View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14445_high_52 (Length: 253)
Name: NF14445_high_52
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14445_high_52 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 14 - 228
Target Start/End: Complemental strand, 28719071 - 28718857
Alignment:
| Q |
14 |
caaagggatatatagtaatatgaaggaaggtgccaaaagaagtctctggaaactccctgttctttctctcctcctaatttccttattccaaacgttcaca |
113 |
Q |
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| T |
28719071 |
caaagggatatatagtaatatgaaggaaggtgccaaaagaagtctctggaaactccctgttctttctctcctcctaatttccttattccaaacgttcaca |
28718972 |
T |
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| Q |
114 |
taacgcaaccatcccccgaccttaatttaaaaattaatctaattggccatatatgttttaatttaaataatttcatcaatacaatattttgtcttaaact |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28718971 |
taacgcaaccatcccccgaccttaatttaaaaattaatctaattagccatatatgttttaatttaaataatttcatcaatacaatattttgtcttaaact |
28718872 |
T |
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| Q |
214 |
taaatatatgattac |
228 |
Q |
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||||||||||||||| |
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| T |
28718871 |
taaatatatgattac |
28718857 |
T |
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