View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14438_high_33 (Length: 282)
Name: NF14438_high_33
Description: NF14438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14438_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 869186 - 869444
Alignment:
| Q |
19 |
acgtttcccatttagggataagtttgatcaagacaccccacaattttagagtttccacattgactgctgcaccaatgcaatccaactttgatgggctttc |
118 |
Q |
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| T |
869186 |
acgtttcccatttagggataagtttgatcaagacaccccacaattttagagtttccacattgactgctgcaccaatgcaatccaactttgatgggctttc |
869285 |
T |
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| Q |
119 |
atgtataatctcattatcgccaaggttgtccattcgaagctccagatgagagagagacggacctgcaagtgatagccatgaagcaaggccatacacagag |
218 |
Q |
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| T |
869286 |
atgtataatctcattatcgccaaggttgtccattcgaagctccagatgagagagagacggacctgcaagtgatagccatgaagcaaggccatacacagag |
869385 |
T |
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| Q |
219 |
aaagggcagtaaacaactagctcctctaatctctcaacagctgataccattcttctcac |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
869386 |
aaagggcagtaaacaactagctcctctaatctctcaacagctgataccattcttttcac |
869444 |
T |
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