View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14445_low_6 (Length: 665)

Name: NF14445_low_6
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14445_low_6
NF14445_low_6
[»] chr4 (38 HSPs)
chr4 (1-654)||(28929658-28930316)
chr4 (74-219)||(5609202-5609347)
chr4 (46-219)||(40058852-40059025)
chr4 (73-219)||(34844758-34844904)
chr4 (46-93)||(37980145-37980192)
chr4 (46-196)||(54127365-54127515)
chr4 (46-93)||(56409982-56410029)
chr4 (12-105)||(29195093-29195186)
chr4 (73-218)||(52983670-52983815)
chr4 (340-397)||(10185559-10185616)
chr4 (77-220)||(34723854-34723997)
chr4 (76-219)||(45787704-45787847)
chr4 (13-96)||(4088242-4088324)
chr4 (73-219)||(27528795-27528941)
chr4 (73-219)||(32986248-32986394)
chr4 (14-89)||(38206127-38206201)
chr4 (46-146)||(13771555-13771656)
chr4 (21-93)||(37492715-37492785)
chr4 (158-218)||(42508382-42508442)
chr4 (73-219)||(19660532-19660678)
chr4 (46-93)||(21344848-21344895)
chr4 (46-93)||(25434656-25434703)
chr4 (14-92)||(37109349-37109427)
chr4 (46-92)||(7093400-7093446)
chr4 (158-220)||(23639760-23639822)
chr4 (158-220)||(23645418-23645480)
chr4 (97-219)||(36131510-36131631)
chr4 (46-84)||(42281240-42281278)
chr4 (46-146)||(25852238-25852338)
chr4 (46-87)||(31141347-31141388)
chr4 (73-193)||(33696305-33696425)
chr4 (21-105)||(37455576-37455660)
chr4 (46-105)||(5998672-5998732)
chr4 (46-125)||(13873388-13873468)
chr4 (158-218)||(24273358-24273418)
chr4 (21-105)||(32475080-32475163)
chr4 (46-93)||(32992643-32992691)
chr4 (46-93)||(46295128-46295176)
[»] chr5 (27 HSPs)
chr5 (46-220)||(15485290-15485464)
chr5 (46-219)||(32059440-32059613)
chr5 (97-219)||(4603853-4603974)
chr5 (73-219)||(8484661-8484807)
chr5 (73-219)||(27498731-27498877)
chr5 (58-200)||(31206278-31206421)
chr5 (46-219)||(12398448-12398621)
chr5 (46-219)||(19145412-19145584)
chr5 (21-94)||(16172980-16173052)
chr5 (73-219)||(18207258-18207404)
chr5 (46-195)||(16247025-16247174)
chr5 (73-219)||(19456211-19456355)
chr5 (46-219)||(30485852-30486025)
chr5 (46-195)||(33025504-33025653)
chr5 (46-219)||(31287946-31288119)
chr5 (100-219)||(9659311-9659429)
chr5 (172-219)||(10837446-10837493)
chr5 (46-93)||(31669022-31669069)
chr5 (73-219)||(38684259-38684404)
chr5 (23-89)||(14656645-14656710)
chr5 (97-195)||(22253168-22253266)
chr5 (158-203)||(23016719-23016764)
chr5 (46-87)||(32340340-32340381)
chr5 (46-142)||(36895449-36895545)
chr5 (53-89)||(8780509-8780545)
chr5 (99-219)||(10869565-10869684)
chr5 (46-116)||(16773838-16773910)
[»] chr2 (31 HSPs)
chr2 (13-217)||(43963866-43964065)
chr2 (46-211)||(26176206-26176370)
chr2 (72-219)||(15038009-15038156)
chr2 (97-199)||(35943759-35943861)
chr2 (46-93)||(6099516-6099563)
chr2 (46-219)||(8192352-8192524)
chr2 (97-219)||(28668949-28669070)
chr2 (46-94)||(26482124-26482172)
chr2 (73-219)||(30466830-30466976)
chr2 (73-219)||(33827573-33827719)
chr2 (73-219)||(44946053-44946199)
chr2 (73-194)||(17324817-17324937)
chr2 (158-219)||(14486961-14487022)
chr2 (13-93)||(29503270-29503350)
chr2 (45-90)||(32526214-32526259)
chr2 (46-94)||(3697396-3697444)
chr2 (132-220)||(31778141-31778229)
chr2 (14-116)||(42327368-42327471)
chr2 (46-145)||(43374399-43374498)
chr2 (132-219)||(41329952-41330039)
chr2 (158-220)||(6006889-6006951)
chr2 (158-220)||(6714294-6714356)
chr2 (137-219)||(7250339-7250420)
chr2 (173-219)||(9946676-9946722)
chr2 (97-219)||(11941210-11941331)
chr2 (179-219)||(714125-714165)
chr2 (159-219)||(13747500-13747560)
chr2 (46-90)||(19605974-19606018)
chr2 (60-111)||(30943134-30943186)
chr2 (323-387)||(35123588-35123652)
chr2 (46-90)||(38341761-38341805)
[»] chr3 (54 HSPs)
chr3 (13-200)||(34844370-34844555)
chr3 (46-219)||(48977412-48977585)
chr3 (72-196)||(51532839-51532963)
chr3 (72-191)||(7470244-7470362)
chr3 (73-219)||(15566500-15566645)
chr3 (73-219)||(35492962-35493108)
chr3 (73-219)||(49258262-49258408)
chr3 (97-219)||(10083819-10083940)
chr3 (97-219)||(10190742-10190863)
chr3 (16-220)||(10682815-10683017)
chr3 (58-150)||(27887464-27887557)
chr3 (46-219)||(30257648-30257821)
chr3 (46-92)||(31714348-31714394)
chr3 (16-94)||(42799744-42799821)
chr3 (46-95)||(18316494-18316543)
chr3 (75-219)||(53233911-53234054)
chr3 (120-220)||(10538126-10538225)
chr3 (72-219)||(40133449-40133596)
chr3 (77-219)||(8097279-8097421)
chr3 (73-219)||(8456150-8456296)
chr3 (14-93)||(11092167-11092245)
chr3 (73-219)||(26174164-26174310)
chr3 (73-219)||(46576399-46576545)
chr3 (73-219)||(52821636-52821781)
chr3 (12-93)||(40268487-40268567)
chr3 (158-219)||(50731237-50731298)
chr3 (158-219)||(50781556-50781617)
chr3 (171-219)||(7195956-7196004)
chr3 (100-219)||(8958035-8958154)
chr3 (46-90)||(35623267-35623311)
chr3 (73-219)||(25289715-25289860)
chr3 (158-197)||(26599450-26599489)
chr3 (97-220)||(32151500-32151622)
chr3 (73-219)||(39041852-39041998)
chr3 (160-203)||(53167681-53167724)
chr3 (72-146)||(53288785-53288859)
chr3 (73-219)||(53424177-53424322)
chr3 (158-200)||(3869845-3869887)
chr3 (46-123)||(7485620-7485698)
chr3 (16-93)||(19716199-19716276)
chr3 (73-194)||(25379812-25379933)
chr3 (97-147)||(39604682-39604732)
chr3 (162-200)||(40302665-40302703)
chr3 (46-92)||(53863866-53863912)
chr3 (47-92)||(40777045-40777090)
chr3 (46-94)||(54990733-54990782)
chr3 (53-219)||(6041670-6041838)
chr3 (46-94)||(7207641-7207689)
chr3 (21-93)||(15034352-15034423)
chr3 (46-93)||(16900678-16900726)
chr3 (73-220)||(34492574-34492721)
chr3 (13-93)||(43303757-43303836)
chr3 (162-218)||(49030043-49030099)
chr3 (46-90)||(50162067-50162111)
[»] chr6 (21 HSPs)
chr6 (45-217)||(17149458-17149630)
chr6 (46-219)||(9208276-9208449)
chr6 (46-200)||(6383893-6384047)
chr6 (73-218)||(9239026-9239171)
chr6 (73-194)||(11448922-11449043)
chr6 (46-219)||(15360098-15360271)
chr6 (73-219)||(1344986-1345132)
chr6 (75-219)||(34147399-34147543)
chr6 (75-219)||(34160015-34160159)
chr6 (73-220)||(654145-654292)
chr6 (100-220)||(28672146-28672265)
chr6 (73-219)||(3222636-3222781)
chr6 (100-219)||(9690638-9690756)
chr6 (50-92)||(6691549-6691591)
chr6 (73-194)||(12390476-12390597)
chr6 (519-651)||(30056724-30056857)
chr6 (46-116)||(14557993-14558064)
chr6 (47-90)||(28741970-28742013)
chr6 (50-94)||(3433598-3433642)
chr6 (73-220)||(11840952-11841098)
chr6 (46-105)||(28028561-28028621)
[»] chr8 (37 HSPs)
chr8 (46-219)||(18128541-18128714)
chr8 (46-219)||(4718673-4718846)
chr8 (73-219)||(32879334-32879480)
chr8 (73-218)||(28193529-28193674)
chr8 (72-219)||(2166753-2166897)
chr8 (73-219)||(34237655-34237801)
chr8 (46-219)||(3734623-3734796)
chr8 (46-150)||(26168918-26169021)
chr8 (46-111)||(40136942-40137007)
chr8 (13-111)||(16852339-16852438)
chr8 (14-93)||(6530807-6530885)
chr8 (133-200)||(9126482-9126549)
chr8 (73-219)||(21603285-21603431)
chr8 (60-146)||(24339696-24339782)
chr8 (73-219)||(39349311-39349457)
chr8 (46-220)||(34639207-34639379)
chr8 (97-219)||(42328084-42328205)
chr8 (16-92)||(3624582-3624658)
chr8 (75-219)||(34610687-34610831)
chr8 (76-219)||(8765526-8765669)
chr8 (13-111)||(18897165-18897264)
chr8 (72-219)||(20305962-20306109)
chr8 (72-219)||(21092595-21092742)
chr8 (46-111)||(11979283-11979350)
chr8 (49-92)||(29855417-29855460)
chr8 (160-219)||(34694575-34694634)
chr8 (45-146)||(27746408-27746509)
chr8 (13-93)||(19703484-19703564)
chr8 (46-87)||(22779686-22779727)
chr8 (14-90)||(33727873-33727949)
chr8 (171-219)||(4584980-4585028)
chr8 (46-90)||(9126584-9126628)
chr8 (13-89)||(22268935-22269010)
chr8 (14-85)||(26688865-26688936)
chr8 (13-92)||(28566104-28566182)
chr8 (13-92)||(28573727-28573805)
chr8 (46-93)||(28787493-28787541)
[»] chr1 (36 HSPs)
chr1 (12-200)||(37046983-37047170)
chr1 (72-196)||(30677226-30677350)
chr1 (73-219)||(4621237-4621383)
chr1 (73-219)||(24122074-24122220)
chr1 (14-135)||(39964505-39964626)
chr1 (50-196)||(2755594-2755741)
chr1 (73-219)||(15059402-15059548)
chr1 (14-93)||(15581139-15581217)
chr1 (73-219)||(24674444-24674590)
chr1 (158-220)||(1486556-1486618)
chr1 (46-146)||(9500428-9500528)
chr1 (100-220)||(1378977-1379095)
chr1 (46-93)||(4825002-4825050)
chr1 (45-93)||(6127984-6128032)
chr1 (73-184)||(8077698-8077809)
chr1 (137-197)||(20999185-20999245)
chr1 (46-93)||(31605845-31605893)
chr1 (158-218)||(37351454-37351514)
chr1 (46-89)||(24217002-24217045)
chr1 (46-93)||(38939233-38939280)
chr1 (13-219)||(39714650-39714855)
chr1 (73-194)||(7766752-7766873)
chr1 (73-218)||(17935820-17935965)
chr1 (46-95)||(21273471-21273521)
chr1 (132-218)||(34778449-34778535)
chr1 (12-90)||(39012289-39012366)
chr1 (58-116)||(52029909-52029970)
chr1 (158-220)||(52135262-52135324)
chr1 (45-90)||(13857843-13857888)
chr1 (76-200)||(16899557-16899681)
chr1 (50-91)||(18928367-18928408)
chr1 (158-219)||(27159221-27159282)
chr1 (97-214)||(32930825-32930941)
chr1 (46-87)||(47360517-47360558)
chr1 (13-92)||(11063555-11063634)
chr1 (46-90)||(44417462-44417506)
[»] scaffold0019 (1 HSPs)
scaffold0019 (73-219)||(161860-162006)
[»] chr7 (38 HSPs)
chr7 (72-219)||(654705-654851)
chr7 (73-219)||(22119943-22120089)
chr7 (73-219)||(40542910-40543056)
chr7 (46-219)||(2751299-2751472)
chr7 (73-220)||(7275332-7275479)
chr7 (73-219)||(27009414-27009561)
chr7 (73-219)||(18044162-18044308)
chr7 (14-93)||(25956290-25956368)
chr7 (70-219)||(11909954-11910103)
chr7 (158-219)||(12211535-12211596)
chr7 (12-106)||(43215182-43215277)
chr7 (70-154)||(1469164-1469248)
chr7 (73-219)||(22703541-22703687)
chr7 (73-219)||(29861725-29861871)
chr7 (14-92)||(33869443-33869521)
chr7 (97-219)||(2344379-2344500)
chr7 (46-219)||(11997877-11998050)
chr7 (159-204)||(674451-674496)
chr7 (73-146)||(36772376-36772448)
chr7 (158-219)||(38372980-38373041)
chr7 (14-93)||(5579231-5579310)
chr7 (97-193)||(23012534-23012629)
chr7 (49-116)||(25132352-25132420)
chr7 (73-219)||(10091243-10091388)
chr7 (73-219)||(17196950-17197096)
chr7 (73-219)||(21217833-21217979)
chr7 (14-92)||(26459408-26459486)
chr7 (73-219)||(41907514-41907659)
chr7 (132-219)||(42913513-42913600)
chr7 (73-194)||(2103110-2103230)
chr7 (46-218)||(19421259-19421431)
chr7 (45-90)||(22696347-22696392)
chr7 (127-200)||(23636584-23636657)
chr7 (158-219)||(27312292-27312353)
chr7 (163-219)||(17279676-17279732)
chr7 (46-93)||(22760894-22760942)
chr7 (46-90)||(28646997-28647041)
chr7 (49-93)||(46279048-46279092)
[»] scaffold0576 (1 HSPs)
scaffold0576 (46-219)||(5082-5255)
[»] scaffold0623 (1 HSPs)
scaffold0623 (73-220)||(1056-1202)
[»] scaffold0366 (2 HSPs)
scaffold0366 (73-219)||(9300-9445)
scaffold0366 (98-193)||(12027-12120)
[»] scaffold0160 (1 HSPs)
scaffold0160 (53-219)||(29143-29308)
[»] scaffold0015 (1 HSPs)
scaffold0015 (78-200)||(72545-72670)
[»] scaffold0026 (1 HSPs)
scaffold0026 (158-219)||(5967-6028)
[»] scaffold0070 (1 HSPs)
scaffold0070 (73-219)||(40376-40521)
[»] scaffold0049 (1 HSPs)
scaffold0049 (132-219)||(66864-66951)
[»] scaffold0016 (1 HSPs)
scaffold0016 (98-219)||(32365-32484)
[»] scaffold0189 (1 HSPs)
scaffold0189 (50-94)||(17720-17764)
[»] scaffold0459 (1 HSPs)
scaffold0459 (98-193)||(10720-10813)
[»] scaffold0221 (1 HSPs)
scaffold0221 (45-110)||(2888-2955)
[»] scaffold0102 (1 HSPs)
scaffold0102 (73-219)||(39143-39289)
[»] scaffold1175 (1 HSPs)
scaffold1175 (113-219)||(2426-2531)


Alignment Details
Target: chr4 (Bit Score: 543; Significance: 0; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 1 - 654
Target Start/End: Original strand, 28929658 - 28930316
Alignment:
Q  1 atattaacgttaaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctccttatgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28929658 atattaacgttaaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattccccttatgcc 28929757  T
Q  101 aatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcctt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28929758 aatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcctt 28929857  T
Q  201 agattagataccgagtttttgnnnnnnnnnnnnnnncatactaacattgactgtttaaagaaaaaagtaaggtcagtaagttgtatgaggttggtttaaa 300  Q
    |||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28929858 agattagataccgagtttttgaaaaaagacaaaaaacatactaacattgactgtttaaagaaaaaagtaaggtcagtaagttgtatgaggttggtttaaa 28929957  T
Q  301 catataatgatgttattaaggaatgtaactttgaaggttgagtattttgatttatgaatggttaattctatgaagcacatacattcttgggtttagtcgc 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28929958 catataatgatgttattaaggaatgtaactttgaaggttgagtattttgatttatgaatggttaattctatgaagcacatacattcttgggtttagtcgc 28930057  T
Q  401 atcaacgaaccatggtgtcaatcacggatttcagaaaatagtggtatgttcaaattaatcacctcagtgaacctccctgttcaaatactg--nnnnnnnn 498  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||              
T  28930058 atcaacgaaccatggtgtcaatcacggatttcagaaaatagtgttatgttcaaattaatcacctcagtgaacctccctgttcaaatactgtttttttttt 28930157  T
Q  499 nnaac---cttggcgctctatcagttaaaaggtgatggtatttctgtcaggttggaatgaattgttttctggttttgctgcaatcggtctgtgctgtagg 595  Q
      |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28930158 ttaaccttcttggcgctctatcagttaaaaggtgatggtatttctgtcaggttggaatgaattgttttctggttttgctgcaatcgttctgtgctgtagg 28930257  T
Q  596 cttcggctgagtttattttgctgccatggttgttggtgtgtttgggttggatgatgtcc 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28930258 cttcggctgagtttattttgctgccatggttgttggtgtgtttgggttggatgttgtcc 28930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 5609347 - 5609202
Alignment:
Q  74 ggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttgg 172  Q
    ||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   |||||||||||| ||    
T  5609347 ggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccccgcaagtggacggtggg 5609249  T
Q  173 attggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||  |||||| ||||||||| | ||| |||  |||||||||||||    
T  5609248 attgatcccctcggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 40059025 - 40058852
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||| |  |||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  40059025 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 40058927  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||||||| |||| ||||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  40058926 aacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 34844904 - 34844758
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  34844904 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 34844806  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  34844805 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 37980192 - 37980145
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  37980192 ttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctcc 37980145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 54127515 - 54127365
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   |||||||||||||| |||| | ||| ||||||||| ||||| ||||||  ||||| |||| |||| ||||||||    
T  54127515 ttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagct-tgctctggcttta 54127417  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    || | |||||   ||||||| |||| ||||||| |||||| |||||||||||    
T  54127416 aacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggt 54127365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 56409982 - 56410029
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  56409982 ttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctcc 56410029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 29195093 - 29195186
Alignment:
Q  12 aaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaattt 105  Q
    |||||||| |||||||| ||| || ||||| |||| ||||||||| ||||||||||| |||||||| || ||||||||||| || ||||||||||    
T  29195093 aaaacccacttgggttggcctggtggtgttggctt-gggaccttggagtgtgctcctctcaaggtcgcaagttcgattctctctaatgccaattt 29195186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 218
Target Start/End: Original strand, 52983670 - 52983815
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  |||||||||  |||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  52983670 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 52983768  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    |||||| |||||| ||||||||| | ||| |||  ||||||||||||    
T  52983769 gattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 10185559 - 10185616
Alignment:
Q  340 gagtattttgatttatgaatggttaattctatgaagcacatacattcttgggtttagt 397  Q
    ||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||    
T  10185559 gagtattttaatttatgaatgtaaaattctatgaagcacatacactcttgggtttagt 10185616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 34723854 - 34723997
Alignment:
Q  77 ctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggatt 175  Q
    |||||||||||||| | ||  ||||||||| ||||| |||||| ||||||||||| |||| |||||||||| | |||||   |||||||  ||| |||||    
T  34723854 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagct-tgctctggctttaaacggggcccccgcaagtgggtggtgggatt 34723952  T
Q  176 ggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    || || ||| ||||||||| | ||| |||  ||||||||||||||    
T  34723953 ggtcctctcggattagtcgattcttggatcggataccgagttttt 34723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 45787847 - 45787704
Alignment:
Q  76 tctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggat 174  Q
    ||||||||||||||| | || ||||||||||  |||| |||||| |||||| |||| |||| ||||||||||   |||||   |||||||||||| ||||    
T  45787847 tctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagct-tgctctggctttaaacagggcccccgcaagtggacggtgggat 45787749  T
Q  175 tggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||| ||||||  |||||||| | ||| |||  |||||||||||||    
T  45787748 tggtcccctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 4088242 - 4088324
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta 96  Q
    |||||||||||||||| ||  || ||||| |||| |  |||||| || ||| ||||||||||||||||||||||||||||||||    
T  4088242 aaacccatttgggttggccgcgtggtgttggctt-gaaaccttggagggtggtcctttcaaggtctcaggttcgattctcctta 4088324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 27528941 - 27528795
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||| | | |||||   ||||||| ||||      
T  27528941 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttatacggggcccccgcaagtgggcggtga 27528843  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  27528842 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 32986248 - 32986394
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    ||||||||||||| |||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| || ||||||||| |||||   ||||||| |||| |    
T  32986248 aggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctgactttaaatggggcccccgcaagtgggcggtgg 32986346  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| || |||||| | ||| |||  |||||||||||||    
T  32986347 gattggtcccctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 38206201 - 38206127
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgatt 89  Q
    |||||| |||||||||||| || ||| | |||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  38206201 aacccacttgggttgacctggtggtgctggctt-gggaccttggagtgtgctcctctcaaggtctcaggtttgatt 38206127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 13771656 - 13771555
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||||||| ||||| | |||||||||||  |||||||| | || ||| |||| | ||||| |||||| ||||| |||||||||| ||||||||    
T  13771656 ttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccctctgatgtcaatctcggtgggctaagtccatacgaagctatgctctggcttta 13771557  T
Q  145 aa 146  Q
    ||    
T  13771556 aa 13771555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 37492785 - 37492715
Alignment:
Q  21 ttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||||| ||| |||||||| |  ||||||||||| |||||| |||| |||||||||||||||||| |||||    
T  37492785 ttgggttggcctggtagtgttgg--ttgggaccttggagtgtgatcctctcaaggtctcaggttcgactctcc 37492715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 42508442 - 42508382
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    ||||||| |||||| ||||| ||||||  ||||||||||  ||||||||||||||||||||    
T  42508442 caagtgggcggttgaattggtcccctcgaattagtcggttattagattagataccgagttt 42508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 19660678 - 19660532
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||| ||||||| || |||| ||||| |||||  ||||| |||||| |||| |||| ||||||||||   |||||   ||||||| |||| |    
T  19660678 aggtctcaggtttgattctctctgatgcaaatttcggtgggataagtccatacagagct-tgctctggctttaaacagggcccccgcaagtgggcggtgg 19660580  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||  |||||| ||||||||| | ||| |||  |||||||||||||    
T  19660579 gattgatcccctcggattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 21344848 - 21344895
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| ||||||||||| ||||||||||| |||| |||||||    
T  21344848 ttgggaccttggagtgtgctcctctcaaggtctcatgttcaattctcc 21344895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 25434703 - 25434656
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| |||||||| || ||||||||||||||| ||||||||    
T  25434703 ttgggaccttggagtgtgcttctctcaaggtctcaggtttgattctcc 25434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 37109427 - 37109349
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctc 92  Q
    |||||| |||||||| |||||| || || |||| ||||||| | |||||||||||  |||||||||||||||||||||||    
T  37109427 aacccacttgggttggcctagtggtattggctt-gggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 37109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 7093400 - 7093446
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc 92  Q
    |||||| |||| ||||||||||||||||||| | |||||||||||||    
T  7093400 ttgggatcttggagtgtgctcctttcaaggttttaggttcgattctc 7093446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 23639760 - 23639822
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||||||||| ||||||| |||||| ||||||||| | ||| |||  ||||||||||||||    
T  23639760 caagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttt 23639822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 23645418 - 23645480
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||||||||| ||||||| |||||| ||||||||| | ||| |||  ||||||||||||||    
T  23645418 caagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttt 23645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 36131631 - 36131510
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||||| |||||| |||||| |||| |||| || ||||||| | | |||    |||||| |||| ||||||| |||||| ||||||||| |    
T  36131631 tgccaatttcggtggcctaagtccatacagagct-tgctatgactttaaacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgat 36131533  T
Q  197 ccttagattagataccgagtttt 219  Q
      |||||| ||||||||||||||    
T  36131532 tattagatcagataccgagtttt 36131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 42281278 - 42281240
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggtt 84  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  42281278 ttgggaccttgtagtgtgctcctctcaaggtctcaggtt 42281240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 25852238 - 25852338
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  25852238 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 25852336  T
Q  145 aa 146  Q
    ||    
T  25852337 aa 25852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 31141388 - 31141347
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcga 87  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||    
T  31141388 ttgggaccttggagtgtgctcctctcaaggtctgaggttcga 31141347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 33696425 - 33696305
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    ||||||||||||| |||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   ||||||| ||||      
T  33696425 aggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccccgcaagtgggcggtga 33696327  T
Q  172 gattggacccctcagattagtc 193  Q
    |||||| || ||| ||||||||    
T  33696326 gattggtcctctcggattagtc 33696305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 37455576 - 37455660
Alignment:
Q  21 ttgggttgacctagtagtgttagctttgggacctt-gaagtgtgctcctttcaaggtctcaggttcgattctccttatgccaattt 105  Q
    |||||||| ||| || ||||| |||| |||||||| | ||| ||||||| ||||||||||||||||||||| |||  |||||||||    
T  37455576 ttgggttggcctggtggtgttggctt-gggacctttggagtatgctcctctcaaggtctcaggttcgattcccctggtgccaattt 37455660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 5998732 - 5998672
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcg-attctccttatgccaattt 105  Q
    ||||||||||| ||||||||||| |||||||||||  |||| || |||||| |||||||||    
T  5998732 ttgggaccttggagtgtgctcctctcaaggtctcacattcgaatcctccttgtgccaattt 5998672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 13873468 - 13873388
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcataca 125  Q
    |||||| |||| ||| ||||||||  ||||||||||||||||||| | ||  ||||||||| ||| | |||||||||||||    
T  13873468 ttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcggtaggctaagttcataca 13873388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 24273358 - 24273418
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    |||||||  ||| ||||||  ||| |||||||||||||||||| ||| |||||||||||||    
T  24273358 caagtgggtggtaggattgatcccatcagattagtcggtccttggatcagataccgagttt 24273418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 32475163 - 32475080
Alignment:
Q  21 ttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctccttatgccaattt 105  Q
    ||||||||  ||||| ||||| |||| |||||| || ||||  ||||| ||||||||||||||||||||||| || | |||||||    
T  32475163 ttgggttggtctagtggtgttggctt-gggaccctggagtgaactcctctcaaggtctcaggttcgattctctttgtaccaattt 32475080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 32992643 - 32992691
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||||||||    
T  32992643 ttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctcc 32992691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 46295128 - 46295176
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    ||||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  46295128 ttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctcc 46295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 8e-32; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 15485464 - 15485290
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaa 145  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||| |  ||||||| |||||  ||||| |||||||| ||||| | |||||||||    
T  15485464 ttgggaccttggagtgtgctcctctcaaggtctcaggttcgattcccctgacaccaatttcggtgggttaagtccatacaaaactatgttctggctttaa 15485365  T
Q  146 atgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    ||| || ||   |||||||| ||| |||||||||||||| ||||||||||  ||||| || ||||| ||||||||    
T  15485364 atggggtccccgcaagtggatggtgggattggacccctcggattagtcggctcttaggttggatacagagttttt 15485290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 32059613 - 32059440
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc-tccttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  32059613 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 32059515  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||||||| |||| ||||||| |||||| ||||||||||||||| |||  |||||||||||||    
T  32059514 aacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 4603853 - 4603974
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| | ||| |||||| |||||| ||||  ||| |||||||||| | ||||| | |||||||||||| ||||||| |||||| |||||||||||    
T  4603853 tgccaatttcgatgggctaagtccatacagagctc-gctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggt 4603951  T
Q  197 ccttagattagataccgagtttt 219  Q
    |||| |||  |||||||||||||    
T  4603952 ccttggatcggataccgagtttt 4603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 8484807 - 8484661
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||| ||||| | ||  ||||||||| ||||| ||||||||||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  8484807 aggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 8484709  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  8484708 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 27498877 - 27498731
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  27498877 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 27498779  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  27498778 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 31206278 - 31206421
Alignment:
Q  58 agtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccat 156  Q
    ||||||||||  |||||||||||||||  |||| || |  |||||||||   ||| |||||| |||||| ||||||||| | |||||||||| | |||      
T  31206278 agtgtgctccgctcaaggtctcaggttttattccccctggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaatgggaccccc 31206377  T
Q  157 tcaagtggacggttggattggacccctcagattagtcggtcctt 200  Q
     |||||||||||| ||||||||| |||| |||||||||||||||    
T  31206378 acaagtggacggtgggattggactcctcggattagtcggtcctt 31206421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 12398621 - 12398448
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| |  |  || |||||| ||||| ||||||||||||| |||| |||| ||||||||    
T  12398621 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagct-tgctctggcttta 12398523  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||   ||| ||||||||  |||||  || |||| |||||||||| ||| |||| |||||||||||||    
T  12398522 aatggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagtttt 12398448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 19145584 - 19145412
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||| |||||||||| |||||||||| | ||  ||||||||| ||||| | |||| |||||| |||| |||| ||||||||    
T  19145584 ttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggc-aagtccatacagagctttgctctggcttta 19145486  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| | |||   ||||||| |||| ||||||| |||||| ||||||| ||| ||| |||  |||||||||||||    
T  19145485 aatg-gtcccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 16173052 - 16172980
Alignment:
Q  21 ttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcct 94  Q
    |||||||| ||| |||||||| |||| | ||||||| ||||||||||| |||||||||||||||||||||||||    
T  16173052 ttgggttggcctggtagtgttggctt-gagaccttggagtgtgctcctctcaaggtctcaggttcgattctcct 16172980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 18207258 - 18207404
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | |   ||||||||| ||||| |||||| |||||| |||| || | |||||||||| |||||||   ||||||| |||| |    
T  18207258 aggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagct-tgttctggctttaaacgaggcccccgcaagtgggcggtgg 18207356  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  18207357 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 195
Target Start/End: Complemental strand, 16247174 - 16247025
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgat-tctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||  | ||   ||||||| | ||||| || ||| |||||| | || |||||||| ||||    
T  16247174 ttgggaccttgcagtgtgctcctatcaaggtctcaggttcaatcccccccggtgccaatcttggtgggct-agtccatacagaactttgctttgggttta 16247076  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcgg 195  Q
    |||| |  ||   |||||||||||| |||||||||||||| ||||||||||    
T  16247075 aatgggctccccacaagtggacggtgggattggacccctcggattagtcgg 16247025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 19456355 - 19456211
Alignment:
Q  73 aggtctcaggttcgattctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttgg 172  Q
    |||||||||||||||| |  ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| ||    
T  19456355 aggtctcaggttcgatccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggccccg-caagtgggcggtggg 19456258  T
Q  173 attggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  19456257 attggtcccctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 30485852 - 30486025
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||||   |||||||||||||||||| | ||  || |||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  30485852 ttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagct-tgctctggcttta 30485950  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || || ||||   ||||||| |||| ||||||| |||||| ||||||||  | ||| |||  |||||||||||||    
T  30485951 aacgatgcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 195
Target Start/End: Original strand, 33025504 - 33025653
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctt-atgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||||||||||| ||||| |||||  || ||||| |||| ||||| |||| | |||  ||||| |||||||||||||||| ||||||||    
T  33025504 ttgggatcttggagtgtgctcctctcaagatctcaactttgattccccttgatgccgatttcgatggattaagtccatacaaagctatgctctggcttta 33025603  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcgg 195  Q
    ||| ||||||   ||||||||||   |||| |||| |||| ||||||||||    
T  33025604 aat-aggcccccacaagtggacgacgggatgggacgcctcggattagtcgg 33025653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 31288119 - 31287946
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||| ||||||||| | ||  ||||||||| |||||  ||||| ||||||||||| ||||||| |||||    
T  31288119 ttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatacaaagct-tgctttgacttta 31288021  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||||||| |||| ||||||| | ||||  |||||||||| ||| ||   |||||||||||||    
T  31288020 aacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagtttt 31287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 9659429 - 9659311
Alignment:
Q  100 caatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcct 199  Q
    |||||| ||||| |||||| |||||| |||| |||| |||||||||||| | |||   |||||||||||| ||||||| ||| || ||||||| | | ||    
T  9659429 caatttcggtgggctaagtccatacacagct-tgctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattct 9659331  T
Q  200 tagattagataccgagtttt 219  Q
    | |||  |||||||||||||    
T  9659330 tggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 10837446 - 10837493
Alignment:
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||||||||||| |||||||||||  |||||||||||||    
T  10837446 gattggtcccctcagattagttggtccttagatcggataccgagtttt 10837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 31669069 - 31669022
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| ||| ||||||| ||||||||| ||||||||||||||    
T  31669069 ttgggaccttggagtctgctcctctcaaggtcttaggttcgattctcc 31669022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 38684259 - 38684404
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||  |||| |    
T  38684259 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacg-ggcccccgcaagtgagcggtgg 38684356  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||| ||||    
T  38684357 gattggtcccctcggattagtcgattcttggatcggataccgattttt 38684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 14656710 - 14656645
Alignment:
Q  23 gggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgatt 89  Q
    |||||||||| || ||||| |||| | ||||||| ||| ||||||| ||||||||||||||||||||    
T  14656710 gggttgacctggttgtgttggctt-gagaccttggagtttgctcctctcaaggtctcaggttcgatt 14656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 22253266 - 22253168
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcgg 195  Q
    ||||||||| | ||| |||||| |||||||||||||| | ||| ||||||||||||||   ||| ||||| |  ||||| | ||||||| |||||||||    
T  22253266 tgccaatttcgatgggctaagtccatacaaagctatgttctggatttaaatgaggcccccacaactggacagcgggattcgtcccctcaaattagtcgg 22253168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 23016764 - 23016719
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttaga 203  Q
    ||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  23016764 caagtggacggtgagattggacccctcggattagtaggtccttaga 23016719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 32340381 - 32340340
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcga 87  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||    
T  32340381 ttgggaccttggagtgtgctcctctcaaggtcttaggttcga 32340340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 36895449 - 36895545
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctt 142  Q
    |||||| |||| ||||||||||| ||||||| ||| ||||||||| | ||  | ||||||| ||||||| |||| ||||||||||| |||| ||||||    
T  36895449 ttgggatcttggagtgtgctcctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtc-aagtccatacaaagctttgctctggctt 36895545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 8780509 - 8780545
Alignment:
Q  53 cttgaagtgtgctcctttcaaggtctcaggttcgatt 89  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  8780509 cttggagtgtgctcctctcaaggtctcaggttcgatt 8780545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 10869684 - 10869565
Alignment:
Q  99 ccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcc 198  Q
    ||||||| ||||| |||||| || ||  |||| |||| |||||||||||| ||||    ||||||| |||| ||||||| |||||| ||||||||||| |    
T  10869684 ccaatttcggtgggctaagtccacactgagct-tgctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttc 10869586  T
Q  199 ttagattagataccgagtttt 219  Q
    || |||  |||||| ||||||    
T  10869585 ttggatcggataccaagtttt 10869565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 16773838 - 16773910
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaa 116  Q
    ||||||||| | |||||||||||  || |||||||||||||||||||| || |||||||||| ||||| ||||    
T  16773838 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaa 16773910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 13 - 217
Target Start/End: Complemental strand, 43964065 - 43963866
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctt-atgccaatttgggtgg 111  Q
    ||||||| ||||||||  ||||||||||| | |||||||||||| ||||||||||| ||||||||||| ||| ||||| || | ||    |||| |||||    
T  43964065 aaacccacttgggttggtctagtagtgttgg-tttgggaccttggagtgtgctcctctcaaggtctcatgtttgattccccctgat----atttcggtgg 43963971  T
Q  112 tctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagatac 211  Q
      || ||||||||||| || |||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||||| |  | |||||    
T  43963970 gtta-gttcatacaaaactttgctttggttttaaatgagccccatgcaagtggacggtgggattggacccctcagattagttggtccttgggctggatac 43963872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 26176370 - 26176206
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||||||||  |||||||||| |||||||||||| ||||||||||| |  ||||||||| ||||| ||| || |||||| | || |||||||| ||||    
T  26176370 ttgggaccttggggtgtgctcctctcaaggtctcagattcgattctccctggtgccaattttggtggccta-gtccatacagacctttgctttggattta 26176272  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagatac 211  Q
    |||| |||||   |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||    
T  26176271 aatg-ggcccccgcaagtggacggtgggattggacccttcagattagtcggtccttaggctagatac 26176206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 15038009 - 15038156
Alignment:
Q  72 aaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| ||||||||||||||| |  ||||   ||||||| ||||     
T  15038009 aaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagct-tgctttggctttaaacggagcccccgcaagtgggcggtg 15038107  T
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||||||||||||||| | ||| |||  |||||||||||||    
T  15038108 ggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 35943759 - 35943861
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||| | |||||| ||||||  |||||| |||||||||||||   |||| | |||||||||||| |||||||||||||| ||||||| |||    
T  35943759 tgccaattttggtaggctaagtccatacagtgctatgatttggctttaaattgagcccctgcaagtggacggtgggattggacccctcggattagttggt 35943858  T
Q  197 cct 199  Q
    |||    
T  35943859 cct 35943861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 6099563 - 6099516
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6099563 ttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctcc 6099516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 8192524 - 8192352
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||| | ||  ||||||| | ||||| | |||| |||| | |||| |||| ||||||      
T  8192524 ttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggc-aagtccatatagagctttgctctggcttag 8192426  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | | |||   ||||||| |||| ||||||| |||||| ||||||||||||||| |||  |||||||||||||    
T  8192425 aacg-gcccctcgcaagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagtttt 8192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 28668949 - 28669070
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||||| |||||| |||||| |||| ||||||||||||||| | |||||   ||||||| |||| ||||||| |||||| ||||||||| |    
T  28668949 tgccaatttcggtggactaagtccatacagagct-tgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgat 28669047  T
Q  197 ccttagattagataccgagtttt 219  Q
      || |||  |||||||||||||    
T  28669048 ttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 26482124 - 26482172
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcct 94  Q
    ||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  26482124 ttgggacctaggagtgtgctcctctcaaggtctcaggttcgattctcct 26482172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 30466976 - 30466830
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||||   |||||   ||||||| | || |    
T  30466976 aggtctcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaaccgggcccccgcaagtgggcagtgg 30466878  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| ||| || ||||||||| | ||| |||  |||||||||||||    
T  30466877 gattggtcccttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 33827719 - 33827573
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| | ||| |||||| |||||| |||| |||| |||||||||| | | ||| | ||||||| |||| |    
T  33827719 aggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagct-tgctctggctttaaacgggacccctgcaagtgggcggtgg 33827621  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||  ||||||||| | ||| |||  |||||||||||||    
T  33827620 gattggtccccttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 44946199 - 44946053
Alignment:
Q  73 aggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| | || |||| |||||||||| | | |||   ||||||| |||| |    
T  44946199 aggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaact-tgctctggctttaaacgggccccccgcaagtgggcggtgg 44946101  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  44946100 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 17324817 - 17324937
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   ||||||| |||| |    
T  17324817 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatg-ggcccccacaagtgggcggtgg 17324914  T
Q  172 gattggacccctcagattagtcg 194  Q
    |||| | ||||||| ||||||||    
T  17324915 gattagtcccctcaaattagtcg 17324937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 14486961 - 14487022
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||| ||||||| |||||| ||||||||||||||| |||  |||||||||||||    
T  14486961 caagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 14487022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 29503270 - 29503350
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    ||||||| |||||||| |||||| || || | |||||||||| | |||||||||||  ||||||||||||||||||||||||    
T  29503270 aaacccacttgggttggcctagtggtattgg-tttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcc 29503350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 32526259 - 32526214
Alignment:
Q  45 tttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||    
T  32526259 tttgggatcttgaagtttgctcctctcaaggtctcaggttcgattc 32526214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 3697444 - 3697396
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcct 94  Q
    ||||||||||| || |||||||| |||||||||| ||||||||||||||    
T  3697444 ttgggaccttggagagtgctcctctcaaggtctctggttcgattctcct 3697396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 31778141 - 31778229
Alignment:
Q  132 tgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||| |||||||||||| |||||   ||||||||||||  |||||| || |||||||||||| || ||| |||  ||||||||||||||    
T  31778141 tgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagttttt 31778229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 42327471 - 42327368
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcct-tatgccaatttgggtgg 111  Q
    |||||| |||||||| |||||| || || |||| ||||||| | |||||||||||  ||||||||||||||||||||||| |   |||||||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggctt-gggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgg 42327373  T
Q  112 tctaa 116  Q
     ||||    
T  42327372 gctaa 42327368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 43374498 - 43374399
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||||   |||||||||||||||||| | ||  ||||||||| ||||| ||||||| |||||||||| |||| ||||||||    
T  43374498 ttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagct-tgctctggcttta 43374400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 41329952 - 41330039
Alignment:
Q  132 tgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||||||||| |||||   ||||||| ||||  |||||| |||||||||||||||||| ||| ||   |||||||||||||    
T  41329952 tgctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 6006951 - 6006889
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    ||||||||||||  |||||| | |||||||||||||| |||||  || |||||||||||||||    
T  6006951 caagtggacggtgtgattggtctcctcagattagtcgatccttgaatcagataccgagttttt 6006889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 6714356 - 6714294
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    ||||||||||||  |||||| ||||||| |||||||| | ||| |||| ||||||||||||||    
T  6714356 caagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagttttt 6714294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 7250339 - 7250420
Alignment:
Q  137 tggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||||||||| |||||  | |||||||| || |||||||||||||| |||||||| |||||| |   ||||||||||||||    
T  7250339 tggctttaaatg-ggccccctaaagtggacagtgggattggacccctcggattagtccgtccttgggccagataccgagtttt 7250420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 9946676 - 9946722
Alignment:
Q  173 attggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||| ||| |||||||||||||||||| ||||||||||||||    
T  9946676 attgaacccatcaaattagtcggtccttagatcagataccgagtttt 9946722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 11941331 - 11941210
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| |||||  ||||| |||||| |||| |||| |||||||||| | | |||   ||||||| |||| ||||||| |||||| ||||||||| |    
T  11941331 tgccaattttggtgggttaagtccatacagagct-tgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgat 11941233  T
Q  197 ccttagattagataccgagtttt 219  Q
     ||| |||  |||||||||||||    
T  11941232 tcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 714165 - 714125
Alignment:
Q  179 cccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||||||||||||| | |||||||| |||||||||||||    
T  714165 cccctcagattagtcgattcttagattggataccgagtttt 714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 13747560 - 13747500
Alignment:
Q  159 aagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||||||| ||||||| ||||||||||| |||| ||||| |||  |||||||| ||||    
T  13747560 aagtggacggtgggattgggcccctcagatttgtcgatccttggatcggataccgaatttt 13747500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 19606018 - 19605974
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    |||||| |||| |||| |||||| |||||||||||||||||||||    
T  19606018 ttgggatcttggagtgcgctcctctcaaggtctcaggttcgattc 19605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 30943134 - 30943186
Alignment:
Q  60 tgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtgg 111  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||||||| |||||    
T  30943134 tgtgctcctctcaaggtctcaagtttgattctctcttatgccaatttcggtgg 30943186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 387
Target Start/End: Complemental strand, 35123652 - 35123588
Alignment:
Q  323 atgtaactttgaaggttgagtattttgatttatgaatggttaattctatgaagcacatacattct 387  Q
    |||||||||||||| | ||||||||| ||||||  |||   |||| |||||||||||||||||||    
T  35123652 atgtaactttgaagatagagtattttaatttatttatgtaaaattttatgaagcacatacattct 35123588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 38341761 - 38341805
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    |||||| |||||||| ||||||| |||||||||||| ||||||||    
T  38341761 ttgggatcttgaagtttgctcctctcaaggtctcagattcgattc 38341805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 34844370 - 34844555
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc--tccttatgccaatttgggtg 110  Q
    ||||||| |||||||| ||| ||  |||| |||| | ||||||| ||||||||||| |||||||||||||||||||||  |||  | |||||||| ||||    
T  34844370 aaacccacttgggttgccctggtgttgttggctt-gagaccttggagtgtgctcctctcaaggtctcaggttcgattccctccaga-gccaatttcggtg 34844467  T
Q  111 gtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcctt 200  Q
    | ||| || |||||| |||| |||| |||||||||||| |||||   |||||||| ||| |||||||||||||| |||||||||||||||    
T  34844468 gacta-gtacatacagagctttgctatggctttaaatg-ggcccccgcaagtggatggtgggattggacccctcggattagtcggtcctt 34844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 48977412 - 48977585
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc-tccttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| |||||  ||||| |||||| |||| |||| ||||||||    
T  48977412 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagct-tgctctggcttta 48977510  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | ||||| | ||||||| |||| ||||||| |||||| ||||||||||||||| |||  |||||||||||||    
T  48977511 aacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 48977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 51532839 - 51532963
Alignment:
Q  72 aaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    ||||||||| ||||||||||| || |||||||||| ||||| |||||| |||||| |||| |||| |  ||||||||| | |||   ||||||||||||     
T  51532839 aaggtctcatgttcgattctctctaatgccaatttcggtgggctaagtccatacagagct-tgctctaactttaaatgggacccccgcaagtggacggtg 51532937  T
Q  171 ggattggacccctcagattagtcggt 196  Q
    ||||||| ||||||||||||||||||    
T  51532938 ggattggtcccctcagattagtcggt 51532963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 7470362 - 7470244
Alignment:
Q  72 aaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    ||||||||||||||||||| | || |||||||||| ||||| ||||||||||||| |||| |||| |||||||||| | ||||| | ||||||| | ||     
T  7470362 aaggtctcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagagct-tgctctggctttaaacggggccc-tgcaagtgggcagtg 7470265  T
Q  171 ggattggacccctcagattag 191  Q
    ||||||| |||||||||||||    
T  7470264 ggattggtcccctcagattag 7470244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 15566645 - 15566500
Alignment:
Q  73 aggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| |  || ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  15566645 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacg-ggcccccgcaagtgggcggtgg 15566548  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||||||||||||| | ||| |||  |||||||||||||    
T  15566547 gattggtcccctcagattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 35492962 - 35493108
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  35492962 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 35493060  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| ||||  ||||||||||||    
T  35493061 gattggtcccctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 49258408 - 49258262
Alignment:
Q  73 aggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| |  || ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  49258408 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccacaagtgggcggtgg 49258310  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  49258309 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 10083940 - 10083819
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   |||||||||||| ||||||| |||||| ||||||||| |    
T  10083940 tgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgat 10083842  T
Q  197 ccttagattagataccgagtttt 219  Q
     ||| |||  |||||||||||||    
T  10083841 tcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 10190863 - 10190742
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   |||||||||||| ||||||| |||||| ||||||||| |    
T  10190863 tgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgat 10190765  T
Q  197 ccttagattagataccgagtttt 219  Q
     ||| |||  |||||||||||||    
T  10190764 tcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 10683017 - 10682815
Alignment:
Q  16 cccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtct 114  Q
    |||| ||||||||| ||||| || || |||| | ||||||| |||||||| || |||| ||||||||||| |||||||||  | |||||||  | || ||    
T  10683017 cccacttgggttgatctagtggtattggctt-gagaccttggagtgtgcttctctcaaagtctcaggttcaattctccttggtcccaatttcagcgggct 10682919  T
Q  115 aagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccga 214  Q
    | || ||||||||||| |||  | |||||||||| | || |  ||||||||| || ||||||||||||||| |||||||||| |||||  | ||||||||    
T  10682918 a-gtccatacaaagctttgcgctagctttaaatgggacctacacaagtggacagtgggattggacccctcaaattagtcggt-cttaggctggataccga 10682821  T
Q  215 gttttt 220  Q
    ||||||    
T  10682820 gttttt 10682815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 27887464 - 27887557
Alignment:
Q  58 agtgtgctcctttcaaggtctcaggttcgattc-tccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgag 150  Q
    |||||||| || |||| |||| ||||||||||| |||||||| |||||| ||||| |||||| |||||  |||||||||||| |||||||||||    
T  27887464 agtgtgcttctctcaatgtcttaggttcgattcctccttatgtcaattttggtgggctaagtccatacgcagctatgctttgcctttaaatgag 27887557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 30257648 - 30257821
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| | ||| |||||| |||||| |||| |||| ||||||||    
T  30257648 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagct-tgctctggcttta 30257746  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||   ||||||| |||| | ||||| |||||| ||||||||| | ||| |||  |||||||| ||||    
T  30257747 aatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 31714348 - 31714394
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc 92  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  31714348 ttgggaccttgaagtgtgctcctctcaaggtctcaagttcgattctc 31714394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 42799821 - 42799744
Alignment:
Q  16 cccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcct 94  Q
    |||| |||||||| ||| || ||||| |||| ||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  42799821 cccacttgggttggcctggtggtgttggctt-gggaccttggagtgtgctcctctcaaggtctcaggttcgactctcct 42799744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 18316543 - 18316494
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctt 95  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  18316543 ttgggaccttggagtgtgctcctctcaaggtcttaggttcgattctcctt 18316494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 53234054 - 53233911
Alignment:
Q  75 gtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttgga 173  Q
    |||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||| |||| | |||||   ||||||| |||| |||    
T  53234054 gtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctctaaacggggcccccgcaagtgggcggtggga 53233956  T
Q  174 ttggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  53233955 ttggtcccctcggattagtcgattctt-gatcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 10538225 - 10538126
Alignment:
Q  120 catacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||||||| |||| | |||||||||| | || |  ||||||||| || ||||||||||||||| |||||||||| |||||  | |||||||||||||    
T  10538225 catacaaagctttgctctagctttaaatgggacctacgcaagtggacagtgggattggacccctcaaattagtcggt-cttaggctggataccgagtttt 10538127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 40133596 - 40133449
Alignment:
Q  72 aaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    ||||||||||||||||||| | ||  || |||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| ||||     
T  40133596 aaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtg 40133498  T
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| ||||||  |||||||| | ||| |||  |||||||||||||    
T  40133497 ggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 77 - 219
Target Start/End: Complemental strand, 8097421 - 8097279
Alignment:
Q  77 ctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggatt 175  Q
    |||||||||||||| | ||| ||| ||||| | ||| |||||| |||||| ||| ||||| |||||||||| | |||||   ||||||| |||| |||||    
T  8097421 ctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagc-atgctctggctttaaacggggcccccgcaagtgggcggtgggatt 8097323  T
Q  176 ggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || |||||| ||||||||| | ||| |||  |||||||||||||    
T  8097322 ggtcccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 8456296 - 8456150
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| | || |    
T  8456296 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcagtgg 8456198  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | |||  ||  |||||||||||||    
T  8456197 gattggtcccctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 11092245 - 11092167
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||| |||||||| |||||| ||||| |||| ||||||||| |||||||| || |||||||||||  |||||||||||    
T  11092245 aacccacttgggttggcctagtggtgttggctt-gggaccttgtagtgtgctactctcaaggtctcaacttcgattctcc 11092167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 26174164 - 26174310
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||  | ||  ||||||||| |||||  ||||| |||||| |||| |||| |||||||||||  |||||   ||||||| |||| |    
T  26174164 aggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagct-tgctctggctttaaatagggcccccgcaagtgggcggtgg 26174262  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  26174263 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 46576399 - 46576545
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  |||||||||  |||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  46576399 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtcg 46576497  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||  ||||||||| | ||| |||  |||||||||||||    
T  46576498 gattggtccccttggattagtcgattcttggatcggataccgagtttt 46576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 52821781 - 52821636
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||  |||||| |||||| |||| |||| |||||||||| | |||||  | |||||| |||| |    
T  52821781 aggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagct-tgctctggctttaaacggggccccgt-aagtgggcggtgg 52821684  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  52821683 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 40268487 - 40268567
Alignment:
Q  12 aaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||||| |||||||  ||| || ||||| |||| ||||||||| |||| |||||| | ||||||||||||||||||||||    
T  40268487 aaaacccacttgggtttgcctggtggtgttggctt-gggaccttggagtgggctcctcttaaggtctcaggttcgattctcc 40268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 50731298 - 50731237
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||| ||||||| |||||||||||||||| ||||| |||  |||||||||||||    
T  50731298 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 50781556 - 50781617
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||| ||||||| |||||||||||||||| ||||| |||  |||||||||||||    
T  50781556 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 7195956 - 7196004
Alignment:
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||||||||||||||| | ||| ||||||||||||||||||    
T  7195956 ggattggtcccctcagattagtcgattctttgattagataccgagtttt 7196004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 8958154 - 8958035
Alignment:
Q  100 caatttgggtggtctaagttcatacaaagctatgctttggctttaaa-tgaggcccattcaagtggacggttggattggacccctcagattagtcggtcc 198  Q
    |||||| ||||| |||||| ||||||||||| |||| | |||||||| || |||||   ||||||| |||| ||||||| |||||| ||||| ||| | |    
T  8958154 caattttggtgggctaagtccatacaaagct-tgctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattc 8958056  T
Q  199 ttagattagataccgagtttt 219  Q
    || ||| ||||||||||||||    
T  8958055 ttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 35623311 - 35623267
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||    
T  35623311 ttgggaccttggagtgtgctcctctcaaggtctcatgttcgattc 35623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 25289860 - 25289715
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  25289860 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 25289762  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||  |||||  |||||||| | ||| |||  |||||||||||||    
T  25289761 gattgg-tccctcgaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 26599450 - 26599489
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtc 197  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  26599450 caagtggacggtgggattggacccctcagattggtcggtc 26599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 32151500 - 32151622
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||||| ||||| ||||||| |||| |||| |||||||||| | |||||   ||||||| ||||  |||||| ||||||  |||||||| |    
T  32151500 tgccaatttcggtgggctaagctcatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgat 32151598  T
Q  197 ccttagattagataccgagttttt 220  Q
     ||| |||  ||||||||||||||    
T  32151599 tcttggatcggataccgagttttt 32151622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 39041998 - 39041852
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||| ||||||||||| ||  ||||||||| ||||| |||||| ||| || |||| |||| |||||||||| | |||||   |||||||  ||| |    
T  39041998 aggtctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagct-tgctctggctttaaacggggcccccgcaagtgggtggtgg 39041900  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| || ||| ||||||||| | ||| |||  |||||||||||||    
T  39041899 gattggtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 53167724 - 53167681
Alignment:
Q  160 agtggacggttggattggacccctcagattagtcggtccttaga 203  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||    
T  53167724 agtggacggtgggattgggcccctcggattagtcggtccttaga 53167681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 53288859 - 53288785
Alignment:
Q  72 aaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaa 146  Q
    ||||||||||| ||||||| | ||  ||||||||| ||||| |||||| ||||||||||| |||||||||||||||    
T  53288859 aaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagct-tgctttggctttaaa 53288785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 53424322 - 53424177
Alignment:
Q  73 aggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| || | |||| |||||||||| | |||||   ||||||  |||| |    
T  53424322 aggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtt-tgctatggctttaaacg-ggcccccgcaagtgagcggtgg 53424225  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  53424224 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 3869845 - 3869887
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtcctt 200  Q
    ||||| ||| || ||||||||||||||||||||||||||||||    
T  3869845 caagttgacagtgggattggacccctcagattagtcggtcctt 3869887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 7485698 - 7485620
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcata 123  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | || |||||||||| ||||| |||||||||||    
T  7485698 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggctaagttcata 7485620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 19716199 - 19716276
Alignment:
Q  16 cccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    ||||||||||||||| | || ||||| |||| |||||| || |||||||||||  |||||||||| |||||||||||||    
T  19716199 cccatttgggttgacatggtggtgttggctt-gggaccatggagtgtgctcctcctcaaggtctctggttcgattctcc 19716276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 25379812 - 25379933
Alignment:
Q  73 aggtctcaggttcgatt-ctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    ||||||||||||||||| || ||  ||||||||| || || |||||| |||||| |||| |||| |||||||||| | |||||   |||| || |||| |    
T  25379812 aggtctcaggttcgattccttctagtgccaatttcggagggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagcgggcggtgg 25379910  T
Q  172 gattggacccctcagattagtcg 194  Q
    |||||| |||||| |||||||||    
T  25379911 gattggtcccctcggattagtcg 25379933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 39604732 - 39604682
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaat 147  Q
    ||||||||| ||||| |||||| |||| ||| |||||||||||||||||||    
T  39604732 tgccaattttggtggactaagtccatataaatctatgctttggctttaaat 39604682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 40302703 - 40302665
Alignment:
Q  162 tggacggttggattggacccctcagattagtcggtcctt 200  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  40302703 tggacggtgggattggacccctcaaattagtcggtcctt 40302665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 53863912 - 53863866
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc 92  Q
    ||||||||||| ||||||||||| ||||||||| |||||| ||||||    
T  53863912 ttgggaccttggagtgtgctcctctcaaggtcttaggttcaattctc 53863866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 40777045 - 40777090
Alignment:
Q  47 tgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc 92  Q
    |||||| ||| ||||||||||| ||||||||||||||| |||||||    
T  40777045 tgggacattggagtgtgctcctctcaaggtctcaggtttgattctc 40777090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 54990733 - 54990782
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcct 94  Q
    ||||||||||| || ||||||||  |||||||||||||||||||||||||    
T  54990733 ttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctcct 54990782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 6041838 - 6041670
Alignment:
Q  53 cttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgagg 151  Q
    |||| ||| ||||||| ||||||  ||| ||||||||  || || ||||||||| |||||  ||||| |||||| || |||||| || ||||||| || |    
T  6041838 cttggagtttgctcctctcaaggagtcatgttcgattgcccctagtgccaatttcggtggattaagtccatacagagttatgctctgactttaaacgaag 6041739  T
Q  152 cccat-tcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||   |||| ||| ||||  |||||  ||||| |||||||||||| ||| ||| ||||||||||||||    
T  6041738 cccccctcaaatgggcggtgagattgttccccttagattagtcggttcttggatcagataccgagtttt 6041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 7207641 - 7207689
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcct 94  Q
    |||||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  7207641 ttgggaccttgaagggtgatcctcttaaggtttcaggttcgattctcct 7207689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 15034352 - 15034423
Alignment:
Q  21 ttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||||| ||| || ||||| || ||||||||||| || ||| |||| |||||||||||||||| |||||||    
T  15034352 ttgggttggcctggtggtgtt-gccttgggaccttggagggtgatcctctcaaggtctcaggttcaattctcc 15034423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 16900726 - 16900678
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||||||||    
T  16900726 ttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgattctcc 16900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 34492721 - 34492574
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||| ||||||||| | ||  ||||||||| | ||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  34492721 aggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 34492623  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||| ||  |||||||||| | | ||| |||  ||||||||||||||    
T  34492622 gattggtccattcagattagttgattcttggatctgataccgagttttt 34492574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 43303757 - 43303836
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||||||||||||| ||| || ||| | |||| | ||||||| || |||||||| || |||||||||||| ||||||||    
T  43303757 aaacccatttgggttggcctggtggtgatggctt-gagaccttggagcgtgctcctctccaggtctcaggtttgattctcc 43303836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 49030043 - 49030099
Alignment:
Q  162 tggacggttggattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    ||||||||  |||||| || |||||||||||||||||||| || | |||||||||||    
T  49030043 tggacggtgagattggtcctctcagattagtcggtccttatatcatataccgagttt 49030099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 50162067 - 50162111
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    |||||| ||||||||| |||||| |||||||||||| ||||||||    
T  50162067 ttgggatcttgaagtgcgctcctctcaaggtctcagattcgattc 50162111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 17149630 - 17149458
Alignment:
Q  45 tttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttt 143  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||| | ||  ||| ||||| ||| | | |||| |||||| |||  ||||||||||||    
T  17149630 tttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggc-aagtccatacagagccttgctttggcttt 17149532  T
Q  144 aaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtt 217  Q
    ||||| |||||   |||||| ||||| ||||||| ||||||  ||||||||||||||  || ||||||||||||    
T  17149531 aaatggggcccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 9208276 - 9208449
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||| ||||||||||||||||||||| || |  ||||||||| ||||| | |||| |||||| |||  |||||||||||||    
T  9208276 ttgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggc-aagtccatacagagccttgctttggcttta 9208374  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||   ||||||| |||| ||||||| | ||||||| |||||| | ||| ||| | ||||||||||||    
T  9208375 aatggggcccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 6384047 - 6383893
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaa 145  Q
    ||||||||||| ||||||||||| |||||||||||||||| || |  |   |||||||||  |||| || ||| |||| | |||| ||||||||||||||    
T  6384047 ttgggaccttggagtgtgctcctctcaaggtctcaggttcaatccctcgggtgccaatttcagtgggct-agtccataaagagctttgctttggctttaa 6383949  T
Q  146 atgaggcccattcaagtggacggttgga-ttggacccctcagattagtcggtcctt 200  Q
    ||| | |||   ||||||||| || ||| |||||||||||||||||||| ||||||    
T  6383948 atgggacccccacaagtggacagtgggatttggacccctcagattagtcagtcctt 6383893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 73 - 218
Target Start/End: Original strand, 9239026 - 9239171
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| |||||  ||||| |||| | |||| ||||||||||||||||| |||||   ||||||| |||| |    
T  9239026 aggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagct-tgctttggctttaaatggggcccccgcaagtgggcggtgg 9239124  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    |||||| |||||| ||||||||| | ||| |||  ||||||||||||    
T  9239125 gattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 11448922 - 11449043
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  11448922 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 11449020  T
Q  172 gattggacccctcagattagtcg 194  Q
    |||||| |||||| |||||||||    
T  11449021 gattggtcccctcggattagtcg 11449043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 15360271 - 15360098
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  15360271 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 15360173  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||| ||| |||| ||||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  15360172 aacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 1344986 - 1345132
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  |||||||||  |||| |||||| ||||||||||| |||| |||||||||| | | |||   |||||||||||| |    
T  1344986 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagct-tgctctggctttaaacgggccccccgcaagtggacggtgg 1345084  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||  ||||||||| | ||| |||  |||||||||||||    
T  1345085 gattggtccccttggattagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 34147399 - 34147543
Alignment:
Q  75 gtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttgga 173  Q
    |||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | | |||   ||||||| |||| |||    
T  34147399 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacgggccccccgcaagtgggcggtggga 34147497  T
Q  174 ttggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  34147498 ttggtcccctcggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 34160015 - 34160159
Alignment:
Q  75 gtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttgga 173  Q
    |||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | | |||   ||||||| |||| |||    
T  34160015 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacgggccccccgcaagtgggcggtggga 34160113  T
Q  174 ttggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  34160114 ttggtcccctcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 654292 - 654145
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | ||| |   ||||||| |||| |    
T  654292 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggctcccgcaagtgggcggtgg 654194  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||| |||||| ||||||||| |  || |||  ||||||||||||||    
T  654193 gattggtcccctcggattagtcgattattggatcggataccgagttttt 654145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 28672146 - 28672265
Alignment:
Q  100 caatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcct 199  Q
    |||||| ||||| |||||| |||||| |||| || |||||||||||| | | |||   ||||||| |||| ||||||| |||||| ||||||||| | ||    
T  28672146 caattttggtgggctaagtccatacagagct-tgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattct 28672244  T
Q  200 tagattagataccgagttttt 220  Q
    | ||| |||||||||||||||    
T  28672245 tggatcagataccgagttttt 28672265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 3222781 - 3222636
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| || ||||||| | |||||   ||||||| |||| |    
T  3222781 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctgtctttaaacggggccccg-caagtgggcggtgg 3222684  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  3222683 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 9690756 - 9690638
Alignment:
Q  100 caatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcct 199  Q
    |||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   |||||||||||| ||||||| || ||| ||||||||| | ||    
T  9690756 caatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattct 9690658  T
Q  200 tagattagataccgagtttt 219  Q
    | |||  |||||||||||||    
T  9690657 tggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 6691591 - 6691549
Alignment:
Q  50 gaccttgaagtgtgctcctttcaaggtctcaggttcgattctc 92  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  6691591 gaccttggagtgtgctcctctcaaggtctcaggttcgattctc 6691549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 12390476 - 12390597
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||||   |||||   ||||||| |||| |    
T  12390476 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacagggcccccgcaagtgggcggtgg 12390574  T
Q  172 gattggacccctcagattagtcg 194  Q
    |||||| |||||| |||||||||    
T  12390575 gattggtcccctcggattagtcg 12390597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 651
Target Start/End: Original strand, 30056724 - 30056857
Alignment:
Q  519 gttaaaaggtgatggtatttctgtcag-gttggaatgaattg-ttttctggttttgctgcaatcggtctgtgctgtaggcttcggctgagtttattttgc 616  Q
    |||||||| ||||||||||||||||||  || || ||||||| ||||| | |||| |||| | |||||| || |||| |||||||| ||||||| |||||    
T  30056724 gttaaaagatgatggtatttctgtcagatttagattgaattgtttttccgtttttcctgcgaacggtctatgttgtacgcttcggcagagttta-tttgc 30056822  T
Q  617 tgccatggttgttggtgtgtttgggttggatgatg 651  Q
    || | | ||||||||||| ||||  ||||||||||    
T  30056823 tgtcttagttgttggtgtttttgtcttggatgatg 30056857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 14557993 - 14558064
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctccttatgccaatttgggtggtctaa 116  Q
    ||||||||| |||||||||||||  ||  ||||||||||||||||||||   || |||||||||||||||||    
T  14557993 ttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctcccggtgtcaatttgggtggtctaa 14558064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 28742013 - 28741970
Alignment:
Q  47 tgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||    
T  28742013 tgggatcttggagtgtgctcctctcaaggtctcaggttcgattc 28741970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 3433642 - 3433598
Alignment:
Q  50 gaccttgaagtgtgctcctttcaaggtctcaggttcgattctcct 94  Q
    ||||||| ||| ||||||| |||||||||||||||||||| ||||    
T  3433642 gaccttggagtttgctcctctcaaggtctcaggttcgattttcct 3433598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 11840952 - 11841098
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||| ||||||| | ||  ||||||||| |||||  ||||| ||||||||||| |||||||| |||||| | |||||  | ||||||||||| |    
T  11840952 aggtctcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagct-tgctttggttttaaacggggccccat-aagtggacggtgg 11841049  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||| | ||||||  |||||||| |  || |||  ||||||||||||||    
T  11841050 gattagtcccctcgaattagtcgattattggatcggataccgagttttt 11841098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 28028561 - 28028621
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattct-ccttatgccaattt 105  Q
    ||||||||||  |||| |||||| ||||||||||| |||||||||| ||| ||||||||||    
T  28028561 ttgggacctttgagtgagctcctctcaaggtctcatgttcgattctccctgatgccaattt 28028621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 18128541 - 18128714
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||||||||||||||||||||||||| || |||||||||| ||  ||||||||| ||||| | || | |||| | |||| |||| ||||||||    
T  18128541 ttgggatcttgaagtgtgctcctttcaaggtcttagattcgattctctctggtgccaatttcggtgggcgaa-tccataaagagctttgctctggcttta 18128639  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||||||| |||| ||||||| || ||||||||||||||| ||| |||   ||||||||||||    
T  18128640 aacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 4718673 - 4718846
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||||   |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  4718673 ttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 4718771  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||||||| |||| ||||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  4718772 aacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 32879334 - 32879480
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| ||||||||||||| |||| |||| || | ||||| | |||||   ||||||| |||| |    
T  32879334 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagct-tgctctgacattaaacggggcccccacaagtgggcggtgg 32879432  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||| |||||||||||||    
T  32879433 gattggtcccctcggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 73 - 218
Target Start/End: Original strand, 28193529 - 28193674
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| |||||  ||||| |||||| |||| |||| |||||||||| | ||||| | ||||||| |||| |    
T  28193529 aggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagct-tgctctggctttaaacggggcccctacaagtgggcggtgg 28193627  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    |||||| |||||| ||||||||| | ||| |||  ||||||||||||    
T  28193628 gattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 2166753 - 2166897
Alignment:
Q  72 aaggtctcaggttcgattctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    ||||||||||||||||||| |||  |||||||||  || | |||||| |||||| |||| |||| ||||||||||| || |||   ||||||| |||| |    
T  2166753 aaggtctcaggttcgattc-cctcgtgccaatttcagtaggctaagtccatacagagct-tgctctggctttaaataagaccccg-caagtgggcggtgg 2166849  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||||||||||||| |  || |||| |||||||||||||    
T  2166850 gattggtcccctcagattagtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 34237801 - 34237655
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||  |||| |    
T  34237801 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgagcggtgg 34237703  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  34237702 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 3734796 - 3734623
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  3734796 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 3734698  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||| ||| | || ||||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  3734697 aacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 26169021 - 26168918
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgatt-ctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||| ||||||||||||||| |||| ||||| |||||||||| ||||| | ||||||||||| |||| || | ||||||||    
T  26169021 ttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggc-aagttcatacagagct-tgttctggcttta 26168924  T
Q  145 aatgag 150  Q
    ||||||    
T  26168923 aatgag 26168918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 40137007 - 40136942
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctccttatgccaatttgggtgg 111  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||   ||||||||| |||||    
T  40137007 ttgggaccttggagtgtgctcctctcaaggtctcaggtttgattctcccggtgccaatttcggtgg 40136942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 16852339 - 16852438
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcctta-tgccaatttgggtg 110  Q
    ||||||| |||||||| |||||| || || |||| ||||||| | |||||||||||  || |||||||||||||||||||||||| ||||||||| ||||    
T  16852339 aaacccacttgggttggcctagtggtattggctt-gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtg 16852437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 6530807 - 6530885
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||| |||||||| ||| || ||||| |||| ||||||| | ||||||||||| |||| |||||||||||||||||||    
T  6530807 aacccacttgggttggcctggtggtgttggctt-gggacctaggagtgtgctcctctcaatgtctcaggttcgattctcc 6530885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 9126549 - 9126482
Alignment:
Q  133 gctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcctt 200  Q
    |||||||||||||||| |  || | ||||| |||||| |||||||| |||||||||||||||||||||    
T  9126549 gctttggctttaaatgggaaccctgcaagtagacggtgggattggatccctcagattagtcggtcctt 9126482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 21603285 - 21603431
Alignment:
Q  73 aggtctcaggttcgattctcctta-tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| |  |  ||||||||| ||||| |||||  |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  21603285 aggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 21603383  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  21603384 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 24339782 - 24339696
Alignment:
Q  60 tgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaa 146  Q
    |||||| || ||||||||| |||||||||| || ||| | ||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  24339782 tgtgcttctctcaaggtcttaggttcgattttctcttgtaccaatttcggtgga-taagttcatacaaagctttgctttggctttaaa 24339696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 39349311 - 39349457
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  39349311 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 39349409  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||  |||||| ||||||||| | ||| |||  |||||| ||||||    
T  39349410 gattgatcccctcggattagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 34639379 - 34639207
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaa 145  Q
    |||||| |||| ||||||||||| ||||||||||||| ||||| |  ||  ||||||||| |||||  ||||| |||||| |||| |||| ||||||  |    
T  34639379 ttgggatcttggagtgtgctcctctcaaggtctcaggctcgatccctctggtgccaatttcggtgg-gtaagtccatacagagctttgctctggcttaga 34639281  T
Q  146 atgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    | | ||||  | |||||||||||| ||||||| ||| ||  |||| |||||||||  ||| |||||| |||||||    
T  34639280 acg-ggcctctgcaagtggacggtaggattggtcccttcgaattaatcggtccttgaattggataccaagttttt 34639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 42328084 - 42328205
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   |||||||||| | ||||||| ||||||  |||||||| |    
T  42328084 tgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgat 42328182  T
Q  197 ccttagattagataccgagtttt 219  Q
     ||| |||  |||||||||||||    
T  42328183 tcttggatcggataccgagtttt 42328205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 3624582 - 3624658
Alignment:
Q  16 cccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcct-ttcaaggtctcaggttcgattctc 92  Q
    |||| |||||||| |||||| || || |||| ||||||| | ||||||||||| ||||||||||||||||||||||||    
T  3624582 cccacttgggttggcctagtggtattggctt-gggacctgggagtgtgctcctcttcaaggtctcaggttcgattctc 3624658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 34610831 - 34610687
Alignment:
Q  75 gtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttgga 173  Q
    |||| ||||||||||| | || |||||||||| ||||||||||||  ||||| |||| |||| |||||||||| ||| |||   ||||||| |||| | |    
T  34610831 gtctgaggttcgattccctctgatgccaatttcggtggtctaagtctatacagagct-tgctctggctttaaacgagcccctcgcaagtgggcggtagaa 34610733  T
Q  174 ttggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| ||||||  |||||||| | ||| |||  |||||||||||||    
T  34610732 ttggtcccctcgaattagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 8765669 - 8765526
Alignment:
Q  76 tctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggat 174  Q
    ||||||||||||||| | ||  ||||||||| | ||| |||||| |||||| |||| |||| |||||||||| | ||| |   ||||||| |||| ||||    
T  8765669 tctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagct-tgctctggctttaaacggggctcccgcaagtgggcggtgggat 8765571  T
Q  175 tggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  8765570 tggtcccctcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 18897165 - 18897264
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattc-tccttatgccaatttgggtg 110  Q
    ||||||| |||||||| |||||| ||||| | |||||||||||  |||||||||||  ||||||||||| ||||||||| ||||  ||||||||| ||||    
T  18897165 aaacccacttgggttggcctagtggtgttgg-tttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaatttaggtg 18897263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 20305962 - 20306109
Alignment:
Q  72 aaggtctcaggttcgattc-tccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    |||||||||| |||||||| | ||  ||||||||| | ||| |||||| |||||| |||| |||| |||||||||| | | |||   ||||||| ||||     
T  20305962 aaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagct-tgctctggctttaaacgggacccccgcaagtgggcggtg 20306060  T
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| ||||||  |||||||| ||||| |||  |||||||||||||    
T  20306061 ggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 21092595 - 21092742
Alignment:
Q  72 aaggtctcaggttcgattc-tccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    |||||||||| |||||||| | ||  ||||||||| | ||| |||||| |||||| |||| |||| |||||||||| | | |||   ||||||| ||||     
T  21092595 aaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagct-tgctctggctttaaacgggacccccgcaagtgggcggtg 21092693  T
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| ||||||  |||||||| ||||| |||  |||||||||||||    
T  21092694 ggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 11979283 - 11979350
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattct-ccttatgccaatttgggtgg 111  Q
    |||||||||||||||||||| ||| ||||||||| ||||||| |||| ||| |||||||||| |||||    
T  11979283 ttgggaccttgaagtgtgcttcttctcaaggtcttaggttcggttctgcctgatgccaatttaggtgg 11979350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 29855460 - 29855417
Alignment:
Q  49 ggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc 92  Q
    |||||||| ||||||||||| | |||||||||||||||||||||    
T  29855460 ggaccttgtagtgtgctcctcttaaggtctcaggttcgattctc 29855417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 34694634 - 34694575
Alignment:
Q  160 agtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||||||| ||||||| ||||||||||||||| |||||| |||  |||| ||||||||    
T  34694634 agtggacggtgggattggtcccctcagattagtctgtccttggatcggataacgagtttt 34694575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 27746509 - 27746408
Alignment:
Q  45 tttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctt-atgccaatttgggtggtctaagttcatacaaagctatgctttggcttt 143  Q
    ||||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||    
T  27746509 tttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttt 27746411  T
Q  144 aaa 146  Q
    |||    
T  27746410 aaa 27746408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 19703564 - 19703484
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    ||||||| |||||||| |||||| || || |||| |||||||   |||||||||||  ||||||||||||||||||||||||    
T  19703564 aaacccacttgggttggcctagtggtattggctt-gggacctgagagtgtgctcctcctcaaggtctcaggttcgattctcc 19703484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 22779686 - 22779727
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcga 87  Q
    ||||||||||| | ||||||||| ||||||||||||||||||    
T  22779686 ttgggaccttggaatgtgctcctctcaaggtctcaggttcga 22779727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 33727949 - 33727873
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattc 90  Q
    ||||||||||||||| |||||| || | || |||| ||| | |||||||||||||  |||||||||||||||||||||    
T  33727949 aacccatttgggttgccctagtggtat-aggtttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattc 33727873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 4584980 - 4585028
Alignment:
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||||||||||| |||| ||||||  |||| |||||||||||||||    
T  4584980 ggattggacccctcaaattaatcggtcactagactagataccgagtttt 4585028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 9126628 - 9126584
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    ||||||||||| ||||||||||| |||||| |||| |||||||||    
T  9126628 ttgggaccttggagtgtgctcctctcaaggactcaagttcgattc 9126584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 22269010 - 22268935
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgatt 89  Q
    ||||||| |||||||| ||| || ||||| |||| ||||||||| ||||||||| | ||||||||||| ||| ||||    
T  22269010 aaacccacttgggttggcctggtggtgttggctt-gggaccttggagtgtgctcttctcaaggtctcaagtttgatt 22268935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 26688865 - 26688936
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcct-ttcaaggtctcaggttc 85  Q
    |||||| |||||||| ||| || ||||| |||| ||||||||| |||||||||||  ||||||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggctt-gggaccttggagtgtgctcctcctcaaggtctcaggttc 26688936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 28566104 - 28566182
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctc 92  Q
    ||||||| ||||||||||||||| || || | |||||||||||  |||||||||||| |||||| |||| |||||||||||    
T  28566104 aaacccacttgggttgacctagtggtatt-ggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattctc 28566182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 28573727 - 28573805
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctc 92  Q
    ||||||| ||||||||||||||| || || | |||||||||||  |||||||||||| |||||| |||| |||||||||||    
T  28573727 aaacccacttgggttgacctagtggtatt-ggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattctc 28573805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 28787541 - 28787493
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    |||||||||| ||||||||||||  ||||||||||||||| ||||||||    
T  28787541 ttgggaccttcaagtgtgctcctcctcaaggtctcaggtttgattctcc 28787493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 3e-19; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 37046983 - 37047170
Alignment:
Q  12 aaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgatt-ctccttatgccaatttgggtg 110  Q
    |||||||| ||||||||  || || ||||| |||| ||||||||| ||||||||||| ||||||||||||||| |||| | |||  | | ||||| ||||    
T  37046983 aaaacccacttgggttggtctggtggtgttggctt-gggaccttggagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtg 37047081  T
Q  111 gtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcctt 200  Q
    | || ||| |||||| |||| |||| | |||||||||| |||||   |||||||||||| |||||||||||||  |||||||||| ||||    
T  37047082 ggct-agtccatacagagctttgctctagctttaaatggggcccccacaagtggacggtgggattggacccctaggattagtcggccctt 37047170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 30677226 - 30677350
Alignment:
Q  72 aaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    ||||||||||||| ||||| | ||  ||||||||| ||||| |||||| |||||| |||| ||||||||||||||||| | |||   ||||||| ||||     
T  30677226 aaggtctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctttggctttaaatgggacccccgcaagtgggcggtg 30677324  T
Q  171 ggattggacccctcagattagtcggt 196  Q
    ||||||| ||||||||||||||||||    
T  30677325 ggattggtcccctcagattagtcggt 30677350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 4621383 - 4621237
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | || ||   ||||||| |||| |    
T  4621383 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggtccccgcaagtgggcggtgg 4621285  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  4621284 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 24122074 - 24122220
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | ||| |   ||||||| |||| |    
T  24122074 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggctcccgcaagtgggcggtgg 24122172  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  24122173 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 39964505 - 39964626
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggt 112  Q
    |||| |||||||||| |||||  ||||| |||| | ||||||| ||||||||||| ||||||||||||||| ||||| | ||  ||||||||| |||||     
T  39964505 aaccaatttgggttggcctagaggtgttggctt-gcgaccttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg 39964603  T
Q  113 ctaagttcatacaaagctatgct 135  Q
    || |||||| ||| |||||||||    
T  39964604 ctgagttcacacagagctatgct 39964626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 2755594 - 2755741
Alignment:
Q  50 gaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatg 148  Q
    ||||||||||| ||||| | ||||||||| ||||| |||| || ||  | ||||||  |||||  |||||||||||||||||||| | ||||||||||||    
T  2755594 gaccttgaagtatgctcatctcaaggtcttaggtttgattatctctgttaccaattgtggtgggttaagttcatacaaagctatgttatggctttaaatg 2755693  T
Q  149 aggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
       |||    ||||||||||| ||||||||| ||||  ||||||||||    
T  2755694 gccccctcataagtggacggtgggattggactcctcgaattagtcggt 2755741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 15059548 - 15059402
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | || ||   ||||||| ||||      
T  15059548 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggtccccgcaagtgggcggtga 15059450  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| ||||||  |||||||| | ||| |||  |||||||||||||    
T  15059449 gattggtcccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 15581217 - 15581139
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||| |||||||| ||| || ||||| |||| ||||||||| ||||||||||| | |||||||||||||| |||||||    
T  15581217 aacccacttgggttggcctggtggtgttggctt-gggaccttggagtgtgctcctctaaaggtctcaggttcaattctcc 15581139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 24674444 - 24674590
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  24674444 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 24674542  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| ||||||  |||||||| | ||| |||  |||||||| ||||    
T  24674543 gattggtcccctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 1486556 - 1486618
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||||||||| |||| || |||||| ||||||||||||||| |||  ||||||||||||||    
T  1486556 caagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagttttt 1486618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 9500528 - 9500428
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||||   |||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  9500528 ttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 9500430  T
Q  145 aa 146  Q
    ||    
T  9500429 aa 9500428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 1378977 - 1379095
Alignment:
Q  100 caatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcct 199  Q
    |||||| ||||| |||||| |||||| | || |||| |||||||||| | |||||   ||||||||||||  |||||| |||||||||||||||| | ||    
T  1378977 caatttcggtgggctaagtccatacagaact-tgctctggctttaaacg-ggcccccgcaagtggacggtgagattggtcccctcagattagtcgattct 1379074  T
Q  200 tagattagataccgagttttt 220  Q
    |||||  ||||||||| ||||    
T  1379075 tagatcggataccgagctttt 1379095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 4825002 - 4825050
Alignment:
Q  46 ttgggaccttgaagtgtgctcct-ttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  4825002 ttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctcc 4825050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 6128032 - 6127984
Alignment:
Q  45 tttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||||||||| || |||||||| ||||||||||| ||||||||||||    
T  6128032 tttgggaccttggagcgtgctcctctcaaggtctcaagttcgattctcc 6127984  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 8077698 - 8077809
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||||   |||||   ||||||| |||| |    
T  8077698 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacagggcccccgcaagtgggcggtgg 8077796  T
Q  172 gattggacccctc 184  Q
    |||||| ||||||    
T  8077797 gattggtcccctc 8077809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 20999245 - 20999185
Alignment:
Q  137 tggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtc 197  Q
    ||||||||||| |||| |  ||||||||||||| | |||||||||||| ||||||||||||    
T  20999245 tggctttaaataaggctccctcaagtggacggtggtattggacccctcggattagtcggtc 20999185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 31605893 - 31605845
Alignment:
Q  46 ttgggaccttgaagtgtgctcct-ttcaaggtctcaggttcgattctcc 93  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  31605893 ttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctcc 31605845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 37351514 - 37351454
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    ||||||| |||| ||||||| |||||| ||||||||||||||| |||  ||||||||||||    
T  37351514 caagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 24217002 - 24217045
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgatt 89  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||    
T  24217002 ttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 24217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 38939233 - 38939280
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  38939233 ttgggaccttggagtgtgctcctctcaaggtctctggtttgattctcc 38939280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 39714855 - 39714650
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcctta-tgccaatttgggtgg 111  Q
    ||||||| |||||||| | |||| | ||| |||| |||| |||| ||||||||||| ||||||||||| ||| |||||||||   |||| |||| |||||    
T  39714855 aaacccacttgggttggcatagtggcgttggctt-gggatcttggagtgtgctcctctcaaggtctcaagtttgattctcctcggtgccgatttcggtgg 39714757  T
Q  112 tctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagatac 211  Q
     ||| || ||     |||| |||| ||| |||||||| | |||   |||||||| ||| ||||||||| |||| ||||||||||||||| |  | |||||    
T  39714756 gcta-gtccaaggggagctttgctctggatttaaatgggccccccacaagtggatggtgggattggactcctcggattagtcggtccttgggctggatac 39714658  T
Q  212 cgagtttt 219  Q
    ||||||||    
T  39714657 cgagtttt 39714650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 7766873 - 7766752
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||| ||||| ||||| |||||| |||||| |||| |||| || ||||||| | |||||   ||||||| |||| |    
T  7766873 aggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagct-tgctctgactttaaacggggcccccgcaagtgggcggtgg 7766775  T
Q  172 gattggacccctcagattagtcg 194  Q
    |||||| |||||| |||||||||    
T  7766774 gattggtcccctcggattagtcg 7766752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 218
Target Start/End: Original strand, 17935820 - 17935965
Alignment:
Q  73 aggtctcaggttcgattc-tccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| || | |||| |||||||||| | |||||   ||||||| || | |    
T  17935820 aggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtt-tgctctggctttaaacggggcccccgcaagtgggcgatgg 17935918  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    |||||| || ||| ||||||||| | ||| |||  ||||||||||||    
T  17935919 gattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 21273471 - 21273521
Alignment:
Q  46 ttgggaccttgaagtgtgctcct-ttcaaggtctcaggttcgattctcctt 95  Q
    |||||||||||||||||| |||| ||||||||||| | |||||||||||||    
T  21273471 ttgggaccttgaagtgtggtcctcttcaaggtctcggattcgattctcctt 21273521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 34778449 - 34778535
Alignment:
Q  132 tgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    ||||||||||||||| | |||||   |||||||||||| ||||||| |||||  ||||||||| | ||| |||  ||||||||||||    
T  34778449 tgctttggctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 39012289 - 39012366
Alignment:
Q  12 aaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    |||||||| || ||||| |||||| ||||| |||| ||||||||| ||||||||| | ||||||||| ||||| |||||    
T  39012289 aaaacccactttggttggcctagtggtgttggctt-gggaccttggagtgtgctcttctcaaggtcttaggtttgattc 39012366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 52029970 - 52029909
Alignment:
Q  58 agtgtgctcctt-tcaaggtctcaggttcgattct--ccttatgccaatttgggtggtctaa 116  Q
    |||||||||||| ||||||||||||||||||||||  ||  |||||||||||||||| ||||    
T  52029970 agtgtgctccttctcaaggtctcaggttcgattctcccccgatgccaatttgggtgggctaa 52029909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 52135262 - 52135324
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||||||||| ||||||| ||||||| |||||||||| ||| |||  ||||| ||||||||    
T  52135262 caagtggacggtgggattggtcccctcatattagtcggttcttggatcggatactgagttttt 52135324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 13857888 - 13857843
Alignment:
Q  45 tttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    |||||||||||| || |||||||| |||||||||||||||| ||||    
T  13857888 tttgggaccttggagagtgctcctatcaaggtctcaggttcaattc 13857843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 16899557 - 16899681
Alignment:
Q  76 tctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggat 174  Q
    ||||||||||||||| | ||  ||||||||| ||||| | | || ||||||||||| |||| ||| ||  || | ||||| | ||||||||||||  |||    
T  16899557 tctcaggttcgattccctctggtgccaatttcggtgggcca-gtccatacaaagctttgctctggtttagaacggggcccctgcaagtggacggtgagat 16899655  T
Q  175 tggacccctcagattagtcggtcctt 200  Q
    ||| |||||| |||||||||||||||    
T  16899656 tggtcccctcggattagtcggtcctt 16899681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 18928367 - 18928408
Alignment:
Q  50 gaccttgaagtgtgctcctttcaaggtctcaggttcgattct 91  Q
    |||||| |||||||||||| |||||||||||||||| |||||    
T  18928367 gaccttaaagtgtgctcctctcaaggtctcaggttcaattct 18928408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 27159221 - 27159282
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||||||||| ||||||| |||||||||||||||| || || |||  |||| ||||||||    
T  27159221 caagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagtttt 27159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 32930825 - 32930941
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    |||| |||| ||||| |||||| ||| || |||| |||| |||||||||| | || || | |||||||| ||| ||||||  |||||||||||| ||| |    
T  32930825 tgcccattttggtgggctaagtccatgcagagct-tgctctggctttaaacggggtccctgcaagtggatggtgggattgatcccctcagattaatcgat 32930923  T
Q  197 ccttagattagataccga 214  Q
     |||||||| ||||||||    
T  32930924 tcttagattggataccga 32930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 47360558 - 47360517
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcga 87  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||    
T  47360558 ttgggaccttggagtgtgctcctctcaagatctcaggttcga 47360517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 11063555 - 11063634
Alignment:
Q  13 aaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcct-ttcaaggtctcaggttcgattctc 92  Q
    ||||||||||||||||| ||||| || || || |||||||||  ||||||| ||||  ||||||||| |||||||||||||    
T  11063555 aaacccatttgggttgatctagtggtattggc-ttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctc 11063634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 44417506 - 44417462
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    ||||||||||| |||||||| || ||||||||||||||| |||||    
T  44417506 ttgggaccttggagtgtgctgctctcaaggtctcaggtttgattc 44417462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 161860 - 162006
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||| |||| |||||   ||||||| |||| |    
T  161860 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttttaatggggcccccgcaagtgggcggtgg 161958  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| ||| ||||||||||||||    
T  161959 gattggtcccctcggattagtcgattcttggatcagataccgagtttt 162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 654851 - 654705
Alignment:
Q  72 aaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggtt 170  Q
    ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| ||||     
T  654851 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacg-ggcccccgcaagtgggcggtg 654754  T
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||||| ||||||||||| ||| |||  |||||||||||||    
T  654753 ggattggtcccctcggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 22119943 - 22120089
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  22119943 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 22120041  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  22120042 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 40543056 - 40542910
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  40543056 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 40542958  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  40542957 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 2751299 - 2751472
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  2751299 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 2751397  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||| ||| |||| ||||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  2751398 aacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 7275332 - 7275479
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||||   |||||   ||||||| |||| |    
T  7275332 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacagggcccccgcaagtgggcggtgg 7275430  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||| |||||| ||||||||| | ||| |||  ||||||||||||||    
T  7275431 gattggtcccctcggattagtcgattcttggatcggataccgagttttt 7275479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 27009414 - 27009561
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaa-gtggacggtt 170  Q
    |||||||||||||||| | | ||  ||||||||| ||||| |||||| |||||| |||| |||| || ||||||| | ||||| | ||| |||||||||     
T  27009414 aggtctcaggttcgatcccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctgactttaaacggggcccctgcaaagtggacggtg 27009512  T
Q  171 ggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| ||||||| |||||||| | ||| |||| |||||||||||||    
T  27009513 ggattggtcccctcaaattagtcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 18044162 - 18044308
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    ||||| |||||||||||| | ||| ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   |||||||  ||| |    
T  18044162 aggtcccaggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccacaagtgggtggtgg 18044260  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
     ||||| |||||||||||||||| | ||| |||  |||||||||||||    
T  18044261 aattggtcccctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 25956368 - 25956290
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    ||||||||||||||| |||||| || || |||| ||||||||| ||||||||||| ||||||||| |||||| |||||||    
T  25956368 aacccatttgggttggcctagtggtattggctt-gggaccttggagtgtgctcctctcaaggtcttaggttcaattctcc 25956290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 11910103 - 11909954
Alignment:
Q  70 tcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacgg 168  Q
    |||||||||||||||| ||| || ||  || |||||| ||||||| |||| ||||| ||||| || | | |||||||| ||||||| | |||||||||||    
T  11910103 tcaaggtctcaggttcaattttctctggtgtcaattttggtggtc-aagtccatacgaagctttgttctagctttaaacgaggcccctacaagtggacgg 11910005  T
Q  169 ttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    | ||||||| || |||  |||||||| |||||  |||||||| ||||||||    
T  11910004 tgggattggtcctctcgaattagtcgatccttgaattagatatcgagtttt 11909954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 12211596 - 12211535
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||| ||||||| |||||| |||||||||||||||  |||||||||||||||||    
T  12211596 caagtgggcggtaggattgggcccctctgattagtcggtccttgaattagataccgagtttt 12211535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 43215182 - 43215277
Alignment:
Q  12 aaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctc-cttatgccaatttg 106  Q
    |||||||| ||||||||  ||||| || || |||| ||||||| | |||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  43215182 aaaacccacttgggttggtctagtggtattggctt-gggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttg 43215277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 1469164 - 1469248
Alignment:
Q  70 tcaaggtctcaggttcgattctcctt--atgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggccc 154  Q
    |||||||||||||||||||| |||||  |||||||||| | ||| | |||| ||||||||||| | |||||||||||||||||||||    
T  1469164 tcaaggtctcaggttcgatt-tcctttaatgccaatttcgatgggc-aagtccatacaaagctttactttggctttaaatgaggccc 1469248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 22703541 - 22703687
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  || |||||| ||||| |||||| ||||||||||| |||| |||||||||| | | |||   ||||||| |||| |    
T  22703541 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagct-tgctctggctttaaacgggacccccgcaagtgggcggtgg 22703639  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| |||  |||||| ||||||    
T  22703640 gattggtcccctcggattagtcgattctttgatcggatacccagtttt 22703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 29861725 - 29861871
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| | || |||| |||||||||| | |||||   ||||||| |||| |    
T  29861725 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaact-tgctctggctttaaacggggcccccgcaagtgggcggtgg 29861823  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||  ||||||  |||||||| | |||||||  |||||||||||||    
T  29861824 gattgatcccctcgaattagtcgattcttagatcggataccgagtttt 29861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 33869521 - 33869443
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctc 92  Q
    |||||| |||||||| ||||||||| || |||| | ||||| |||||||||||||| |||||||||| ||||||||||||    
T  33869521 aacccacttgggttggcctagtagtattggctt-gagacctggaagtgtgctccttctcaaggtctctggttcgattctc 33869443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 2344379 - 2344500
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggt 196  Q
    ||||||||| ||||| |||||| |||||| |||| |  |||||||||||| | | |||   ||||||  |||| ||||||| |||||| |||||||||||    
T  2344379 tgccaattttggtgggctaagtccatacagagctttt-tttggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggt 2344477  T
Q  197 ccttagattagataccgagtttt 219  Q
    |||| |||  |||||||||||||    
T  2344478 ccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 11997877 - 11998050
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||| |  |||||||||||||||||| | ||  ||||||||| ||| | |||||| |||||| |||| |||| ||||||||    
T  11997877 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagct-tgctctggcttta 11997975  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||   |||||   ||||||| |||| ||||||| ||||||  |||||||| | ||| |||  |||||||||||||    
T  11997976 aactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 674496 - 674451
Alignment:
Q  159 aagtggacggttggattggacccctcagattagtcggtccttagat 204  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  674496 aagtggacggtgggattgatcccctcagattagtcggtccttagat 674451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 36772448 - 36772376
Alignment:
Q  73 aggtctcaggttcgattctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaa 146  Q
    |||||||||||| ||||  || ||||||||||| ||||| ||||||||||||| |||| |||| ||||||||||    
T  36772448 aggtctcaggtttgatttcccctatgccaatttcggtgggctaagttcatacagagct-tgctctggctttaaa 36772376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 38373041 - 38372980
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||||||||| |||||||||||||  ||||||||||||||| | | |||||| |||||||    
T  38373041 caagtggacggtgggattggaccccttggattagtcggtccttgggtcagatactgagtttt 38372980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 5579310 - 5579231
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcct-ttcaaggtctcaggttcgattctcc 93  Q
    |||||| |||||||||||| || ||||| |||| ||||||||| |||||||||||  ||||||||||||||| || |||||    
T  5579310 aacccacttgggttgacctggtggtgttggctt-gggaccttggagtgtgctcctcctcaaggtctcaggtttgactctcc 5579231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 23012629 - 23012534
Alignment:
Q  97 tgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtc 193  Q
    ||||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   ||||||| |||| ||||||| ||||||  |||||||    
T  23012629 tgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtc 23012534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 25132420 - 25132352
Alignment:
Q  49 ggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctccttatgccaatttgggtggtctaa 116  Q
    |||||| | |||||||||||| | ||||||||||||||||||||||  |||| ||||||||||| ||||    
T  25132420 ggacctaggagtgtgctccttcttaaggtctcaggttcgattctcccaatgctaatttgggtgggctaa 25132352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 10091243 - 10091388
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||   |||||||| ||||| |||||| |||||| |||| |||| |||||||||||| || ||   ||||||| |||| |    
T  10091243 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggtccccgcaagtgggcggtgg 10091341  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||  |||||| ||||||||| | ||| |||  |||||||||||||    
T  10091342 gattgatcccctcggattagtcgattctt-gatccgataccgagtttt 10091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 17197096 - 17196950
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||| ||||||||| | ||  ||||||||| ||||  |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  17197096 aggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 17196998  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| ||||||  |||||||| | ||| |||  |||||||||||||    
T  17196997 gattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 21217979 - 21217833
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | || |||||||||| ||||| |||||| |||||| |||| |||| | |||||||| | | |||   ||||||| |||| |    
T  21217979 aggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagct-tgctctagctttaaacgggccccccacaagtgggcggtgg 21217881  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||  |||||| ||||||| | | ||| |||  |||||||||||||    
T  21217880 gattgatcccctcggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 26459486 - 26459408
Alignment:
Q  14 aacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctc 92  Q
    |||||| |||||||| |||||| || || |||| ||||||| | |||||||||||  |||||||||||||||||||||||    
T  26459486 aacccacttgggttggcctagtggtattggctt-gggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 26459408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 41907659 - 41907514
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||||| ||  |||||||||  |||| |||||| |||||| || | |||| |||||||||| | |||||   |||||||  ||| |    
T  41907659 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggt-tgctctggctttaaacgtggcccccgcaagtgggtggtgg 41907561  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||| ||||||||||| | ||| |||  |||||||||||||    
T  41907560 gattggtcccc-cagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 42913600 - 42913513
Alignment:
Q  132 tgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||||||| | |||||   |||||||||||| ||||||| |||||| ||||||| | | |||||||  |||||||||||||    
T  42913600 tgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagtttt 42913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 2103110 - 2103230
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||   |||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   ||||||| |||| |    
T  2103110 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccccgcaagtgggcggtgg 2103208  T
Q  172 gattggacccctcagattagtcg 194  Q
    ||||||  ||||| |||||||||    
T  2103209 gattgg-tccctcggattagtcg 2103230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 19421259 - 19421431
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgatt-ctccttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| ||||||| |  ||||||||||||||||| || ||  || |||||| | ||| |||||| |||||| |||| |||| || |||||    
T  19421259 ttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagct-tgctctgacttta 19421357  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagttt 218  Q
    |||| ||| |   ||||||| |||| ||||||| | |||| ||||||||| | |||  || |||||||||||||    
T  19421358 aatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 22696347 - 22696392
Alignment:
Q  45 tttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    ||||||| |||| ||||||||||| ||||||||||||||| |||||    
T  22696347 tttgggatcttggagtgtgctcctctcaaggtctcaggtttgattc 22696392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 23636657 - 23636584
Alignment:
Q  127 agctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtcctt 200  Q
    |||| |||| |||||||||||| |||||   ||||| |||||| |||||||||  ||| |||||||||||||||    
T  23636657 agctttgctctggctttaaatggggccctcacaagtagacggtgggattggacttctcggattagtcggtcctt 23636584  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 27312292 - 27312353
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| |||| ||||||| |||||||||||||||| | ||| |||  |||||||||||||    
T  27312292 caagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 27312353  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 17279676 - 17279732
Alignment:
Q  163 ggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||| ||||||| ||||||| ||||||||||| || |||  |||||||||||||    
T  17279676 ggacggtgggattggtcccctcaaattagtcggtctttggatcggataccgagtttt 17279732  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 22760894 - 22760942
Alignment:
Q  46 ttgggaccttgaagtgtgctcctt-tcaaggtctcaggttcgattctcc 93  Q
    ||||||||| | |||||||||||  ||||||||||||||||||||||||    
T  22760894 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcc 22760942  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 28646997 - 28647041
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattc 90  Q
    |||||| |||| |||||||| || |||||||||||||||||||||    
T  28646997 ttgggatcttggagtgtgcttctctcaaggtctcaggttcgattc 28647041  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 46279048 - 46279092
Alignment:
Q  49 ggaccttgaagtgtgctcctttcaaggtctcaggttcgattctcc 93  Q
    |||||||| ||||||||||| |||||||||| |||| ||||||||    
T  46279048 ggaccttggagtgtgctcctctcaaggtctccggtttgattctcc 46279092  T

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Target: scaffold0576 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 5255 - 5082
Alignment:
Q  46 ttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggcttta 144  Q
    |||||| |||| ||| |||||||   ||||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| ||||||||    
T  5255 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggcttta 5157  T
Q  145 aatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    || | |||||   ||| ||| |||| ||||||| |||||| ||||||||| | ||| |||  |||||||||||||    
T  5156 aacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 5082  T

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Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 1202 - 1056
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||   |||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   |||||||||||| |    
T  1202 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccccgcaagtggacggtgg 1104  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagttttt 220  Q
    |||||| ||||||  |||||||| | ||| |||  ||||||||||||||    
T  1103 gattggtcccctcgaattagtcgattctt-gatcggataccgagttttt 1056  T

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Target: scaffold0366 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 9445 - 9300
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||   |||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   |||||||||||| |    
T  9445 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccccgcaagtggacggtgg 9347  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| ||||||  |||||||| | ||| |||  |||||||||||||    
T  9346 gattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 9300  T

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Target: scaffold0366; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 12120 - 12027
Alignment:
Q  98 gccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtc 193  Q
    |||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   |||||||||||| ||||||| ||||||  |||||||    
T  12120 gccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccca-caagtggacggtgggattggtcccctcgaattagtc 12027  T

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Target: scaffold0160 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 29308 - 29143
Alignment:
Q  53 cttgaagtgtgctcctttcaaggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgagg 151  Q
    ||||||||||| |||| ||||||||| ||||||||||| | || |||||| ||| ||| |  ||||| |||||| |||| |||| |||||| ||||| |     
T  29308 cttgaagtgtgttcctctcaaggtcttaggttcgattcccgctgatgccattttcggtcgg-taagtccatacagagctttgctctggcttaaaatg-ga 29211  T
Q  152 cccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||   ||| ||||| || ||||||| ||||||||||||||| |||||| |||  |||||||||||||    
T  29210 cccccgcaaatggacagtgggattggtcccctcagattagtcagtccttggatcggataccgagtttt 29143  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 72670 - 72545
Alignment:
Q  78 tcaggttcgattctcctt-atgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcc--cattcaagtggacggttggat 174  Q
    ||||||||||||| |||| ||| |||||| ||||| |||||| |||||| || |||||| ||| |||||||  ||||  |   |||||| ||||| ||||    
T  72670 tcaggttcgattcccctttatgtcaattttggtgggctaagtccatacagagttatgctctggttttaaatagggcctccccacaagtgaacggtgggat 72571  T
Q  175 tggacccctcagattagtcggtcctt 200  Q
    |||||||||||||| |||||||||||    
T  72570 tggacccctcagatgagtcggtcctt 72545  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 5967 - 6028
Alignment:
Q  158 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||||||||| ||||||| | |||||||||||||||||||| ||||||||| ||| ||||    
T  5967 caagtggacggtgggattggtcacctcagattagtcggtccttggattagatatcgaatttt 6028  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 40376 - 40521
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||||||||||||| | ||  ||||||||| ||||| |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| |    
T  40376 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgg 40474  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    ||||||  ||||| ||||||||| | ||| |||  |||||||||||||    
T  40475 gattgg-tccctcggattagtcgattcttggatcggataccgagtttt 40521  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 66864 - 66951
Alignment:
Q  132 tgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||| |||||||||| | |||||   ||||||| |||| ||||||| |||||| ||||||||||||||| |||  |||||||||||||    
T  66864 tgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 32365 - 32484
Alignment:
Q  98 gccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtc 197  Q
    |||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   |||||||  ||| ||||||| |||||| ||||||||| |     
T  32365 gccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagtcgatt 32463  T
Q  198 cttagattagataccgagtttt 219  Q
    ||| |||  |||||||||||||    
T  32464 ctt-gatcggataccgagtttt 32484  T

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Target: scaffold0189 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 17764 - 17720
Alignment:
Q  50 gaccttgaagtgtgctcctttcaaggtctcaggttcgattctcct 94  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||    
T  17764 gaccttggagtgttctcctctcaaggtctcaggttcgattctcct 17720  T

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Target: scaffold0459 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 10813 - 10720
Alignment:
Q  98 gccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtc 193  Q
    |||||||| ||||| |||||| |||||| |||| |||| |||||||||||| |||||   |||||||||||| ||||||| ||||||  |||||||    
T  10813 gccaatttcggtgggctaagtccatacagagct-tgctctggctttaaatggggcccca-caagtggacggtgggattggtcccctcgaattagtc 10720  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 2955 - 2888
Alignment:
Q  45 tttgggaccttgaagtgtgctcct-ttcaaggtctcaggttcgattctcc-ttatgccaatttgggtg 110  Q
    ||||||||||||||||||| ||||  | ||||||||| ||||||||||||  ||||||||||||||||    
T  2955 tttgggaccttgaagtgtgatcctccttaaggtctcaagttcgattctccactatgccaatttgggtg 2888  T

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Target: scaffold0102 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 39143 - 39289
Alignment:
Q  73 aggtctcaggttcgattctc-cttatgccaatttgggtggtctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttg 171  Q
    |||||||| ||||||||| | ||  ||||||||| ||||| ||| || |||||| | || || | |||||||||| | |||||   ||||||| |||| |    
T  39143 aggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaact-tgttctggctttaaacggggcccccgcaagtgggcggtgg 39241  T
Q  172 gattggacccctcagattagtcggtccttagattagataccgagtttt 219  Q
    |||||| |||||| ||||||||| | ||| ||| ||||||||||||||    
T  39242 gattggtcccctcggattagtcgattcttggatcagataccgagtttt 39289  T

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Target: scaffold1175 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 2531 - 2426
Alignment:
Q  113 ctaagttcatacaaagctatgctttggctttaaatgaggcccattcaagtggacggttggattggacccctcagattagtcggtccttagattagatacc 212  Q
    |||||| |||||| |||| |||| |||||||||| | |||||   ||||||| |||| ||||||| |||||| |||||||| ||||||  ||  ||||||    
T  2531 ctaagtccatacagagct-tgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggatacc 2433  T
Q  213 gagtttt 219  Q
    |||||||    
T  2432 gagtttt 2426  T

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