View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14437_low_7 (Length: 341)

Name: NF14437_low_7
Description: NF14437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14437_low_7
NF14437_low_7
[»] chr7 (54 HSPs)
chr7 (21-186)||(24213527-24213704)
chr7 (194-305)||(39520794-39520904)
chr7 (195-305)||(42896997-42897106)
chr7 (202-305)||(36202788-36202891)
chr7 (194-305)||(47238617-47238728)
chr7 (194-305)||(25969391-25969512)
chr7 (194-305)||(27353915-27354036)
chr7 (194-305)||(48163402-48163523)
chr7 (194-305)||(554890-555001)
chr7 (194-305)||(40095644-40095765)
chr7 (195-305)||(11829684-11829804)
chr7 (193-305)||(34238151-34238273)
chr7 (194-305)||(38262993-38263114)
chr7 (195-305)||(27555369-27555489)
chr7 (208-305)||(9250422-9250529)
chr7 (197-305)||(1043071-1043189)
chr7 (197-305)||(34122617-34122735)
chr7 (194-305)||(16850780-16850901)
chr7 (195-305)||(4291507-4291616)
chr7 (197-305)||(16564379-16564476)
chr7 (197-305)||(16601186-16601283)
chr7 (197-305)||(27398047-27398165)
chr7 (194-305)||(26773712-26773833)
chr7 (195-305)||(19510518-19510638)
chr7 (119-186)||(24213823-24213890)
chr7 (119-186)||(24213915-24213982)
chr7 (205-305)||(26845896-26846006)
chr7 (194-305)||(21409385-21409506)
chr7 (195-269)||(23079086-23079160)
chr7 (197-286)||(15878374-15878462)
chr7 (119-188)||(24214007-24214076)
chr7 (195-305)||(44960135-44960255)
chr7 (196-305)||(47720172-47720277)
chr7 (194-257)||(11058346-11058409)
chr7 (119-186)||(24213729-24213796)
chr7 (197-305)||(35159862-35159980)
chr7 (195-257)||(33454065-33454127)
chr7 (235-305)||(36660523-36660593)
chr7 (119-180)||(24214099-24214160)
chr7 (197-305)||(35136056-35136164)
chr7 (207-305)||(7416631-7416729)
chr7 (206-305)||(49015070-49015175)
chr7 (197-257)||(36758054-36758114)
chr7 (197-257)||(36767578-36767638)
chr7 (197-305)||(1363012-1363130)
chr7 (259-302)||(8028766-8028809)
chr7 (198-257)||(18113997-18114055)
chr7 (214-305)||(23311736-23311837)
chr7 (195-269)||(38064590-38064664)
chr7 (207-305)||(8056334-8056438)
chr7 (194-239)||(24956244-24956290)
chr7 (195-244)||(26973062-26973111)
chr7 (203-252)||(44269729-44269778)
chr7 (265-305)||(40041454-40041494)
[»] chr3 (56 HSPs)
chr3 (194-305)||(22611384-22611495)
chr3 (197-305)||(53192498-53192606)
chr3 (194-305)||(10225162-10225272)
chr3 (193-305)||(40497326-40497448)
chr3 (197-305)||(1528502-1528610)
chr3 (194-305)||(7327709-7327830)
chr3 (195-305)||(35389748-35389868)
chr3 (194-305)||(37996811-37996932)
chr3 (193-305)||(2567398-2567509)
chr3 (194-305)||(1679698-1679819)
chr3 (195-305)||(19879103-19879213)
chr3 (194-305)||(55269016-55269133)
chr3 (197-305)||(47642017-47642124)
chr3 (192-305)||(48122820-48122943)
chr3 (195-305)||(22310703-22310823)
chr3 (195-303)||(42464909-42465027)
chr3 (194-305)||(52121177-52121298)
chr3 (196-305)||(28882678-28882797)
chr3 (193-305)||(28704723-28704845)
chr3 (207-305)||(5271489-5271587)
chr3 (194-305)||(52505833-52505953)
chr3 (195-304)||(21006496-21006605)
chr3 (197-305)||(19349600-19349708)
chr3 (194-269)||(41742118-41742193)
chr3 (197-269)||(13748493-13748565)
chr3 (197-305)||(6134382-6134500)
chr3 (197-304)||(22289722-22289839)
chr3 (194-305)||(30787562-30787683)
chr3 (196-253)||(19420904-19420961)
chr3 (205-304)||(13353197-13353296)
chr3 (198-269)||(28968511-28968582)
chr3 (195-260)||(29915859-29915924)
chr3 (195-260)||(29965012-29965077)
chr3 (197-269)||(30226420-30226492)
chr3 (196-305)||(52684200-52684319)
chr3 (193-305)||(25937064-25937185)
chr3 (205-304)||(983202-983311)
chr3 (195-305)||(2122702-2122825)
chr3 (195-269)||(42229672-42229746)
chr3 (259-305)||(45532980-45533026)
chr3 (215-305)||(3983715-3983815)
chr3 (194-233)||(33238720-33238759)
chr3 (195-269)||(21157775-21157849)
chr3 (259-305)||(33240022-33240068)
chr3 (207-260)||(49419245-49419298)
chr3 (193-257)||(38889138-38889201)
chr3 (193-269)||(45347295-45347369)
chr3 (259-305)||(19421488-19421534)
chr3 (208-257)||(47750948-47750997)
chr3 (237-305)||(53165509-53165577)
chr3 (206-260)||(20510211-20510265)
chr3 (259-305)||(28968582-28968628)
chr3 (259-305)||(41742072-41742118)
chr3 (260-305)||(7899719-7899764)
chr3 (264-305)||(45347374-45347415)
chr3 (194-269)||(25700759-25700832)
[»] chr4 (39 HSPs)
chr4 (196-305)||(3403585-3403694)
chr4 (197-305)||(38492269-38492377)
chr4 (193-305)||(19738693-19738815)
chr4 (194-305)||(52122869-52122990)
chr4 (194-305)||(5834827-5834948)
chr4 (197-305)||(8064109-8064227)
chr4 (193-305)||(42472569-42472691)
chr4 (194-305)||(28376993-28377114)
chr4 (194-305)||(41145609-41145730)
chr4 (195-305)||(53322335-53322455)
chr4 (194-300)||(14795020-14795115)
chr4 (197-305)||(5325721-5325839)
chr4 (226-305)||(36943708-36943787)
chr4 (207-305)||(52721274-52721382)
chr4 (197-269)||(2586336-2586408)
chr4 (197-269)||(55901185-55901257)
chr4 (197-305)||(40694070-40694188)
chr4 (197-260)||(52572210-52572273)
chr4 (197-269)||(1176981-1177053)
chr4 (194-269)||(10257697-10257772)
chr4 (193-305)||(46431933-46432054)
chr4 (194-252)||(47607107-47607165)
chr4 (197-269)||(17892248-17892320)
chr4 (197-269)||(36511980-36512052)
chr4 (197-269)||(44121888-44121960)
chr4 (207-298)||(21058843-21058944)
chr4 (196-258)||(31946262-31946324)
chr4 (259-305)||(39957636-39957682)
chr4 (197-305)||(21637665-21637783)
chr4 (259-305)||(4400540-4400586)
chr4 (197-258)||(36561771-36561831)
chr4 (195-305)||(37992533-37992653)
chr4 (199-248)||(51858834-51858883)
chr4 (206-257)||(27981905-27981956)
chr4 (195-258)||(51674856-51674919)
chr4 (205-235)||(726624-726654)
chr4 (205-235)||(754190-754220)
chr4 (243-305)||(4119505-4119567)
chr4 (276-305)||(52572278-52572307)
[»] chr5 (38 HSPs)
chr5 (194-305)||(12852116-12852226)
chr5 (194-305)||(26795004-26795114)
chr5 (194-305)||(32707831-32707952)
chr5 (194-305)||(39690763-39690884)
chr5 (193-305)||(6243169-6243280)
chr5 (197-305)||(33829753-33829871)
chr5 (194-305)||(1639782-1639903)
chr5 (194-305)||(9792316-9792437)
chr5 (194-305)||(30777522-30777643)
chr5 (195-305)||(32624875-32624995)
chr5 (197-305)||(30284607-30284725)
chr5 (197-305)||(41392712-41392830)
chr5 (194-269)||(10656817-10656892)
chr5 (195-303)||(30918376-30918494)
chr5 (197-305)||(7629070-7629177)
chr5 (195-269)||(1795390-1795464)
chr5 (194-305)||(26716270-26716391)
chr5 (194-305)||(26986010-26986131)
chr5 (199-305)||(11906220-11906336)
chr5 (193-305)||(32728709-32728831)
chr5 (199-305)||(26691618-26691734)
chr5 (199-305)||(26961350-26961466)
chr5 (242-305)||(7977296-7977359)
chr5 (198-305)||(17138254-17138370)
chr5 (195-269)||(5612488-5612562)
chr5 (198-268)||(42366150-42366220)
chr5 (197-305)||(3934788-3934906)
chr5 (194-269)||(5721985-5722059)
chr5 (195-269)||(22774552-22774626)
chr5 (207-268)||(15066148-15066209)
chr5 (265-305)||(5986068-5986108)
chr5 (206-257)||(14836390-14836441)
chr5 (203-294)||(22737862-22737948)
chr5 (263-305)||(21251541-21251583)
chr5 (204-258)||(27938170-27938224)
chr5 (259-305)||(34032441-34032487)
chr5 (195-260)||(35746306-35746371)
chr5 (206-258)||(41233388-41233440)
[»] chr8 (40 HSPs)
chr8 (197-305)||(32638866-32638974)
chr8 (193-305)||(16384613-16384735)
chr8 (195-305)||(2872910-2873030)
chr8 (197-305)||(12357889-12357996)
chr8 (197-305)||(12359017-12359124)
chr8 (194-304)||(5539433-5539541)
chr8 (194-305)||(13422205-13422326)
chr8 (194-305)||(32759370-32759491)
chr8 (194-305)||(32877434-32877555)
chr8 (194-305)||(34901382-34901503)
chr8 (194-305)||(36483432-36483553)
chr8 (194-305)||(43771704-43771825)
chr8 (194-305)||(22201337-22201458)
chr8 (194-305)||(28876566-28876687)
chr8 (193-305)||(4245936-4246058)
chr8 (194-305)||(6028484-6028605)
chr8 (194-305)||(12580553-12580674)
chr8 (195-305)||(25022123-25022243)
chr8 (194-305)||(45217220-45217341)
chr8 (195-276)||(40412433-40412514)
chr8 (195-269)||(19436272-19436346)
chr8 (195-269)||(19572421-19572495)
chr8 (194-304)||(37372256-37372376)
chr8 (197-269)||(7411636-7411708)
chr8 (204-260)||(32424928-32424984)
chr8 (199-295)||(19948006-19948112)
chr8 (194-305)||(37668579-37668700)
chr8 (195-305)||(27886188-27886308)
chr8 (195-305)||(27944846-27944966)
chr8 (202-260)||(5818366-5818424)
chr8 (191-269)||(38388661-38388739)
chr8 (194-269)||(32678-32753)
chr8 (194-257)||(29355620-29355683)
chr8 (264-305)||(42949207-42949248)
chr8 (197-260)||(27968103-27968166)
chr8 (197-260)||(28025089-28025152)
chr8 (197-240)||(28737255-28737298)
chr8 (242-305)||(8171239-8171297)
chr8 (203-252)||(20182380-20182429)
chr8 (195-224)||(41099377-41099406)
[»] scaffold0177 (1 HSPs)
scaffold0177 (194-305)||(25541-25651)
[»] scaffold0037 (1 HSPs)
scaffold0037 (194-305)||(27791-27902)
[»] chr1 (45 HSPs)
chr1 (194-305)||(36367702-36367813)
chr1 (197-305)||(20409554-20409672)
chr1 (194-305)||(1043224-1043345)
chr1 (194-305)||(28949241-28949362)
chr1 (194-305)||(6916874-6916995)
chr1 (194-305)||(8132180-8132301)
chr1 (194-305)||(37346848-37346969)
chr1 (194-305)||(38330424-38330545)
chr1 (194-305)||(52895713-52895834)
chr1 (197-305)||(37104120-37104238)
chr1 (194-305)||(1036456-1036577)
chr1 (194-305)||(3426845-3426966)
chr1 (198-305)||(5984228-5984345)
chr1 (194-305)||(13012992-13013113)
chr1 (194-305)||(43189652-43189773)
chr1 (194-305)||(38948729-38948850)
chr1 (193-269)||(9781638-9781714)
chr1 (194-305)||(30323712-30323833)
chr1 (194-305)||(31653402-31653523)
chr1 (195-305)||(25256614-25256734)
chr1 (206-305)||(28659300-28659409)
chr1 (211-304)||(9092494-9092587)
chr1 (197-305)||(24590124-24590233)
chr1 (193-269)||(2364673-2364749)
chr1 (193-269)||(2472900-2472976)
chr1 (194-257)||(34096610-34096673)
chr1 (194-260)||(29167944-29168010)
chr1 (199-269)||(41676035-41676105)
chr1 (203-305)||(38218404-38218501)
chr1 (193-252)||(34432446-34432505)
chr1 (195-269)||(3708325-3708399)
chr1 (195-257)||(14167082-14167144)
chr1 (195-245)||(24849362-24849412)
chr1 (197-253)||(10822402-10822458)
chr1 (262-305)||(14334235-14334278)
chr1 (195-303)||(48715227-48715345)
chr1 (195-269)||(29861799-29861873)
chr1 (199-253)||(40775997-40776051)
chr1 (211-260)||(9528894-9528943)
chr1 (194-235)||(14334169-14334209)
chr1 (199-305)||(32381059-32381175)
chr1 (198-246)||(36551492-36551540)
chr1 (202-260)||(33039618-33039676)
chr1 (197-274)||(8829751-8829826)
chr1 (265-305)||(34432383-34432423)
[»] chr2 (41 HSPs)
chr2 (192-305)||(20536770-20536883)
chr2 (193-305)||(7876710-7876832)
chr2 (194-305)||(38602322-38602443)
chr2 (194-305)||(4170502-4170623)
chr2 (194-305)||(33324815-33324936)
chr2 (195-305)||(6497649-6497769)
chr2 (194-305)||(16561797-16561918)
chr2 (194-305)||(40308897-40309018)
chr2 (194-305)||(6124170-6124291)
chr2 (194-305)||(7807374-7807495)
chr2 (194-305)||(18300969-18301090)
chr2 (195-305)||(45159308-45159418)
chr2 (197-305)||(22484267-22484385)
chr2 (197-304)||(3563851-3563957)
chr2 (194-285)||(12819298-12819388)
chr2 (194-269)||(28746698-28746773)
chr2 (197-304)||(22570937-22571054)
chr2 (193-269)||(4561784-4561860)
chr2 (197-269)||(35342317-35342389)
chr2 (197-305)||(4355325-4355443)
chr2 (195-305)||(14824146-14824256)
chr2 (194-267)||(1776484-1776557)
chr2 (196-260)||(1005512-1005576)
chr2 (196-305)||(2319274-2319393)
chr2 (197-305)||(40536242-40536350)
chr2 (193-260)||(5588103-5588170)
chr2 (197-305)||(44156597-44156715)
chr2 (197-260)||(24585530-24585592)
chr2 (197-305)||(34146180-34146298)
chr2 (194-301)||(31236190-31236307)
chr2 (197-257)||(14217212-14217272)
chr2 (197-257)||(43214572-43214632)
chr2 (192-286)||(15880443-15880537)
chr2 (199-257)||(37134356-37134414)
chr2 (259-305)||(40497385-40497431)
chr2 (197-257)||(21104482-21104542)
chr2 (203-257)||(8482975-8483029)
chr2 (194-304)||(45158134-45158244)
chr2 (192-253)||(25933560-25933621)
chr2 (196-260)||(12206024-12206088)
chr2 (205-260)||(35996651-35996706)
[»] scaffold0112 (1 HSPs)
scaffold0112 (197-305)||(42076-42183)
[»] scaffold0640 (1 HSPs)
scaffold0640 (194-305)||(8092-8213)
[»] scaffold0406 (1 HSPs)
scaffold0406 (193-305)||(13862-13974)
[»] chr6 (22 HSPs)
chr6 (194-305)||(1036826-1036947)
chr6 (194-304)||(10894584-10894693)
chr6 (194-305)||(3212474-3212595)
chr6 (197-305)||(8356958-8357076)
chr6 (195-305)||(32130659-32130779)
chr6 (194-269)||(26327152-26327227)
chr6 (197-305)||(7188779-7188894)
chr6 (195-304)||(7254928-7255037)
chr6 (194-304)||(27083982-27084102)
chr6 (207-305)||(31195869-31195977)
chr6 (197-269)||(234306-234378)
chr6 (197-305)||(31079612-31079719)
chr6 (195-269)||(6708087-6708161)
chr6 (204-305)||(31741168-31741267)
chr6 (206-269)||(32017986-32018049)
chr6 (195-305)||(25834496-25834616)
chr6 (195-260)||(3299139-3299204)
chr6 (197-269)||(19128153-19128225)
chr6 (197-257)||(29892966-29893026)
chr6 (197-260)||(13607840-13607903)
chr6 (203-257)||(13061363-13061417)
chr6 (197-258)||(11105286-11105347)
[»] scaffold0250 (1 HSPs)
scaffold0250 (194-305)||(5509-5630)
[»] scaffold0005 (1 HSPs)
scaffold0005 (194-300)||(44616-44711)
[»] scaffold0060 (1 HSPs)
scaffold0060 (194-305)||(30444-30565)
[»] scaffold0285 (1 HSPs)
scaffold0285 (199-260)||(13252-13313)
[»] scaffold0240 (1 HSPs)
scaffold0240 (195-269)||(10598-10672)


Alignment Details
Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 24213527 - 24213704
Alignment:
Q  21 atacaaacattaataagaactggtttgcaatgttgtatcttctaggtttacaaatgtaaatttagataattggttttgctctgcaaaaagttagcggc-- 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||      
T  24213527 atacaaacattaataagaactggtttgcaatgttgtatcttctaggtttacaaatataaatttagataattggttttgctctacaaaaagttagcggcgc 24213626  T
Q  119 ----------aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 186  Q
              |||||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  24213627 atttgtttgtaattttcttgaatagttaagtaacttgaagtagcgaaatagttgttggctttaaaaatctcagcttag 24213704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 39520794 - 39520904
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39520794 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-cttcccgatacgtatccggagagtatccaaatatt 39520892  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  39520893 aaattttatttt 39520904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 42896997 - 42897106
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42896997 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-cttcccgatacgtatccggagagtatccaaatatta 42897095  T
Q  295 aattttatttt 305  Q
    |||||||||||    
T  42897096 aattttatttt 42897106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 36202891 - 36202788
Alignment:
Q  202 ccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaatttta 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  36202891 ccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatgcctgcccgatacgtatccggagagtatccaaatattaaatttta 36202792  T
Q  302 tttt 305  Q
    ||||    
T  36202791 tttt 36202788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 47238728 - 47238617
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||  ||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  47238728 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatcccctgcgtatattgcaccgatacctgcccgatatgtatctggagagtatccaaatatt 47238629  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  47238628 aaattttatttt 47238617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 25969391 - 25969512
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  25969391 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 25969490  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  25969491 tccaaatattaaattttatttt 25969512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 27353915 - 27354036
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  27353915 ctgtgaagccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 27354014  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  27354015 tccaaatattaaattttatttt 27354036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 48163402 - 48163523
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  48163402 ctgtgaagccccgatacttcaaaatgggtgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 48163501  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  48163502 tccaaatattaaattttatttt 48163523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 555001 - 554890
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | || |||    
T  555001 ctgtgaagccccgatactctaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgataccttcctgatacgtatcaggagagtattcgaagatt 554902  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  554901 aaattttatttt 554890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 40095644 - 40095765
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  40095644 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 40095743  T
Q  284 tccaaatattaaattttatttt 305  Q
    || |||||||||||||||||||    
T  40095744 tctaaatattaaattttatttt 40095765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 11829684 - 11829804
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtat 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||           |||||| |||||||||||||||||||    
T  11829684 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccaatacgtatccggagagtat 11829783  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  11829784 ccaaatattaaattttatttt 11829804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 34238151 - 34238273
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||          ||| ||||||||||| ||||||||    
T  34238151 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcaccgatacctgcccgatactttccgatacgtattcggagagt 34238250  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||||    
T  34238251 atccaaatattaaattttatttt 34238273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 38262993 - 38263114
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||          ||| |||||||||||||||||||||    
T  38262993 ctgtgaagccccgatacttcaaaatggatgacgtaccgtattctctgcgtatcctgcatcgatacctgcccgatactttccgatacgtatccggagagta 38263092  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  38263093 tccaaatattaaattttatttt 38263114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 27555489 - 27555369
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtat 284  Q
    |||||||||| ||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||          ||||||||||||||||||||||||    
T  27555489 tgtgaagccctgatacttcaaaatggatgacgtaccgtattctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtat 27555390  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  27555389 ccaaatattaaattttatttt 27555369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 9250529 - 9250422
Alignment:
Q  208 tacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaat 297  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  9250529 tacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaaat 9250430  T
Q  298 tttatttt 305  Q
    ||||||||    
T  9250429 tttatttt 9250422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 1043189 - 1043071
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||          ||| |||||||||||| |||||||||||    
T  1043189 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagtatcc 1043090  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  1043089 aaatattaaattttatttt 1043071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 34122735 - 34122617
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||| |||||||||||    
T  34122735 tgaagcctagatacttcaaaatggatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 34122636  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  34122635 aaatattaaattttatttt 34122617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 16850780 - 16850901
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||          ||| |||||||||||| | ||||||    
T  16850780 ctgtgaagccccgatatttcaaaatggatgacgtaccgtattccctgtgtatcatgcaccgatacttgcccgatactttccgatacgtatctgaagagta 16850879  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  16850880 tccaaatattaaattttatttt 16850901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 4291507 - 4291616
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggaga-gtatccaaatatt 293  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||   ||| || | |||||||||||||    
T  4291507 tgtgaagccccgatactttaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatac--ttcccgatacgtatccaaatatt 4291604  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  4291605 aaattttatttt 4291616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 16564476 - 16564379
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||||||| |||||||||||||||||||||    
T  16564476 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc-----------cccgatacgtatcgggagagtatccaaatattaaa 16564388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 16601186 - 16601283
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||||||| |||||||||||||||||||||    
T  16601186 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc-----------cccgatacgtatcgggagagtatccaaatattaaa 16601274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 27398165 - 27398047
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac----------gtatccggagagtatcc 286  Q
    |||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||| | ||||||          |||||||||||||||||    
T  27398165 tgaagcccggatactttaaaatggatgacgtactgtatcccctgcgtatcctgcactgatacctgctcgatactttccaatatgtatccggagagtatcc 27398066  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  27398065 aaatattaaattttatttt 27398047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 26773833 - 26773712
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||| || ||||||||||||||||           |||| ||||||||||| ||||||||    
T  26773833 ctgtgaagccccgatactttaaaattgatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatacttctcgatacgtatcgggagagta 26773734  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  26773733 tccaaatattaaattttatttt 26773712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 19510518 - 19510638
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||          ||||| |||| ||||| || ||||||    
T  19510518 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgtgtatcatgcactgatacatgcccgatacttcctgatatgtatcgggtgagtat 19510617  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  19510618 ccaaatattaaattttatttt 19510638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 24213823 - 24213890
Alignment:
Q  119 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 186  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||| ||||||||    
T  24213823 aattttcttgaatagtaaagtaacttgaattagagaaacaattcttggctttaaaaatcccagcttag 24213890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 24213915 - 24213982
Alignment:
Q  119 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 186  Q
    |||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24213915 aattttcttgaagagtcaagtaaattgaattagcgaaacagttcttggctttaaaaatctcagcttag 24213982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 26846006 - 26845896
Alignment:
Q  205 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatatta 294  Q
    |||||||||||||||||||| |||||||||| | || |||||||||||||||||          |||||||||||||||  |||||||||||||||||||    
T  26846006 cgatacttcaaaatggatgatgtaccgtatctcatgcgtatcctgcaccgatacctgcccaatacttcccgatacgtatttggagagtatccaaatatta 26845907  T
Q  295 aattttatttt 305  Q
    |||||||||||    
T  26845906 aattttatttt 26845896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 21409385 - 21409506
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagta 283  Q
    |||||||||||  |||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||          |||||||||||||| ||||||||    
T  21409385 ctgtgaagccctcatacttaaaaatggatgacgtatcgtatctcctgtatatcctgcactgatacctgcctgatacatcccgatacgtatcaggagagta 21409484  T
Q  284 tccaaatattaaattttatttt 305  Q
    |||||| |||||||||||||||    
T  21409485 tccaaagattaaattttatttt 21409506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 23079160 - 23079086
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| | |||||||| ||||||||    
T  23079160 tgtgtagccccgatacttcaaaatggatgacataccgtatcccctgcgtatcctggatcgatacctacccgatac 23079086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 15878462 - 15878374
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatcc 286  Q
    ||||||||||||||||||||| |||||| ||||||||||||||  |||||||  ||||||| ||| |||||||||||| |||||||||||    
T  15878462 tgaagccccgatacttcaaaacggatgatgtaccgtatcccctacgtatcctataccgata-ctttccgatacgtatcaggagagtatcc 15878374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 24214007 - 24214076
Alignment:
Q  119 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttagtg 188  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||| |||||||    
T  24214007 aattttcttgaatagtcaagtaacttgaattagcaaaacagttcttggctttataaatctcaacttagtg 24214076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 44960255 - 44960135
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||          |||||||||| ||||| | |||||||    
T  44960255 tgtgaagctccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgacacctgtctgatacttcccgatatgtatcagaagagtat 44960156  T
Q  285 ccaaatattaaattttatttt 305  Q
    ||||| |||||||||||||||    
T  44960155 ccaaagattaaattttatttt 44960135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 47720277 - 47720172
Alignment:
Q  196 gtgaagccccgatacttcaa---aatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 292  Q
    ||||||||||||||||||||   ||||||||||| | ||||||||       || |||||||||  |||||||||||||||||||||||||||| |||||    
T  47720277 gtgaagccccgatacttcaacaaaatggatgacgaatcgtatccc-------tcttgcaccgattacttcccgatacgtatccggagagtatccgaatat 47720185  T
Q  293 taaattttatttt 305  Q
    |||||||||||||    
T  47720184 taaattttatttt 47720172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 11058346 - 11058409
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    |||||||| || | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11058346 ctgtgaagtccaggtacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 11058409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 24213729 - 24213796
Alignment:
Q  119 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 186  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  24213729 aatttttttgaatagtcaagtaacttgaattagcgaaacagttcttgacgttaaaaatctcagcttag 24213796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 35159862 - 35159980
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||  ||| ||||||||||||          |||||||||||||||| |||||||||||    
T  35159862 tgaagctccgatacttcaaaatggatgatgtatcgtatcccctgcatattctgcaccgatacttgtctaatacttcccgatacgtatcaggagagtatcc 35159961  T
Q  287 aaatattaaattttatttt 305  Q
     || |||||||||||||||    
T  35159962 gaagattaaattttatttt 35159980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 33454065 - 33454127
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  33454065 tgtgaagccccgatatttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgata 33454127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 36660523 - 36660593
Alignment:
Q  235 cccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||| ||||||||||||| ||||||  ||||||||||||| |||||||| ||||||||||||||||||||    
T  36660523 cccctatgtatcctgcaccaatacctgtccgatacgtatccagagagtattcaaatattaaattttatttt 36660593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 24214099 - 24214160
Alignment:
Q  119 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctca 180  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||| |||||||||||||    
T  24214099 aattttcttgaatagtcaaataacttgaattagcgaaacaattattggttttaaaaatctca 24214160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 35136056 - 35136164
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||| | ||||||||||||||| |||||||||||||  |||| ||||| |||||||||| || ||||||||||||  | ||||||||  |  ||||||    
T  35136056 tgaagctcggatacttcaaaatgggtgacgtaccgtatttcctgggtatcttgcaccgatatctgcccgatacgtattggaagagtatcatatcattaaa 35136155  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  35136156 ttttatttt 35136164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 7416631 - 7416729
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||||| |||  |||||  || |||||| |||| ||||| || || |||||||||| ||||||||||| || |||||||||||||||    
T  7416631 atacttcaaaatggatgatgtattgtatcttctatgtatcttgcatcgatatctgcctgatacgtatcaggagagtatccgaagattaaattttatttt 7416729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 49015175 - 49015070
Alignment:
Q  206 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct-tc-----ccgatacgtatccggagagtatccaaatattaaattt 299  Q
    |||||||||||||||||||| ||||||||| | |||||||| | ||||||||||| ||     |||||||||||| | |||||||||||  |||||||||    
T  49015175 gatacttcaaaatggatgacataccgtatctcatgtgtatcatacaccgatacctgtctgaatccgatacgtatcagaagagtatccaacgattaaattt 49015076  T
Q  300 tatttt 305  Q
    ||||||    
T  49015075 tatttt 49015070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 36758114 - 36758054
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||| ||||||||||||| |||| ||| ||||||||||| |||| |||||||||||    
T  36758114 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36758054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 36767638 - 36767578
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||| ||||||||||||| |||| ||| ||||||||||| |||| |||||||||||    
T  36767638 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36767578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 1363130 - 1363012
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    ||||| || ||||||||||||||||||| | ||  ||||||||||||||| ||||| |||||          |||| ||||||||||| |||||||||||    
T  1363130 tgaagtccagatacttcaaaatggatgatgaacattatcccctgtgtatcttgcactgatacatgcttgatacttctcgatacgtatcaggagagtatcc 1363031  T
Q  287 aaatattaaattttatttt 305  Q
     ||||| ||||||||||||    
T  1363030 gaatatgaaattttatttt 1363012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 8028766 - 8028809
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttat 302  Q
    ||||| |||||||||| |||||||||||||||||||||||||||    
T  8028766 cttcctgatacgtatcgggagagtatccaaatattaaattttat 8028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 18114055 - 18113997
Alignment:
Q  198 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||| |||| |||||||||||||||||||| ||||| || |||||||||||||||||    
T  18114055 gaagcccagata-ttcaaaatggatgacgtaccatatcctctatgtatcctgcaccgata 18113997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 23311736 - 23311837
Alignment:
Q  214 aaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtatccaaatattaaattttatt 303  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||           |||||||||| ||||| ||||||||||| || |||||||||||||    
T  23311736 aaaatagatgatgtaccgtatcccatgtgtatcctgcaccgatatatgtctgatacttcccgatatgtatcaggagagtatccgaagattaaattttatt 23311835  T
Q  304 tt 305  Q
    ||    
T  23311836 tt 23311837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 38064590 - 38064664
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||| |||||||||||| || |||||| | || ||||| ||||| |||||||  |||||||    
T  38064590 tgtgaagccccgatactttaaaatggatgacataacgtatctcatgcgtatcatgcactgatacctgaccgatac 38064664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 8056438 - 8056334
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgat------accttcccgatacgtatccggagagtatccaaatattaaatttt 300  Q
    ||||||||||||||||||||||||||||||  || ||||| || ||||||        ||| |||||||||||| ||||||||||  || ||||||||||    
T  8056438 atacttcaaaatggatgacgtaccgtatcctttgcgtatcttgtaccgatgtctggtactttccgatacgtatcaggagagtatctgaagattaaatttt 8056339  T
Q  301 atttt 305  Q
    |||||    
T  8056338 atttt 8056334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 24956244 - 24956290
Alignment:
Q  194 ctgtgaagcccc-gatacttcaaaatggatgacgtaccgtatcccct 239  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  24956244 ctgtgaagccccagatacttcaaaattgatgacgtatcgtatcccct 24956290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 26973062 - 26973111
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgta 244  Q
    |||||||||| ||||||| ||||| | ||||||| |||||||||||||||    
T  26973062 tgtgaagccctgatactttaaaatagttgacgtatcgtatcccctgtgta 26973111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 44269729 - 44269778
Alignment:
Q  203 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 252  Q
    ||||||||||||| ||||||||||||| ||||||| ||  ||||||||||    
T  44269729 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgcac 44269778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 40041454 - 40041494
Alignment:
Q  265 gatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||| ||||||||||| || |||||||||||||||    
T  40041454 gatacgtatcaggagagtatccgaagattaaattttatttt 40041494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 22611495 - 22611384
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22611495 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcaccgatacctgcccgatacgtatccggagagtatccaaatatt 22611396  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  22611395 aaattttatttt 22611384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 53192498 - 53192606
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53192498 tgaagccccgatacttcaaaatggatgacgtaccgtataccctgagtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 53192597  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  53192598 ttttatttt 53192606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 10225272 - 10225162
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  10225272 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata-ctttccgatacgtatccggagagtatccaaatatt 10225174  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  10225173 aaattttatttt 10225162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 40497326 - 40497448
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||    
T  40497326 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatccggagagt 40497425  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||||    
T  40497426 atccaaatattaaattttatttt 40497448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 1528502 - 1528610
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||| ||||||||||||||||||||||||| | ||||||||| ||||| |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1528502 tgaagctccgatacttcaaaatggatgacgtatcatatcccctgcgtatcatgcatcgatacctgcccgatacgtatccggagagtatccaaatattaaa 1528601  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  1528602 ttttatttt 1528610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 7327709 - 7327830
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||| ||||    
T  7327709 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggatagta 7327808  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  7327809 tccaaatattaaattttatttt 7327830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 35389748 - 35389868
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| |||||||||    
T  35389748 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtat 35389847  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  35389848 ccaaatattaaattttatttt 35389868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 37996932 - 37996811
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||          ||||||||||||||||||||||||    
T  37996932 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgagacctgcccgatatttcccgatacgtatccggagagta 37996833  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  37996832 tccaaatattaaattttatttt 37996811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 193 - 305
Target Start/End: Complemental strand, 2567509 - 2567398
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 292  Q
    ||||||||  |||||||||||||||||||||||||| |||||  |||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||    
T  2567509 actgtgaaatcccgatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcaccgata-cttcccgatacgtatccagagagtatccgaatat 2567411  T
Q  293 taaattttatttt 305  Q
    |||||||||||||    
T  2567410 taaattttatttt 2567398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 1679819 - 1679698
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||||          |||||||||||||||||||||||||    
T  1679819 ctgtgaagccccgatacttcaaaatggataacgtaccgtatccactgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 1679720  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  1679719 tccaaatattaaattttatttt 1679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 19879213 - 19879103
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 294  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||  ||||||||||| || |||     
T  19879213 tgtgaagccgcaatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatatgtataaggagagtatccgaagattc 19879114  T
Q  295 aattttatttt 305  Q
    |||||||||||    
T  19879113 aattttatttt 19879103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 55269133 - 55269016
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac------cttcccgatacgtatccggagagtatcca 287  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||      |||||||||||||||| |||||||||||     
T  55269133 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgatacttcccgatacgtatcaggagagtatccg 55269034  T
Q  288 aatattaaattttatttt 305  Q
    || |||||||||||||||    
T  55269033 aagattaaattttatttt 55269016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 47642017 - 47642124
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||| ||||||||| | ||||||||| || ||||||    
T  47642017 tgaagcctcgatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgcaccgata-cttcccaatacgtatcagaagagtatccgaagattaaa 47642115  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  47642116 ttttatttt 47642124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 192 - 305
Target Start/End: Original strand, 48122820 - 48122943
Alignment:
Q  192 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagag 281  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||           |||||||||||||||| |||||    
T  48122820 cactctgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacatgcccgatatttcccgatacgtatccagagag 48122919  T
Q  282 tatccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||||    
T  48122920 tatccaaatattaaattttatttt 48122943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 22310703 - 22310823
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||   |||||||    
T  22310703 tgtgaagccccgatacttcacaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacctgcctgatacttcccgatacgtatcgatagagtat 22310802  T
Q  285 ccaaatattaaattttatttt 305  Q
    | |||||||||||||||||||    
T  22310803 caaaatattaaattttatttt 22310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 42465027 - 42464909
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||    
T  42465027 tgtgaagccccgatacttcaaaatggatgacgtactgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtat 42464928  T
Q  285 ccaaatattaaattttatt 303  Q
    ||||||||||| |||||||    
T  42464927 ccaaatattaatttttatt 42464909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 52121177 - 52121298
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||          |||| ||||||||||| ||||||||    
T  52121177 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactaatacctgtccgatacttctcgatacgtatcgggagagta 52121276  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  52121277 tccaaatattaaattttatttt 52121298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 28882797 - 28882678
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtatc 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||           ||| |||||||||||| ||||||||||    
T  28882797 gtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcatgcaccgatatatgcccgatactttccgatacgtatcgggagagtatc 28882698  T
Q  286 caaatattaaattttatttt 305  Q
    ||||||||||||||||||||    
T  28882697 caaatattaaattttatttt 28882678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 28704723 - 28704845
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac----------gtatccggagagt 282  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||  |||||||          |||||||||||||    
T  28704723 actgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcatatcctgcactgatacctatccgatactttccaatatgtatccggagagt 28704822  T
Q  283 atccaaatattaaattttatttt 305  Q
    ||| |||||||||||||||||||    
T  28704823 atcaaaatattaaattttatttt 28704845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 5271489 - 5271587
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||| |||||| ||| ||||||| || |||||||| |||||||||||||||||||||||| |||||||||||  | |||||||||||||||    
T  5271489 atacttcaaaatagatgacatactgtatcccttgcgtatcctgaaccgataccttcccgatacgtatcaggagagtatccggagattaaattttatttt 5271587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 52505953 - 52505833
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||| ||||||||||||||||||          ||||||||||||||||| ||||||    
T  52505953 ctgtgaagccccgatacttaaaaatggatgatgtactgtat-ccctgcgtatcctgcaccgataccggcccgatatttcccgatacgtatccgaagagta 52505855  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  52505854 tccaaatattaaattttatttt 52505833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 21006605 - 21006496
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 294  Q
    ||||||||||||||||||||||||| |||||||| | |||| | || ||||| |||| |||||||| ||||| |||||| |||||||||||| |||||||    
T  21006605 tgtgaagccccgatacttcaaaatgaatgacgtatcatatctcatgcgtatcttgcatcgatacctgcccgacacgtattcggagagtatccgaatatta 21006506  T
Q  295 aattttattt 304  Q
    || |||||||    
T  21006505 aaatttattt 21006496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 19349708 - 19349600
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||| ||||||||||||||||| ||||||| |||||| |||||||| ||||||| ||||||| ||||||||||||| | ||||||| | || ||||||    
T  19349708 tgaagctccgatacttcaaaatggttgacgtatcgtatctcctgtgtaacctgcactgatacctgcccgatacgtatcagaagagtatacgaagattaaa 19349609  T
Q  297 ttttatttt 305  Q
    |||| ||||    
T  19349608 ttttttttt 19349600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 41742193 - 41742118
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  41742193 ctgtgaagcgccgatacttcaaaatggatgacgtattgtatcctctgtgtatcctgcaccgataccttcctgatac 41742118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 13748565 - 13748493
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||| ||||||||    
T  13748565 tgaagccccgatacttcaaaatggttgacgtatcgtatcctctgcgtatcctgcaccgatacctgcccgatac 13748493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 6134500 - 6134382
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||| ||||| |||||||||||    
T  6134500 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacatacctgatacttcccgatatgtatcaggagagtatcc 6134401  T
Q  287 aaatattaaattttatttt 305  Q
     || ||||||| |||||||    
T  6134400 gaagattaaatattatttt 6134382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 304
Target Start/End: Complemental strand, 22289839 - 22289722
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||          ||||| |||||||||| |||||||||||    
T  22289839 tgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccaatacctgcatgatacttcctgatacgtatcaggagagtatcc 22289740  T
Q  287 aaatattaaattttattt 304  Q
     || ||||||||||||||    
T  22289739 gaagattaaattttattt 22289722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 30787683 - 30787562
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || |||||          |||| ||||||||||| ||||||||    
T  30787683 ctgtgaagccccgatacttcaaaatcgatgacgtatcgtatcccctgcgtatcctgtactgatacttgtttgacacttctcgatacgtatcaggagagta 30787584  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||| || |||||||||||||||    
T  30787583 tccgaagattaaattttatttt 30787562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 19420904 - 19420961
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 253  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  19420904 gtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 19420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 304
Target Start/End: Complemental strand, 13353296 - 13353197
Alignment:
Q  205 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttattt 304  Q
    |||||||| ||||||||||||||| |||||| |||| ||||||||| |||||| || |||||||||||||  ||| |||||| || | ||||||||||||    
T  13353296 cgatactttaaaatggatgacgtatcgtatctcctgcgtatcctgcgccgatatctgcccgatacgtatcaagagcgtatccgaagaataaattttattt 13353197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 28968511 - 28968582
Alignment:
Q  198 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||||||||||||||||||||||||| |||||  |  ||||||||||||||||||| ||||||||    
T  28968511 gaagccccgatacttcaaaatggatgacgtaccatatcctttacgtatcctgcaccgatacctgcccgatac 28968582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 29915859 - 29915924
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  29915859 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacct 29915924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 29965012 - 29965077
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  29965012 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacct 29965077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 30226420 - 30226492
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||  ||||||||||||||||||| || ||||||| ||| ||||||||||||||||||| ||||||||    
T  30226420 tgaagcccatatacttcaaaatggatgacttatcgtatcctctgcgtatcctgcaccgatacctgcccgatac 30226492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 305
Target Start/End: Original strand, 52684200 - 52684319
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatc 285  Q
    ||||||| ||||||||||||||| ||||||||| |||||| | || |||||||||||||||||          ||| |||||||||||  ||||||||||    
T  52684200 gtgaagctccgatacttcaaaatagatgacgtatcgtatctcatgcgtatcctgcaccgatacctgtccgatactttccgatacgtattaggagagtatc 52684299  T
Q  286 caaatattaaattttatttt 305  Q
    | ||||||||||||||||||    
T  52684300 cgaatattaaattttatttt 52684319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 305
Target Start/End: Complemental strand, 25937185 - 25937064
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||||||||||| ||||||| ||||||||||||||| |||||| |||| ||||||| |||| ||||          ||| |||||||||||| |||||||    
T  25937185 actgtgaagccc-gatactttaaaatggatgacgtatcgtatctcctgcgtatcctacaccaatacatgcccgatactttccgatacgtatctggagagt 25937087  T
Q  283 atccaaatattaaattttatttt 305  Q
    ||| |||||||||||||||||||    
T  25937086 atctaaatattaaattttatttt 25937064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 304
Target Start/End: Original strand, 983202 - 983311
Alignment:
Q  205 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatccaaatatta 294  Q
    ||||| |||||||||||||||||| ||||||||||||||||  ||||| |||| ||          |||||||||||||| |||||||||||||| ||||    
T  983202 cgataattcaaaatggatgacgtatcgtatcccctgtgtattttgcactgatatctgtctgatacttcccgatacgtatcaggagagtatccaaagatta 983301  T
Q  295 aattttattt 304  Q
    ||||||||||    
T  983302 aattttattt 983311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 2122702 - 2122825
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcc---cctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagag 281  Q
    ||||||||||||||||||||||||||||||||||  ||||||   |||| ||||| |||||||||||          |||||||||||||||| ||||||    
T  2122702 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctcctgcgtatcatgcaccgatacttgcctgatacttcccgatacgtatcaggagag 2122801  T
Q  282 tatccaaatattaaattttatttt 305  Q
     |||| || |||||||||||||||    
T  2122802 aatccgaagattaaattttatttt 2122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 42229672 - 42229746
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||| || |||||||||||| |||||||||   ||||||||| ||||||||||||||||||| ||||||||    
T  42229672 tgtgaagctccaatacttcaaaatagatgacgtattatatcccctgcgtatcctgcaccgatacctgcccgatac 42229746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 45533026 - 45532980
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  45533026 cttcccgatacgtatccgaagagtatccaaatattaaattttatttt 45532980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 3983715 - 3983815
Alignment:
Q  215 aaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaattttattt 304  Q
    ||||||||||||||| |||||| | |||||||||||||||||||          |||||||||||||||| ||||||||||| || ||||||||||||||    
T  3983715 aaatggatgacgtactgtatcctccgtgtatcctgcaccgatacttgtctgatacttcccgatacgtatcaggagagtatccgaagattaaattttattt 3983814  T
Q  305 t 305  Q
    |    
T  3983815 t 3983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 33238720 - 33238759
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgta 233  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33238720 ctgtgaagccccgatacttcaaaatggatgacgtaccgta 33238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 21157849 - 21157775
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| ||||||||||||||||||||||| ||||| | ||||| ||||||||  |||| || ||||||||    
T  21157849 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatac 21157775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 33240022 - 33240068
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33240022 cttcccgatacgtatcgggagagtatccaaatattatattttatttt 33240068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 49419245 - 49419298
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||||||||||||||||||||| |||||||| || |||||||||| ||||||||    
T  49419245 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcatcgatacct 49419298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 38889201 - 38889138
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| ||  | ||||||||||||||    
T  38889201 actgtgaagccctgatacttcaaaatggatgacgtatcgtatcctctacg-atcctgcaccgata 38889138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 45347295 - 45347369
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| ||||||||||||||||| |||| || |||||||||||  |||||||||| ||||||| ||||||||    
T  45347295 actgtgaagctccgatacttcaaaatggttgac-tatcgtatcccctg-ctatcctgcactgatacctgcccgatac 45347369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 19421488 - 19421534
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||    
T  19421488 cttcccgatacgtatcaggagagtatccgaagattaaattttatttt 19421534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 47750997 - 47750948
Alignment:
Q  208 tacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  47750997 tacttcaaaatggatgacgtactatatcctctgcgtatcctgcaccgata 47750948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 53165577 - 53165509
Alignment:
Q  237 cctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||| ||||| ||||| ||||||||||||||||||||| | |||| |||| || |||| ||||||||||    
T  53165577 cctgcgtatcatgcactgataccttcccgatacgtatcagaagagcatccgaagattatattttatttt 53165509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 20510265 - 20510211
Alignment:
Q  206 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||||||||||||||||| | |||||||| || ||||| || ||||||||||    
T  20510265 gatacttcaaaatggatgacgcatcgtatcccgtgcgtatcttgtaccgatacct 20510211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 28968582 - 28968628
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||| | ||||||||| || |||||||||||||||    
T  28968582 cttcccgatacgtatcagaagagtatccgaagattaaattttatttt 28968628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 41742118 - 41742072
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||||    
T  41742118 cttcccgatacatatctggagagtatccgaagattaaattttatttt 41742072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 7899764 - 7899719
Alignment:
Q  260 ttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||||||| | ||||||||| || |||||||||||||||    
T  7899764 ttcccgatacgtatcagaagagtatccgaagattaaattttatttt 7899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 45347374 - 45347415
Alignment:
Q  264 cgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  45347374 cgatacgtatccgaagagtatccgaagattaaattttatttt 45347415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 25700759 - 25700832
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| |||||||||||  |||||||  ||  |||||| ||| ||||||||||||||||||| || |||||    
T  25700759 ctgtgaagcctcgatacttcaa--tggatgatatattgtatcctctgcgtatcctgcaccgatacctgcctgatac 25700832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 3403694 - 3403585
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaa 295  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3403694 gtgaagccccaatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcactgatatcttcccgatacgtatccggagagtatccaaatattaa 3403595  T
Q  296 attttatttt 305  Q
    ||||||||||    
T  3403594 attttatttt 3403585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 38492377 - 38492269
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38492377 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 38492278  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  38492277 ttttatttt 38492269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 19738693 - 19738815
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||    
T  19738693 actgggaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagt 19738792  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||||    
T  19738793 atccaaatattaaattttatttt 19738815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 52122990 - 52122869
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  52122990 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 52122891  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  52122890 tccaaatattaaattttatttt 52122869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 5834827 - 5834948
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  5834827 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagta 5834926  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  5834927 tccaaatattaaattttatttt 5834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 8064227 - 8064109
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||||     
T  8064227 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 8064128  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  8064127 aaatattaaattttatttt 8064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 193 - 305
Target Start/End: Complemental strand, 42472691 - 42472569
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    ||||||||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||          |||||| |||||||||||||||||    
T  42472691 actgtgaagtcccgatacttcaaaatggatgacgtactgtattccctgcgtatcctgcaccgatacttgcccgatacttcccaatacgtatccggagagt 42472592  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||||    
T  42472591 atccaaatattaaattttatttt 42472569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 28376993 - 28377114
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcc----------cgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||          ||||||||| | ||||||||    
T  28376993 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctacccgatacttttcgatacgtaccgggagagta 28377092  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  28377093 tccaaatattaaattttatttt 28377114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 41145609 - 41145730
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||          ||| ||||||||||| |||||||||    
T  41145609 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcatcgatacctgtccgatactttccgatacgtattcggagagta 41145708  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  41145709 tccaaatattaaattttatttt 41145730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 53322335 - 53322455
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagtat 284  Q
    |||||||||||||||||||||||||||||||||| |||||||  || ||||||||||| ||||||          |||||||||||||||||||||||||    
T  53322335 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcctttgcgtatcctgcactgataccggctcgatacttcccgatacgtatccggagagtat 53322434  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  53322435 ccaaatattaaattttatttt 53322455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 14795020 - 14795115
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||           |||||||||||||||||||||||||||||||    
T  14795020 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------ccgatacgtatccggagagtatccaaatatt 14795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 5325839 - 5325721
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||          |||||||||||||||| |||||||||||    
T  5325839 tgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 5325740  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  5325739 aaatattaaattttatttt 5325721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 36943708 - 36943787
Alignment:
Q  226 gtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| || |||||| ||||||||    
T  36943708 gtaccgtatcccctgtgtatcctgcaccgatacctacccgatacgtatcagaagagtatccgaagattaaaatttatttt 36943787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 52721274 - 52721382
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||          ||||||||||||| ||||||||||||||||||||||    
T  52721274 atacttcaaaatagatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccgatacgtattcggagagtatccaaatattaaa 52721373  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  52721374 ttttatttt 52721382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 2586336 - 2586408
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||    
T  2586336 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgagtatccttcaccgacacctgcccgatac 2586408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 55901257 - 55901185
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  55901257 tgaaaccccgatactttaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatacatacccgatac 55901185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 40694070 - 40694188
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||| ||| |||||||| || |||| ||||||||||||          |||||||||||||||| ||||||||||     
T  40694070 tgaagccccgatacttcaaaatggatgatgtatcgtatcccatgcgtattctgcaccgatacctgattgatacttcccgatacgtatcaggagagtatct 40694169  T
Q  287 aaatattaaattttatttt 305  Q
     || |||||||||||||||    
T  40694170 gaagattaaattttatttt 40694188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 52572210 - 52572273
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||    
T  52572210 tgaagccccgatactttaaaatggatgacgttccgtatcccctgtgcatcatgcaccgatacct 52572273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 1176981 - 1177053
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||||||| | ||||||| ||||||||||  |||||||||||| |||||| ||||||||    
T  1176981 tgaagccccgatacttcaaaatagttgacgtatcgtatcccctacgtatcctgcacccatacctgcccgatac 1177053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 10257697 - 10257772
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||| |||| ||| | |||||||| ||||||||    
T  10257697 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatccgctgcgtattctgtatcgatacctgcccgatac 10257772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 305
Target Start/End: Complemental strand, 46432054 - 46431933
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||||||||||| |||||||||||| |||||||||| ||||||| |||  ||||||||| ||||||          ||||||||||||||||  ||||||    
T  46432054 actgtgaagccc-gatacttcaaaacggatgacgtatcgtatcctctgcatatcctgcaacgatacctgactgatacttcccgatacgtatcaagagagt 46431956  T
Q  283 atccaaatattaaattttatttt 305  Q
    ||||||| |||||||||||||||    
T  46431955 atccaaagattaaattttatttt 46431933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 47607107 - 47607165
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 252  Q
    |||||||||||||||||||||||||||||||| || |||||| |||| |||||||||||    
T  47607107 ctgtgaagccccgatacttcaaaatggatgacatatcgtatctcctgcgtatcctgcac 47607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 17892248 - 17892320
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||| |||||||||||||||||| ||||||||||||| | || ||||| | ||||||||||| ||||||||    
T  17892248 tgaagctccgatacttcaaaatggacgacgtaccgtatctcatgcgtatcatacaccgatacctgcccgatac 17892320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 36512052 - 36511980
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||||||||| |||||||  ||||||| || ||||||||| ||||||| | ||||||||    
T  36512052 tgaagccccgatacttcaaaatggttgacgtattgtatcccgtgcgtatcctgcgccgatacttgcccgatac 36511980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 44121960 - 44121888
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||  ||||||||||||||| |||||| ||||||  ||| ||||||||||||||||||| ||||||||    
T  44121960 tgaagcccacatacttcaaaatggacgacgtatcgtatcttctgcgtatcctgcaccgatacctgcccgatac 44121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 298
Target Start/End: Original strand, 21058843 - 21058944
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||| |||||| |||||||| ||||||| |||||||||||||||||||||           ||||||||||||||| |||||||||||||| ||||||    
T  21058843 atactttaaaatgaatgacgtagcgtatccactgtgtatcctgcaccgatacatgtctgatatttcccgatacgtatctggagagtatccaaagattaaa 21058942  T
Q  297 tt 298  Q
    ||    
T  21058943 tt 21058944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 31946324 - 31946262
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 258  Q
    |||||||  |||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||    
T  31946324 gtgaagcttcgatactttaaaatggatgacgtatcgtattccctgcgtatcctgcaccgatac 31946262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 39957636 - 39957682
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39957636 cttctcgatacgtatccggagagtatccgaatattaaattttatttt 39957682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 21637665 - 21637783
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatcc 286  Q
    ||||| || |||||||||||||||||||||| || || ||||| ||||| |||||  |||||||          |||||||||||||| |||||||||||    
T  21637665 tgaagtccagatacttcaaaatggatgacgtcccataccccctatgtattctgcattgatacctctcttatacttcccgatacgtatcaggagagtatcc 21637764  T
Q  287 aaatattaaattttatttt 305  Q
     || |||||||||||||||    
T  21637765 gaagattaaattttatttt 21637783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 4400540 - 4400586
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4400540 cttcccgatacgtatcaggagagtatcagaatattaaattttatttt 4400586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 36561831 - 36561771
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 258  Q
    |||||| | |||||||||||||||||||| ||  |||||||| |||||||||||||||||||    
T  36561831 tgaagctctgatacttcaaaatggatgacttattgtatcccc-gtgtatcctgcaccgatac 36561771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 37992653 - 37992533
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||||| ||| |||||||||||||| ||||||  ||||||| || | ||| |||||||||||          ||| |||||||||||| | |||||||    
T  37992653 tgtgaagctccggtacttcaaaatggaagacgtattgtatcccttgcggatcttgcaccgatacatgtctgatactttccgatacgtatcagaagagtat 37992554  T
Q  285 ccaaatattaaattttatttt 305  Q
    ||||| |||||||||||||||    
T  37992553 ccaaagattaaattttatttt 37992533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 51858834 - 51858883
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcct 248  Q
    |||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  51858834 aagccccgatactttaaaatggatgacgtatcgtatctcctgcgtatcct 51858883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 27981905 - 27981956
Alignment:
Q  206 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||||||||||||||||| |||||| |||| | ||||| ||||||||    
T  27981905 gatacttcaaaatggatgacgtatcgtatctcctgcgcatcctccaccgata 27981956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 51674856 - 51674919
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 258  Q
    |||||||| ||||||||||||||| ||||||||| |||||| ||||  ||| |||||| |||||    
T  51674856 tgtgaagcgccgatacttcaaaatagatgacgtatcgtatctcctgcatattctgcactgatac 51674919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 726654 - 726624
Alignment:
Q  205 cgatacttcaaaatggatgacgtaccgtatc 235  Q
    |||||||||||||||||||||||||||||||    
T  726654 cgatacttcaaaatggatgacgtaccgtatc 726624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 754190 - 754220
Alignment:
Q  205 cgatacttcaaaatggatgacgtaccgtatc 235  Q
    |||||||||||||||||||||||||||||||    
T  754190 cgatacttcaaaatggatgacgtaccgtatc 754220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 4119567 - 4119505
Alignment:
Q  243 tatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||  ||||||| || |||||||||| ||||||||||| |  |||||||||||||||    
T  4119567 tatcctgcattgatacctgcctgatacgtatcgggagagtatccgacaattaaattttatttt 4119505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 305
Target Start/End: Original strand, 52572278 - 52572307
Alignment:
Q  276 ggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||||||||||    
T  52572278 ggagagtatccaaatattaaattttatttt 52572307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 12852116 - 12852226
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  12852116 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-cttcctgatacgtatccggagagtatccaaatatt 12852214  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  12852215 aaattttatttt 12852226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 26795114 - 26795004
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  26795114 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata-ctttccgatacgtatccggagagtatccaaatatt 26795016  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  26795015 aaattttatttt 26795004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 32707952 - 32707831
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  32707952 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 32707853  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  32707852 tccaaatattaaattttatttt 32707831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 39690884 - 39690763
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  39690884 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagta 39690785  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  39690784 tccaaatattaaattttatttt 39690763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 305
Target Start/End: Complemental strand, 6243280 - 6243169
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 292  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  6243280 actgtgaagctccgatacttcaaaatggatgacgtattgtatcctctgcgtatcctgcaccgata-ctttccgatacgtatccggagagtatccgaatat 6243182  T
Q  293 taaattttatttt 305  Q
    |||||||||||||    
T  6243181 taaattttatttt 6243169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 33829753 - 33829871
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||    
T  33829753 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgcctgatacttcccgatacgtatccggagagtatcc 33829852  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||| ||||    
T  33829853 aaatattaaattttttttt 33829871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 1639903 - 1639782
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||          |||||||||||||||||| ||||||    
T  1639903 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagta 1639804  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  1639803 tccaaatattaaattttatttt 1639782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 9792316 - 9792437
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||          ||||||||||||||||| |||||||    
T  9792316 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgtgtatcctgcatcgatacctgcccgatacttcccgatacgtatccagagagta 9792415  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  9792416 tccaaatattaaattttatttt 9792437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 30777643 - 30777522
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||          |||||||||||||||||||||||||    
T  30777643 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 30777544  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  30777543 tccaaatattaaattttatttt 30777522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 32624875 - 32624995
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||          ||||||||||||||| || |||||||    
T  32624875 tgtgaagccccgatatttcaaaatggatgacgtaccgtatcccctgtgtatcttgcatcgatacctgcccgatacttcccgatacgtattcgaagagtat 32624974  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  32624975 ccaaatattaaattttatttt 32624995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 30284725 - 30284607
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| |||||||||||    
T  30284725 tgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatcaggagagtatcc 30284626  T
Q  287 aaatattaaattttatttt 305  Q
     || |||||||||||||||    
T  30284625 gaagattaaattttatttt 30284607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 41392830 - 41392712
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||| |||||||| ||||||||    
T  41392830 tgaagtccagatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatatgtatccggggagtatcc 41392731  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  41392730 aaatattaaattttatttt 41392712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 10656817 - 10656892
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  10656817 ctgtgaagccccgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatac 10656892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 30918376 - 30918494
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||          ||||||||||||||| ||||||||||    
T  30918376 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtattcggagagtat 30918475  T
Q  285 ccaaatattaaattttatt 303  Q
    | ||||||||| |||||||    
T  30918476 caaaatattaatttttatt 30918494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 7629070 - 7629177
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || || |||| |||||||||||||||| ||||||||||  || ||||||    
T  7629070 tgaagccctgatacctcaaaatggatgacgtatcgtatcccctgcgtatcttgtactgata-cttcccgatacgtatcaggagagtatctgaagattaaa 7629168  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  7629169 ttttatttt 7629177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 1795390 - 1795464
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||| ||||||||    
T  1795390 tgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctccgtatcctgcaccgatacctgcccgatac 1795464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 26716270 - 26716391
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||          |||||||||||||||| | ||||||    
T  26716270 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagta 26716369  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||| || |||||||||||||||    
T  26716370 tccgaagattaaattttatttt 26716391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 26986010 - 26986131
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||          |||||||||||||||| | ||||||    
T  26986010 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagta 26986109  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||| || |||||||||||||||    
T  26986110 tccgaagattaaattttatttt 26986131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 11906220 - 11906336
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatccaa 288  Q
    ||||| ||||||||||||||||||||||||  |||| ||||| |||||||||||||||| ||          |||||||||||||||||||||||||| |    
T  11906220 aagcctcgatacttcaaaatggatgacgtattgtattccctgcgtatcctgcaccgatatctgtccgatacttcccgatacgtatccggagagtatccga 11906319  T
Q  289 atattaaattttatttt 305  Q
    |||||||||||||||||    
T  11906320 atattaaattttatttt 11906336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 305
Target Start/End: Complemental strand, 32728831 - 32728709
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagt 282  Q
    |||||||||| ||||||||||||||| ||||| |||  |||||||||| ||||| |||| ||||||||          ||||||||||||||||||||||    
T  32728831 actgtgaagctccgatacttcaaaattgatgatgtattgtatcccctgcgtatcttgcatcgatacctgcccgatacttcccgatacgtatccggagagt 32728732  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||| ||||||||||    
T  32728731 atccaaatattagattttatttt 32728709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 26691618 - 26691734
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 288  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||          ||||||||||||||||  |||||||||| |    
T  26691618 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26691717  T
Q  289 atattaaattttatttt 305  Q
    | |||||||||||||||    
T  26691718 agattaaattttatttt 26691734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 26961350 - 26961466
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 288  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||          ||||||||||||||||  |||||||||| |    
T  26961350 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26961449  T
Q  289 atattaaattttatttt 305  Q
    | |||||||||||||||    
T  26961450 agattaaattttatttt 26961466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 7977296 - 7977359
Alignment:
Q  242 gtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||    
T  7977296 gtatcctgcaccgatacttgcccgatacgtattcggagagtatctaaatattaaattttatttt 7977359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 17138370 - 17138254
Alignment:
Q  198 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtatcca 287  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||           |||||||||||||||| ||||| |||||     
T  17138370 gaagccccgatacttcaaaatagatgacgta-tgtatcccctgcgtatcctgcaccgataattgcctgatacttcccgatacgtatcaggagaatatccg 17138272  T
Q  288 aatattaaattttatttt 305  Q
    || |||||||||||||||    
T  17138271 aagattaaattttatttt 17138254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 5612562 - 5612488
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| ||||||||||||||||||||||| ||||| | ||||| ||||||||  |||| || ||||||||    
T  5612562 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatac 5612488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 42366220 - 42366150
Alignment:
Q  198 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgata 268  Q
    ||||| || |||||||||||| ||||| |||| |||||||||| ||||||||||| ||||||| |||||||    
T  42366220 gaagctccaatacttcaaaatagatgatgtactgtatcccctgcgtatcctgcactgatacctgcccgata 42366150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 3934906 - 3934788
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    ||||||| | |||||| |||||||||||||||   ||||||||| |||||| ||||||||||          ||| |||||||||||| |||||||||||    
T  3934906 tgaagcctccatactttaaaatggatgacgtattatatcccctgcgtatcccgcaccgatacctacctgatacttaccgatacgtatcaggagagtatcc 3934807  T
Q  287 aaatattaaattttatttt 305  Q
     || |||||||||||||||    
T  3934806 gaagattaaattttatttt 3934788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 5721985 - 5722059
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||| |||| || ||||| ||||||||| ||||||||||| ||||||||||| ||||| | ||||||||    
T  5721985 ctgtgaagccc-gatattttaaaattgatgacgtatcgtatcccctgcgtatcctgcactgatacatgcccgatac 5722059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 22774552 - 22774626
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||| | |||||||| ||||||| || |||| |||||||||||  ||||||||||||||| || ||||||||    
T  22774552 tgtgaagtctcgatactttaaaatggttggcgtatcgtatcccctgcatatcctgcaccgatatctgcccgatac 22774626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 15066148 - 15066209
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgata 268  Q
    |||||||||||| ||||| ||| |||||||| ||||||| ||||||||||| || |||||||    
T  15066148 atacttcaaaatagatgatgtatcgtatcccatgtgtattctgcaccgatatctgcccgata 15066209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 5986108 - 5986068
Alignment:
Q  265 gatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  5986108 gatacgtattgggagagtatccaaatattaaattttatttt 5986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 14836390 - 14836441
Alignment:
Q  206 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||||||||| |||||||  |||||||||| |||||||||| |||||    
T  14836390 gatacttcaaaatggttgacgtattgtatcccctgcgtatcctgcatcgata 14836441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 22737862 - 22737948
Alignment:
Q  203 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 294  Q
    |||||||||||||||| |||||||||  |||||  |||     | |||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  22737862 cccgatacttcaaaattgatgacgtattgtatcatctg-----catgcatcgatacctgcccgatacgtatcaggagagtatccaaagatta 22737948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 21251541 - 21251583
Alignment:
Q  263 ccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||| ||||||||||| |||||||||||| |||||    
T  21251541 ccgatacgtatcaggagagtatccgaatattaaatttaatttt 21251583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 27938170 - 27938224
Alignment:
Q  204 ccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 258  Q
    |||||||||||||||||||||||||  ||||| | || ||||| |||||||||||    
T  27938170 ccgatacttcaaaatggatgacgtattgtatctcatgcgtatcatgcaccgatac 27938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 34032441 - 34032487
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||| ||||||||||| || ||||| |||||||||    
T  34032441 cttcccgatacgtatcaggagagtatccgaagattaatttttatttt 34032487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 35746371 - 35746306
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||||||| ||||||||||||||| |||||||||  ||||| |||  ||||| |||| ||||||||    
T  35746371 tgtgaagctccgatacttcaaaatagatgacgtattgtatctcctacgtatcatgcatcgatacct 35746306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 41233388 - 41233440
Alignment:
Q  206 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 258  Q
    ||||||||||||||||||||||| |||||  |||  |||||||||| ||||||    
T  41233388 gatacttcaaaatggatgacgtatcgtatttcctacgtatcctgcaacgatac 41233440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 32638974 - 32638866
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32638974 tgaagctctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 32638875  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  32638874 ttttatttt 32638866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 16384613 - 16384735
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||| |||||    
T  16384613 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgagtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagt 16384712  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||||    
T  16384713 atccaaatattaaattttatttt 16384735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 2873030 - 2872910
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||    
T  2873030 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 2872931  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||| ||||||||||||    
T  2872930 ccaaatatgaaattttatttt 2872910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 12357889 - 12357996
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||    
T  12357889 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaa 12357987  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  12357988 ttttatttt 12357996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 12359017 - 12359124
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||    
T  12359017 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaa 12359115  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  12359116 ttttatttt 12359124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 5539433 - 5539541
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5539433 ctgtgaagccc-gatacttcaaaatggatgatgtactgtatccc-tgcgtatcctgcaccgatacctgcccgatatgtatccggagagtatccaaatatt 5539530  T
Q  294 aaattttattt 304  Q
    |||||||||||    
T  5539531 aaattttattt 5539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 13422205 - 13422326
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||          ||||||||||||||| |||||||||    
T  13422205 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgcctgatacttcccgatacgtatacggagagta 13422304  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  13422305 tccaaatattaaattttatttt 13422326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 32759370 - 32759491
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  32759370 ctgtgaagcctcgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagta 32759469  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  32759470 tccaaatattaaattttatttt 32759491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 32877434 - 32877555
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  32877434 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagta 32877533  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  32877534 tccaaatattaaattttatttt 32877555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 34901503 - 34901382
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  34901503 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 34901404  T
Q  284 tccaaatattaaattttatttt 305  Q
    || |||||||||||||||||||    
T  34901403 tctaaatattaaattttatttt 34901382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 36483432 - 36483553
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||| ||||||    
T  36483432 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccgaagagta 36483531  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  36483532 tccaaatattaaattttatttt 36483553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 43771825 - 43771704
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  43771825 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 43771726  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  43771725 tccaaatattaaattttatttt 43771704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 22201458 - 22201337
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  22201458 ctgtgaagtcccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 22201359  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  22201358 tccaaatattaaattttatttt 22201337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 28876687 - 28876566
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||          |||| |||||||||||| |||||||    
T  28876687 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatccagagagta 28876588  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  28876587 tccaaatattaaattttatttt 28876566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 4245936 - 4246058
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||          |||||||||||||||||| |||||    
T  4245936 actgtgaagccccgatgcttcaaaatagatgacgtaccgtatcccctgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagt 4246035  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||||    
T  4246036 atccaaatattaaattttatttt 4246058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 6028484 - 6028605
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||           ||| ||||||| |||| ||||||||    
T  6028484 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccgatactttccgatacatatcgggagagta 6028583  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  6028584 tccaaatattaaattttatttt 6028605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 12580674 - 12580553
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||           |||||||||||||||||||||||||    
T  12580674 ctgtgaagccccgatacttcaaaatagatgatgtaccgtatctcctgcgtatcctgcaccgataactgtctgatacttcccgatacgtatccggagagta 12580575  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  12580574 tccaaatattaaattttatttt 12580553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 25022123 - 25022243
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||          ||||| |||||||||| |||||||||    
T  25022123 tgtgaagccccaatacttcaaaatggatgacataccgtatctcctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcgggagagtat 25022222  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  25022223 ccaaatattaaattttatttt 25022243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 45217341 - 45217220
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| |||||||||||  ||  |||||||||| |||||||||||||||||||          | |||||||||||||||||||||    
T  45217341 ctgtgaagccccgatactttaaaatggatgatatattgtatcccctgcgtatcctgcaccgatacctgtccgatattttccgatacgtatccggagagta 45217242  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  45217241 tccaaatattaaattttatttt 45217220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 40412433 - 40412514
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccg 276  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  40412433 tgtgaagccccaatacttcaaaatggatgatgtatcgtatcccctgcgtatcctgcaccgttacctgcccgatacgtatccg 40412514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 19436272 - 19436346
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||  |||||||    
T  19436272 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatac 19436346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 19572421 - 19572495
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||  |||||||    
T  19572421 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatac 19572495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 37372256 - 37372376
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||| ||||||||||| |||||          |||||||||||||||| ||||||||    
T  37372256 ctgtgaagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcactgatacctgtctgatacttcccgatacgtatcaggagagta 37372355  T
Q  284 tccaaatattaaattttattt 304  Q
    ||| || ||||||||||||||    
T  37372356 tccgaagattaaattttattt 37372376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 7411636 - 7411708
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||| |||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||| ||||||||    
T  7411636 tgaagctccgatacttcaaaatggatggcgtatcgtatccactgtgtatcctgcatcgatacctgcccgatac 7411708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 32424928 - 32424984
Alignment:
Q  204 ccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  32424928 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacct 32424984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 19948112 - 19948006
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 288  Q
    |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||          |||||||||||||| | |||||||||||||    
T  19948112 aagccctgatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgctcgatacttcccgatacgtaccgggagagtatccaa 19948013  T
Q  289 atattaa 295  Q
    |||||||    
T  19948012 atattaa 19948006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 37668579 - 37668700
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||           ||||||||||| ||| |||| | ||    
T  37668579 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcttgcaccaatatctgtctgatacttcccgatacatatacggataata 37668678  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  37668679 tccaaatattaaattttatttt 37668700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 27886188 - 27886308
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    ||||||| ||||||||||||||||||||||||||  |||| |||||  ||||||||||||||||          |||||||||||||||| |||||||||    
T  27886188 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtat 27886287  T
Q  285 ccaaatattaaattttatttt 305  Q
    || || |||||| ||||||||    
T  27886288 ccgaagattaaagtttatttt 27886308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 27944846 - 27944966
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    ||||||| ||||||||||||||||||||||||||  |||| |||||  ||||||||||||||||          |||||||||||||||| |||||||||    
T  27944846 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtat 27944945  T
Q  285 ccaaatattaaattttatttt 305  Q
    || || |||||| ||||||||    
T  27944946 ccgaagattaaagtttatttt 27944966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 5818424 - 5818366
Alignment:
Q  202 ccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||||||||||||||||||||||| |||||| | || |||||||||||||||||||    
T  5818424 ccccgatacttcaaaatggatgacgtatcgtatcacttgcgtatcctgcaccgatacct 5818366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 38388661 - 38388739
Alignment:
Q  191 gcactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| ||||||||||||||||||||||  |||  |||||| ||| |||||||||||||||||||  |||||||    
T  38388661 gcactgtgaaaccccgatacttcaaaatggatgctgtattgtatcctctgcgtatcctgcaccgatacctgtccgatac 38388739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 32678 - 32753
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||| |||||||||||||| ||||||| ||||||| | ||||| |||||||||||||| ||||| || ||||||||    
T  32678 ctgtaaagccccgatactttaaaatggttgacgtatcatatcctctgtgtatcctgcatcgatatctgcccgatac 32753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 29355620 - 29355683
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||||| |||||||||||||||||||| || | ||||||||| |||||||||| |||||    
T  29355620 ctgtgaagccctgatacttcaaaatggatgacatatcatatcccctgggtatcctgcatcgata 29355683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 42949207 - 42949248
Alignment:
Q  264 cgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  42949207 cgatacgtatcgggagagtatccaaatattaaattttatttt 42949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 27968103 - 27968166
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||| |||||||||| ||||| |||||||||  |||| |||||  ||||||||||||||||||    
T  27968103 tgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacct 27968166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 28025089 - 28025152
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||| |||||||||| ||||| |||||||||  |||| |||||  ||||||||||||||||||    
T  28025089 tgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacct 28025152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 28737255 - 28737298
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctg 240  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||    
T  28737255 tgaagccccgatatttcaaaatggatgacgtattgtatcccctg 28737298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 8171297 - 8171239
Alignment:
Q  242 gtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||||||    |||||||||| | ||||||||| ||||||||||||||||||    
T  8171297 gtatcctgcaccgatacct----gatacgtatc-gtagagtatccgaatattaaattttatttt 8171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 20182380 - 20182429
Alignment:
Q  203 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 252  Q
    ||||||||||||| ||||||||||||| ||||||| ||  ||||||||||    
T  20182380 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgcac 20182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 41099406 - 41099377
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatga 224  Q
    ||||||||||||||||||||||||||||||    
T  41099406 tgtgaagccccgatacttcaaaatggatga 41099377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 25651 - 25541
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  25651 ctgtgaagccccgatacttcaaaatggatgacgcaccgtatcccctgcgtattctgcaccgata-cttcccgatacgtatccggagagtatccaaatatt 25553  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  25552 aaattttatttt 25541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 27902 - 27791
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  27902 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgtccgatacgtatccgcagagtatccaaatatt 27803  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  27802 aaattttatttt 27791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 36367813 - 36367702
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    |||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36367813 ctgtgaagtcctgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatatt 36367714  T
Q  294 aaattttatttt 305  Q
    ||||||||||||    
T  36367713 aaattttatttt 36367702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 20409672 - 20409554
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||    
T  20409672 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 20409573  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  20409572 aaatattaaattttatttt 20409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 1043224 - 1043345
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  1043224 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 1043323  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  1043324 tccaaatattaaattttatttt 1043345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 28949362 - 28949241
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  28949362 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagta 28949263  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  28949262 tccaaatattaaattttatttt 28949241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 6916995 - 6916874
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  6916995 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 6916896  T
Q  284 tccaaatattaaattttatttt 305  Q
    || |||||||||||||||||||    
T  6916895 tctaaatattaaattttatttt 6916874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 8132180 - 8132301
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  8132180 ctgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtatcctgcaccgatacatgttcgatacttcccgatacgtatccggagagta 8132279  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  8132280 tccaaatattaaattttatttt 8132301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 37346969 - 37346848
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| || |||||    
T  37346969 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggggagta 37346870  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  37346869 tccaaatattaaattttatttt 37346848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 38330424 - 38330545
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  38330424 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 38330523  T
Q  284 tccaaatattaaattttatttt 305  Q
    || |||||||||||||||||||    
T  38330524 tctaaatattaaattttatttt 38330545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 52895834 - 52895713
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  52895834 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 52895735  T
Q  284 tccaaatattaaattttatttt 305  Q
    || |||||||||||||||||||    
T  52895734 tctaaatattaaattttatttt 52895713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 37104120 - 37104238
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          ||||| ||||||||||||||||||||||    
T  37104120 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatcc 37104219  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  37104220 aaatattaaattttatttt 37104238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 1036456 - 1036577
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  1036456 ctgtgaagccctcatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 1036555  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  1036556 tccaaatattaaattttatttt 1036577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 3426845 - 3426966
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  3426845 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 3426944  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  3426945 tccaaatattaaattttatttt 3426966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 198 - 305
Target Start/End: Original strand, 5984228 - 5984345
Alignment:
Q  198 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcca 287  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||          |||||| ||||||||| ||||||||||||    
T  5984228 gaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtattctgcaccgatacatgcttgatacttcccaatacgtatctggagagtatcca 5984327  T
Q  288 aatattaaattttatttt 305  Q
    ||||||||||||||||||    
T  5984328 aatattaaattttatttt 5984345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 13013113 - 13012992
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||| |||||          |||||||||||||||| ||||||||    
T  13013113 ctgtgaagccccaatacttcaaaatggatgacatatcgtatcccctgtgtatcatgcactgatacctgcccgatacttcccgatacgtatcgggagagta 13013014  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  13013013 tccaaatattaaattttatttt 13012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 43189652 - 43189773
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||| ||||||||||| ||||||||    
T  43189652 ctgtgaagacccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcaggagagta 43189751  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||| ||||    
T  43189752 tccaaatattaaattttttttt 43189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 38948729 - 38948850
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||           |||| ||||||||||||| ||| ||    
T  38948729 ctgtgaagctccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccaatacttctcgatacgtatccgaagaata 38948828  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  38948829 tccaaatattaaattttatttt 38948850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 9781638 - 9781714
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  9781638 actgtgaagccctgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatac 9781714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 30323712 - 30323833
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    |||| |||||||||||||||||||||||||||| | ||||| | ||||||||||||||| ||||           |||||||||||||||| ||||||||    
T  30323712 ctgtaaagccccgatacttcaaaatggatgacgcaacgtattctctgtgtatcctgcactgatatctgcccgatacttcccgatacgtatctggagagta 30323811  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  30323812 tccaaatattaaattttatttt 30323833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 31653523 - 31653402
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    ||||||||||| ||||||||||||||||| | ||| |||||||| |||||||| ||||||||||           |||||||||||||||| ||||||||    
T  31653523 ctgtgaagccctgatacttcaaaatggataatgtatcgtatcccttgtgtatcatgcaccgatatctgcccgatacttcccgatacgtatcgggagagta 31653424  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  31653423 tccaaatattaaattttatttt 31653402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 25256614 - 25256734
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtat 284  Q
    |||||||| | |||| ||||||||||||||||||| |||||| ||| |||| ||||||||||||||          ||||||||||||||||||||||||    
T  25256614 tgtgaagctctgatatttcaaaatggatgacgtactgtatcctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtat 25256713  T
Q  285 ccaaatattaaattttatttt 305  Q
     ||||||||||||||||||||    
T  25256714 tcaaatattaaattttatttt 25256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 28659409 - 28659300
Alignment:
Q  206 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaa 295  Q
    ||||||| |||||||||||||||| |||| ||||| ||||| |||||||||||          ||| |||||||||||||||||||||||||||||||||    
T  28659409 gatactttaaaatggatgacgtacggtattccctgcgtatcatgcaccgatacatgcccgatactttccgatacgtatccggagagtatccaaatattaa 28659310  T
Q  296 attttatttt 305  Q
    ||||||||||    
T  28659309 attttatttt 28659300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 9092587 - 9092494
Alignment:
Q  211 ttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttattt 304  Q
    ||||||||||||||||||| ||||||  |||||||||||||   |||||| || |||||||||| ||||||||||| || ||||||||||||||    
T  9092587 ttcaaaatggatgacgtactgtatcctatgtgtatcctgcagtcatacctgcctgatacgtatcaggagagtatccgaagattaaattttattt 9092494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 24590233 - 24590124
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct-tcccgatacgtatccggagagtatccaaatattaa 295  Q
    |||||| |||||||||||||| ||||| |||||||||| || || ||||||||||| |||||||  |||||||||||||  ||||||||   || |||||    
T  24590233 tgaagcgccgatacttcaaaagggatggcgtaccgtattccttgcgtatcctgcactgatacctgccccgatacgtatcaagagagtatttgaagattaa 24590134  T
Q  296 attttatttt 305  Q
    ||||||||||    
T  24590133 attttatttt 24590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 2364673 - 2364749
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||| ||| ||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||| ||| ||||    
T  2364673 actgtgaaacccagatacttcaaaatggataacgtaccatatcccctgcgtatcctgcatcgatacctgcccaatac 2364749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 2472976 - 2472900
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||  |||||||||||| ||||| || |||||    
T  2472976 actgtgaagctccgatacttcaaaatagatgacgtatcgtatcccctgcatatcctgcaccggtacctgcctgatac 2472900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 34096673 - 34096610
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    |||||||||||||||| |||||||||  ||||||| ||||||||||| ||||||||||||||||    
T  34096673 ctgtgaagccccgatatttcaaaatgattgacgtatcgtatcccctgcgtatcctgcaccgata 34096610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 29167944 - 29168010
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||| ||||| | |||||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  29167944 ctgtaaagcctccatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacct 29168010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 41676105 - 41676035
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||| || |||||||||||||||||||||| |||| ||||| |||||||||||||  |||||||    
T  41676105 aagccccgatattttaaaatggatgacgtaccgtatctcctgcgtatcatgcaccgatacctgtccgatac 41676035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 305
Target Start/End: Original strand, 38218404 - 38218501
Alignment:
Q  203 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttat 302  Q
    ||||||||||||||||||||||||||||||||||| || ||||    | |||||| ||||  |||||||||| | ||||||||| || ||||||||||||    
T  38218404 cccgatacttcaaaatggatgacgtaccgtatcccttgcgtat----ctccgata-cttcttgatacgtatcagaagagtatccgaagattaaattttat 38218498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 34432505 - 34432446
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 252  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||| ||||| |||||    
T  34432505 actgtgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtatcatgcac 34432446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 3708399 - 3708325
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||  |||||| |||| |||| | ||||||||    
T  3708399 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcctctgcatatcctacaccaatacatgcccgatac 3708325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 14167082 - 14167144
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||| | ||||||||||||||||||||| || |||||| |||| ||||||||||||||||    
T  14167082 tgtgaagtctcgatacttcaaaatggatgacttatcgtatcacctgcgtatcctgcaccgata 14167144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 24849362 - 24849412
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtat 245  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  24849362 tgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtat 24849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 10822402 - 10822458
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 253  Q
    ||||||| |||||||||||||||||||||||| | ||| ||||| ||||||||||||    
T  10822402 tgaagcctcgatacttcaaaatggatgacgtatcatattccctgcgtatcctgcacc 10822458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 14334235 - 14334278
Alignment:
Q  262 cccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  14334235 cccgatacgtattgggagagtatccaaatattaaattttatttt 14334278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 48715345 - 48715227
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||| |||||||||||||||||||||   ||| |||||| |||| ||||||| |||||||||          |||||||||||||||| ||||||| |    
T  48715345 tgtgaaaccccgatacttcaaaatggatattgtatcgtatctcctgcgtatcctacaccgataccggcccgatacttcccgatacgtatcaggagagtgt 48715246  T
Q  285 ccaaatattaaattttatt 303  Q
    || || |||||||||||||    
T  48715245 ccgaagattaaattttatt 48715227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 29861799 - 29861873
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||||||||||| |||||||  ||||| |||  ||||| |||||| | |||| ||||||||    
T  29861799 tgtgaagccccgatacttcaaaatggttgacgtattgtatctcctacgtatcatgcacccacacctgcccgatac 29861873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 40775997 - 40776051
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 253  Q
    |||||| |||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  40775997 aagcccagatacttcaaaatggaagacgtaatgtatcccctgcgtatcctgcacc 40776051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 9528943 - 9528894
Alignment:
Q  211 ttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||||||||||||||  ||||||| |||||||| |||||||||||||    
T  9528943 ttcaaaatggatgacgtattgtatcccttgtgtatcttgcaccgatacct 9528894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 14334169 - 14334209
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatc 235  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  14334169 ctgtgaagccc-gatacttcaaaatggatgacgtaccgtatc 14334209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 305
Target Start/End: Complemental strand, 32381175 - 32381059
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 288  Q
    |||||||||||||| |||||||||||  ||||||||||||||  |||| |||||| |||           |||||| ||||||||| ||||||||||| |    
T  32381175 aagccccgatactttaaaatggatgatataccgtatcccctgcatatcatgcaccaatatttgtctgatacttcccaatacgtatcaggagagtatccga 32381076  T
Q  289 atattaaattttatttt 305  Q
    | |||||||||||||||    
T  32381075 agattaaattttatttt 32381059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 36551492 - 36551540
Alignment:
Q  198 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatc 246  Q
    ||||||||||||||||||||| |||||||||| || ||||||| |||||    
T  36551492 gaagccccgatacttcaaaattgatgacgtactgtctcccctgcgtatc 36551540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 33039618 - 33039676
Alignment:
Q  202 ccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||||||| ||||||||| || ||  ||||||| || |||||||||||||||||||    
T  33039618 ccccgatactttaaaatggataacatattgtatcccttgcgtatcctgcaccgatacct 33039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 274
Target Start/End: Complemental strand, 8829826 - 8829751
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatc 274  Q
    ||||||||  |||||||||||| || || |||||||||  |||| |||||||||| ||||| ||||||||||||||||    
T  8829826 tgaagcccaaatacttcaaaatagacgaagtaccgtat-tcctgcgtatcctgcatcgata-cttcccgatacgtatc 8829751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 34432423 - 34432383
Alignment:
Q  265 gatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||| ||||||||||| || |||||||||||||||    
T  34432423 gatacgtatcaggagagtatccgaagattaaattttatttt 34432383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 192 - 305
Target Start/End: Original strand, 20536770 - 20536883
Alignment:
Q  192 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaata 291  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||| | ||||||||||||| | ||||||||||||||    
T  20536770 cactgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcaccgatacttgcccgatacgtatcggaagagtatccaaata 20536869  T
Q  292 ttaaattttatttt 305  Q
    ||||||||||||||    
T  20536870 ttaaattttatttt 20536883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 7876710 - 7876832
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||    
T  7876710 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagt 7876809  T
Q  283 atccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||||    
T  7876810 atccaaatattaaattttatttt 7876832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 38602443 - 38602322
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  38602443 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 38602344  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  38602343 tccaaatattaaattttatttt 38602322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 4170623 - 4170502
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  4170623 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggagagta 4170524  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  4170523 tccaaatattaaattttatttt 4170502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 33324815 - 33324936
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  33324815 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 33324914  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  33324915 tccaaatattaaattttatttt 33324936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 6497769 - 6497649
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||    
T  6497769 tgtgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagtat 6497670  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  6497669 ccaaatattaaattttatttt 6497649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 16561797 - 16561918
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||          |||||||||||||||||||||||||    
T  16561797 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccttgcgtattctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 16561896  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  16561897 tccaaatattaaattttatttt 16561918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 40309018 - 40308897
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||          |||||||||||||||||||||||||    
T  40309018 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatcccatgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 40308919  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  40308918 tccaaatattaaattttatttt 40308897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 6124170 - 6124291
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||          ||||| |||||||||||||||||||    
T  6124170 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgtgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 6124269  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  6124270 tccaaatattaaattttatttt 6124291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 7807495 - 7807374
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||          |||||||||||||||||||| ||||    
T  7807495 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgtaccgatacctgttcgatacttcccgatacgtatccggaaagta 7807396  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  7807395 tccaaatattaaattttatttt 7807374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 18300969 - 18301090
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||          |||| ||||||||||| ||||||||    
T  18300969 ctgtgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagta 18301068  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  18301069 tccaaatattaaattttatttt 18301090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 45159418 - 45159308
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 294  Q
    |||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||| ||| || ||||||||||||| | ||||||| | |||||||    
T  45159418 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcaccaatatctgcccgatacgtatctgaagagtattcgaatatta 45159319  T
Q  295 aattttatttt 305  Q
    |||||||||||    
T  45159318 aattttatttt 45159308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 22484267 - 22484385
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||| ||          ||||||||||||||||||||||||||    
T  22484267 tgaagccccgatacttcaaaatggatgatgtaccgtattccctgcgtatcctgcatcgatatctgtccgatacttcccgatacgtatccggagagtatcc 22484366  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  22484367 aaatattaaattttatttt 22484385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 3563851 - 3563957
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    ||||||||||||||||||||||||||||||||  |||||||||   ||| |||||| |||| |||||||||||||||| ||||||||||| || ||||||    
T  3563851 tgaagccccgatacttcaaaatggatgacgtattgtatcccctacatattctgcactgata-cttcccgatacgtatcaggagagtatccgaagattaaa 3563949  T
Q  297 ttttattt 304  Q
    ||||||||    
T  3563950 ttttattt 3563957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 12819298 - 12819388
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatc 285  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| ||||||||||||| ||||||||||    
T  12819298 ctgtgaagccctgatacttcaaaatggatgatgtaccgtatcccctgtgtatcctgc-catatacctgcccgatacgtatcgggagagtatc 12819388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 28746773 - 28746698
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  28746773 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatac 28746698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 22570937 - 22571054
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||          ||||| ||||||||||||| ||||||||    
T  22570937 tgaagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggggagtatcc 22571036  T
Q  287 aaatattaaattttattt 304  Q
    ||||||||||||||||||    
T  22571037 aaatattaaattttattt 22571054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 4561784 - 4561860
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| || |||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||||    
T  4561784 actgtgaagctccaatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatacctgcccgatac 4561860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 35342317 - 35342389
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||    
T  35342317 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctacctgatac 35342389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 4355325 - 4355443
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||          |||||||||||||||| ||||||||| |    
T  4355325 tgaagcctcgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctgcttgatacttcccgatacgtatcaggagagtatgc 4355424  T
Q  287 aaatattaaattttatttt 305  Q
    ||| |||||||||||||||    
T  4355425 aaagattaaattttatttt 4355443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 14824146 - 14824256
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 294  Q
    ||||||| |||||||||||||||| ||||||||| |||||| | || ||||| |||||||||| ||  | |||||||||| | ||||||||| || ||||    
T  14824146 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcaccgatatctgtctgatacgtatcagaagagtatccgaagatta 14824245  T
Q  295 aattttatttt 305  Q
    |||||||||||    
T  14824246 aattttatttt 14824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 1776557 - 1776484
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgat 267  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| || |||| |||||||||||||| ||||||    
T  1776557 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcaccgatacctgcccgat 1776484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 1005512 - 1005576
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  1005512 gtgaagctctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacct 1005576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 305
Target Start/End: Original strand, 2319274 - 2319393
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatc 285  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||          ||||| |||||||||| | ||||||||    
T  2319274 gtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgcaccgatacttgcttgatacttcctgatacgtatcagaagagtatc 2319373  T
Q  286 caaatattaaattttatttt 305  Q
    | || |||||||||||||||    
T  2319374 cgaagattaaattttatttt 2319393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 40536242 - 40536350
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    ||||||||  |||||||||||||| | |||||| ||||| | || ||||||||||||||||||| ||||||||||||| | ||||||||  |  ||||||    
T  40536242 tgaagcccaaatacttcaaaatgggtaacgtactgtatcacatgcgtatcctgcaccgatacctacccgatacgtatcggaagagtatcagatcattaaa 40536341  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  40536342 ttttatttt 40536350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 5588103 - 5588170
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||    
T  5588103 actgtgaagctccgatacttcaaaatggatgacgtatcgtatcctctttgtatcttgcaccgatacct 5588170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 44156597 - 44156715
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||| |||||||||||||||||||||||| || ||||||||||| ||||| |||| ||||||          |||||||||||||||| |||||||||||    
T  44156597 tgaatccccgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgcatcgatacatgtctgatacttcccgatacgtatcaggagagtatcc 44156696  T
Q  287 aaatattaaattttatttt 305  Q
     || |||||||||||||||    
T  44156697 gaagattaaattttatttt 44156715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 24585530 - 24585592
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||    
T  24585530 tgaagccccgatacttcaaaatggatgatgtatcgtat-ccctgcgtatcctgcaccgatacct 24585592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 34146180 - 34146298
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatcc 286  Q
    |||||| ||||||||| ||||||||||||||| ||||||  ||| |||| ||||||||||| ||          |||||||||||||| |||||||||||    
T  34146180 tgaagctccgatactttaaaatggatgacgtatcgtatcttctgcgtattctgcaccgatatctgcctgatacttcccgatacgtatcaggagagtatcc 34146279  T
Q  287 aaatattaaattttatttt 305  Q
    ||| |||||||||||||||    
T  34146280 aaagattaaattttatttt 34146298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 31236307 - 31236190
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||||| |||||||||||| | |||          ||||||||||||||| ||||||||    
T  31236307 ctgtgaagccccgatactttaaaatggataacgtattgtatcccctgcgtatcctgcacccacacctgcatgatatttcccgatacgtatcaggagagta 31236208  T
Q  284 tccaaatattaaatttta 301  Q
    ||| || |||||||||||    
T  31236207 tccgaagattaaatttta 31236190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 14217272 - 14217212
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    |||||| |||||||||||||||||||||||||  |||||||||| |||| |||||||||||    
T  14217272 tgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtattctgcaccgata 14217212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 43214572 - 43214632
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  43214572 tgaagtccagatacttcaaaatggatgacgtatcgtatcccatgtgtatcctgcatcgata 43214632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 15880443 - 15880537
Alignment:
Q  192 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatcc 286  Q
    |||| ||||||||  |||||| ||||| |||||||| || |||  | || ||||| |||||||||||||||| |||||||||| |||||||||||    
T  15880443 cactttgaagcccaaatactttaaaatagatgacgttccatatttcttgcgtatcttgcaccgataccttcctgatacgtatcaggagagtatcc 15880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 37134414 - 37134356
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    |||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||    
T  37134414 aagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcactgata 37134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 40497431 - 40497385
Alignment:
Q  259 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 305  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||    
T  40497431 cttcccgatacgtatcaggagagtatccaaagattaaattttatttt 40497385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 21104482 - 21104542
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  21104482 tgaagccccaatactttaaaatggatgacgtatcgtatcctctgcgtatcttgcaccgata 21104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 8483029 - 8482975
Alignment:
Q  203 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||||||||||| |||||||| |||||||  || ||||||||||||||||    
T  8483029 cccgatacttcaaaatgaatgacgtatcgtatcctttgcgtatcctgcaccgata 8482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 45158244 - 45158134
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||| |  |||||||||||| |||||| || ||||||   |  ||||| |||||  ||||||||||||||| |||| ||||||||||| |  |||    
T  45158244 ctgtgaagcacaaatacttcaaaattgatgacatatcgtatcagatacgtatcatgcactaataccttcccgatacatatcgggagagtatccgacaatt 45158145  T
Q  294 aaattttattt 304  Q
    |||||||||||    
T  45158144 aaattttattt 45158134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 25933560 - 25933621
Alignment:
Q  192 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 253  Q
    |||| ||||||||  |||||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  25933560 cactctgaagcccatatacttcaaaatggatgatgtatcgtatcccctgcgtatcatgcacc 25933621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 12206024 - 12206088
Alignment:
Q  196 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||| ||| ||||| ||||||||||||||| ||||||  ||||||||| |||| ||||||||    
T  12206024 gtgaagctccggtactttaaaatggatgacgtatcgtatcatctgtgtatcttgcatcgatacct 12206088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 35996651 - 35996706
Alignment:
Q  205 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    ||||||||||||||| |||| |||  |||||||||| ||||| |||||||||||||    
T  35996651 cgatacttcaaaatgaatgatgtattgtatcccctgcgtatcttgcaccgatacct 35996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 42183 - 42076
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  42183 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgata-cttcccgatacgtatctagagagtatccaaatattaaa 42085  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  42084 ttttatttt 42076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 8213 - 8092
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  8213 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 8114  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  8113 tccaaatattaaattttatttt 8092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 13862 - 13974
Alignment:
Q  193 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 292  Q
    ||||||||| ||||||||||||||||||||||||||| |||||  ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  13862 actgtgaagtcccgatacttcaaaatggatgacgtactgtatcatctgcgtatcctgcactgttacctacccgatacgtatccggagagtatccaaatat 13961  T
Q  293 taaattttatttt 305  Q
    |||||||| ||||    
T  13962 taaattttttttt 13974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 1036947 - 1036826
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  1036947 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 1036848  T
Q  284 tccaaatattaaattttatttt 305  Q
    || |||||||||||||||||||    
T  1036847 tctaaatattaaattttatttt 1036826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 10894693 - 10894584
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| || |||||||||| |||||||||||||| |||    
T  10894693 ctgtgaagccctgatacttcaaaatggatgacgtaccgtatcccc-gcgtatcatgcaccgatacctgcctgatacgtatcaggagagtatccaaagatt 10894595  T
Q  294 aaattttattt 304  Q
    |||||||||||    
T  10894594 aaattttattt 10894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 3212474 - 3212595
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||           |||||||||||||||||||||||||    
T  3212474 ctgtgaagccccgatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatatctgcccgatacttcccgatacgtatccggagagta 3212573  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  3212574 tccaaatattaaattttatttt 3212595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 8356958 - 8357076
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||| |||||||||    
T  8356958 tgaagtcctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatccgaagagtatcc 8357057  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  8357058 aaatattaaattttatttt 8357076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 32130779 - 32130659
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagtat 284  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||          ||||||||||||||| |||||||||    
T  32130779 tgtgaagccccgatactttaaaatgaatgacgtaccgtatcccctgcgtatcctgcactgatacctgttcgatatttcccgatacgtatcaggagagtat 32130680  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  32130679 ccaaatattaaattttatttt 32130659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 26327152 - 26327227
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  26327152 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctgcccgatac 26327227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 7188894 - 7188779
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 286  Q
    |||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||          ||||| ||||||||||||||||||||||    
T  7188894 tgaagccccgatacttcaaaatggatg---taccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcctgatacgtatccggagagtatcc 7188798  T
Q  287 aaatattaaattttatttt 305  Q
    |||||||||||||||||||    
T  7188797 aaatattaaattttatttt 7188779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 7254928 - 7255037
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 294  Q
    ||||||||  ||||||||||||||||| || ||| ||||||||||||||||| ||||||||||| | ||||||||||||| | ||||||||| || ||||    
T  7254928 tgtgaagcttcgatacttcaaaatggacgatgtatcgtatcccctgtgtatcatgcaccgatacatgcccgatacgtatcagaagagtatccgaagatta 7255027  T
Q  295 aattttattt 304  Q
    ||||||||||    
T  7255028 aattttattt 7255037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 27083982 - 27084102
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||| ||||||||  ||||||||    
T  27083982 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgctcaatacttcccaatacgtataaggagagta 27084081  T
Q  284 tccaaatattaaattttattt 304  Q
    |||||| ||||||||||||||    
T  27084082 tccaaagattaaattttattt 27084102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 31195977 - 31195869
Alignment:
Q  207 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||| |||||||||||||||||||||    
T  31195977 atacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaa 31195878  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  31195877 ttttatttt 31195869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 234306 - 234378
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||| ||||||||    
T  234306 tgaagccccgatacttcaaaatggttgacgtatcgtatctcctgcgtatcctgcaccgatacctgcccgatac 234378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 31079612 - 31079719
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 296  Q
    |||||| ||||||||| |||||||||||||||  |||||||||| |||||||||||||||| |||| ||||| ||||| ||| ||||||  || ||||||    
T  31079612 tgaagctccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgata-cttctcgataagtatcaggatagtatcttaagattaaa 31079710  T
Q  297 ttttatttt 305  Q
    |||||||||    
T  31079711 ttttatttt 31079719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 6708161 - 6708087
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||||||| |||||||||||||||| |||||    
T  6708161 tgtgaagccccgatactttaaaatggatgacatattgtatcccctgtgtatcatgcaccgataccttcctgatac 6708087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 31741267 - 31741168
Alignment:
Q  204 ccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatt 303  Q
    ||||||||||||||||||||||||| ||||||||||  | ||| |||| |||||||| ||||||||||||| ||||||  || |||||| ||||||||||    
T  31741267 ccgatacttcaaaatggatgacgtatcgtatcccctacgcatcatgcatcgatacctgcccgatacgtatcgggagag--tctaaatatcaaattttatt 31741170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 32017986 - 32018049
Alignment:
Q  206 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||||    
T  32017986 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcccgatac 32018049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 25834616 - 25834496
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 284  Q
    |||||| ||||||||||||||| ||||||||||| |||||||| || ||||||||||| |||||           ||| ||||||||||| ||| |||||    
T  25834616 tgtgaaaccccgatacttcaaattggatgacgtatcgtatcccgtgcgtatcctgcactgatacatgcctgatatttctcgatacgtatcaggacagtat 25834517  T
Q  285 ccaaatattaaattttatttt 305  Q
    |||||||||||||||||||||    
T  25834516 ccaaatattaaattttatttt 25834496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 3299139 - 3299204
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| |||  ||||||||||||||||||    
T  3299139 tgtgaagccctgatacttcaaaatagatgatgtaccgtatcctctgcatatcctgcaccgatacct 3299204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 19128153 - 19128225
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||| || |||||| ||||||| ||||||| |||||||||||||||||||||||| |||||  ||||||||    
T  19128153 tgaagctccaatactttaaaatggttgacgtatcgtatcccctgtgtatcctgcaccaatacccgcccgatac 19128225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 29892966 - 29893026
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    |||||||| ||||||| ||||||||||| |||| |||||||||| |||||||||| |||||    
T  29892966 tgaagcccagatactttaaaatggatgatgtactgtatcccctgcgtatcctgcatcgata 29893026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 13607903 - 13607840
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||| ||| ||||||||||||||||||||||| ||||||| |||  |||||||||| |||||||    
T  13607903 tgaatccctgatacttcaaaatggatgacgtatcgtatcctctgcatatcctgcactgatacct 13607840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 13061417 - 13061363
Alignment:
Q  203 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 257  Q
    ||||||||||||||||| |||||||||| ||| | ||| |||||||||| |||||    
T  13061417 cccgatacttcaaaatgaatgacgtaccatattctctgcgtatcctgcatcgata 13061363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 11105286 - 11105347
Alignment:
Q  197 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 258  Q
    |||||| | ||||||| ||||||||||||||||||||| |  || |||||||||| ||||||    
T  11105286 tgaagctctgatactttaaaatggatgacgtaccgtattctttgcgtatcctgcatcgatac 11105347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 5509 - 5630
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  5509 ctgtaaagccccgatacttcaaaatggacgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagta 5608  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  5609 tccaaatattaaattttatttt 5630  T

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Target: scaffold0005 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 44711 - 44616
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||           ||||||||||||||||||||||||||||    
T  44711 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccg-----------atacgtatccggagagtatccaaatatt 44623  T

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Target: scaffold0060 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 30565 - 30444
Alignment:
Q  194 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 283  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||| ||||||| |||||||||          ||||| |||||||||||||||||||    
T  30565 ctgtgaagccccgatacttcaaaatggataacgtaccgtatttcctgcgtatcctacaccgatacctgcccgatacttcctgatacgtatccggagagta 30466  T
Q  284 tccaaatattaaattttatttt 305  Q
    ||||||||||||||||||||||    
T  30465 tccaaatattaaattttatttt 30444  T

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Target: scaffold0285 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 13252 - 13313
Alignment:
Q  199 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 260  Q
    |||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  13252 aagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcaccgatacct 13313  T

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Target: scaffold0240 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 10598 - 10672
Alignment:
Q  195 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 269  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||||| | ||||||||    
T  10598 tgtgaagcccagatactttaaaatggatgatgtaccatatcccctgcgtatcatgcaccgatacttgcccgatac 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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