View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14438_high_40 (Length: 249)
Name: NF14438_high_40
Description: NF14438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14438_high_40 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 12365899 - 12366138
Alignment:
| Q |
3 |
taataacaagagttttggaggtttgtttaaaattaaaatgaaatggtaatgaccaaagtggaattgtatgaaagttaaggggtcgtagtgggtggtgacg |
102 |
Q |
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| T |
12365899 |
taataacaagagttttggaggtttgtttaaaattaaaatgaaatggtgatgaccaaagtggaattgtatgaaagttaaggggtggtggtgggtggtgacg |
12365998 |
T |
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| Q |
103 |
aaagttgtcagtaggtagtgtcagtgtaactttatctttatcctaaagagtctgaactgtgaatcattcattcataattacttccttttaatgcttttgg |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12365999 |
aaagttgtcagtaggtagtgtcagtgtaactttatctttatcctaaagagtctgaactgtgaatcattcattcataattacttccttttaatgcttttgg |
12366098 |
T |
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| Q |
203 |
ccctagcaagacgtgacgtttctgaaacattttatctctg |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
12366099 |
ccctagcaagacgtgacgtttctgaaacattttatctctg |
12366138 |
T |
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