View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14445_high_28 (Length: 383)
Name: NF14445_high_28
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14445_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 9039072 - 9038742
Alignment:
| Q |
1 |
atacatataaacctattgagctaccgaagctcaacttttactttctaattgaccaaccaataaagggttcaaagatataaaatcaatctttttaacccta |
100 |
Q |
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| T |
9039072 |
atacatataaacctattgagctaccgaagctcaacttttactttctaattgaccaaccaataaagggttcaaagatataaaatcaatctttttaacccta |
9038973 |
T |
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| Q |
101 |
tatactaaaatataaacaaaggaccattatgtcattggatgcttccaacacccaagacataatcaatagttgaattactctagaaggtagaatccaaagt |
200 |
Q |
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| T |
9038972 |
tgtactaaaatataaacaaaggaccattatgtcattggatgcttccaacacccaagacataatcaatagttgaattactctagaaggtagaatccaaagt |
9038873 |
T |
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| Q |
201 |
ttaaataatcagattctaccctatgctgaatacatgaatgaatatgatcttccctacatctattttttaagnnnnnnnnncctattttcctaaaataaaa |
300 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |
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| T |
9038872 |
ttaaataattagattctaccctatgctgaatacatgaatgaatatgatcttccctacatctattttaaaaaaaaaaaaaacctattttcctaaaat-aaa |
9038774 |
T |
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| Q |
301 |
aacccttatgatgatcatgatgatgatggtga |
332 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
9038773 |
aacccttatgatgatcatgatgatgatggtga |
9038742 |
T |
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