View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14438_low_56 (Length: 201)

Name: NF14438_low_56
Description: NF14438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14438_low_56
NF14438_low_56
[»] chr4 (37 HSPs)
chr4 (1-188)||(27569959-27570146)
chr4 (9-176)||(27415676-27415844)
chr4 (9-188)||(27420451-27420630)
chr4 (9-176)||(27412719-27412886)
chr4 (9-176)||(27425867-27426034)
chr4 (40-175)||(27475528-27475663)
chr4 (66-188)||(27524567-27524689)
chr4 (40-176)||(27503977-27504113)
chr4 (67-188)||(27468303-27468424)
chr4 (1-166)||(27565861-27566026)
chr4 (14-176)||(27423277-27423439)
chr4 (66-187)||(27508896-27509017)
chr4 (67-175)||(27514947-27515055)
chr4 (54-166)||(27563309-27563421)
chr4 (9-187)||(27497240-27497418)
chr4 (35-166)||(27478827-27478958)
chr4 (66-188)||(27506741-27506863)
chr4 (66-181)||(27527211-27527322)
chr4 (83-176)||(17970354-17970447)
chr4 (95-187)||(27490004-27490096)
chr4 (91-188)||(27500338-27500435)
chr4 (66-166)||(27585753-27585853)
chr4 (72-166)||(27485924-27486018)
chr4 (108-171)||(27502824-27502887)
chr4 (117-181)||(27554359-27554423)
chr4 (91-187)||(27557533-27557629)
chr4 (91-176)||(27424514-27424599)
chr4 (91-188)||(27444794-27444891)
chr4 (91-169)||(27460540-27460618)
chr4 (81-147)||(27495620-27495686)
chr4 (91-176)||(27411456-27411541)
chr4 (92-169)||(27473954-27474031)
chr4 (91-148)||(27479984-27480041)
chr4 (92-176)||(27498470-27498554)
chr4 (91-175)||(27540063-27540147)
chr4 (91-139)||(27559240-27559288)
chr4 (92-188)||(27571666-27571762)
[»] chr5 (2 HSPs)
chr5 (40-176)||(1756706-1756842)
chr5 (78-175)||(1754744-1754841)
[»] chr3 (12 HSPs)
chr3 (85-171)||(38043963-38044049)
chr3 (91-176)||(50904792-50904877)
chr3 (78-176)||(50910015-50910113)
chr3 (83-176)||(55084841-55084934)
chr3 (84-176)||(38040074-38040166)
chr3 (85-176)||(50911863-50911954)
chr3 (90-176)||(38036792-38036878)
chr3 (84-176)||(38024868-38024960)
chr3 (84-176)||(38028759-38028851)
chr3 (84-176)||(38031320-38031412)
chr3 (83-169)||(48840704-48840789)
chr3 (83-176)||(38033767-38033864)
[»] chr8 (3 HSPs)
chr8 (83-171)||(21634603-21634691)
chr8 (81-171)||(21607286-21607376)
chr8 (84-176)||(21604747-21604839)
[»] chr2 (1 HSPs)
chr2 (83-176)||(3073624-3073717)


Alignment Details
Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 27569959 - 27570146
Alignment:
Q  1 aaatatcactactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27569959 aaatatcactactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaat 27570058  T
Q  101 ggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatgat 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27570059 ggtgaggccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaagtatgat 27570146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 27415844 - 27415676
Alignment:
Q  9 ctactaaactatgtcagtctcttctg-gtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatg 107  Q
    ||||||||||||||||||||||| |  ||||||||||||||| ||||||| |||||||||||| |||||||||| |||||| |||||||||||||||| |    
T  27415844 ctactaaactatgtcagtctcttttttgtgttagattcatattccgttcaagcgagatgttatgtgttgaaagacatcttctgtgcaaggaatggtgagg 27415745  T
Q  108 ccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| || ||||||    
T  27415744 ccacccatggaatgatcatatccaaactcttcctcagcttgactcaacaagtcttgaaacgatggttgg 27415676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 27420630 - 27420451
Alignment:
Q  9 ctactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgc 108  Q
    ||||||||||||||||| ||||| |||| | ||||||||| ||| || | || ||| |||||||||||||||| |||||| |||||||||||||||| ||    
T  27420630 ctactaaactatgtcagactcttttggtctcagattcatagcccattgaagcaagaagttatatgttgaaagacatcttccgtgcaaggaatggtgaggc 27420531  T
Q  109 cacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatgat 188  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| || ||||||    
T  27420530 cacccatgggatgatcatatccaaactcttcctcaacttgactcagcaagccttgaaatgaaggttggctcaagtatgat 27420451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 27412886 - 27412719
Alignment:
Q  9 ctactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgc 108  Q
    |||||||||||||||||| |||| |||||| ||||||||| ||| |||  ||||||||||||||||||||||| |||||| |||||||||||||||| ||    
T  27412886 ctactaaactatgtcagtttcttttggtgtcagattcatagcccattcgagcgagatgttatatgttgaaagacatcttccgtgcaaggaatggtgaggc 27412787  T
Q  109 cacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||  |||||||||||| | ||||||    
T  27412786 cacccattggatgatcatatccaaactcttcttcagcttgactcaataagtcttgaaataatggttgg 27412719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 27426034 - 27425867
Alignment:
Q  9 ctactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgc 108  Q
    |||||||||||||||||||| || |||||| |||||||||  || |||| ||||||||| ||||||||||| | ||| ||||||||||||||||||| ||    
T  27426034 ctactaaactatgtcagtctgttttggtgtcagattcataggccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggc 27425935  T
Q  109 cacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||  |||||||||||||| ||||||    
T  27425934 cacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttgg 27425867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 27475528 - 27475663
Alignment:
Q  40 agattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttc 139  Q
    ||||||||| ||| |||| || ||| ||||||||||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  27475528 agattcatagcccattcaagcaagaagttatatgttggaagacatcttcggagcaaggaatggtgaggccacccatgggatgatcatatccaaactcttc 27475627  T
Q  140 ctcagcttgactcagcaagtcttgaaatgaaggttg 175  Q
    ||| |||||||||| |||||||||||||||||||||    
T  27475628 ctcggcttgactcaacaagtcttgaaatgaaggttg 27475663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 27524689 - 27524567
Alignment:
Q  66 gttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaa 165  Q
    ||||||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  27524689 gttatatgttggaagacatcttcggtgcacggaatggtgaggccacccattggatgatcatatccaaactcttcctcagcttgattcaacaagtcttgaa 27524590  T
Q  166 atgaaggttggcttaaatatgat 188  Q
    ||||||||||| | |||||||||    
T  27524589 atgaaggttggttcaaatatgat 27524567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 40 - 176
Target Start/End: Complemental strand, 27504113 - 27503977
Alignment:
Q  40 agattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttc 139  Q
    |||||||||  || |||| || ||| ||||| ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  27504113 agattcatagtccattcaagcaagaagttatgtgttggaagacatcttcggtgcaaggaatggtgaggccacccattggatgatcatatccaaactcttc 27504014  T
Q  140 ctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||| |||||||||| ||||||||||||||||||||||    
T  27504013 ctcggcttgactcaacaagtcttgaaatgaaggttgg 27503977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 27468303 - 27468424
Alignment:
Q  67 ttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaa 166  Q
    |||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||| || |||||||| | |||||||| ||||||||||||    
T  27468303 ttatatgttggaagacatcttccgtgcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcctcggattgactcaacaagtcttgaaa 27468402  T
Q  167 tgaaggttggcttaaatatgat 188  Q
    |||||||||| |||| ||||||    
T  27468403 tgaaggttggtttaagtatgat 27468424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 27565861 - 27566026
Alignment:
Q  1 aaatatcactactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaat 100  Q
    ||||||| ||||||||||||||||||||  | ||||||||| ||||||  || |||| || ||| ||||||||||| |||| |||||||   ||||||||    
T  27565861 aaatatccctactaaactatgtcagtctaatttggtgttaggttcatagtccattcaagcaagaagttatatgttggaagacatcttcgccacaaggaat 27565960  T
Q  101 ggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaa 166  Q
    ||||| ||||||||| ||||||||||||||   |||||||||| ||||  ||||||||||||||||    
T  27565961 ggtgaggccacccattggatgatcatatccatgctcttcctcaacttgtatcagcaagtcttgaaa 27566026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 27423439 - 27423277
Alignment:
Q  14 aaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgccaccc 113  Q
    |||||| || ||||| || ||||||| ||||||||  || |||| | |||| ||||||||||| || | |||||| |||||||||| ||||| |||||||    
T  27423439 aaactacgttagtctattttggtgtttgattcatagtccattcaagtgagaagttatatgttggaaaacatcttccgtgcaaggaacggtgaggccaccc 27423340  T
Q  114 atgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||||||||  || || ||||||||||| |||||||||| ||| ||||||||||||||||||    
T  27423339 atgggatgattgtaaccaaactcttcctcggcttgactcaacaattcttgaaatgaaggttgg 27423277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 27509017 - 27508896
Alignment:
Q  66 gttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaa 165  Q
    ||||||||||| || | |||||||| ||| |||||||||| ||||||| | |||||||||||||| |||||||||||||| ||| ||| |||||||||||    
T  27509017 gttatatgttggaacacatcttcggagcatggaatggtgaggccacccgttggatgatcatatccaaactcttcctcagcctgattcaacaagtcttgaa 27508918  T
Q  166 atgaaggttggcttaaatatga 187  Q
    ||||||||||| | ||||||||    
T  27508917 atgaaggttggttcaaatatga 27508896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 27515055 - 27514947
Alignment:
Q  67 ttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaa 166  Q
    ||||||| || |||| |||||| || ||||||||||||| |||||||||||||||||||||||| || |||||||| | |||||||| ||||||||||||    
T  27515055 ttatatgctggaagacatcttctgtacaaggaatggtgaggccacccatgggatgatcatatccaaattcttcctcggattgactcaacaagtcttgaaa 27514956  T
Q  167 tgaaggttg 175  Q
    |||||||||    
T  27514955 tgaaggttg 27514947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 27563309 - 27563421
Alignment:
Q  54 ttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactca 153  Q
    |||| |||||| |||||||||||||||  |||||| ||||||||||| |||| ||||||||| |||||||||||||| |||||||| || ||||||||||    
T  27563309 ttcaagcgagaagttatatgttgaaaggcatcttcagtgcaaggaattgtgaggccacccattggatgatcatatccaaactcttcttcggcttgactca 27563408  T
Q  154 gcaagtcttgaaa 166  Q
    |||| ||||||||    
T  27563409 gcaaatcttgaaa 27563421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 27497240 - 27497418
Alignment:
Q  9 ctactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgc 108  Q
    ||||||||||| |||||||||||     || | ||| ||| ||| |||| |||||| |||||  |||| |||| || ||| |||||||||||||||| ||    
T  27497240 ctactaaactacgtcagtctctttccacgtgaaatttatagcccattcaagcgagaagttatgcgttggaagacattttcagtgcaaggaatggtgaggc 27497339  T
Q  109 cacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatga 187  Q
    ||||  |||||||||||||||| |||||||||||||||||||||| ||| | ||||||  | |||||| |||| |||||    
T  27497340 cacctgtgggatgatcatatccaaactcttcctcagcttgactcaacaaatattgaaacaatggttggtttaagtatga 27497418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 27478827 - 27478958
Alignment:
Q  35 gtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaac 134  Q
    |||| ||| ||||| ||| |||| || ||| ||||||||||| || | |||||||| |||||||||||||| |||||||||||||||||||||||| ||     
T  27478827 gtgtaagaatcatagcccattcaagcaagaagttatatgttggaacacatcttcggagcaaggaatggtgaggccacccatgggatgatcatatccaaat 27478926  T
Q  135 tcttcctcagcttgactcagcaagtcttgaaa 166  Q
    ||||| || ||||||   ||||| ||||||||    
T  27478927 tcttcttccgcttgatgtagcaattcttgaaa 27478958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 27506863 - 27506741
Alignment:
Q  66 gttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaa 165  Q
    ||||| |||||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||| || ||||| || ||||||   ||||| |||||||    
T  27506863 gttatgtgttgaaagacatcttcagtgcaaggaatggtgagtccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaa 27506764  T
Q  166 atgaaggttggcttaaatatgat 188  Q
    |  | |||||| |||| ||||||    
T  27506763 acaatggttggtttaagtatgat 27506741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 27527322 - 27527211
Alignment:
Q  66 gttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaa 165  Q
    ||||||||||| |||| ||||||  |||||||||| | |||    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||    
T  27527322 gttatatgttggaagacatcttcactgcaaggaattgggat----cccatgggatgatcatatccaaactcttcctcagcttgactcagcaactctagaa 27527227  T
Q  166 atgaaggttggcttaa 181  Q
    | || |||||| ||||    
T  27527226 acgatggttggtttaa 27527211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 17970447 - 17970354
Alignment:
Q  83 atcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||||| ||||||||||| |||| ||||||||| |||||||| |||||||| |||||||| ||  |||||||||||| ||||||||||| ||||    
T  17970447 atcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttgg 17970354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 27490096 - 27490004
Alignment:
Q  95 aggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatga 187  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||| ||| ||| ||||||||||| |||| | |||| |||||    
T  27490096 aggaatggtgaggccacccattggatgatcatatccaaactcttcctcggcttgattcaacaaatcttgaaatgatggtttgtttaagtatga 27490004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 27500338 - 27500435
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatgat 188  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||| ||| |||| ||| |||||||| ||||| ||||||  |||| |||| ||||||    
T  27500338 tgcaaggaatagtgatgccacccattggatggtcatatccgaactgttcttcagattggctcagcaattcttggaatgaactttggtttaagtatgat 27500435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 27585853 - 27585753
Alignment:
Q  66 gttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaa 165  Q
    ||||||||||  |||  |||||| ||||||||||||||||  || ||||| |||||||||||||| |||||||| || |||||||||| ||| |||||||    
T  27585853 gttatatgtttgaaggcatcttctgtgcaaggaatggtgagacctcccattggatgatcatatccaaactcttcttcggcttgactcatcaaatcttgaa 27585754  T
Q  166 a 166  Q
    |    
T  27585753 a 27585753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 27485924 - 27486018
Alignment:
Q  72 tgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaa 166  Q
    ||||||||||   |||| |||||||||||||||| |||||||||||||||||||||||| || ||||| || ||||||   ||||| ||||||||    
T  27485924 tgttgaaagacgccttcagtgcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaa 27486018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 27502824 - 27502887
Alignment:
Q  108 ccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaag 171  Q
    |||||||| ||||| |||||||| || |||||| ||||||| ||||||||||||||||||||||    
T  27502824 ccacccattggatggtcatatccaaattcttccacagcttggctcagcaagtcttgaaatgaag 27502887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 27554423 - 27554359
Alignment:
Q  117 ggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaa 181  Q
    |||||||||||||| || | ||||||||||||| ||||||| |||||||| || |||||||||||    
T  27554423 ggatgatcatatccaaattgttcctcagcttgattcagcaattcttgaaacgatggttggcttaa 27554359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 27557629 - 27557533
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatga 187  Q
    |||| ||||| ||||  |||||||| |||||| ||||| | || | ||||||||||||| ||||||| ||||||||||| |||||| |||| |||||    
T  27557629 tgcatggaatagtgagaccacccattggatgaacatattcaaattgttcctcagcttgattcagcaattcttgaaatgatggttggtttaagtatga 27557533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 27424514 - 27424599
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||| |||||||| |  |||||||| ||||||||||||||  | ||||| |||| |||| | ||||| ||||||||||||||||||    
T  27424514 tgcacggaatggtaagaccacccattggatgatcatatccatattcttcttcagattgatttagcaattcttgaaatgaaggttgg 27424599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 27444794 - 27444891
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatgat 188  Q
    |||||||||| ||||  |||||||| ||||| ||||||||||| | |||||| |||||| |||  || ||||||||||| | |||||| || ||||||    
T  27444794 tgcaaggaattgtgagaccacccattggatggtcatatccgaattgttcctcggcttgattcaataattcttgaaatgatgattggctcaagtatgat 27444891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 27460618 - 27460540
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatga 169  Q
    |||||||||||||||  |||||||| |||||||||||| | || | |||||||  ||| |||||||| ||||| |||||    
T  27460618 tgcaaggaatggtgagaccacccattggatgatcatattcaaattgttcctcactttggctcagcaattcttggaatga 27460540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 27495686 - 27495620
Alignment:
Q  81 atatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagctt 147  Q
    ||||||||  |||||||||||||||  |||||||| ||||||| | |||| |||||||| |||||||    
T  27495686 atatcttctctgcaaggaatggtgagaccacccattggatgattaaatccaaactcttcttcagctt 27495620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 27411456 - 27411541
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||||||||| ||||  |||||||| |||||||||||||| || ||||| || |||||| | || || |||||||| || ||||||    
T  27411456 tgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaacgatggttgg 27411541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 27474031 - 27473954
Alignment:
Q  92 gcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatga 169  Q
    ||||||||||||||  |||||||| |||||||||||| | || | |||||||  ||| |||||||| ||||| |||||    
T  27474031 gcaaggaatggtgagaccacccattggatgatcatattcaaattgttcctcactttggctcagcaattcttggaatga 27473954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 27480041 - 27479984
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttg 148  Q
    |||||||||||||||  |||||||| |||||||||||| | || | ||||||||||||    
T  27480041 tgcaaggaatggtgagaccacccattggatgatcatattcaaattgttcctcagcttg 27479984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 27498554 - 27498470
Alignment:
Q  92 gcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||||||| ||||  |||||||| |||||||||||| |||| | |||||| |||||  ||| ||||||||| || || ||||||    
T  27498554 gcaaggaatagtgagaccacccattggatgatcatattcgaattgttcctcggcttggttcaacaagtcttggaacgatggttgg 27498470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 27540147 - 27540063
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttg 175  Q
    ||||||||||||| |  |||||||| |||||||  || || || |||||||| || |  || |||||||||||||||||||||||    
T  27540147 tgcaaggaatggttagtccacccattggatgatggtacccaaattcttcctctgccttgcttagcaagtcttgaaatgaaggttg 27540063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 27559240 - 27559288
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttc 139  Q
    |||||||||| ||||  |||||||| |||||||||||||| ||||||||    
T  27559240 tgcaaggaattgtgagaccacccattggatgatcatatccaaactcttc 27559288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 27571762 - 27571666
Alignment:
Q  92 gcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaaatatgat 188  Q
    ||||||||| ||||  |||||||| |||||||||||||| || ||||| || | |||| | || || |||||||| || || ||||| |||||||||    
T  27571762 gcaaggaattgtgagaccacccattggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaacgatggctggctcaaatatgat 27571666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 1756706 - 1756842
Alignment:
Q  40 agattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttc 139  Q
    ||||||||| ||| |||| || ||| || |||||||| |||  ||||||||||||||||||||||| |||||||||||| ||||||||||| || |||||    
T  1756706 agattcatagcccattcaagcaagaggtaatatgttggaaggcatcttcggtgcaaggaatggtgaggccacccatggggtgatcatatccaaattcttc 1756805  T
Q  140 ctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
     ||||||||||||| ||||| |||||| || ||||||    
T  1756806 ttcagcttgactcaacaagtattgaaacgatggttgg 1756842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 1754841 - 1754744
Alignment:
Q  78 aagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttg 175  Q
    |||| |||||| |||||| ||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||| ||||  |||||| || |||||    
T  1754841 aagacatcttctgtgcaaagaatggtgaggccacccattggatgatcatatccaaactcttccgcagcttgactcaacaaggattgaaacgatggttg 1754744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 8e-23; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 38044049 - 38043963
Alignment:
Q  85 cttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaag 171  Q
    |||||||||||||||| |||| ||| ||||| |||||||||||||| || |||||||| ||||||||||||||||||||||| ||||    
T  38044049 cttcggtgcaaggaattgtgaggccgcccattggatgatcatatccaaattcttcctctgcttgactcagcaagtcttgaaacgaag 38043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 50904792 - 50904877
Alignment:
Q  91 tgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| || ||||| ||| |||||| ||||||||||||||||| ||||    
T  50904792 tgcaaggaatggtgaggccacccattggatgatcatatccgaattcatcctctgctcgactcaacaagtcttgaaatgaagtttgg 50904877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 50910113 - 50910015
Alignment:
Q  78 aagatatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||| |||||| ||||||||||| |||| ||||||||| |||||||||||||| || ||||||||  ||||| ||| ||||| ||||||||||| ||||    
T  50910113 aagacatcttctgtgcaaggaattgtgaggccacccattggatgatcatatccaaattcttcctccacttgattcaacaagttttgaaatgaagcttgg 50910015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 55084934 - 55084841
Alignment:
Q  83 atcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||||| ||||||||||| |||| ||||||||| |||||||| ||||| || |||||||| ||  |||||| ||||||||||||||| ||||||    
T  55084934 atcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccaaattcttcctccgcccgactcaacaagtcttgaaatgatggttgg 55084841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 38040074 - 38040166
Alignment:
Q  84 tcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||| ||||||||||| |||| ||| ||||| ||||| ||||||||||| |||||||| |||||||||| || || ||||||||||| ||||    
T  38040074 tcttctgtgcaaggaattgtgaggccgcccattggatggtcatatccgaattcttcctcggcttgactcaacaggttttgaaatgaagcttgg 38040166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 50911863 - 50911954
Alignment:
Q  85 cttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||| ||||||||||| || | ||||||||| || ||||||||||| || |||||||| |||||||||| ||||| ||||||||||| ||||    
T  50911863 cttctgtgcaaggaattgttaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaacaagttttgaaatgaagcttgg 50911954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 38036792 - 38036878
Alignment:
Q  90 gtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||||||||| |||| ||| ||||| ||||| ||||||||||| |||||||| |||||||||| ||| | ||||||||||| ||||    
T  38036792 gtgcaaggaattgtgaggccgcccattggatggtcatatccgaattcttcctcggcttgactcaacaaattttgaaatgaagcttgg 38036878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 38024868 - 38024960
Alignment:
Q  84 tcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||| ||||||||||| |||| ||||||||| || ||||||||||| || |||||||| ||||||||||  |||| |||||| |||| ||||    
T  38024868 tcttctgtgcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttgg 38024960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 38028759 - 38028851
Alignment:
Q  84 tcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||| ||||||||||| |||| ||| ||||| ||||| |||||||| || |||||||| |||||||||| || || ||||||||||| ||||    
T  38028759 tcttctgtgcaaggaattgtgaggccgcccattggatggtcatatccaaattcttcctcggcttgactcaacaggttttgaaatgaagcttgg 38028851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 38031320 - 38031412
Alignment:
Q  84 tcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||| ||||||||||| |||| ||||||||| || ||||||||||| || |||||||| ||||||||||  |||| |||||| |||| ||||    
T  38031320 tcttctgtgcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttgg 38031412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 48840704 - 48840789
Alignment:
Q  83 atcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatga 169  Q
    |||||| ||||||||||| |||| ||||||||| |||||||||||||| || |||| |||  ||| ||||| |||||||||||||||    
T  48840704 atcttctgtgcaaggaattgtgaggccacccattggatgatcatatccaaattctttctccactt-actcaacaagtcttgaaatga 48840789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 38033767 - 38033864
Alignment:
Q  83 atcttcggtgcaaggaatggtgatgccacccatg----ggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||||| ||||| ||||| |||||||| |||||     ||||| |||||||| || |||||||| |||||||||| ||||| ||||||||||| ||||    
T  38033767 atcttctgtgcagggaattgtgatgccgcccattaattggatggtcatatccaaattcttcctcggcttgactcaacaagttttgaaatgaagcttgg 38033864  T

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Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 21634691 - 21634603
Alignment:
Q  83 atcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaag 171  Q
    |||||||||||||||||| |||| ||| |||||  ||||||||||||| || |||||||| ||||||||||||||||||||||| ||||    
T  21634691 atcttcggtgcaaggaattgtgaagccgcccattcgatgatcatatccaaattcttcctctgcttgactcagcaagtcttgaaacgaag 21634603  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 21607286 - 21607376
Alignment:
Q  81 atatcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaag 171  Q
    |||||||| ||||||||||  |||| ||||||||| || ||||||||||| || |||||||| ||||||||||  |||| |||||| ||||    
T  21607286 atatcttctgtgcaaggaaccgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaag 21607376  T

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Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 21604747 - 21604839
Alignment:
Q  84 tcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    ||||| ||||||||||| |||| ||| ||||| ||||| |||||||| || ||||||||  ||||||||| || || ||||||||||| ||||    
T  21604747 tcttctgtgcaaggaattgtgaggccgcccattggatggtcatatcctaattcttcctcgtcttgactcaacatgttttgaaatgaagcttgg 21604839  T

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Target: chr2 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 3073717 - 3073624
Alignment:
Q  83 atcttcggtgcaaggaatggtgatgccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttgg 176  Q
    |||||| ||||||||||| |||| ||||||||| |||||||| |||||||| |||||||| ||  |||||||||||| ||||||||||| ||||    
T  3073717 atcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttgg 3073624  T

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