View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14437_low_3 (Length: 470)
Name: NF14437_low_3
Description: NF14437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14437_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 8 - 452
Target Start/End: Original strand, 32235539 - 32235987
Alignment:
| Q |
8 |
cgaagaatatattaagactgaattttcagatagcattagaaaaaccaaggtggttatgggaaacgtattctaagttaaatgactattttgaagctgtact |
107 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32235539 |
cgaagaacatattaagactgaattttcagatagcattagaaaaaccaaggtggttatgggaaacgtatgctaagttaaatgactattttgaagctgtact |
32235638 |
T |
|
| Q |
108 |
tcttatatcttgatgcgtctgtttttcactagcctctcaggccgaggccgacattatggagtgacttagcttacgattgacgtg---ttattctaaaatg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32235639 |
tcttatatcttgatgcgtctgtttttcactagcctctcaggccgaggctgacattatggagtgacttagcttacgattgacgtgttattattctaaaatg |
32235738 |
T |
|
| Q |
205 |
tcatggttcttctcgctgacaacttttactttatactttctgaaggttttcagctcctggatgcacttttgtgctgtgcgcttattttctgaaagcattc |
304 |
Q |
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|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32235739 |
tcatggttcttctcgctgacaacttttactttatacgttttgaaggttttcagctcctggatgcacttttgtgctgtgcgcttattttctgaaagcattc |
32235838 |
T |
|
| Q |
305 |
tgagatatggattacctccgtccttcttggtactctactcttctagacaagaagttcggtcttatcactttnnnnnnnnnnnnaaacaa-nnnnnnnnnn |
403 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
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| T |
32235839 |
tgagatatggattgcctccgtccttcttggtactctactcttctagacaagaagttcggtcttatcaccttccccctccccccaaacaatttttttttat |
32235938 |
T |
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| Q |
404 |
accactgatcattattgggtcttctgtttattccaggcatgtgtcttag |
452 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32235939 |
accactgatcattattgggtcttctgtttattccaggcatgtgtcttag |
32235987 |
T |
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