View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14440_low_1 (Length: 456)
Name: NF14440_low_1
Description: NF14440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14440_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 2 - 441
Target Start/End: Complemental strand, 11240796 - 11240357
Alignment:
| Q |
2 |
tatagcaatttaagtttggctaactcggcttaatagcatagttttataagattacctgccaattttgctgttcaatgctcgactttttcttgtaaaacgc |
101 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
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| T |
11240796 |
tatagcaatttaagtttggctaactctgcttaatagcatagttttataagattacctgccaattttgttgttcaatgctcgactttttcttgtaaaatgc |
11240697 |
T |
|
| Q |
102 |
agcctctcgaaacaacaaaacccgcttccaagcctcctgattactgcaagccctccacttcggcttttcagggatcggaacaatttcaggatcacaaggg |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11240696 |
agcctctcgaaacaacaaaacccgcttccaagcctcctgattactgtaagccctccacttcggcttttcagggatcggaacaatttcaggatcacaaggg |
11240597 |
T |
|
| Q |
202 |
ttactcgcggtttttgtaacccaactcatcatatcaaacagagcctcctctctcttcctcttatgactagaacctgttccatcaccaccagacaaatcca |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11240596 |
ttactcgcggtttttgtaacccaactcatcatatcaaacagagcctcctctctctttctcttatgactagaacctgttccatcaccaccagacaaatcca |
11240497 |
T |
|
| Q |
302 |
atactgggacactattatcaccgatatcaccatcatgattctcaccaacattcagcaatccagactcactgctcttcaccaaatcagacgcatcctcagt |
401 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |
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| T |
11240496 |
ataccgggacactattatcaccgatatcaccatcatgattctcgccaacattcagcaatccagactcatcgctcttcaccaaattagatgcatcctcagt |
11240397 |
T |
|
| Q |
402 |
tgtccctacaattattttccctccatcaaaatcttcaact |
441 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
11240396 |
tgtccctacaattattttccctccatcaaaatcttcaact |
11240357 |
T |
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