View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14445_high_32 (Length: 348)
Name: NF14445_high_32
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14445_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 26816368 - 26816694
Alignment:
| Q |
1 |
ttggaagaaaaaacgagggaagtttgtataacagtaacaaaagcttgaaatttgacatgctagtgtttcacaatggagccgttcacttcatctcagattg |
100 |
Q |
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| T |
26816368 |
ttggaagaaaaaacgagggaagtttgtataacagtaacaaaagcttgaaatttgacatgccagtgtttcacaatggagccgttcacttcatctcagattg |
26816467 |
T |
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| Q |
101 |
ttttccttacgtggaaaaaggccgtccttattttaggtcgtccaattgtgaaacaatgtttagaataaaacaatgttgatggtgacgaaagaaccaaggc |
200 |
Q |
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| T |
26816468 |
ttttccttacgtggaaaaaggccgtccttattttaggtcgtccaattgtgaaacaatgttgagaataaaacaatgttgatggtgacgaaagagccaaggc |
26816567 |
T |
|
| Q |
201 |
agggttcacatgataaaagttgttgcatggaaatttttaaatcgggaaaagtcggcggttcaactcaatctatttgtatggtgagattaaggaagtgtgt |
300 |
Q |
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| T |
26816568 |
agggttcacatgataaaagttgttgcatggaaa-ttttatattgggaaaagtcggcgggtcaactcaatctatttgtatggtgagattaaggaagtgtgt |
26816666 |
T |
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| Q |
301 |
gtttacagtat-ggttttaaccaagtat |
327 |
Q |
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||||||||||| |||||||||||||||| |
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| T |
26816667 |
gtttacagtatgggttttaaccaagtat |
26816694 |
T |
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