View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14438_high_36 (Length: 266)
Name: NF14438_high_36
Description: NF14438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14438_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 259
Target Start/End: Complemental strand, 17328253 - 17328011
Alignment:
| Q |
17 |
agatgcaattctaacatcaatatttgttttcttcatctcaacattaagaattctctctacaaaaacatctctatttctcaaccttcaaccactttcacta |
116 |
Q |
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| T |
17328253 |
agatgcaattctaacatcaatatttgttttcttcatctcaacattaagaattctctctacaaaaacatctctttttctcaaccttcaaccactttcacta |
17328154 |
T |
|
| Q |
117 |
ccaggcctattcatcacaaccatcctaaacacaataatcatcctcacaataagccttattggaagaatcttaggtggtgctagtttcaacccttcatcca |
216 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
17328153 |
ccaggcttattcatcacaaccatcctaaacacaataatcatcctcacaataagccttattggaagaatcttaggtggtgctagttttaacccttcatcca |
17328054 |
T |
|
| Q |
217 |
caatttccttctatacattaggactaagaccagattcatctct |
259 |
Q |
| |
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||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
17328053 |
caatttccttctacacattaggactaagaccagattcatctct |
17328011 |
T |
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