View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14445_low_1 (Length: 1268)

Name: NF14445_low_1
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14445_low_1
NF14445_low_1
[»] chr6 (13 HSPs)
chr6 (281-849)||(31151926-31152492)
chr6 (1-203)||(22981841-22982043)
chr6 (1-203)||(23806365-23806567)
chr6 (1132-1235)||(4183395-4183498)
chr6 (1132-1235)||(4744236-4744339)
chr6 (652-849)||(22981504-22981710)
chr6 (652-849)||(23806698-23806904)
chr6 (590-773)||(1111378-1111564)
chr6 (49-138)||(1105112-1105201)
chr6 (1047-1079)||(4183304-4183336)
chr6 (1047-1079)||(4744148-4744180)
chr6 (1193-1238)||(9820341-9820386)
chr6 (1193-1238)||(24417914-24417959)
[»] chr1 (14 HSPs)
chr1 (850-1249)||(51858155-51858554)
chr1 (634-849)||(29706854-29707069)
chr1 (864-1079)||(51763047-51763261)
chr1 (850-1082)||(51854665-51854895)
chr1 (882-1081)||(51756885-51757081)
chr1 (1117-1239)||(51763298-51763417)
chr1 (1040-1082)||(51221494-51221536)
chr1 (1121-1241)||(51829299-51829416)
chr1 (914-1003)||(51221368-51221457)
chr1 (1192-1241)||(51381897-51381946)
chr1 (674-766)||(27642132-27642225)
chr1 (1193-1241)||(51831942-51831990)
chr1 (1121-1159)||(51854588-51854626)
chr1 (1033-1082)||(51381738-51381787)
[»] chr5 (11 HSPs)
chr5 (452-849)||(33807820-33808213)
chr5 (452-849)||(33811474-33811867)
chr5 (452-849)||(33816392-33816785)
chr5 (1-294)||(33811015-33811307)
chr5 (1-294)||(33815933-33816225)
chr5 (671-766)||(16698504-16698601)
chr5 (1193-1238)||(20292558-20292603)
chr5 (1193-1238)||(20301006-20301051)
chr5 (1193-1238)||(20305419-20305464)
chr5 (1193-1238)||(20309823-20309868)
chr5 (671-766)||(22763905-22764002)
[»] chr3 (21 HSPs)
chr3 (443-849)||(50602993-50603403)
chr3 (1-242)||(54967873-54968114)
chr3 (599-849)||(54967210-54967477)
chr3 (652-849)||(44782524-44782733)
chr3 (599-766)||(39298736-39298908)
chr3 (652-768)||(18556392-18556511)
chr3 (593-697)||(31725346-31725448)
chr3 (652-837)||(54979854-54980051)
chr3 (1196-1238)||(13497787-13497829)
chr3 (671-770)||(17645800-17645897)
chr3 (1193-1238)||(771957-772002)
chr3 (1193-1238)||(2455421-2455466)
chr3 (1193-1238)||(9595052-9595097)
chr3 (1031-1082)||(43997281-43997332)
chr3 (1193-1239)||(13526167-13526213)
chr3 (1193-1238)||(2474701-2474746)
chr3 (1183-1236)||(2476235-2476288)
chr3 (1193-1230)||(9562386-9562423)
chr3 (797-849)||(17645928-17645981)
chr3 (1193-1238)||(23231419-23231464)
chr3 (1198-1239)||(23239959-23240000)
[»] chr7 (13 HSPs)
chr7 (1-295)||(4836159-4836448)
chr7 (64-242)||(24379927-24380105)
chr7 (652-849)||(4842648-4842857)
chr7 (599-852)||(4835572-4835840)
chr7 (599-849)||(25857131-25857395)
chr7 (652-768)||(13465046-13465165)
chr7 (589-758)||(8252686-8252853)
chr7 (671-766)||(27341025-27341120)
chr7 (654-775)||(17845847-17845969)
chr7 (652-766)||(24379370-24379487)
chr7 (799-849)||(24380113-24380163)
chr7 (700-766)||(38994151-38994218)
chr7 (779-852)||(24379276-24379347)
[»] scaffold0479 (2 HSPs)
scaffold0479 (1-242)||(2033-2274)
scaffold0479 (652-849)||(2727-2936)
[»] scaffold0045 (1 HSPs)
scaffold0045 (599-831)||(26516-26752)
[»] chr8 (3 HSPs)
chr8 (599-849)||(41481548-41481815)
chr8 (599-849)||(36167547-36167813)
chr8 (655-844)||(18951129-18951326)
[»] chr4 (4 HSPs)
chr4 (599-849)||(9757212-9757480)
chr4 (671-768)||(37286972-37287069)
chr4 (654-766)||(42682924-42683038)
chr4 (1-185)||(25003544-25003713)
[»] chr2 (3 HSPs)
chr2 (671-764)||(37037942-37038035)
chr2 (1028-1070)||(7168968-7169010)
chr2 (797-831)||(37038074-37038108)
[»] scaffold0003 (1 HSPs)
scaffold0003 (671-849)||(342217-342404)
[»] scaffold1004 (1 HSPs)
scaffold1004 (1193-1238)||(1727-1772)
[»] scaffold0760 (1 HSPs)
scaffold0760 (1193-1238)||(4222-4267)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1193-1247)||(88697-88751)


Alignment Details
Target: chr6 (Bit Score: 411; Significance: 0; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 281 - 849
Target Start/End: Complemental strand, 31152492 - 31151926
Alignment:
Q  281 atgggttccagccatagtaaggcactatgagaaatgttgaaatttcttctcctacatgcctatagaaagtagcttgtggtgcttaacttcaatttgtgtc 380  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31152492 atgggttccagctatagtaaggcactatgagagatgttgaaatttcttctcctacatgcctatagaaagtagcttgcggtgcttaacttcaatttgtgtc 31152393  T
Q  381 agaagcaatttgaaagcatggcaaatgatagtacaaaagtcaaggacggtggagtatagtggttgaatgtgagaaccaagcattcaatgcttgtggttca 480  Q
    |||||||||||||||||| |||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31152392 agaagcaatttgaaagcacggcagatggtagttcaaaagtcaaggacggttgagtatagtggttgaatgtgagaaccaagcattcaatgtttgtggttca 31152293  T
Q  481 aatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacatagagttgagagaaaaatagagagttcctcata 580  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| ||  | || ||     |||||||||||||||||||||||||||| ||    
T  31152292 aatctctctataaatagagaagagcttcagcaaagca-atcacaccacaacacaa--cacaatcctcgggagttgagagaaaaatagagagttcctcgta 31152196  T
Q  581 agagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttaggtccacctgagggtgaagatttgtattccc 680  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  31152195 agagtgtgagagaaaaatatagtaagccaatttgtgagagttgtatctataaatttagatacgtagttaggtccatctgagggtgaagatttgtattccc 31152096  T
Q  681 attattattatagtggagatttaagaggcttacgggtcccgtggt-ttttccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtca 779  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  31152095 attattattatagtggagatttaagaggcctacggatcccgtggtttttttcttactcacattgagaaggttttccacattaaaattttgttgtgtgtca 31151996  T
Q  780 ttttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  31151995 ttttatgtttccgctaaagtgcctattttgagttcagagaggagggaaattatgcaggcatttcccaaca 31151926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22982043 - 22981841
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    ||||||||||| || ||||| ||||| ||||| ||||||||||| ||||||||||| || || || |||||||| || |||||||| || || ||   ||    
T  22982043 gttctctattgcgacagtcagagtgcgattcatctcagcaagaactcgacataccactctagatcgaaacacattgacgtgaggtaccactgtattaatg 22981944  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaagagaagatagagtt 200  Q
    ||||||| |||| |||| || || || |||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| ||||||| ||||| |||||    
T  22981943 atgtgttggagagtaaattgttgaaagtagagaaagttcacaccaatgagaatggagcagacatgatgacaaaacctctaccaaaagaaaagattgagtt 22981844  T
Q  201 ttg 203  Q
    |||    
T  22981843 ttg 22981841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23806365 - 23806567
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    ||||||||||| || ||||| ||||| ||||| ||||||||||| ||||||||||| || || || |||||||| || |||||||| || || ||   ||    
T  23806365 gttctctattgcgacagtcagagtgcgattcatctcagcaagaactcgacataccactctagatcgaaacacattgacgtgaggtaccactgtattaatg 23806464  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaagagaagatagagtt 200  Q
    ||||||| |||| |||| || || || |||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| ||||||| ||||| |||||    
T  23806465 atgtgttggagagtaaattgttgaaagtagagaaagttcacaccaatgagaatggagcagacatgatgacaaaacctctaccaaaagaaaagattgagtt 23806564  T
Q  201 ttg 203  Q
    |||    
T  23806565 ttg 23806567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1132 - 1235
Target Start/End: Original strand, 4183395 - 4183498
Alignment:
Q  1132 agtgaaacgatcataaactaaggtgaatgaggattgtaaataattttggtctggatttattaaaggaggcaatatcttgaattttctaatggaagggtta 1231  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| ||||||  ||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  4183395 agtgaaacgatcatagactaaggtaaatgaggtttgtaaatatttttggcttggatttatcaaaggaggcaatatcttgaatttacgaatggaagggtta 4183494  T
Q  1232 caca 1235  Q
    ||||    
T  4183495 caca 4183498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1132 - 1235
Target Start/End: Original strand, 4744236 - 4744339
Alignment:
Q  1132 agtgaaacgatcataaactaaggtgaatgaggattgtaaataattttggtctggatttattaaaggaggcaatatcttgaattttctaatggaagggtta 1231  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| ||||||  ||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  4744236 agtgaaacgatcatagactaaggtaaatgaggtttgtaaatatttttggcttggatttatcaaaggaggcaatatcttgaatttacgaatggaagggtta 4744335  T
Q  1232 caca 1235  Q
    ||||    
T  4744336 caca 4744339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 652 - 849
Target Start/End: Original strand, 22981504 - 22981710
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 748  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||||||  | |||||||||||||||||| || ||||||||||||||    
T  22981504 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggtttttccctttctcacattgagaag 22981603  T
Q  749 gttttccacgctaaaattttgttgtgt-------gtcatttt--acgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggca 839  Q
    |||||||||||||||||| |  |||||        | |||||  |||||||||||  ||||||| ||||||||||||||||| ||||||||| |||| ||    
T  22981604 gttttccacgctaaaattct-ctgtgtcattacgcttatttttcacgtttccgct--agtgcctgttttgagttcacggaggggggaaattatgcagtca 22981700  T
Q  840 tttcccaaca 849  Q
    ||||||||||    
T  22981701 tttcccaaca 22981710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 652 - 849
Target Start/End: Complemental strand, 23806904 - 23806698
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 748  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||||||  | |||||||||||||||||| || ||||||||||||||    
T  23806904 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggtttttccctttctcacattgagaag 23806805  T
Q  749 gttttccacgctaaaattttgttgtgt-------gtcatttt--acgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggca 839  Q
    |||||||||||||||||| |  |||||        | |||||  |||||||||||  ||||||| ||||||||||||||||| ||||||||| |||| ||    
T  23806804 gttttccacgctaaaattct-ctgtgtcattacgcttatttttcacgtttccgct--agtgcctgttttgagttcacggaggggggaaattatgcagtca 23806708  T
Q  840 tttcccaaca 849  Q
    ||||||||||    
T  23806707 tttcccaaca 23806698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 590 - 773
Target Start/End: Complemental strand, 1111564 - 1111378
Alignment:
Q  590 gagaaaaatatagtgagccaatttgtgagagttgtatcta--caaattgagatacatagttaggtccacctgagggtgaagatttgtattcccattatta 687  Q
    ||||||||||||  || |||||||||||||  | ||||||  |||||||||||||||||||||||  || | ||||||||  ||||||||| ||||||||    
T  1111564 gagaaaaatataaggaaccaatttgtgagaaatatatctatacaaattgagatacatagttaggtttacgtaagggtgaaagtttgtattctcattatta 1111465  T
Q  688 ttatagtgg-agatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaattttgttgt 773  Q
    ||||  | | ||||||||||| |||| | ||||| || |||||||||| | ||||| ||||||||||| || |||||||||||||||    
T  1111464 ttattatagtagatttaagagacttatgagtcccatgatttttccttatttacattcagaaggttttctacactaaaattttgttgt 1111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 1105201 - 1105112
Alignment:
Q  49 acataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaatt 138  Q
    |||||||||| ||| |||||||||||| |||| ||  ||||||| |||| ||| ||||||||||||||||||||  ||||||||||||||    
T  1105201 acataccatttaagatcaaaacacatcaatgtaagaaatcattgaatacatgacgtgttagagaataaactgctttaaatagagaaaatt 1105112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1047 - 1079
Target Start/End: Original strand, 4183304 - 4183336
Alignment:
Q  1047 tccaataatcggtacccaaagtatgaacattaa 1079  Q
    |||||||||||||||||||||||||||||||||    
T  4183304 tccaataatcggtacccaaagtatgaacattaa 4183336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1047 - 1079
Target Start/End: Original strand, 4744148 - 4744180
Alignment:
Q  1047 tccaataatcggtacccaaagtatgaacattaa 1079  Q
    |||||||||||||||||||||||||||||||||    
T  4744148 tccaataatcggtacccaaagtatgaacattaa 4744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Original strand, 9820341 - 9820386
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||    
T  9820341 aaaggaggcaatatgttatattttctaatggaagggttccacaaaa 9820386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Original strand, 24417914 - 24417959
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    ||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  24417914 aaaggaggcaagatcttgaatgttctaatcgaagggttccacaaaa 24417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 384; Significance: 0; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 850 - 1249
Target Start/End: Complemental strand, 51858554 - 51858155
Alignment:
Q  850 caaggcaatgcaagttccaggtttgtaattataaagagggtgaaaaagctcttgacacaactcattctccaaatcaagagaaacaataaccctcgcaaaa 949  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51858554 caaggcaatgcaagttccaggtttgtaattataaagagggtgaaaaagctcttgacacaactcattctccaaatcaagagaaacaatgaccctcgcaaaa 51858455  T
Q  950 ctacgatcatgatataccaaccaattaacagtgtcactcaaagatattcccggattttgaacgaggtaataatgctttggaaagtcctgaatctttctcc 1049  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51858454 ctacgatcatgatataccaaccaattaacagtgtcactcaaagatattcccggattttgaacgaggtaataatgctttggaaagtcctgaatctttctcc 51858355  T
Q  1050 aataatcggtacccaaagtatgaacattaacttgtttatatccgtcagtggtctttgaaagagaataaatgttatagttattagtgaaacgatcataaac 1149  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51858354 aataatcggtacccaaagtatgaacattaacctgtttatatccgtcagtggtctttgaaagagaataaatcttatagttattagtgaaacgatcataaac 51858255  T
Q  1150 taaggtgaatgaggattgtaaataattttggtctggatttattaaaggaggcaatatcttgaattttctaatggaagggttacacaaaagagaagaagat 1249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51858254 taaggtgaatgaggattgtaaataattttggtctggatttattaaaggaggcaatatcttgaattttctaatggaagggttacacaaaagagcagaagat 51858155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 634 - 849
Target Start/End: Complemental strand, 29707069 - 29706854
Alignment:
Q  634 ttgagatacatagttaggtccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttcctt 733  Q
    |||||||||||||||||||||||| |||||||||||||| |  | ||||||||||||||||||||||||||||||  || | |||||||| || ||||||    
T  29707069 ttgagatacatagttaggtccacccgagggtgaagattttttattccattattattatagtggagatttaagaggtctatgagtcccgtgattgttcctt 29706970  T
Q  734 actcacattgagaaggttttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaag 833  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||  |||||||||| |||||| |||||||||| ||| ||||||| |    
T  29706969 actcatattgagaaggttttcctcactaaaattttgttgtgtgtcattttacatttttgctaaagtgcatattttaagttcacggatgagagaaattatg 29706870  T
Q  834 caggcatttcccaaca 849  Q
     |||||||| ||||||    
T  29706869 gaggcattttccaaca 29706854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 864 - 1079
Target Start/End: Original strand, 51763047 - 51763261
Alignment:
Q  864 ttccaggtttgtaattataaagagggtgaaaaagctcttgacacaactcattctccaaatcaagagaaacaataaccctcgcaaaactacgatcatgata 963  Q
    ||||||||| ||||| |||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |  ||||| | |||||  | |    
T  51763047 ttccaggttggtaatcataatgagggtgagaaagctcttgatacaactcattctccaaaccaagagaaacaataacccaccaaaaaccatgatcactaaa 51763146  T
Q  964 taccaaccaattaacagtgtcactcaaagatattcccggattttgaacgaggtaataatgctttggaaagtcctgaatctttctccaataatcggtaccc 1063  Q
    || ||||||||||||||||||||||| | ||||||||     |||| |||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  51763147 taacaaccaattaacagtgtcactcacaaatattccctttgcttgagcgaggagataatgctttggaaagtcctggatctttctccaataatcggtaccc 51763246  T
Q  1064 aaagtatgaacattaa 1079  Q
    |||||| |||||||||    
T  51763247 aaagta-gaacattaa 51763261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 850 - 1082
Target Start/End: Complemental strand, 51854895 - 51854665
Alignment:
Q  850 caaggcaatgcaagttccaggtttgtaattataaagagggtgaaaaagctcttgacacaactcattctccaaatcaagagaaacaataaccctcgcaaaa 949  Q
    ||||| ||||| | || |||||| ||| | ||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||| |||||| |||||    
T  51854895 caaggtaatgcgatttgcaggttcgtagtcataaagagggtgagaaaactcttgatacaacccattctccaaatcaagagaaacaatgaccctctcaaaa 51854796  T
Q  950 -ctacgatcatgatataccaaccaattaacagtgtcactcaaagatattcccggattttgaacgaggtaataatgctttggaaagtcctgaatctttctc 1048  Q
     ||| |||||| |||||||||||||||||| ||||| | || | ||||||||||  |||||| |   ||| ||| | ||||||||||||| |||||||||    
T  51854795 actaggatcatcatataccaaccaattaaccgtgtcgcacacaaatattcccggtctttgaatg---taacaatcccttggaaagtcctggatctttctc 51854699  T
Q  1049 caataatcggtacccaaagtatgaacattaactt 1082  Q
    |||||||||||||||||||||||| |||||||||    
T  51854698 caataatcggtacccaaagtatgagcattaactt 51854665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 882 - 1081
Target Start/End: Original strand, 51756885 - 51757081
Alignment:
Q  882 aaagagggtgaaaaagctcttgacacaactcattctccaaatcaagagaaacaataaccctcgcaaaactacgatcatgatataccaaccaattaacagt 981  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||| || || |  || |||  ||||||   || || | ||||||||||| |||     
T  51756885 aaagagggtgcaaaagctcttgagacaactccttctccaaatcaagagatactatgatacttgcattactacgccgatcatgtgccaaccaattagcagc 51756984  T
Q  982 gtcactcaaagatattcccggattttgaacgaggtaataatgctttggaaagtcctgaatctttctccaataatcggtacccaaagtatgaacattaact 1081  Q
    |||||||| | ||||||| ||  || ||||| |||||| ||   |||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  51756985 gtcactcacaaatattccaggtcttggaacggggtaatgat---ttgggaagtcctggatccttctccaataatcggtacccaaagtatgaacgttaact 51757081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1117 - 1239
Target Start/End: Original strand, 51763298 - 51763417
Alignment:
Q  1117 aatgttatagttattagtgaaacgatcataaactaaggtgaatgaggattgtaaataattttggtctggatttattaaaggaggcaatatcttgaatttt 1216  Q
    ||||||||| |||||||||||| ||| ||| |||| ||||||  ||| ||| |||||||||||| |||||||||| |   |||||||||||||||||||     
T  51763298 aatgttataattattagtgaaaagatgatagactagggtgaacaaggtttgaaaataattttgggctggatttatga---gaggcaatatcttgaatttc 51763394  T
Q  1217 ctaatggaagggttacacaaaag 1239  Q
    ||||||||||||||||| |||||    
T  51763395 ctaatggaagggttacataaaag 51763417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1040 - 1082
Target Start/End: Original strand, 51221494 - 51221536
Alignment:
Q  1040 atctttctccaataatcggtacccaaagtatgaacattaactt 1082  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51221494 atctttctccaataatcggtacccaaagtatgaacattaactt 51221536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1121 - 1241
Target Start/End: Complemental strand, 51829416 - 51829299
Alignment:
Q  1121 ttatagttattagtgaaacgatcataaactaaggtgaatgaggattgtaaataattttggtctggatttattaaaggaggcaatatcttgaattttctaa 1220  Q
    ||||| |||| ||||||||||||||| |||||||| ||   || | ||| ||||||||  |||||| || | ||||||||||||||||| |||||||| |    
T  51829416 ttataattatgagtgaaacgatcatacactaaggtaaa---ggttggtatataatttttctctggagttgtcaaaggaggcaatatcttaaattttctga 51829320  T
Q  1221 tggaagggttacacaaaagag 1241  Q
    |||||||||| ||||| ||||    
T  51829319 tggaagggttgcacaagagag 51829299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 914 - 1003
Target Start/End: Original strand, 51221368 - 51221457
Alignment:
Q  914 ttctccaaatcaagagaaacaataaccctcgcaaaactacgatcatgatataccaaccaattaacagtgtcactcaaagatattcccgga 1003  Q
    |||| |||||||||||||||||||||| | | | |||||| || || ||||| |||||| ||||| |||||||||| | |||||||||||    
T  51221368 ttcttcaaatcaagagaaacaataaccattgaataactacaattatcatataacaaccagttaaccgtgtcactcacaaatattcccgga 51221457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1192 - 1241
Target Start/End: Original strand, 51381897 - 51381946
Alignment:
Q  1192 taaaggaggcaatatcttgaattttctaatggaagggttacacaaaagag 1241  Q
    |||||||||||||||||| |||||||||||||||||||| || |||||||    
T  51381897 taaaggaggcaatatcttaaattttctaatggaagggttgcataaaagag 51381946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 674 - 766
Target Start/End: Original strand, 27642132 - 27642225
Alignment:
Q  674 tattcccattattattatagtggagatttaagaggcttacgggtcccgtggttttt-ccttactcacattgagaaggttttccacgctaaaatt 766  Q
    ||||||||||||||||||||||||  |||||||| |    ||  |||||| ||||| |||| ||||||||||||||||||| ||||| ||||||    
T  27642132 tattcccattattattatagtggaagtttaagagacccgaggaccccgtgattttttcctttctcacattgagaaggttttacacgccaaaatt 27642225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1193 - 1241
Target Start/End: Complemental strand, 51831990 - 51831942
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaagag 1241  Q
    |||||||||| ||||||  ||||||| ||||||||||||||||||||||    
T  51831990 aaaggaggcattatcttatattttctgatggaagggttacacaaaagag 51831942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1121 - 1159
Target Start/End: Complemental strand, 51854626 - 51854588
Alignment:
Q  1121 ttatagttattagtgaaacgatcataaactaaggtgaat 1159  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  51854626 ttataattattggtgaaacgatcataaactaaggtgaat 51854588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1033 - 1082
Target Start/End: Original strand, 51381738 - 51381787
Alignment:
Q  1033 gtcctgaatctttctccaataatcggtacccaaagtatgaacattaactt 1082  Q
    |||||||||| || |||||||||| |||||||||||||||  ||||||||    
T  51381738 gtcctgaatccttttccaataatcagtacccaaagtatgagtattaactt 51381787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 452 - 849
Target Start/End: Original strand, 33807820 - 33808213
Alignment:
Q  452 agaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacataga 551  Q
    ||||||||||||| |||||    |||||||| | ||||||||||||||||||| |||||||| | |   |||||||||||| ||||||||||||||||||    
T  33807820 agaaccaagcatttaatgcacacggttcaaaaccctctataaatagagaagagtttcagcaatgaaa--cacaccacaacacaatcctcactcacataga 33807917  T
Q  552 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 651  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807918 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 33808017  T
Q  652 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 751  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33808018 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggtcccgtggtttttccttactcacattgagaaggtt 33808117  T
Q  752 ttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33808118 ttccacgctaaaattttgt--tgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 33808213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 452 - 849
Target Start/End: Original strand, 33811474 - 33811867
Alignment:
Q  452 agaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacataga 551  Q
    ||||||||||||| |||||    |||||||| | ||||||||||||||||||| |||||||| | |   |||||||||||| ||||||||||||||||||    
T  33811474 agaaccaagcatttaatgcacacggttcaaaaccctctataaatagagaagagtttcagcaatgaaa--cacaccacaacacaatcctcactcacataga 33811571  T
Q  552 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 651  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33811572 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 33811671  T
Q  652 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 751  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33811672 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggtcccgtggtttttccttactcacattgagaaggtt 33811771  T
Q  752 ttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33811772 ttccacgctaaaattttgt--tgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 33811867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 452 - 849
Target Start/End: Original strand, 33816392 - 33816785
Alignment:
Q  452 agaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacataga 551  Q
    ||||||||||||| |||||    |||||||| | ||||||||||||||||||| |||||||| | |   |||||||||||| ||||||||||||||||||    
T  33816392 agaaccaagcatttaatgcacacggttcaaaaccctctataaatagagaagagtttcagcaatgaaa--cacaccacaacacaatcctcactcacataga 33816489  T
Q  552 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 651  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33816490 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 33816589  T
Q  652 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 751  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33816590 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggtcccgtggtttttccttactcacattgagaaggtt 33816689  T
Q  752 ttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33816690 ttccacgctaaaattttgt--tgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 33816785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 33811015 - 33811307
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33811015 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggattcgtg 33811114  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaagagaagatagagtt 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  33811115 atgtgttggagaataaactgctgcaaatagagaaaattcacaccaatgacaacggagcagatatgatgacaaaagctctaccaaaagagaagatagagtt 33811214  T
Q  201 ttgtaaagaggctgcaggcatagcagcaaccccaaactaatctaaggatagtttcctctttggctggagggggagaattgatgggttccagcca 294  Q
    ||||||| | ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  33811215 ttgtaaacaagctgcaggcttggcagcaaccccaaactaatctaaggatagtttcc-ctttggctggagggggagaattgttggtttccagcca 33811307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 33815933 - 33816225
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33815933 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggattcgtg 33816032  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaagagaagatagagtt 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  33816033 atgtgttggagaataaactgctgcaaatagagaaaattcacaccaatgacaacggagcagatatgatgacaaaagctctaccaaaagagaagatagagtt 33816132  T
Q  201 ttgtaaagaggctgcaggcatagcagcaaccccaaactaatctaaggatagtttcctctttggctggagggggagaattgatgggttccagcca 294  Q
    ||||||| | ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  33816133 ttgtaaacaagctgcaggcttggcagcaaccccaaactaatctaaggatagtttcc-ctttggctggagggggagaattgttggtttccagcca 33816225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 766
Target Start/End: Original strand, 16698504 - 16698601
Alignment:
Q  671 ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaatt 766  Q
    ||||||||||||||| ||||||||||| | |||||||||   | ||||||| |  ||||||| || ||||||||||||||| ||||||| ||||||||    
T  16698504 ttgtattcccattatcattatagtggaagttttaagaggtccaagggtcccataatttttccctttctcacattgagaaggatttccacactaaaatt 16698601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 20292603 - 20292558
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||    
T  20292603 aaaggaggcactctcttgaattttctaatggaagggttccacaaaa 20292558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 20301051 - 20301006
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||    
T  20301051 aaaggaggcactctcttgaattttctaatggaagggttccacaaaa 20301006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 20305464 - 20305419
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||    
T  20305464 aaaggaggcactctcttgaattttctaatggaagggttccacaaaa 20305419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 20309868 - 20309823
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||    
T  20309868 aaaggaggcactctcttgaattttctaatggaagggttccacaaaa 20309823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 766
Target Start/End: Complemental strand, 22764002 - 22763905
Alignment:
Q  671 ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaatt 766  Q
    ||||||||||||||| |||||||   | | ||||||||||  |  ||||||||||||||||| || |||| ||||||||||||||||| |||||||||    
T  22764002 ttgtattcccattatcattatagcataagttttaagaggcccaatggtcccgtggtttttccctttctcatattgagaaggttttccatgctaaaatt 22763905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 264; Significance: 1e-146; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-146
Query Start/End: Original strand, 443 - 849
Target Start/End: Original strand, 50602993 - 50603403
Alignment:
Q  443 ttgaatgtgagaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacata-----atc 537  Q
    ||||| ||| |||||||||||| |||||||  ||||||  ||||||||||||||||||||||||||||||||||| || |||||||||||||     |||    
T  50602993 ttgaaagtgtgaaccaagcatttaatgcttacggttcatttctctctataaatagagaagagcttcagcaaagcaaac-acaccacaacatagcacaatc 50603091  T
Q  538 ctcactcacatagagttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgt--gagagttgtatctacaaatt 635  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  50603092 ctcactcacacagagttgagagaaaaatagaaagttcctcataagagtg--agagaaaaatatagtgagccaatttgtatgagagttgtatctacaaatt 50603189  T
Q  636 gagatacatagttaggtccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttac 735  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  50603190 gagatatatagttaggtccatctaaaggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggttccgtggttttttcttac 50603289  T
Q  736 tcacattgagaaggttttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagca 835  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||   |     
T  50603290 tcacattgagaaggttttccacgctaaaattttattgtgtgtcattttacgttttcgctaaagtgtctattttgagttcacggaggagagaaattgtact 50603389  T
Q  836 ggcatttcccaaca 849  Q
    ||||||||||||||    
T  50603390 ggcatttcccaaca 50603403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 54968114 - 54967873
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    ||||||||||| || ||||| || |||||||| ||||||||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| ||||    
T  54968114 gttctctattgcgacagtcagagcgcaattcatctcagcaagaactcaacataccactccagatcaaaacacattgatgtgaggtatcactggattcgtg 54968015  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaagagaagatagagtt 200  Q
    ||||||| || | |||| || || || |||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  54968014 atgtgttggaaagtaaattgttgaaagtagagaaagttcacaccaatgagaacggagcagatatgatgacaaaagctctaccaaaagagaagatagagtt 54967915  T
Q  201 ttgtaaagaggctgcaggcatagcagcaaccccaaactaatc 242  Q
    ||| ||| | ||||| ||  | |||||||||||||| |||||    
T  54967914 ttgcaaacaagctgctggattggcagcaaccccaaattaatc 54967873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 599 - 849
Target Start/End: Complemental strand, 54967477 - 54967210
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 692  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  54967477 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattata 54967378  T
Q  693 gtggagattt--aagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaattttgttgtgtgtc----------- 778  Q
    |||||  |||  |||||||  | |||||||||||||||||| || |||| ||||||||||||||||||||||||||| | || ||||||               
T  54967377 gtggaagtttttaagaggcccaagggtcccgtggtttttccctttctcatattgagaaggttttccacgctaaaattctctt-tgtgtcattacgctttt 54967279  T
Q  779 attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    |||| |||||||||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  54967278 atttcacgtttccgct--agtgcctattttgagttgacggaggagggaaattatgcaggcatttcccaaca 54967210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 652 - 849
Target Start/End: Complemental strand, 44782733 - 44782524
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaa 747  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | |||||||||   | ||||||||||||||||  |||| |||| ||||||||    
T  44782733 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggtccaagggtcccgtggttttttccctttctcatattgagaa 44782634  T
Q  748 ggttttccacgctaaaattttgttgtgtgtc-----------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 836  Q
    ||||||||||||||||||| | || ||||||           |||| |||||||||||  |||| |||||||||||||||||||||||||||||| ||||    
T  44782633 ggttttccacgctaaaattctctt-tgtgtcattacgtttatatttcacgtttccgct--agtgtctattttgagttcacggaggagggaaattatgcag 44782537  T
Q  837 gcatttcccaaca 849  Q
    |||||||||||||    
T  44782536 gcatttcccaaca 44782524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 599 - 766
Target Start/End: Original strand, 39298736 - 39298908
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 692  Q
    ||||||||||||||||||||||| ||   |||||||||||| | |||     ||||| ||||||| ||||||||| | |||||||||| |||| ||||||    
T  39298736 atagtgagccaatttgtgagagt-gtccttacaaattgagagatatattgtagttagatccacctaagggtgaagttgttgtattccctttatcattata 39298834  T
Q  693 gtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaatt 766  Q
    |||||  ||||||||||  | |||||||||| |||||||||  |||||||||||||||||| ||| ||||||||    
T  39298835 gtggaagtttaagaggcacaagggtcccgtgatttttccttcatcacattgagaaggtttttcacactaaaatt 39298908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 652 - 768
Target Start/End: Complemental strand, 18556511 - 18556392
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaag 748  Q
    ||||||| ||||||||| | |||||||| |||| | |||||||||||  |||||||||||   ||||||||||||||||  |||| |||| |||||||||    
T  18556511 tccacctaagggtgaagttgttgtattctcattgtcattatagtggaagtttaagaggctcgagggtcccgtggttttttgcctttctcagattgagaag 18556412  T
Q  749 gttttccacgctaaaatttt 768  Q
    ||||||||||||||||||||    
T  18556411 gttttccacgctaaaatttt 18556392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 593 - 697
Target Start/End: Complemental strand, 31725448 - 31725346
Alignment:
Q  593 aaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttaggtccacctgagggtgaagatttgtattcccattattattata 692  Q
    ||||||||||| |  |||||||||||| ||||  |||||||||||||||||| || |||||||||| || |||||||||||||||| ||||||| |||||    
T  31725448 aaaaatatagttaatcaatttgtgagaattgt--ctacaaattgagatacatcgtaaggtccacctaagtgtgaagatttgtattctcattattgttata 31725351  T
Q  693 gtgga 697  Q
     ||||    
T  31725350 ttgga 31725346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 652 - 837
Target Start/End: Complemental strand, 54980051 - 54979854
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtggagattt--aagaggcttacgggtcccgtggtttttcc-ttactcacattgagaa 747  Q
    ||||||| ||||||||| | ||||||||||||||| |||||||||||  |||  |||||||  | |||||||||||||||||| || |||| ||||||||    
T  54980051 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagtttttaagaggcccaagggtcccgtggtttttccctttctcatattgagaa 54979952  T
Q  748 ggttttccacgctaaaattttgttgtgtgtc-----------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 836  Q
    ||||||||| ||||||||| | || ||||||           |||| |||||||||||  ||||| ||||||||||| ||||||||||||||||| ||||    
T  54979951 ggttttccatgctaaaattctctt-tgtgtcattacacttttatttcacgtttccgct--agtgcttattttgagttgacggaggagggaaattatgcag 54979855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1196 - 1238
Target Start/End: Complemental strand, 13497829 - 13497787
Alignment:
Q  1196 ggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  13497829 ggaggcaatatcttgaattttctaatggaagggttccacaaaa 13497787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 671 - 770
Target Start/End: Original strand, 17645800 - 17645897
Alignment:
Q  671 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaattttgt 770  Q
    |||||||  |||||| |||||||||||  ||||||| ||| | | ||||||||||||||  ||  | | |||||||||||||||||||||||||||||||    
T  17645800 ttgtattgtcattatcattatagtggaagtttaagacgctcaagagtcccgtggttttttttt--ttatattgagaaggttttccacgctaaaattttgt 17645897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Original strand, 771957 - 772002
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||    
T  771957 aaaggaggcaatatcttgaatttttgaatggaagggttccacaaaa 772002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 2455466 - 2455421
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    |||||||||||||||||||||| || |||||||||||| |||||||    
T  2455466 aaaggaggcaatatcttgaattctccaatggaagggttccacaaaa 2455421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Original strand, 9595052 - 9595097
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  9595052 aaaggaggcaataacttaaattttctaatggaagggttccacaaaa 9595097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1031 - 1082
Target Start/End: Complemental strand, 43997332 - 43997281
Alignment:
Q  1031 aagtcctgaatctttctccaataatcggtacccaaagtatgaacattaactt 1082  Q
    |||||||| ||| | ||||||||||  |||||||||||||||||||||||||    
T  43997332 aagtcctggatcctcctccaataattagtacccaaagtatgaacattaactt 43997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1193 - 1239
Target Start/End: Complemental strand, 13526213 - 13526167
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaag 1239  Q
    |||||||| || || ||||||||||||||||||||||| ||||||||    
T  13526213 aaaggaggaaacatattgaattttctaatggaagggttccacaaaag 13526167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 2474746 - 2474701
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    ||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  2474746 aaaggaggcaataacttaaattttccaatggaagggttccacaaaa 2474701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1183 - 1236
Target Start/End: Complemental strand, 2476288 - 2476235
Alignment:
Q  1183 tggatttattaaaggaggcaatatcttgaattttctaatggaagggttacacaa 1236  Q
    ||||||| | ||||||||||||| ||  |||||||||||||||||||| |||||    
T  2476288 tggatttttcaaaggaggcaatagctgaaattttctaatggaagggttccacaa 2476235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1193 - 1230
Target Start/End: Original strand, 9562386 - 9562423
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggtt 1230  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  9562386 aaaggaggcaataacttaaattttctaatggaagggtt 9562423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 797 - 849
Target Start/End: Original strand, 17645928 - 17645981
Alignment:
Q  797 agtgcctattttgagttcacggaggagggaaattaagcagg-catttcccaaca 849  Q
    |||| |||||||||||||||||| ||||||||||| | ||| ||||||||||||    
T  17645928 agtgtctattttgagttcacggatgagggaaattatggaggtcatttcccaaca 17645981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Original strand, 23231419 - 23231464
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    |||| ||||||||| ||| ||||||||||||||||||| |||||||    
T  23231419 aaagaaggcaatattttggattttctaatggaagggttccacaaaa 23231464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1198 - 1239
Target Start/End: Original strand, 23239959 - 23240000
Alignment:
Q  1198 aggcaatatcttgaattttctaatggaagggttacacaaaag 1239  Q
    ||||||||| |||||||||||||||||||| ||| |||||||    
T  23239959 aggcaatattttgaattttctaatggaaggattaaacaaaag 23240000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4836448 - 4836159
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4836448 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 4836349  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaagagaagatagagtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| | ||| | |||||||||||||||||    
T  4836348 atgtgttagagaataaactgctgcaaatagagaaaattcacacaaatgagaatggagcagacatgatgacaaaaccgctaccgaaagagaagatagagtt 4836249  T
Q  201 ttgtaaagaggctgcaggcatagcagcaaccccaaactaatctaaggatagtttcctctttggctggagggggagaattgatgggttccagccat 295  Q
    ||| ||| | ||||| || || | ||||||||||||||||| |||||     |||| || |||||||||||||||||||| |||| |||||||||    
T  4836248 ttgcaaacaagctgctggaatggtagcaaccccaaactaat-taagg---cattcccctatggctggagggggagaattg-tggggtccagccat 4836159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 24380105 - 24379927
Alignment:
Q  64 tcaaaacacatcgatgtgaggtatcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagata 163  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||| |||| |||| || || || |||||||| ||||||||||| | |||||||| || |    
T  24380105 tcaaaacacaatgatgtgaggtatcactggattcgtgatgtgttggagagtaaattgttgaaagtagagaaagttcacaccaataagaatggagccgaca 24380006  T
Q  164 tgatgacaaaagctctatcaaaagagaagatagagttttgtaaagaggctgcaggcatagcagcaaccccaaactaatc 242  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| | ||||| ||  | ||||||||||||||||||||    
T  24380005 tgatgacaaaacctctatcaaaagagaagatagagttttgcaaacaagctgctggattggcagcaaccccaaactaatc 24379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 652 - 849
Target Start/End: Complemental strand, 4842857 - 4842648
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaa 747  Q
    ||||||| ||||||||| | ||||||||| ||||| ||||||||||| | ||||||||||  | |||||| |||||||||  |||| |||||||||||||    
T  4842857 tccacctaagggtgaagttgttgtattcctattatcattatagtggaagttttaagaggcccaagggtcctgtggttttttccctttctcacattgagaa 4842758  T
Q  748 ggttttccacgctaaaattttgttgtgtgtcatt-----------ttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 836  Q
    ||||||||||||||||||| | || |||||||||           | ||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  4842757 ggttttccacgctaaaattctctt-tgtgtcattacacttatatttcacgtttccgcta--gtgcctattttgagttcacggaggagggaaattatgcag 4842661  T
Q  837 gcatttcccaaca 849  Q
    |||||||||||||    
T  4842660 gcatttcccaaca 4842648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 599 - 852
Target Start/End: Complemental strand, 4835840 - 4835572
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 692  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||| ||||||||||| ||||||    
T  4835840 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgcattcccattatcattata 4835741  T
Q  693 gtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggttttccacgctaaaattttgt-tgt------gtgt-catt 781  Q
    ||||| | ||||||||||  | ||||||||||||||||  |||| |||||||||||||||||||||||||||||||| | | |||      || |  |||    
T  4835740 gtggaagttttaagaggcccaagggtcccgtggttttttccctttctcacattgagaaggttttccacgctaaaattctctgtgtcattacgtttatatt 4835641  T
Q  782 ttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaacacaa 852  Q
    | |||||||| ||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4835640 tcacgtttccact--agtgcctattttgagttcatggaggagggaaattatgcaggcatttcccaacacaa 4835572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 599 - 849
Target Start/End: Complemental strand, 25857395 - 25857131
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaatt--gagatacat---agttaggtccacctgagggtgaagat-ttgtattcccattattattata 692  Q
    |||||||||||||||||||||||  |   ||||||||  |||||| ||   ||| || ||||||| | ||||||| | ||||||||||||||| ||||||    
T  25857395 atagtgagccaatttgtgagagtgttccttacaaattaagagatatattgtagtgagatccacctaaaggtgaagttgttgtattcccattatcattata 25857296  T
Q  693 gtgga-gatttaagaggcttacgggtcccgtggtttttcctta-ctcacattgagaaggttttccacgctaaaattttgttgtgtgtc-----------a 779  Q
    ||||| | ||||||||||  | ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    | ||||||           |    
T  25857295 gtggaagttttaagaggcccaagggtcccgtggtttttccttttctcacattgagaaggttttccacgctaaaatt---ctctgtgtcattacgcttata 25857199  T
Q  780 ttttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    ||| |||||||||||  |||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  25857198 tttcacgtttccgct--agtgcctattttaagttcacggaggagggaaattatgcaggcatttcccaaca 25857131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 652 - 768
Target Start/End: Complemental strand, 13465165 - 13465046
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 748  Q
    ||||||||||||||||  | ||||||||||||||| ||||||||||| | ||||||||||  | |||||| ||||||||||| || ||||||||||||||    
T  13465165 tccacctgagggtgaacttgttgtattcccattatcattatagtggatgttttaagaggcccaagggtcctgtggtttttccctttctcacattgagaag 13465066  T
Q  749 gttttccacgctaaaatttt 768  Q
    ||||||||||||||||||||    
T  13465065 gttttccacgctaaaatttt 13465046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 589 - 758
Target Start/End: Complemental strand, 8252853 - 8252686
Alignment:
Q  589 agagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagataca----tagttaggtccacctgagggtgaagatttgtattcccatta 684  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||||||    || ||| ||||| || | | ||||| ||||||||||| |||    
T  8252853 agagaaaaatatagtgagtcaatttatgatagttgtatctacaaattgagatacataattaattaagtccatctaaagatgaagctttgtattcccgtta 8252754  T
Q  685 ttattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacg 758  Q
    |||||| | ||  || ||||||| |||||| ||||||      | |||||||||| ||||||||||||||||||    
T  8252753 ttattacattgaggagttaagagacttacgagtcccg------taccttactcacgttgagaaggttttccacg 8252686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 671 - 766
Target Start/End: Complemental strand, 27341120 - 27341025
Alignment:
Q  671 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaatt 766  Q
    ||||||| ||||||| ||| |||| ||  |||||||||   | |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  27341120 ttgtatttccattatcattgtagtagaagtttaagaggtacaagggtcccgtggtttttcctttcttacattgagaaggttttccacgctaaaatt 27341025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 654 - 775
Target Start/End: Original strand, 17845847 - 17845969
Alignment:
Q  654 cacctgagggtgaagat-ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttt 752  Q
    ||||| ||||||||| | ||||||| ||||||| |||||||||||  |||||||||   |  ||||| ||||||||||||| ||||||||| ||||||||    
T  17845847 cacctaagggtgaagttgttgtatttccattatcattatagtggaagtttaagaggtccaaaggtcctgtggtttttccttcctcacattgggaaggttt 17845946  T
Q  753 tccacgctaaaattttgttgtgt 775  Q
    ||||| |||||||| | ||||||    
T  17845947 tccactctaaaattctcttgtgt 17845969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 652 - 766
Target Start/End: Complemental strand, 24379487 - 24379370
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 748  Q
    ||||||| ||||||||| | ||||||||| ||||| ||||||||||| | ||||||||||  |  | ||||||||||||||| || ||||||||||||||    
T  24379487 tccacctaagggtgaagttgttgtattcctattatcattatagtggaagttttaagaggcccaaagatcccgtggtttttccctttctcacattgagaag 24379388  T
Q  749 gttttccacgctaaaatt 766  Q
    |||||||||| |||||||    
T  24379387 gttttccacgttaaaatt 24379370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 799 - 849
Target Start/End: Original strand, 24380113 - 24380163
Alignment:
Q  799 tgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  24380113 tgcctattttgagttcacagaggagggaaattatgcaggcatttcccaaca 24380163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 700 - 766
Target Start/End: Complemental strand, 38994218 - 38994151
Alignment:
Q  700 tttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaatt 766  Q
    |||||||||||   |||||||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  38994218 tttaagaggctcgagggtcccgtggtttttccctttctcgcattgagaaggttttccacgttaaaatt 38994151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 779 - 852
Target Start/End: Complemental strand, 24379347 - 24379276
Alignment:
Q  779 attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaacacaa 852  Q
    ||||||||||||| |||  ||||||||||| |||||||||||||| ||||||| | || ||||| |||||||||    
T  24379347 attttacgtttccacta--gtgcctattttaagttcacggaggagagaaattatgtagacattttccaacacaa 24379276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 102; Significance: 5e-50; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 2033 - 2274
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    ||||||||||| || |||||||| || ||||| ||||||||||| || ||||| || || || |||||||| || |||||||||||||| ||||| ||||    
T  2033 gttctctattgcgacagtcaaagcgcgattcatctcagcaagaactcaacatatcactccagatcaaaacatattgatgtgaggtatcactggattcgtg 2132  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaagagaagatagagtt 200  Q
    ||||||| |||| |||| || || || |||||||| ||||||||||||| ||||||||||| |||||||| ||| ||||| ||||||||||||| |||||    
T  2133 atgtgttggagagtaaattgttgaaagtagagaaagttcacaccaatgagaatggagcagacatgatgaccaaacctctaccaaaagagaagattgagtt 2232  T
Q  201 ttgtaaagaggctgcaggcatagcagcaaccccaaactaatc 242  Q
    ||| ||| | ||||| ||  | ||||||||||||||||||||    
T  2233 ttgcaaacaagctgctggattggcagcaaccccaaactaatc 2274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 652 - 849
Target Start/End: Original strand, 2727 - 2936
Alignment:
Q  652 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaa 747  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||||||  | ||||||||||||||||  |||| |||||||||||||    
T  2727 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggttttttccctttctcacattgagaa 2826  T
Q  748 ggttttccacgctaaaattttgttgtgtgtc-----------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 836  Q
    ||||||||||||||||||| | || ||||||           |||| |||||||||||  |||| ||||||||||||||||||| |||||||||| |||     
T  2827 ggttttccacgctaaaattctctt-tgtgtcattacgcttatatttcacgtttccgct--agtgtctattttgagttcacggagaagggaaattatgcat 2923  T
Q  837 gcatttcccaaca 849  Q
    |||||||||||||    
T  2924 gcatttcccaaca 2936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 84; Significance: 3e-39; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 599 - 831
Target Start/End: Complemental strand, 26752 - 26516
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaattgagataca-----tagttaggtccacctgagggtgaag-atttgtattcccattattattata 692  Q
    |||||||||||||||||||||||  |   |||||||||||| | |     |||| || ||||||| |||||| || | |||||||| | |||| |||| |    
T  26752 atagtgagccaatttgtgagagtgttccttacaaattgagagataaattgtagtgagatccacctaagggtggagtagttgtattctcgttatcattaga 26653  T
Q  693 gtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtcattttacgtttccg 792  Q
    |||||  ||||||||||  | ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||  |||| ||||||||||| ||    
T  26652 gtggaagtttaagaggcccaagggtcccgtagtttttccttactcacattgaaaaggttttccaccctaaaattttgtt--gtgttattttacgttttcg 26555  T
Q  793 ctaaagtgcctattttgagttcacggaggagggaaatta 831  Q
    |||||||| |||||||||||||||| |||||||| ||||    
T  26554 ctaaagtgtctattttgagttcacgaaggagggagatta 26516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 6e-34; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 599 - 849
Target Start/End: Original strand, 41481548 - 41481815
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 692  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  41481548 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattata 41481647  T
Q  693 gtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtc----------- 778  Q
    ||||| | ||||||||||  | ||||||||||||||||  |||| |||| ||||||||||||||||||||||||||| | || ||||||               
T  41481648 gtggaagttttaagaggcccaagggtcccgtggttttttccctttctcatattgagaaggttttccacgctaaaattctctt-tgtgtcattacgtttat 41481746  T
Q  779 attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    |||| |||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  41481747 atttcacgtttccgct--agtgtctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 41481815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 599 - 849
Target Start/End: Original strand, 36167547 - 36167813
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 692  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  36167547 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccacctaagggtgaagttgttgtattcccattatcattata 36167646  T
Q  693 gtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtcatt-------- 781  Q
    ||||| | ||||||||||  | |||||| |||||||||  |||| |||| ||||||||||||||||||||||||||| | || |||||||||            
T  36167647 gtggaagttttaagaggcccaagggtcc-gtggttttttccctttctcatattgagaaggttttccacgctaaaattctctt-tgtgtcattacgtttat 36167744  T
Q  782 ---ttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
       | ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36167745 atttcacgtttccgcta--gtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 36167813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 655 - 844
Target Start/End: Complemental strand, 18951326 - 18951129
Alignment:
Q  655 acctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggt 750  Q
    |||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||| ||  |  |||| ||||||||||  |||| ||||||||||||||||    
T  18951326 acctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaagcccaaaggtctcgtggttttttccctttctcacattgagaaggt 18951227  T
Q  751 tttccacgctaaaattttgttgtgtgtc------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcc 844  Q
    |||||| ||||||||| |||    |  |      |||| | |||||||||  |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  18951226 tttccatgctaaaattctgtgtcattacgcttatatttcatgtttccgct--agtgcctattttgagttcacggaggaggcaaattatgcaggcatttcc 18951129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 2e-30; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 599 - 849
Target Start/End: Complemental strand, 9757480 - 9757212
Alignment:
Q  599 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 692  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  9757480 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccacctaagggtgaagttgttgtattcccattatcattata 9757381  T
Q  693 gtgga---gatttaagaggcttacgggtcccgtggttttt-ccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtc---------- 778  Q
    |||||     ||||||||||  | |||||||||||||||| |||| |||||||||||||||||||||||||||||||| | || ||||||              
T  9757380 gtggaagttttttaagaggcccaagggtcccgtggtttttccctttctcacattgagaaggttttccacgctaaaattctctt-tgtgtcattacgctta 9757282  T
Q  779 -attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
     |||| |||||||||||  |||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  9757281 tatttcacgtttccgct--agtgcctattttgagttcacggaggaaggaaattatgcaggcatttaccaaca 9757212  T

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Target: chr4; HSP #2
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 671 - 768
Target Start/End: Complemental strand, 37287069 - 37286972
Alignment:
Q  671 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaatttt 768  Q
    ||||||||  |||||||||||||||||  ||||||| ||||| |||||||||| |||||||||  ||||||||||||||||||||| |||||||||||    
T  37287069 ttgtattcttattattattatagtggaagtttaagatgcttaagggtcccgtgatttttcctttttcacattgagaaggttttccatgctaaaatttt 37286972  T

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Target: chr4; HSP #3
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 654 - 766
Target Start/End: Complemental strand, 42683038 - 42682924
Alignment:
Q  654 cacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 751  Q
    ||||| ||||||||| | ||||||||||||||| ||||||||||| | |||||||||   | |||||||||| ||||||||| |||||||||||||||||    
T  42683038 cacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggtccaagggtcccgtgatttttcctttctcacattgagaaggtt 42682939  T
Q  752 ttccacgctaaaatt 766  Q
    ||||||||| |||||    
T  42682938 ttccacgctgaaatt 42682924  T

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Target: chr4; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 25003713 - 25003544
Alignment:
Q  1 gttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtg 100  Q
    |||| ||||||||||||||||||||||||||||||||| || || |||||||| || |||||||| |||||||| |||||||||||         | |||    
T  25003713 gttccctattgtgatagtcaaagtgcaattcacctcagaaataactcgacata-caatcaaggtc-aaacacatagatgtgaggta---------atgtg 25003625  T
Q  101 atgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaa 185  Q
    ||||||||||||| | ||| ||||||| ||||||||   ||||| ||||||| ||  || |||||||||||||| ||||| ||||    
T  25003624 atgtgttagagaa-agactactgcaaaaagagaaaa---acaccgatgacaaagggacaaatatgatgacaaaaactctaccaaa 25003544  T

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Target: chr2 (Bit Score: 46; Significance: 1e-16; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 671 - 764
Target Start/End: Original strand, 37037942 - 37038035
Alignment:
Q  671 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaa 764  Q
    |||||||| ||||||  |||||||| |  ||||||||||  | |||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  37037942 ttgtattctcattatcgttatagtgaaagtttaagaggcccaagggtcccgtggtttctcctttctcacattgagaaggttttcctcgctaaaa 37038035  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1028 - 1070
Target Start/End: Original strand, 7168968 - 7169010
Alignment:
Q  1028 ggaaagtcctgaatctttctccaataatcggtacccaaagtat 1070  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  7168968 ggaaaatcctgaatccttctccaataatcggtgcccaaagtat 7169010  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 831
Target Start/End: Original strand, 37038074 - 37038108
Alignment:
Q  797 agtgcctattttgagttcacggaggagggaaatta 831  Q
    ||||||||||||||||||||||||||| |||||||    
T  37038074 agtgcctattttgagttcacggaggagagaaatta 37038108  T

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Target: scaffold0003 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 671 - 849
Target Start/End: Complemental strand, 342404 - 342217
Alignment:
Q  671 ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttt-ttcc-ttactcacattgagaaggttttccacgctaaaattt 767  Q
    ||||||||||||||| ||||||||||| | ||||||||||  | || ||||||||||| |||| || |||| |||||||||||||| ||||||||||||     
T  342404 ttgtattcccattatcattatagtggaagttttaagaggcccaaggatcccgtggtttcttccatttctcatattgagaaggtttttcacgctaaaattc 342305  T
Q  768 tgttgtgtgtc---------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 849  Q
    | ||||||            |||| ||||||| ||||  ||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  342304 t-ttgtgtcattacgcttatatttcacgtttctgcta--gtgcctattttgagttcacggaggaggaaaattatgcaggcattttccaaca 342217  T

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Target: scaffold1004 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1004
Description:

Target: scaffold1004; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 1772 - 1727
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||    
T  1772 aaaggaggcaaaatcttgaatgttctaatggaagggttccacaaaa 1727  T

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Target: scaffold0760 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0760
Description:

Target: scaffold0760; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1193 - 1238
Target Start/End: Complemental strand, 4267 - 4222
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaa 1238  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||    
T  4267 aaaggaggcaaaatcttgaatgttctaatggaagggttccacaaaa 4222  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1193 - 1247
Target Start/End: Complemental strand, 88751 - 88697
Alignment:
Q  1193 aaaggaggcaatatcttgaattttctaatggaagggttacacaaaagagaagaag 1247  Q
    ||||||||||||| |||||||||||  ||||||||||| ||||||| || |||||    
T  88751 aaaggaggcaataccttgaattttcggatggaagggttccacaaaatagcagaag 88697  T

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