
T  10117090 caaaaatttacattttagattcattcaattaatgatgtatatgatatttattata 10117036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 13228981 - 13228935
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||| |||||||||||||| || ||| ||||||||    
T  13228981 actttttagatacatttaattaatgatgtatgtggtctttattatat 13228935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45045497 - 45045443
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||  |||||||| ||||||||||||||||||| || ||| |||||||    
T  45045497 caaaaatctatattttagattcattcaattaatgatgtatatggtctttattata 45045443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 3225801 - 3225854
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||| ||||| ||  |||||||||||||||||| |||||| |||||||    
T  3225801 aaaaatctacattttaaatttattcaattaatgatgtatatgatctttattata 3225854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 34194588 - 34194633
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||||| ||||||||||||||||||| || || |||||||    
T  34194588 tactttttagattcattcaattaatgatgtatgtggtccatattat 34194633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 7377663 - 7377635
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  7377663 tttttagatacattcaattaatgatgtat 7377635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9808394 - 9808438
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgat 45  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||    
T  9808394 caaaaatttactttttatatacattcaattaatggtgtatgtgat 9808438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 42795136 - 42795168
Alignment:
Q  22 cattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||||||||||| |||||||||||||    
T  42795136 cattcaattaatgatgtatgtgatctatattat 42795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3851383 - 3851438
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  3851383 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 3851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23914861 - 23914916
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  23914861 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 23914916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26300131 - 26300186
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||    
T  26300131 caaaaatttactttttagatacattcaattaatgatgtatgtggtctttattatat 26300186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37944622 - 37944677
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  37944622 caaaaattcactttttagatacattcaattaatgatgtatgtgatctttattatat 37944677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11262348 - 11262403
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  11262348 caaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatat 11262403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13157353 - 13157408
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||||||| |||||||||||||||||| || ||| ||||||||    
T  13157353 caaaaatccactttttagatatattcaattaatgatgtatatggtctttattatat 13157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15712241 - 15712186
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||| |||||||||||||||||||||| || ||| ||||||||    
T  15712241 caaaaatcaactttttaaatacattcaattaatgatgtatgtggtctttattatat 15712186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19531421 - 19531366
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  19531421 caaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatat 19531366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42013842 - 42013897
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  42013842 caaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatat 42013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 71279 - 71333
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||||| |||||||    
T  71279 caaaaatctatattttagattcattcaattaatgatgtatatgatctttattata 71333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 3100523 - 3100471
Alignment:
Q  3 aaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||| ||| |||||||| ||||||||||||||||||| |||||| |||||||    
T  3100523 aaaatttacattttagattcattcaattaatgatgtatatgatctttattata 3100471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8961339 - 8961300
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  8961339 caaaaatctactgtttaaatacattcaattaatgatgtat 8961300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 13311206 - 13311249
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||||||||||||||||||||||| || ||| ||||||||    
T  13311206 ttttagatacattcaattaatgatgtatgtggtctttattatat 13311249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15712141 - 15712180
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  15712141 caaaaatccattttttagatacattcaattaatgatgtat 15712180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19531321 - 19531360
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  19531321 caaaaattcactttttagatacattcaattaatgatgtat 19531360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 26300223 - 26300192
Alignment:
Q  9 tactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||||||||||||||    
T  26300223 tactttttagatacattcaattaatgatgtat 26300192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37944722 - 37944683
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  37944722 caaaaatttattttttagatacattcaattaatgatgtat 37944683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 42013942 - 42013903
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  42013942 caaaaattcactttttagatacattcaattaatgatgtat 42013903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 43446879 - 43446918
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  43446879 caaaaatttactttttagatacatttaattaatgatgtat 43446918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11795756 - 11795810
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| || |||||||| ||||||||||||||||||| || ||| |||||||    
T  11795756 caaaaatcaacattttagattcattcaattaatgatgtatatggtctttattata 11795810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 13311293 - 13311255
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  13311293 aaaaatctatcttttagatacattcaattaatgatgtat 13311255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14153389 - 14153443
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||||||||||||||| || |||||| ||||||||| || |||||| |||||||    
T  14153389 caaaaatctactttttatattcattcatttaatgatgcatatgatctttattata 14153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 15965984 - 15966030
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||| | ||||||||||||||||||| || |||||||||||    
T  15965984 tactttttaggttcattcaattaatgatgtatgtggtctatattata 15966030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 21945491 - 21945445
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| |||| ||||||||||||||||||||| ||| ||||||||    
T  21945491 acttttttgatatattcaattaatgatgtatctggtctttattatat 21945445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 35907881 - 35907843
Alignment:
Q  58 aattgaatgaacctttaaaataaaaatttgtttataatt 96  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  35907881 aattgaatgaaccttaaaaatcaaaatttgtttataatt 35907843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 35969069 - 35969115
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||||| |||| |||||||||||||| || |||||||||||    
T  35969069 tactttttagattcatttaattaatgatgtatgtggtctatattata 35969115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 7581413 - 7581458
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||||| |||||| ||||| |||||| |||||||||||||    
T  7581413 tactttttagattcattcatttaataatgtatgtgatctatattat 7581458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 29807106 - 29807147
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctata 50  Q
    |||||||||||| ||||||||||||||||||| || ||||||    
T  29807106 tactttttagattcattcaattaatgatgtatgtggtctata 29807147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 31787330 - 31787285
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||| | ||||||||||||||||||| ||||| |||||||    
T  31787330 tactttttagcttcattcaattaatgatgtatgtgatccatattat 31787285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 11172088 - 11172060
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  11172088 tttttagatacattcaattaatgatgtat 11172060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 12165393 - 12165349
Alignment:
Q  12 tttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| | ||||||||||||||||||| |||| ||||||||||    
T  12165393 tttttaggttcattcaattaatgatgtatatgatttatattatat 12165349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 12891399 - 12891355
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||| | |||||| |||||||||||| |||||||||||||    
T  12891399 actttttaggttcattcatttaatgatgtatgtgatctatattat 12891355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 14064922 - 14064886
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgat 45  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  14064922 tactttttagattcattcaattaatgatgtatgtgat 14064886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 22584344 - 22584300
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatatta 53  Q
    |||||||||| | ||||||||||||||||||| || |||||||||    
T  22584344 tactttttaggttcattcaattaatgatgtatgtggtctatatta 22584300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 35907873 - 35907905
Alignment:
Q  22 cattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||||||||||| |||||||||||||    
T  35907873 cattcaattaatgatgtatatgatctatattat 35907905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 35969148 - 35969188
Alignment:
Q  1 caaaaatctactttttagatacattc-aattaatgatgtat 40  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  35969148 caaaaatccactttttagatacattcaaattaatgatgtat 35969188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 43340437 - 43340489
Alignment:
Q  3 aaaatctactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    ||||| |||||||||| | ||||||||||||||||||| || || ||||||||    
T  43340437 aaaatttactttttaggttcattcaattaatgatgtatgtggtccatattata 43340489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 639819 - 639874
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  639819 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 639874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31008279 - 31008334
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||| ||||||||    
T  31008279 caaaaatctactttttagatacatttaattaatgatgtatgtggtctttattatat 31008334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33604111 - 33604056
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  33604111 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 33604056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48022615 - 48022670
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  48022615 caaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatat 48022670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8258063 - 8258008
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  8258063 caaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatat 8258008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31008379 - 31008340
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31008379 caaaaatccactttttagatacattcaattaatgatgtat 31008340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37734893 - 37734854
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  37734893 caaaaatccactttttagatacattcaattaatgatgtat 37734854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 3384334 - 3384288
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  3384334 actttttagatacattcaattgatgatgtatgtgatctttattatat 3384288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 42761485 - 42761527
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  42761485 ttttagattcattcaattaatgatgtatctgatctttattata 42761527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6065481 - 6065517
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatg 37  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6065481 caaaattctactttttagatacattcaattaatgatg 6065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2353015 - 2352960
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||| || |||||||||||||| |||||||||||||| || ||| ||||||||    
T  2353015 caaaaatttattttttagatacatttaattaatgatgtatgtgctctttattatat 2352960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3384243 - 3384282
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  3384243 caaaaattcactttttagatacattcaattaatgatgtat 3384282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4060291 - 4060252
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  4060291 caaaaatctactttttagatacatttaactaatgatgtat 4060252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5856477 - 5856422
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    |||||||| |||||||| ||||||||||||||| |||||| || ||| ||||||||    
T  5856477 caaaaatccactttttaaatacattcaattaattatgtatgtggtctttattatat 5856422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6065581 - 6065542
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  6065581 caaaaatccactctttagatacattcaattaatgatgtat 6065542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 19175708 - 19175669
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  19175708 caaaaatctactttttagattcattcaataaatgatgtat 19175669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27206779 - 27206818
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  27206779 caaaaaaccactttttagatacattcaattaatgatgtat 27206818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27206879 - 27206840
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  27206879 caaaaatcaactatttagatacattcaattaatgatgtat 27206840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 35367598 - 35367559
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  35367598 caaaaatccattttttagatacattcaattaatgatgtat 35367559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 41621312 - 41621363
Alignment:
Q  3 aaaatctactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||| || ||||||||| |||||| |||||||||||||||||| |||||||    
T  41621312 aaaatttattttttagattcattcatttaatgatgtatctgatccatattat 41621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 2352916 - 2352954
Alignment:
Q  2 aaaaatctactttttagatacattcaattaatgatgtat 40  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  2352916 aaaaatccactttttagatacattcaattaatgacgtat 2352954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 15278593 - 15278639
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||| | |||||| |||||||||||| ||||||||||||||    
T  15278593 tactttttaggttcattcatttaatgatgtatgtgatctatattata 15278639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 31909777 - 31909823
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||| | ||||||||||||||||||| || |||||||||||    
T  31909777 tactttttaggttcattcaattaatgatgtatgtggtctatattata 31909823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 35049964 - 35050006
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||| | ||||||||||||||||||| ||||||||||||||    
T  35049964 ttttaggttcattcaattaatgatgtatgtgatctatattata 35050006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 36535718 - 36535748
Alignment:
Q  10 actttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||||    
T  36535718 actttttagatacattcaattaatgatgtat 36535748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 37255154 - 37255199
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||||| ||||||||||||||||||| || || |||||||    
T  37255154 tactttttagattcattcaattaatgatgtatgtggtccatattat 37255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 38824399 - 38824358
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||| ||||||||||||||||||| || ||||||||||    
T  38824399 ttttagattcattcaattaatgatgtatgtggtctatattat 38824358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 47599933 - 47599982
Alignment:
Q  7 tctactttttagatacattcaattaatgatgtatctgatctatattatat 56  Q
    ||||||||||| ||  |||||||||||||||||| ||||| |||||||||    
T  47599933 tctactttttaaatttattcaattaatgatgtatgtgatccatattatat 47599982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2349776 - 2349812
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatg 37  Q
    |||||||| | ||||||||||||||||||||||||||    
T  2349776 caaaaatccattttttagatacattcaattaatgatg 2349812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 2349865 - 2349837
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  2349865 tttttagatacattcaattaatgatgtat 2349837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4060191 - 4060247
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgatctatattatatc 57  Q
    |||||||| |||||||||||| ||||||||||| || ||| || ||| |||||||||    
T  4060191 caaaaatccactttttagatatattcaattaataatatatgtggtctttattatatc 4060247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 12447565 - 12447529
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatc 46  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  12447565 actttttagattcattcaattaatgatgtatgtgatc 12447529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 23944068 - 23944096
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  23944068 tttttagatacattcaattaatgatgtat 23944096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 34598973 - 34598929
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||| ||||||||||||||||||| ||||  |||||||    
T  34598973 actttttagattcattcaattaatgatgtatatgattcatattat 34598929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 45925273 - 45925317
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||| |||||| |||||||||||| || ||||||||||    
T  45925273 actttttagattcattcatttaatgatgtatgtggtctatattat 45925317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52923443 - 52923399
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgat 45  Q
    |||||||||||||||||| | |||||||| |||||||||| ||||    
T  52923443 caaaaatctactttttaggttcattcaataaatgatgtatgtgat 52923399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 120265 - 120221
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtatctgat 45  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  120265 caaaaatttactttttagatacattcaattaatgatgtatgtgat 120221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 120174 - 120204
Alignment:
Q  10 actttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||||    
T  120174 actttttagatacattcaattaatgatgtat 120204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 14061 - 14107
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattata 55  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||    
T  14061 tactttttagattcattcaattaatgatgtatatggtctatattata 14107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 61282 - 61243
Alignment:
Q  1 caaaaatctactttttagatacattcaattaatgatgtat 40  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  61282 caaaaatccacattttagatacattcaattaatgatgtat 61243  T

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Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 61194 - 61222
Alignment:
Q  12 tttttagatacattcaattaatgatgtat 40  Q
    |||||||||||||||||||||||||||||    
T  61194 tttttagatacattcaattaatgatgtat 61222  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 38119 - 38074
Alignment:
Q  9 tactttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    |||||||||| | ||||||||||||||||||| || ||||||||||    
T  38119 tactttttaggttcattcaattaatgatgtatgtggtctatattat 38074  T

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Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 38425 - 38385
Alignment:
Q  13 ttttagatacattcaattaatgatgtatctgatctatatta 53  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  38425 ttttaaattcattcaattaatgatgtatgtgatctatatta 38385  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 13724 - 13768
Alignment:
Q  10 actttttagatacattcaattaatgatgtatctgatctatattat 54  Q
    ||||||||||| ||||||||||||||||||| || || |||||||    
T  13724 actttttagattcattcaattaatgatgtatgtggtccatattat 13768  T

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