View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14445_low_14 (Length: 518)
Name: NF14445_low_14
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14445_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 33964621 - 33964300
Alignment:
| Q |
1 |
atagaacggcctctcttgtgatgaggtcacccgatttggttgtaggatcatcatcagacgaggaggaatggaacattggtaactagatctagttcttatc |
100 |
Q |
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| T |
33964621 |
atagaacggcttctcttgtgatgaggtcacccgatttggttgtaggatcatcatcagacgaggaggaatggaacactggtaactaggtctagttcttgtc |
33964522 |
T |
|
| Q |
101 |
attttcttaggccttggatagctatatagtaggatggtacaccttctatgctcttagaaattaaggaatgggnnnnnnnttgagcaaagatcttgtaacg |
200 |
Q |
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| T |
33964521 |
attttcttaggccttggatagctatatagtaggatggtacaccttctatgctcttagaaagtaaggaatgggaaaaaaattgagcaaagatcttgtaacg |
33964422 |
T |
|
| Q |
201 |
cttacctaaattttttgaagcataattatcttgaagtccatttgtcgtagttagggttcttatagtgtttgaaggttgtattccaaatttcatgatattg |
300 |
Q |
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|||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33964421 |
cttacctaaaatttttgaagcataa-tatcttgaagtccatttgtcgtagttagggttcttatagtgtttgaaggttgtattccaaatttcatgatattg |
33964323 |
T |
|
| Q |
301 |
aaaagtccattggtatgttattc |
323 |
Q |
| |
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||||||||||||||||| ||||| |
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| T |
33964322 |
aaaagtccattggtatggtattc |
33964300 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 356 - 495
Target Start/End: Complemental strand, 33964124 - 33963985
Alignment:
| Q |
356 |
atattcaaatgaatcatgtgatacaaatcaaagaaaacaaacagacaatatgatgaacacaaaaaggctagtcctaaacaagaactgtcttatatctgaa |
455 |
Q |
| |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
33964124 |
atattcaaatgaatcatgtgatgcaaatcaaagaaaacaaacagacaatatgatgaacacaaaaaggctagtcctaaacaagaattgtcttatatctgat |
33964025 |
T |
|
| Q |
456 |
ttatttttcctgatttgattagcctctatgttcttatata |
495 |
Q |
| |
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||||||||||| |||||||||||||||||||||||||||| |
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| T |
33964024 |
ttatttttccttatttgattagcctctatgttcttatata |
33963985 |
T |
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