View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14445_high_8 (Length: 585)
Name: NF14445_high_8
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14445_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 518; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 13 - 554
Target Start/End: Original strand, 36157187 - 36157728
Alignment:
| Q |
13 |
aatattgacaagtgaaggaaacagatagagagaataatgatacgcatgttgaacttataccatgaaaattcaattgatatgcagcaaaaatgtaaaatat |
112 |
Q |
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| T |
36157187 |
aatattgacaagtgaaggaaacagatagagagaataatgatacgcatgttgaacttataccatgaaaattcaattgatatgcagcaaaaatgtaaaataa |
36157286 |
T |
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| Q |
113 |
tttttacactatcaaataattgttctcttgtacatacaattttctcttgttgattactatatgtatatatcttacctcttctccaacagcttggaaacaa |
212 |
Q |
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| T |
36157287 |
tttttacactatcaaataattgttctcttgtacgtacaattttctcttgttgattactatatgtatatatcttacctcttctccaacagcttggaaacaa |
36157386 |
T |
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| Q |
213 |
aaattgtctgtacaagaaaccctagcttccagcactgtaagcctcatctcttcaatggcttcaagtattgaaacaagcataccttggctgctttttgctg |
312 |
Q |
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| T |
36157387 |
aaattgtctgtacaagaaaccctagcttccagcactgtaagcctcatctcttcaatggcttcaagtattgaaacaagcataccttggctgctttttgctg |
36157486 |
T |
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| Q |
313 |
aaaaaacgtttataagaaatcccttttctagggttttagctgtaacctgcacaagtccatccataaaatccatttcaaatttcatacttgcaagatctta |
412 |
Q |
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| T |
36157487 |
aaaaaacgtttataagaaatcccttttctagggtttcaactgtaacctgcacgagtccatccataaaatccatttcaaatttcatacttgcaagatctta |
36157586 |
T |
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| Q |
413 |
gaacacattgacttgatgatcaacatacatagtatgtatgtatatttatatgagaaattgtttacaataactggaaattaaagatcccaagaaagagaaa |
512 |
Q |
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| T |
36157587 |
gaacacattgacttgatgatcaacatacatagtatgtatgtatatttatatgagaaattgtttacaataactggaaattaaagatcccaagatagagaaa |
36157686 |
T |
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| Q |
513 |
aaatgtgaattaactctgcgtcgagttatttagggtcaagac |
554 |
Q |
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| T |
36157687 |
aaatgtgaattaactctgcgtcgagttatttagggtcaagac |
36157728 |
T |
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