View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14437_low_5 (Length: 373)
Name: NF14437_low_5
Description: NF14437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14437_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 21 - 363
Target Start/End: Original strand, 44243986 - 44244328
Alignment:
| Q |
21 |
cccgccacaagcggtgcaacaggcgagcaccatctaaggtgggtggccccgatgacaacaccaacttgccaaggctctatagaagagtgcatagaagaag |
120 |
Q |
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| T |
44243986 |
cccgccacaagcagtgcaacaggcgagcaccatctaaggtgggtggccccgatgacaacaccaacttgccaaggctctatagaagagtgcatagaagaag |
44244085 |
T |
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| Q |
121 |
gtgagtttggaatgaattcagagtctcaccggcgtatcctagcaaccacacactatataagctacagagccctgcagaggaacactgtgccatgctcaca |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44244086 |
gtgagtttggaatgaattcagagtctcaccggcgtatcctagcaaccacacactatataagctacagagccctgcagaggaacactgtgccatgctcaca |
44244185 |
T |
|
| Q |
221 |
caagggtgcatcctattacaattgtcagacaggtgcagaagctaatccttactcccgtggttgtgccaccatcacccgttgccgtaactcttagaagatg |
320 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
44244186 |
taagggtgcatcctattacaattgtcagacaggtgcagaagctaatccttactcccgtggctgtgccaccatcacccgttgccgtaactcttagaagatg |
44244285 |
T |
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| Q |
321 |
ttcaacttttcttctaccatatattcctctagttatgatgatg |
363 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44244286 |
ttcaacttttcttctaccatatattcctctagttatgatgatg |
44244328 |
T |
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