View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14445_low_65 (Length: 227)

Name: NF14445_low_65
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14445_low_65
NF14445_low_65
[»] chr8 (31 HSPs)
chr8 (24-213)||(42063461-42063650)
chr8 (25-213)||(19726628-19726816)
chr8 (25-213)||(40485468-40485656)
chr8 (25-213)||(41726273-41726461)
chr8 (25-213)||(30360455-30360643)
chr8 (25-213)||(3655857-3656045)
chr8 (24-213)||(14910094-14910283)
chr8 (25-213)||(13487065-13487252)
chr8 (25-213)||(31008450-31008638)
chr8 (24-213)||(36658514-36658695)
chr8 (77-213)||(5969918-5970054)
chr8 (26-205)||(44056425-44056604)
chr8 (25-205)||(18656555-18656727)
chr8 (24-188)||(36833903-36834067)
chr8 (77-213)||(39375166-39375302)
chr8 (79-205)||(27679187-27679313)
chr8 (25-205)||(4455278-4455450)
chr8 (25-194)||(12639292-12639461)
chr8 (24-125)||(8014924-8015025)
chr8 (97-194)||(39024465-39024562)
chr8 (41-125)||(28761684-28761768)
chr8 (24-127)||(32493186-32493289)
chr8 (41-127)||(6545699-6545785)
chr8 (25-163)||(29867728-29867866)
chr8 (25-127)||(597234-597335)
chr8 (25-127)||(20821797-20821899)
chr8 (25-115)||(26403637-26403727)
chr8 (25-120)||(11031030-11031125)
chr8 (66-127)||(31893207-31893268)
chr8 (24-120)||(40337560-40337656)
chr8 (25-149)||(36823421-36823545)
[»] chr7 (40 HSPs)
chr7 (25-213)||(44605847-44606035)
chr7 (24-213)||(36099603-36099792)
chr7 (25-213)||(11734157-11734345)
chr7 (25-213)||(36858133-36858321)
chr7 (24-213)||(29983234-29983423)
chr7 (24-208)||(16216925-16217109)
chr7 (24-213)||(47423452-47423633)
chr7 (26-213)||(10198308-10198495)
chr7 (25-213)||(24096635-24096823)
chr7 (27-198)||(33628189-33628360)
chr7 (25-213)||(20131268-20131456)
chr7 (22-211)||(16198626-16198814)
chr7 (25-125)||(45269453-45269553)
chr7 (25-212)||(46170641-46170828)
chr7 (25-127)||(9822519-9822621)
chr7 (25-127)||(10724444-10724546)
chr7 (25-115)||(14801973-14802063)
chr7 (25-115)||(15248965-15249055)
chr7 (146-213)||(14801907-14801974)
chr7 (146-213)||(15248899-15248966)
chr7 (25-211)||(31813488-31813674)
chr7 (24-122)||(34191909-34192007)
chr7 (24-125)||(1582154-1582255)
chr7 (27-115)||(5418899-5418987)
chr7 (25-125)||(10992719-10992819)
chr7 (25-125)||(34259277-34259377)
chr7 (25-120)||(30801677-30801772)
chr7 (71-127)||(25069344-25069400)
chr7 (25-120)||(31958642-31958737)
chr7 (83-125)||(33610648-33610690)
chr7 (77-127)||(45498883-45498933)
chr7 (24-120)||(29679288-29679384)
chr7 (67-127)||(46004176-46004236)
chr7 (25-127)||(17833666-17833767)
chr7 (63-120)||(8419975-8420032)
chr7 (23-120)||(16560917-16561014)
chr7 (23-120)||(16604648-16604745)
chr7 (26-117)||(26491978-26492066)
chr7 (68-113)||(39238057-39238102)
chr7 (70-122)||(20623194-20623246)
[»] chr1 (46 HSPs)
chr1 (22-213)||(28234796-28234987)
chr1 (25-213)||(42866278-42866466)
chr1 (24-213)||(3355399-3355588)
chr1 (24-213)||(44257769-44257958)
chr1 (48-213)||(24984083-24984248)
chr1 (25-213)||(46535189-46535369)
chr1 (25-210)||(12792670-12792847)
chr1 (25-213)||(48303118-48303297)
chr1 (25-207)||(50655447-50655628)
chr1 (25-213)||(9293642-9293810)
chr1 (24-213)||(1846829-1846999)
chr1 (77-213)||(4224995-4225131)
chr1 (24-205)||(37034810-37034982)
chr1 (77-205)||(5384697-5384825)
chr1 (24-125)||(33690158-33690259)
chr1 (25-127)||(3252226-3252328)
chr1 (26-212)||(7156148-7156333)
chr1 (25-121)||(45193206-45193302)
chr1 (25-211)||(3014089-3014274)
chr1 (25-211)||(44410712-44410898)
chr1 (25-193)||(32364121-32364289)
chr1 (24-125)||(18032286-18032387)
chr1 (25-127)||(962496-962598)
chr1 (25-125)||(20725983-20726083)
chr1 (26-127)||(3794153-3794247)
chr1 (25-211)||(16914407-16914593)
chr1 (25-126)||(19554196-19554297)
chr1 (25-130)||(49241642-49241747)
chr1 (67-127)||(46545422-46545482)
chr1 (25-122)||(20117850-20117947)
chr1 (28-125)||(50358969-50359066)
chr1 (63-125)||(27415233-27415295)
chr1 (24-117)||(31986096-31986189)
chr1 (24-126)||(24638701-24638800)
chr1 (25-127)||(51727056-51727158)
chr1 (25-130)||(28281976-28282081)
chr1 (25-106)||(41983794-41983875)
chr1 (25-86)||(45774760-45774821)
chr1 (94-127)||(52585217-52585250)
chr1 (67-127)||(11191411-11191471)
chr1 (24-71)||(45484175-45484222)
chr1 (79-149)||(8255962-8256032)
chr1 (158-212)||(34143556-34143610)
chr1 (85-122)||(4331964-4332001)
chr1 (24-125)||(43064706-43064807)
chr1 (24-120)||(50323329-50323425)
[»] chr3 (40 HSPs)
chr3 (25-213)||(30465001-30465189)
chr3 (24-208)||(29025258-29025442)
chr3 (25-213)||(39850695-39850883)
chr3 (25-213)||(23241777-23241965)
chr3 (24-213)||(33634882-33635071)
chr3 (25-213)||(2849180-2849367)
chr3 (77-213)||(26725596-26725732)
chr3 (25-213)||(55258012-55258187)
chr3 (77-208)||(44832455-44832586)
chr3 (25-213)||(37599801-37599976)
chr3 (22-213)||(10259129-10259300)
chr3 (25-198)||(33987149-33987322)
chr3 (81-213)||(11335577-11335709)
chr3 (25-205)||(52404273-52404445)
chr3 (80-213)||(45158515-45158648)
chr3 (129-213)||(11676175-11676259)
chr3 (24-127)||(53351170-53351273)
chr3 (25-211)||(29727737-29727923)
chr3 (25-211)||(51537106-51537292)
chr3 (24-212)||(45096287-45096476)
chr3 (80-198)||(5123809-5123927)
chr3 (25-127)||(42907769-42907871)
chr3 (25-127)||(35054710-35054812)
chr3 (24-125)||(42217164-42217265)
chr3 (25-97)||(11676262-11676333)
chr3 (24-127)||(11018704-11018806)
chr3 (24-211)||(11574993-11575180)
chr3 (26-107)||(11412513-11412594)
chr3 (24-125)||(15100603-15100704)
chr3 (25-198)||(27002522-27002686)
chr3 (22-211)||(41462271-41462460)
chr3 (50-125)||(6101923-6101998)
chr3 (25-151)||(51229487-51229613)
chr3 (64-211)||(50007211-50007358)
chr3 (77-130)||(39750162-39750215)
chr3 (23-211)||(44201107-44201285)
chr3 (24-120)||(45104119-45104215)
chr3 (25-97)||(53724061-53724133)
chr3 (67-127)||(6739472-6739532)
chr3 (90-126)||(41459676-41459712)
[»] chr6 (16 HSPs)
chr6 (21-212)||(24068113-24068304)
chr6 (24-213)||(21289550-21289738)
chr6 (24-198)||(30269592-30269766)
chr6 (25-213)||(22351167-22351347)
chr6 (27-213)||(31513289-31513474)
chr6 (24-205)||(13630202-13630375)
chr6 (25-194)||(8464281-8464450)
chr6 (24-120)||(23595690-23595786)
chr6 (25-118)||(6817290-6817383)
chr6 (24-125)||(29419771-29419864)
chr6 (25-151)||(21528818-21528944)
chr6 (25-125)||(30426318-30426418)
chr6 (134-213)||(31504663-31504741)
chr6 (63-125)||(11465359-11465421)
chr6 (25-79)||(34779971-34780025)
chr6 (64-120)||(13177838-13177894)
[»] chr2 (31 HSPs)
chr2 (24-213)||(17513019-17513208)
chr2 (25-213)||(24128753-24128941)
chr2 (25-213)||(23293101-23293289)
chr2 (25-213)||(7153437-7153624)
chr2 (48-213)||(39678327-39678492)
chr2 (25-213)||(37314857-37315037)
chr2 (25-213)||(35305211-35305399)
chr2 (25-213)||(39061844-39062024)
chr2 (24-213)||(29523806-29523987)
chr2 (26-213)||(31900414-31900593)
chr2 (77-205)||(14885343-14885471)
chr2 (25-149)||(3988705-3988829)
chr2 (25-127)||(19881939-19882041)
chr2 (24-125)||(32878717-32878818)
chr2 (24-210)||(16106633-16106819)
chr2 (24-125)||(10810561-10810662)
chr2 (25-192)||(21800619-21800786)
chr2 (21-125)||(23250965-23251069)
chr2 (25-125)||(6065514-6065614)
chr2 (25-120)||(18540658-18540753)
chr2 (25-177)||(27905622-27905774)
chr2 (22-125)||(16457751-16457854)
chr2 (83-213)||(39761774-39761904)
chr2 (24-151)||(7501378-7501505)
chr2 (25-198)||(37484403-37484576)
chr2 (23-127)||(22315192-22315296)
chr2 (25-125)||(37255988-37256088)
chr2 (25-127)||(12365534-12365636)
chr2 (137-211)||(29781528-29781602)
chr2 (24-120)||(37254842-37254938)
chr2 (85-150)||(20907131-20907196)
[»] scaffold0231 (1 HSPs)
scaffold0231 (25-213)||(10948-11136)
[»] scaffold0070 (1 HSPs)
scaffold0070 (25-213)||(12721-12909)
[»] chr5 (27 HSPs)
chr5 (25-213)||(27194687-27194875)
chr5 (25-213)||(36745782-36745970)
chr5 (24-205)||(8761017-8761198)
chr5 (25-213)||(40143904-40144092)
chr5 (41-208)||(14635361-14635528)
chr5 (41-213)||(3752470-3752642)
chr5 (25-213)||(38040623-38040811)
chr5 (24-213)||(35758034-35758213)
chr5 (90-204)||(26166134-26166248)
chr5 (77-213)||(29293358-29293494)
chr5 (25-212)||(6273128-6273315)
chr5 (27-127)||(13956932-13957032)
chr5 (24-127)||(29823256-29823359)
chr5 (79-213)||(39051850-39051984)
chr5 (25-192)||(18942249-18942416)
chr5 (22-125)||(32383891-32383994)
chr5 (23-125)||(35456505-35456607)
chr5 (25-125)||(6459707-6459807)
chr5 (25-192)||(17644142-17644309)
chr5 (25-191)||(14351875-14352041)
chr5 (48-127)||(43581683-43581762)
chr5 (24-127)||(23015032-23015135)
chr5 (25-86)||(389696-389757)
chr5 (149-213)||(389628-389692)
chr5 (23-126)||(33112208-33112311)
chr5 (24-102)||(17421302-17421380)
chr5 (50-120)||(38892686-38892756)
[»] scaffold0036 (1 HSPs)
scaffold0036 (25-213)||(51909-52097)
[»] chr4 (29 HSPs)
chr4 (25-213)||(23611452-23611640)
chr4 (25-198)||(11792384-11792557)
chr4 (24-205)||(25232594-25232775)
chr4 (25-213)||(1936422-1936610)
chr4 (77-213)||(55497505-55497641)
chr4 (78-212)||(7648075-7648209)
chr4 (25-213)||(12704571-12704759)
chr4 (25-213)||(55675420-55675608)
chr4 (24-125)||(4414414-4414515)
chr4 (25-198)||(8260965-8261138)
chr4 (25-198)||(8274382-8274555)
chr4 (25-200)||(28359603-28359778)
chr4 (25-127)||(8132791-8132893)
chr4 (25-208)||(44352087-44352270)
chr4 (25-125)||(54822047-54822147)
chr4 (25-127)||(24394073-24394175)
chr4 (22-174)||(24776120-24776272)
chr4 (22-126)||(19916433-19916537)
chr4 (63-125)||(38465206-38465268)
chr4 (17-117)||(25510479-25510579)
chr4 (25-125)||(26203680-26203780)
chr4 (25-120)||(32988247-32988342)
chr4 (25-127)||(6354971-6355073)
chr4 (25-200)||(29695360-29695535)
chr4 (25-127)||(38519287-38519389)
chr4 (25-120)||(2859419-2859514)
chr4 (64-125)||(18707490-18707551)
chr4 (48-156)||(2039105-2039213)
chr4 (70-122)||(34856052-34856104)
[»] scaffold0242 (1 HSPs)
scaffold0242 (25-198)||(17782-17955)
[»] scaffold0116 (1 HSPs)
scaffold0116 (24-127)||(7838-7941)
[»] scaffold0043 (1 HSPs)
scaffold0043 (25-200)||(64345-64520)
[»] scaffold0712 (1 HSPs)
scaffold0712 (25-211)||(4845-5030)
[»] scaffold0709 (1 HSPs)
scaffold0709 (25-211)||(4865-5050)
[»] scaffold0131 (1 HSPs)
scaffold0131 (67-127)||(7874-7934)


Alignment Details
Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 42063461 - 42063650
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42063461 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 42063560  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42063561 aaccggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 42063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 19726816 - 19726628
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19726816 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 19726717  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19726716 atcggaaccactcagatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 19726628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 40485656 - 40485468
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40485656 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 40485557  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40485556 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 40485468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 41726461 - 41726273
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41726461 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 41726362  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41726361 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 41726273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 30360455 - 30360643
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||| ||||| | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  30360455 catagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattgttcgaaccgcatgactga 30360554  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30360555 atcggaaccactcggatgacttggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 30360643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 3655857 - 3656045
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||||||||| ||| |||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| |    
T  3655857 catagttttaaaattcggctcggtcatcgactcggcggggatactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactaa 3655956  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3655957 atcggaaccactcggatgactcggttagataactcggttcttagattaaatttatatagttatttaaccggattaactcggattgaatc 3656045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 14910094 - 14910283
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| || ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||     
T  14910094 gcatagttttaaaactcggctcggtcatcgactcggcgggagtactggatcaatgggtcaatgatcgaaccactgagtcattggtcgaaccgcatgacta 14910193  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14910194 aatcggaaccactcgaatgactcggttagataactcgatccttagattaaatttatattgttatttaaccggattaactcggattgaatc 14910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 13487252 - 13487065
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||| ||||| |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  13487252 catagttttaaaattcggctcggtcatcgaatcggc-ggggtactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 13487154  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13487153 atcggaaccacgcggatgactcggttagataactcggtccttagattatatttatatagttatttaaccggattaactcggattgaatc 13487065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 31008638 - 31008450
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | || ||| ||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| |||    
T  31008638 catagttttaaaattcggttcggtcatcgactcggcgggggtactgagtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgattga 31008539  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  31008538 atcggaaccactcggatgactcggttagataactcagtccttagattaaatttatatagttatttaaccggattaactcgtgttgaatc 31008450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 36658514 - 36658695
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||||||        |||||||| ||||||||||||||||||||||||||||||||||    
T  36658514 gcatagttttaaaactcggctcggtcatcgactcggtgggggtactggg--------tcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 36658605  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36658606 aatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 36658695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 5970054 - 5969918
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  5970054 tgggtcaatggtcgaaccattgagtcattggttgaaccgcatgactgaatcggaaccactcggatgactcggttagataactcggtccttagattaaatt 5969955  T
Q  177 tatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||||||| |||||||||||||||||||||||||    
T  5969954 tatatagttatataaccggattaactcggattgaatc 5969918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 205
Target Start/End: Complemental strand, 44056604 - 44056425
Alignment:
Q  26 atagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||  ||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  44056604 atagttttaaaactcagctcgatcatcgactcggcaggggtactgaatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgtatgactgaa 44056505  T
Q  126 cctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    || || | ||||||||||||| ||||||||| |||||| | ||||||||||||||||| ||||||||| |||||| ||||    
T  44056504 ccggatcaactcggatgactcagttagataactcggtcttgagattaaatttatatagctatttaaccagattaaatcgg 44056425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 18656727 - 18656555
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||        | |||||||||||||||||||||||||||||||||||    
T  18656727 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 18656636  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    ||| || | ||||||||||||||||||||||| |||||| | ||||||||||||||||| ||| |||||||||||| ||||    
T  18656635 accggatcaactcggatgactcggttagataactcggtcgtgagattaaatttatatagctatctaaccggattaaatcgg 18656555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 36833903 - 36834067
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||| ||||||||||||||||    
T  36833903 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggtcaatggtcgaaccactgaatcattgatcgaaccgcatgactg 36834002  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatt 188  Q
    |||| || | ||||| ||||||| ||||||||| ||| || | ||||||||||||||||| ||||    
T  36834003 aaccggatcaactcgaatgactcagttagataactcgatcttgagattaaatttatatagctatt 36834067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 39375166 - 39375302
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||| | ||||||||||    
T  39375166 tgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggatcaactcggatgactcggttagataactcggtcttgagattaaatt 39375265  T
Q  177 tatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||| |||||||||||||||| ||||||| ||||    
T  39375266 tatatagctatttaaccggattaaatcggatttaatc 39375302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 27679313 - 27679187
Alignment:
Q  79 ggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaattta 178  Q
    |||||||||| |||||||||| | |||||||||| |||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  27679313 ggtcaatggtcgaaccactgaattattggtcgaatcgcatgactgaatcggaaccactcggatgactcggttagataactcgatccttagattaaattta 27679214  T
Q  179 tatagttatttaaccggattaactcgg 205  Q
    |||||||||||||||||||||||||||    
T  27679213 tatagttatttaaccggattaactcgg 27679187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 4455450 - 4455278
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||||||  |||||||||||| |||||||||||||| |||        | |||||||||||||||||||||||||||||||||||    
T  4455450 catagttttaaaacttggctcggccatcgactcggcaggggtactgggtcactgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 4455359  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    ||| || | ||||||||||||| ||||||||| |||||  | |||||||||| |||||| ||| |||||||||||| ||||    
T  4455358 accggatcaactcggatgactcagttagataactcggtattgagattaaattcatatagctatctaaccggattaaatcgg 4455278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 12639461 - 12639292
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||||  || ||||||   ||| ||||  |||| | ||||||||||||||||| |||||||||||| ||||||||||||| |    
T  12639461 catagttttaaaattcggctcgaaaattgactcgagagggatactaagtcactcggtcaatggttgaaccattgagtcattggttgaaccgcatgactta 12639362  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccg 194  Q
    ||| || | | | |||||||||| ||||||||||||||  | ||||||||||||||||| ||||||||||    
T  12639361 accagatcaatttggatgactcgattagataattcggttttgagattaaatttatataggtatttaaccg 12639292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 8015025 - 8014924
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| |||| |||||||| |||||||| ||||| ||| |||||||| |||||| |||||||||||||||||||||| ||||    
T  8015025 gcatagttttaaaactcggctcggtcattgactcggcgggggtactaggtcactggatcaatggtcgaaccagtgagtcattggtcgaaccgcataactg 8014926  T
Q  124 aa 125  Q
    ||    
T  8014925 aa 8014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 39024465 - 39024562
Alignment:
Q  97 tgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccg 194  Q
    ||||||||||||||||||||||||||||||| || | | |||||||||| |||||||||| |||||| | ||||||||||||||||| ||||||||||    
T  39024465 tgagtcattggtcgaaccgcatgactgaaccggatcaattcggatgacttggttagataactcggtcttgagattaaatttatatagctatttaaccg 39024562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 28761768 - 28761684
Alignment:
Q  41 ggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||| ||||||||||||| |||||||||||| | |||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  28761768 ggctcggtcatcgactcggcaggggtactgggttattgggtcaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 28761684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 32493289 - 32493186
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| |||||||||||||  ||||| ||||||| || || |||||| |||||||||  |||||||| ||||||||||||||    
T  32493289 gcatagttttaaaactcggctcggtcatcgactcggcatgggtattgggtcagtgagttaatggtcgaaccactggatcattggttgaaccgcatgactg 32493190  T
Q  124 aacc 127  Q
    ||||    
T  32493189 aacc 32493186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 6545699 - 6545785
Alignment:
Q  41 ggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    |||||| | ||| ||||||| |||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||| ||||||||    
T  6545699 ggctcggttatcaactcggcgggggtactgggtcactgggtcaatggtcgaaccagcgagtcattggtcgaaccgcataactgaacc 6545785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 29867728 - 29867866
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||| ||  ||| ||| |||   || |||||||||| ||||||| ||||||||||| ||||||| |||| |||||||||||||||    
T  29867728 catagttttaaaactcggcccggacattgacacggtgaggttactgggtcattgggtcattggttgaaccagtgagtcactggttgaaccgcatgactga 29867827  T
Q  125 acctgaaccactcggatgactcggttagataattcggtc 163  Q
    ||| ||   | ||||||||||||||   |||||||||||    
T  29867828 accggattaaatcggatgactcggtcgtataattcggtc 29867866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 597234 - 597335
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||  ||||||||||||  |||| ||||| ||| || || |||||| |||||||||||||||| || ||||||| |||||||    
T  597234 catagttttaaaattcggctcagtcatcgactcggtaggggcactggatcattgagttaatggtcgaaccactgagtcatt-gttgaaccgcgtgactga 597332  T
Q  125 acc 127  Q
    |||    
T  597333 acc 597335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 20821899 - 20821797
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||| |  ||||||||||||  || ||||| |||| ||||| |||||| ||||||||||||||   || ||||||||| |||||    
T  20821899 catagttttaaaacttggcttggccatcgactcggcaaggatactgagtcactgggttaatggtcgaaccactgagtcacctgttgaaccgcataactga 20821800  T
Q  125 acc 127  Q
    |||    
T  20821799 acc 20821797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 26403727 - 26403637
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccg 115  Q
    |||| |||||||||| |||| | |||||||||||   ||||||||| |||| || || ||||||||||||||||||||| |||| ||||||    
T  26403727 cataattttaaaactcggcttggtcatcgactcgataggggtactgtgtcattgagttaatggttgaaccactgagtcactggttgaaccg 26403637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 11031030 - 11031125
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||||| ||  || ||||| ||||||  ||| |||||||||| |||||||||||| |||||   | ||||||||| |||||||||||    
T  11031030 catagttttaaaactcggaccggtcatcaactcggtggggatactgggtcactgggtcaatggtcgaaccgtcgggtcattggttgaaccgcatga 11031125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 31893268 - 31893207
Alignment:
Q  66 tactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    ||||||||||||| ||||  |||  ||||||||||||| |||| ||||||||||||||||||    
T  31893268 tactgggtcaatgagtcatcggtcaaaccactgagtcactggttgaaccgcatgactgaacc 31893207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 40337560 - 40337656
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||||| |   ||  |||||||||||   || || ||| ||| ||||||| |||| |||||||| ||||||||||||||||||||||    
T  40337560 gcatagttttaaaactcgaaccggccatcgactcggtgaggatagtggatcactgggtcattggtcgaaccactaagtcattggtcgaaccgcatga 40337656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 36823545 - 36823421
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||  || |||| |||||||   || |||||||||| || || | ||||||||||| || |||| |||| |||||||||||  ||    
T  36823545 catagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagttattggttgaaccattgggtcactggttgaaccgcatgatgga 36823446  T
Q  125 acctgaaccactcggatgactcggt 149  Q
    ||| ||   | ||||||||||||||    
T  36823445 accggattaaatcggatgactcggt 36823421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 44606035 - 44605847
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44606035 catagttttaaaattcggctcggtcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 44605936  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44605935 accggaaccactcggatgactcggtttgataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 44605847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 24 - 213
Target Start/End: Complemental strand, 36099792 - 36099603
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36099792 gcatagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 36099693  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36099692 aatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 36099603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 11734345 - 11734157
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11734345 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 11734246  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11734245 atcggaaccactcggataactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 11734157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 36858133 - 36858321
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36858133 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 36858232  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36858233 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatacagttatttaaccggattaactcggattgaatc 36858321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 29983234 - 29983423
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| || ||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29983234 gcatagttttaaaactcggttcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 29983333  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29983334 aatcggaaccactcagatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 29983423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 16217109 - 16216925
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| |||||||||| ||  ||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  16217109 gcatagttttaaaactcggctcggtcatcgactcagcatgggtattgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccacatgactg 16217010  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggatt 208  Q
    |||| || | ||||||||||||||||||||||| || ||| | |||||||||||||||||||||||||||||||||| |||||||    
T  16217009 aaccggatcaactcggatgactcggttagataactcagtcttgagattaaatttatatagttatttaaccggattaaatcggatt 16216925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 47423452 - 47423633
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| | ||||| ||||| |||||||||||        |||||||| ||||||||||||||||||||||||||||||||||    
T  47423452 gcatagttttaaaactcggctcggttatcgattcggcgggggtactggg--------tcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 47423543  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47423544 aatcggaaccactcagatgattcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 47423633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 213
Target Start/End: Original strand, 10198308 - 10198495
Alignment:
Q  26 atagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||||||||||| |||||| ||||||||||||| |||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10198308 atagttttaaaactcggctcggtcatcgactcggcaggggtattggatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 10198407  T
Q  126 cctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || || | ||||||||||||||||||||||| ||| || | ||||||||||||||||| |||||||| ||||||| ||||||| ||||    
T  10198408 ccggatcaactcggatgactcggttagataactcgatcttgagattaaatttatatagctatttaactggattaaatcggatttaatc 10198495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 24096823 - 24096635
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| || ||| ||||||| ||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  24096823 catagttttaaaactcggttcggtcatcgattcggcaggggtactgggtcactggatcaatggtcgaaccactgagtcattggtcgaaccgcatgtctga 24096724  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| || | |||||| |||||||||||||||| ||| || | ||||||||||||||||  |||||||||||||||| ||||||| ||||    
T  24096723 accagatcaactcgggtgactcggttagataactcgatcttgagattaaatttatataactatttaaccggattaaatcggatttaatc 24096635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 33628360 - 33628189
Alignment:
Q  27 tagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaac 126  Q
    ||||||||||||| ||||||  ||| |||||||| ||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| |||    
T  33628360 tagttttaaaactcggctcggacattgactcggcaggggtactgagtcactgggtcaatggttgaaccattgggtcattggtcgaaccgcatgactaaac 33628261  T
Q  127 ctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    | || | ||||||||||||||||| ||||| |||||| | ||||||||||||||||| ||||||||||||||    
T  33628260 cggatcaactcggatgactcggttggataactcggtcttgagattaaatttatatagctatttaaccggatt 33628189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 20131456 - 20131268
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |  |||  ||| || ||||| ||| || || |||| ||||||||||||| || || || ||||||| |||| |||||||||| |    
T  20131456 catagttttaaaactcgattcggacattgattcggcagggttattgagtcactgggtcaatggttaaatcattgggtcattgatcgatccgcatgactaa 20131357  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| || | ||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  20131356 accggatcaactcggatgactcagttagataattcggtcttaagattaaatttatatagctatttaaccggattaaatcggattgaatc 20131268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 16198814 - 16198626
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| ||||||  |||||||||||  | |||| ||||||| |||||| ||| | ||||||||| |||| |||| |||||||||| |    
T  16198814 atgcatagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgatg-tcgaaccactgggtcactggttgaaccgcatggc 16198716  T
Q  122 tgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    |||| | || | | |||||||||||||||||||||||||||  |||||||||||||  |||||||||||| |  ||||| ||||||||||    
T  16198715 tgaaacggatcaaatcggatgactcggttagataattcggtgtttagattaaatttgcatagttatttaatcatattaaatcggattgaa 16198626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 45269553 - 45269453
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| | |||||||||||| |||||||||||| |||||| |||||||||||||||||||||| |||||    
T  45269553 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcactgggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 45269454  T
Q  125 a 125  Q
    |    
T  45269453 a 45269453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 46170641 - 46170828
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||||||||| |||  ||||||||| ||||| |||||| |||||||||||||| |||||||||||||||| |||    
T  46170641 catagttttaaaattcggctcggtcatcgactcggcagggacactgggtcattgggttaatggtcgaaccactgagtcaatggtcgaaccgcatgaatga 46170740  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaat 212  Q
    ||| || | |  || || |||||||||||| | |||| | | ||||||||||| ||||  |||| |||| |||||  |||||||||||    
T  46170741 accggatcaaaccgaataactcggttagatgactcggccttaagattaaatttttatatgtattgaaccagattagatcggattgaat 46170828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 9822519 - 9822621
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||||||||||| ||||| |||||| ||||||| || ||||||||| |||||| |||||||||||||||||||||| |||||    
T  9822519 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 9822618  T
Q  125 acc 127  Q
    |||    
T  9822619 acc 9822621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 10724444 - 10724546
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||||||||||| ||||| |||||| ||||||| || ||||||||| |||||| |||||||||||||||||||||| |||||    
T  10724444 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 10724543  T
Q  125 acc 127  Q
    |||    
T  10724544 acc 10724546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 14802063 - 14801973
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccg 115  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  14802063 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaaccg 14801973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 15249055 - 15248965
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccg 115  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  15249055 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaaccg 15248965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 14801974 - 14801907
Alignment:
Q  146 cggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  14801974 cggttagataactcggtccttagattaaatgtatatagttatttatccggattaactcggattgaatc 14801907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 15248966 - 15248899
Alignment:
Q  146 cggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  15248966 cggttagataactcggtccttagattaaatgtatatagttatttatccggattaactcggattgaatc 15248899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 31813488 - 31813674
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| | |||| ||||||||||||| |||||||||| ||||||||| |||||| |||||||||||||| |||| |||  |||||| |||    
T  31813488 catagttttaaaactcgactcggtcatcgactcggcaggggtactggttcaatgggttaatggtcgaaccactgagtcagtggttgaattgcatgattga 31813587  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    | |  |   |  || || |||||||||||| || ||||| | || |||||||| ||||| |||||||||  ||||| | ||||||||    
T  31813588 atcgaattaaaccgaataactcggttagatgatccggtcttaaggttaaatttttataggtatttaaccatattaaattggattgaa 31813674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 34192007 - 34191909
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    |||||||||||||||| |||||| | |||||||| || |||||||||| ||| |||||  ||||| ||||||||||||||||||| |||||||||||||    
T  34192007 gcatagttttaaaactcggctcggtgatcgactctgcaggggtactggatcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgact 34191909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 1582154 - 1582255
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| |||||||||| || || | |||||||||||| ||||||||| |||||  |||||||||| | ||||||||||||||    
T  1582154 gcatagttttaaaactcggctcggtcatcgactcagcaggtgcactgggtcaatgagtcaatggtcgaaccgttgagtcattgattgaaccgcatgactg 1582253  T
Q  124 aa 125  Q
    ||    
T  1582254 aa 1582255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 5418899 - 5418987
Alignment:
Q  27 tagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccg 115  Q
    ||||||||||||| |||||| ||||||||||||| | |||||||||| ||||||| |||||| |||||||||||||| |||| ||||||    
T  5418899 tagttttaaaactcggctcggtcatcgactcggcagaggtactgggttaatgggttaatggtcgaaccactgagtcactggttgaaccg 5418987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 10992819 - 10992719
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||||||  | |||||||||| ||||||||||||||||| || |||||| |||||||| ||||| |||| |||| ||||||||||    
T  10992819 catagttttaaaactcggctcggccgtcgactcggcaggggtactgggtcaatgagttaatggtcgaaccactaagtcactggttgaactgcatgactga 10992720  T
Q  125 a 125  Q
    |    
T  10992719 a 10992719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 34259377 - 34259277
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| || ||||||||||  ||||| | |||||||| || |||||| |||||||||||||| |||| |||||||||||||||    
T  34259377 catagttttaaaactcggctcggtcgtcgactcggcatgggtattaggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactga 34259278  T
Q  125 a 125  Q
    |    
T  34259277 a 34259277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 30801677 - 30801772
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||||| |||||||||||||| ||||  | |||| ||||||| ||| ||| ||||||||||||||||||   |||||||||||||||    
T  30801677 catagttttaaaactcggctcgatcatcgattcgggagaggtattgggtcattggatcattggttgaaccactgagtcgcaggtcgaaccgcatga 30801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 25069344 - 25069400
Alignment:
Q  71 ggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    ||||||||  ||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  25069344 ggtcaatgaatcattggtcgaaccactgagtcattggttgaaccgcatgactgaacc 25069400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 31958737 - 31958642
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||| | || ||| | |||||||||||   ||| ||||| || ||||||| |||| |||||| ||||||| ||||||||||||||||    
T  31958737 catagttttaaaaatcggatcggtgatcgactcggctaaggttctgggccactgggtcattggtcgaaccattgagtcactggtcgaaccgcatga 31958642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 33610648 - 33610690
Alignment:
Q  83 aatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  33610648 aatggtcgaaccactgagtcattggttgaaccgcatgactgaa 33610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 45498883 - 45498933
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||||||||    
T  45498883 tgggtcaatggtcgaaccattgagtcattgatcgaaccgaatgactgaacc 45498933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 29679384 - 29679288
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||| | ||  || | || |||||||||  |||||||  ||| ||||||| ||||  |||||||||||| |||||||||||||||||    
T  29679384 gcatagttttaaaaatcggaccggtgattgactcggccaaggtactgaatcactgggtcattggtcaaaccactgagtcgttggtcgaaccgcatga 29679288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 46004236 - 46004176
Alignment:
Q  67 actgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    ||||||||| ||||||| ||||| ||||||||  |||||||| |||| |||||||||||||    
T  46004236 actgggtcactgggtcactggttcaaccactggatcattggttgaactgcatgactgaacc 46004176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 17833666 - 17833767
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | ||  || |||||||||||   |||||||||| ||| | ||| |||| | ||||||||||||| ||||| || ||||||||||||    
T  17833666 catagttttaaaattcggtacggtcatcgactcgataggggtactgg-tcattaggttaatgatcgaaccactgagtcgttggttgagccgcatgactga 17833764  T
Q  125 acc 127  Q
    |||    
T  17833765 acc 17833767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 8420032 - 8419975
Alignment:
Q  63 gggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||| ||||||| ||||||| |||| |||||| || |||| ||||||||||||||||    
T  8420032 gggtattgggtcactgggtcattggtcgaaccattgggtcactggtcgaaccgcatga 8419975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 16560917 - 16561014
Alignment:
Q  23 tgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||||||| |   || |||| |||||||   || |||||||||| || |||| ||||||||||| || |||| |||| |||||||||||    
T  16560917 tgcatagttttaaaactcgaaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatga 16561014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 16604745 - 16604648
Alignment:
Q  23 tgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||||||| |   || |||| |||||||   || |||||||||| || |||| ||||||||||| || |||| |||| |||||||||||    
T  16604745 tgcatagttttaaaactcgaaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatga 16604648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 26491978 - 26492066
Alignment:
Q  26 atagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgca 117  Q
    |||||||||||||| || |||||| ||| |||||  ||| ||||||||||   | ||| ||||||||||| ||||||| |||| ||||||||    
T  26491978 atagttttaaaactcggatcgatcgtcggctcggtagggttactgggtca---gttcattggttgaaccattgagtcaatggttgaaccgca 26492066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 39238102 - 39238057
Alignment:
Q  68 ctgggtcaatgggtcaatggttgaaccactgagtcattggtcgaac 113  Q
    |||||||||||||||| ||||||||||||||  |||||||| ||||    
T  39238102 ctgggtcaatgggtcactggttgaaccactggatcattggttgaac 39238057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 20623194 - 20623246
Alignment:
Q  70 gggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    |||||| || ||||||||| ||| ||||| ||||||||| |||||||||||||    
T  20623194 gggtcactgagtcaatggtcgaatcactgggtcattggttgaaccgcatgact 20623246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 28234796 - 28234987
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28234796 atgcatagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgac 28234895  T
Q  122 tgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28234896 tgaatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 28234987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 42866278 - 42866466
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42866278 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 42866377  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42866378 accggaatcactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaattcggattgaatc 42866466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 3355399 - 3355588
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||| | |||||| ||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  3355399 gcatagttttaaaattcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaatcactgagtcattggtcgaaccgcatgactg 3355498  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3355499 aaccggaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatataaccggattaactcggattgaatc 3355588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 44257769 - 44257958
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  44257769 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactg 44257868  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44257869 aatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcggattgaatc 44257958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 24984248 - 24984083
Alignment:
Q  48 tcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcg 147  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24984248 tcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaactagtgagtcattggtcgaaccgcatgactgaaccggaaccactcggatgactcg 24984149  T
Q  148 gttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24984148 gttagataactcggtccttagattaaatttatatagttatataaccggattaactcggattgaatc 24984083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 46535369 - 46535189
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||        | |||||||||||||||||||||||||||||||||||    
T  46535369 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 46535278  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46535277 atcggaaccattcggatgactcggttagataactcggtccttagattaaatttatatagttattaaaccggattaactcggattgaatc 46535189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 210
Target Start/End: Original strand, 12792670 - 12792847
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||||||| || | |||||||||||        |||||||| ||||||| |||||||||||||||||||||||||||    
T  12792670 catagttttaaaactcggctcggtcatcgacccgacgggggtactggg--------tcaatggtcgaaccaccgagtcattggtcgaaccgcatgactga 12792761  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattga 210  Q
    | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12792762 atcagaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattga 12792847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 48303297 - 48303118
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||| ||||||| ||||||||||||||||| || |||||||||| |||||||        | |||||||||||||||| || |||||||||||||||    
T  48303297 catagttctaaaactcggctcgatcatcgactcagc-ggggtactggatcaatgg--------tcgaaccactgagtcattagtggaaccgcatgactga 48303207  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48303206 atcagaatcactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcgaattgaatc 48303118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 50655447 - 50655628
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||||||| |||| ||| ||  |||||| ||| | ||||||||||| || |||||||| |||||||| |||||| ||||||||||    
T  50655447 catagttttaaaactcggctcgaacatcaacttggt-ggggtattggattaatgggtcaatagtcgaaccactaagtcattgatcgaacggcatgactga 50655545  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggat 207  Q
    | | ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50655546 atcggaaccactcggatgacttggttagataactcggtccttagattaaatttatatagttatttaaccggattaaatcggat 50655628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 9293642 - 9293810
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||                    ||||||||||||||||    
T  9293642 catagttttaaaactcggctcgatcatcgactcgacgggggtactgggtcaatgggtcaatggt--------------------cgaaccgcatgactga 9293721  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9293722 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcggattgaatc 9293810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 213
Target Start/End: Complemental strand, 1846999 - 1846829
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||                   |||||||    
T  1846999 gcatagttttaaaactcggctcgatcatcgactcggcggaggtactgggttaatgggttaatggtcgaaccact-------------------atgactg 1846919  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || |  ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1846918 aatcgaaaccactcgaatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 1846829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 4225131 - 4224995
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |||||||| || | ||||||||||||||||||||||| ||| || | ||||||||||    
T  4225131 tgggtcaatggtcgaaccactgagtcattggttgaaccgcataactgaaccggatcaactcggatgactcggttagataactcgttcttgagattaaatt 4225032  T
Q  177 tatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||| |||||||||||||||| ||| ||| ||||    
T  4225031 tatatagctatttaaccggattaaatcgaatttaatc 4224995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 37034982 - 37034810
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  37034982 gcatagttttaaaactcggctcgatcatcgactcggcatgggtactgggttactgggtcaatggtcgaaccactgggtcattggtcgaaccgcatgactg 37034883  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    |||| || |          |||||||||||||| |||||| | |||||||| |||||||| ||||||| || ||||| ||||    
T  37034882 aaccggatc---------aactcggttagataactcggtcttgagattaaacttatatagctatttaatcgaattaaatcgg 37034810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 205
Target Start/End: Complemental strand, 5384825 - 5384697
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| |||| | || || ||||||||||||||||||||||||| || | ||||||||| ||| ||||||||| |||||| | ||||||||||    
T  5384825 tgggtcaatggtcgaactattgggttattggtcgaaccgcatgactgaaccggatcaactcggatggctcagttagataactcggtcttgagattaaatt 5384726  T
Q  177 tatatagttatttaaccggattaactcgg 205  Q
    ||||||| |||||||||||||||| ||||    
T  5384725 tatatagctatttaaccggattaaatcgg 5384697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 33690158 - 33690259
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||| ||||| ||||||||||| ||    
T  33690158 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgattg 33690257  T
Q  124 aa 125  Q
    ||    
T  33690258 aa 33690259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 3252226 - 3252328
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||  | |||||||||||| || || ||||||||||||||||||||| |||| |||||||||||||||    
T  3252226 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcactggttgaaccgcatgactga 3252325  T
Q  125 acc 127  Q
    |||    
T  3252326 acc 3252328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 7156333 - 7156148
Alignment:
Q  26 atagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||||||||| | ||||||  ||| |||||||  ||||| ||||||| |||| |||||||| |||||| ||  |||| ||| ||||||||||||||||    
T  7156333 atagttttaaaattcggctcgtccattgactcgggaggggtgctgggtcgatgg-tcaatggtcgaaccattggatcatcggttgaaccgcatgactgaa 7156235  T
Q  126 cctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaat 212  Q
    || || | ||| | |||| ||||| |||||| |||||| | ||||||||||||||||| ||||||| |||||||| || ||||||||    
T  7156234 ccagatcaacttgaatgattcggtaagataactcggtcttgagattaaatttatatagatatttaagcggattaaatctgattgaat 7156148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 45193302 - 45193206
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    ||||||||||||||| ||||||||||||||||||||  |||| |||||||| ||||||| |||| |||||||||| ||||| |||||||||||||||    
T  45193302 catagttttaaaactcggctcgatcatcgactcggcaagggtgctgggtcactgggtcattggtcgaaccactgaatcattagtcgaaccgcatgac 45193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 3014274 - 3014089
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| | |||| | ||||||||||| |||||||||||||| ||| | |||||| ||||||||||||||||||| ||||| |||||||||    
T  3014274 catagttttaaaactcgtctcgtt-atcgactcggcaggggtactgggtcactggattaatggtcgaaccactgagtcattggttgaaccacatgactga 3014176  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    ||| ||   |  || || ||||||||| || |  ||||| | ||||||||||| ||||| ||||||||   ||||| ||||||||||    
T  3014175 accggattaaaccgaataactcggttaaatgacccggtcttaagattaaatttttataggtatttaactatattaaatcggattgaa 3014089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 44410712 - 44410898
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| || ||| |||||||||||||  ||||||||||||| ||||| |||||| |||||||||||||| |||| ||||||||||||| |    
T  44410712 catagttttaaaactcggttcggtcatcgactcggcaagggtactgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactaa 44410811  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    | | ||   |  || || |||||| ||||| | |||||  | ||||||||| | ||||| || |||||| |||||| ||||||||||    
T  44410812 atcagattaaaccgaataactcggctagatgactcggttttaagattaaatctttataggtaattaacccgattaaatcggattgaa 44410898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 32364121 - 32364289
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||||||| | |||||| ||||||  ||||| |||||| ||||||||| |||| |||| |||||||||||||||    
T  32364121 catagttttaaaattcggctcggtcatcgactcgacaggggtattgggtcgctgggttaatggtcgaaccactgggtcactggttgaaccgcatgactga 32364220  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaacc 193  Q
    | | ||   |  ||||| |||||||||||| | |||||| | ||||||||||| ||||  |||||||||    
T  32364221 atcggattaaaccggataactcggttagatgactcggtcttaagattaaatttttataactatttaacc 32364289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 18032286 - 18032387
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| || ||||||||||  ||||||||| |||||| || |||||| |||||||||||||| |||| |||| |||||||||    
T  18032286 gcatagttttaaaactcggctcggtcgtcgactcggcatgggtactggatcaatgagttaatggtcgaaccactgagtcactggttgaactgcatgactg 18032385  T
Q  124 aa 125  Q
    ||    
T  18032386 aa 18032387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 962598 - 962496
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||||||||||||   |||||| |||||||  || |||||| |||||||||||||| |||| ||||| |||||||||    
T  962598 catagttttaaaactcggctcggtcatcgactcggcataggtactaggtcaataagttaatggtcgaaccactgagtcactggttgaaccacatgactga 962499  T
Q  125 acc 127  Q
    |||    
T  962498 acc 962496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20725983 - 20726083
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||| |  || ||||||||||||| || |||||| |||||||||| ||| |||| |||| ||||||||||    
T  20725983 catagttttaaaactcggctcggtcatcgactcgacatggatactgggtcaatgagttaatggtcgaaccactgactcactggttgaactgcatgactga 20726082  T
Q  125 a 125  Q
    |    
T  20726083 a 20726083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 3794153 - 3794247
Alignment:
Q  26 atagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||||||||||| |||||  |||||||||||       |||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  3794153 atagttttaaaactcggctcagtcatcgactcg-------tactgggtcattgggttaatggtcgaaccactgagtcattggttgaaccgcatgactgaa 3794245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 16914593 - 16914407
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||||||| ||||||||||   | |  | ||||||| |||||| ||||| ||||||||| |||| |  | |||||||||||||||    
T  16914593 catagttttaaaactcggctcgaccatcgactcgatagagacattgggtcactgggtcgatggtcgaaccactgggtcactaattgaaccgcatgactga 16914494  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    | | || | | ||||||||||| ||||||||| |||||  ||| |||||||||  || | ||||||| |  ||||| ||||||||||    
T  16914493 atcggatcaaatcggatgactcagttagataactcggtgtttaaattaaatttgcatgggtatttaatcatattaaatcggattgaa 16914407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 19554297 - 19554196
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||||| ||||||||||   || |||||| ||| || |||| || | |||||||||| ||||||||||||||| ||||||||    
T  19554297 catagttttaaaactcggctcgatgatcgactcggtgaggttactggatcactgagtcattgatcgaaccactgaatcattggtcgaaccgtatgactga 19554198  T
Q  125 ac 126  Q
    ||    
T  19554197 ac 19554196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 49241642 - 49241747
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||| ||| | ||| |||||| ||| ||||| |||||| ||||||| ||||| ||||| |||||||||| ||||    
T  49241642 catagttttaaaattcggctcggtcatcgattcgacagggatactggatcattgggttaatggtcgaaccaccgagtcgttggttgaaccgcatggctga 49241741  T
Q  125 acctga 130  Q
    ||||||    
T  49241742 acctga 49241747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 46545422 - 46545482
Alignment:
Q  67 actgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    |||||||||||| |||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  46545422 actgggtcaatgagtcattggtcgaaccactgagtcattggttgaaccgcatgactgaacc 46545482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 20117947 - 20117850
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    |||||||||||||   |||||| ||||| ||||||  ||| ||||| |||| |||||||||||| |||||| ||||| |||||| |||||||||||||    
T  20117947 catagttttaaaaactggctcggtcatcaactcggtagggatactgagtcattgggtcaatggtcgaaccattgagttattggttgaaccgcatgact 20117850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 50359066 - 50358969
Alignment:
Q  28 agttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||||||| | || ||||| ||||||||||   || |||| ||||| || |||| |||| |||||||||| |||||||||||||||||||||||||    
T  50359066 agttttaaaattcggttcgatgatcgactcggtgaggttactaggtcactgagtcattggtcgaaccactgaatcattggtcgaaccgcatgactgaa 50358969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 27415295 - 27415233
Alignment:
Q  63 gggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    ||||||||||||| ||| ||||||||||||||||||  |||||||| |||||||| |||||||    
T  27415295 gggtactgggtcactggttcaatggttgaaccactggatcattggttgaaccgcacgactgaa 27415233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 31986189 - 31986096
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgca 117  Q
    |||||||||||||||| ||  || || |||||||||   |||| |||||||| ||| ||| |||||||||||||| ||||||||| ||||||||    
T  31986189 gcatagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgca 31986096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 24638701 - 24638800
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    ||||||||||||||||  ||||| |||||||||||||  ||||| ||||||| || || |||||| ||   |||| |||| |||| ||||||||||||||    
T  24638701 gcatagttttaaaactcagctcggtcatcgactcggcatgggtagtgggtcagtgagttaatggtcga---actgggtcactggttgaaccgcatgactg 24638797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 51727056 - 51727158
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | | | |||  |||||||||| |  |||||||| ||| || |||| || | |||||| |||||||||||| |||||||||||||||    
T  51727056 catagttttaaaaatcgacccgaaaatcgactcggtcaaggtactggatcactgagtcattgatcgaaccattgagtcattggttgaaccgcatgactga 51727155  T
Q  125 acc 127  Q
    |||    
T  51727156 acc 51727158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 28281976 - 28282081
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||  || |||| |||||||   || |||||||||| || |||| ||||||||||| || |||| |||| |||||||||||  ||    
T  28281976 catagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgataga 28282075  T
Q  125 acctga 130  Q
    ||||||    
T  28282076 acctga 28282081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 41983875 - 41983794
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattg 106  Q
    ||||||||||||||| |||||| ||||| |||| ||  |||||||| |||| || || |||||| |||||| ||||||||||    
T  41983875 catagttttaaaactcggctcggtcatcaactcagcatgggtactgagtcagtgagttaatggtcgaaccattgagtcattg 41983794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 45774760 - 45774821
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatg 86  Q
    ||||||||||||||| || ||||||||||||||||| || ||||||| ||| ||||| ||||    
T  45774760 catagttttaaaactcggttcgatcatcgactcggcaggtgtactggatcattgggttaatg 45774821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 52585217 - 52585250
Alignment:
Q  94 cactgagtcattggtcgaaccgcatgactgaacc 127  Q
    ||||||||||||||||||||||||||||||||||    
T  52585217 cactgagtcattggtcgaaccgcatgactgaacc 52585250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 11191471 - 11191411
Alignment:
Q  67 actgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    ||||||||  || |||| |||| ||||||||||||||||||| ||||| ||||||||||||    
T  11191471 actgggtcgctgagtcattggtcgaaccactgagtcattggttgaaccacatgactgaacc 11191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 45484175 - 45484222
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgg 71  Q
    |||||||||||||||| |||| | ||||||||||||| ||||||||||    
T  45484175 gcatagttttaaaacttggcttggtcatcgactcggcaggggtactgg 45484222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 8255962 - 8256032
Alignment:
Q  79 ggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggt 149  Q
    |||||||| ||||| || |||||||||||| |||||| ||| ||||||| || | |||||||| |||||||    
T  8255962 ggtcaatgattgaaacattgagtcattggttgaaccgtatggctgaaccagatcaactcggataactcggt 8256032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 34143556 - 34143610
Alignment:
Q  158 tcggtccttagattaaatttatatagttatttaaccggattaactcggattgaat 212  Q
    |||||| | ||||||||||||||||| ||||||| |||||||| || ||||||||    
T  34143556 tcggtcttgagattaaatttatatagatatttaagcggattaaatctgattgaat 34143610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 4332001 - 4331964
Alignment:
Q  85 tggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  4332001 tggttgaaccactgggtcattggttgaaccgcatgact 4331964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 43064807 - 43064706
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |   || | ||||||||||   | ||| ||||||| |||||||||||| ||||||||| || | |||||| ||||||||| ||    
T  43064807 gcatagttttaaaactcgaaccggtgatcgactcggtaagtgtattgggtcattgggtcaatggtcgaaccactgggttactggtcgtaccgcatgaatg 43064708  T
Q  124 aa 125  Q
    ||    
T  43064707 aa 43064706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 50323329 - 50323425
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||||| || ||| |  |||||||||   || |||||||||| ||||| | |||| |||||| |  |||| ||||||||||||||||    
T  50323329 gcatagttttaaaactcggttcggttgtcgactcggtaaggatactgggtcactgggttattggtcgaaccattaggtcactggtcgaaccgcatga 50323425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 30465189 - 30465001
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30465189 catagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 30465090  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30465089 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 30465001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 29025258 - 29025442
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    ||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29025258 gcatagttttaaaactcagctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggttgaaccagtgagtcattggtcgaaccgcatgactg 29025357  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggatt 208  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29025358 aaccggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatataaccggattaactcggatt 29025442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 39850695 - 39850883
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  39850695 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgattga 39850794  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39850795 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 39850883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 23241965 - 23241777
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23241965 catagttttaaaattcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 23241866  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23241865 atcggaaccactcggatgactcggttagataactcggtccttagaataaatttatatagttatttaaccggattaactcggattgaatc 23241777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 33634882 - 33635071
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  |    
T  33634882 gcatagttttaaaactcggttcgatcatcgactcggcgggggtactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgatag 33634981  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33634982 aatcggaacaactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccagattaactcggattgaatc 33635071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 2849367 - 2849180
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||  ||| |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||    
T  2849367 catagttttaaaactcggctcggtcatcgactcggt-gggatactgggtcaatgggttaatggtcgaatcattgagtcattggtcgaaccgcatgactga 2849269  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||    
T  2849268 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaattggattaactcttattgaatc 2849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 26725596 - 26725732
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  26725596 tgggtcaatggtcgaaccactgagttattggtcgaaccgcatgactgaatcagaaccactcggatgactcggttagataactcggtccttagattaaatt 26725695  T
Q  177 tatatagttatttaaccggattaactcggattgaatc 213  Q
    |||||||||||||||||||||||||||||||||||||    
T  26725696 tatatagttatttaaccggattaactcggattgaatc 26725732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 55258187 - 55258012
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55258187 catagttttaaaactcggctcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 55258088  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55258087 atcggaaccactcggatgact-------------cggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 55258012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 44832455 - 44832586
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  44832455 tgggtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactgaaccggaaccactcggataactcggttagataactcggtccttagattaaatt 44832554  T
Q  177 tatatagttatttaaccggattaactcggatt 208  Q
    ||||||||||||||||||||||||||||||||    
T  44832555 tatatagttatttaaccggattaactcggatt 44832586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 37599976 - 37599801
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  37599976 catagttttaaaactcggctcggtcatcgacttggcgggggtactgggtcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 37599877  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | |  |||||||||||||||             || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37599876 atcgtaaccactcggatgac-------------tcagtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 37599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 213
Target Start/End: Complemental strand, 10259300 - 10259129
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||                    |||||||||||||    
T  10259300 atgcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggttaatggt--------------------cgaaccgcatgac 10259221  T
Q  122 tgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10259220 tgaatcggaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 10259129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 33987322 - 33987149
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| | || | |||| |||||||  ||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  33987322 catagttttaaaactcgacttggtcattgactcggtggggttactggatcaatgagtcaatggttgaatcactgagtcattggtcgaaccgcatgactga 33987223  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    | |  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  33987222 atcgaaaccactcgaatgactcggttagataactcggttcttagattaaatttatatagttatttaatcggatt 33987149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 11335709 - 11335577
Alignment:
Q  81 tcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttata 180  Q
    |||| ||| |||||||||||||||||  ||||||||||||||||| | ||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  11335709 tcaacggtcgaaccactgagtcattgaacgaaccgcatgactgaatcagaatcactcggatgattcggttagataactcggtccttagattaaatttata 11335610  T
Q  181 tagttatttaaccggattaactcggattgaatc 213  Q
    |  ||||||||||||||||||||||||||||||    
T  11335609 ttcttatttaaccggattaactcggattgaatc 11335577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 52404445 - 52404273
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| | |||||||||||||||||   ||||||||||||||||| ||||       ||||||||||||||||||||||||||||| | |    
T  52404445 catagttttaaaactcgcctcgatcatcgactcggtatgggtactgggtcaatgg-tcaa-------accactgagtcattggtcgaaccgcatgattaa 52404354  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    ||| || | ||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||| || ||||| ||||    
T  52404353 accggatcaactcggatgactcggttagataactcggtcttgagattaaatttatatagctatttaatcgtattaaatcgg 52404273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 45158515 - 45158648
Alignment:
Q  80 gtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttat 179  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || | |||| |||| ||||||||||||| |||||| | |||||||||||||    
T  45158515 gtcaatggttgaaccaccgagtcattggtcgaaccgcatgactgaaccggatcaactcagatggctcggttagataactcggtcttgagattaaatttat 45158614  T
Q  180 atagttatttaaccggattaactcggattgaatc 213  Q
    |||  ||||||| ||||| || ||||||| ||||    
T  45158615 ataactatttaatcggataaaatcggatttaatc 45158648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 11676259 - 11676175
Alignment:
Q  129 gaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11676259 gaaccactcggatgactcgtttagataactcggtccttaaattaaatttatatagttatttaaccggattaactcggattgaatc 11676175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 53351170 - 53351273
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||||||| ||||| ||||||||||||||    
T  53351170 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattaggttaatggttgaaccactgagtcgttggttgaaccgcatgactg 53351269  T
Q  124 aacc 127  Q
    ||||    
T  53351270 aacc 53351273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 29727737 - 29727923
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||| ||||| |||||| ||||||| ||||| ||||||||||||||||||||| | || |||||||||||||||    
T  29727737 catagttttaaaactcggctcggtcatcgattcggcaggggtattgggtcattgggttaatggttgaaccactgagtcactagttgaaccgcatgactga 29727836  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    | | ||   |  ||||| |||| ||||||| | |||||| | ||||||||||| ||||| ||||||||  |||||| ||| ||||||    
T  29727837 atcggattaaaccggataactcagttagatgactcggtcttaagattaaatttttatagctatttaactagattaaatcgaattgaa 29727923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 51537292 - 51537106
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| ||||||| ||||| |||||| ||||||||| |||| |||| |||||||||| ||||    
T  51537292 catagttttaaaactcggctcggtcatcgactcggcaggggtattgggtcactgggttaatggtcgaaccactgggtcactggttgaaccgcatgtctga 51537193  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    | | ||   |  ||||| |||||||||||| | |||||| | ||||||||||| ||||  ||||||||| |||||| ||| ||||||    
T  51537192 atcggattaaaccggataactcggttagatgactcggtcttaagattaaatttttataactatttaaccagattaaatcgaattgaa 51537106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 212
Target Start/End: Original strand, 45096287 - 45096476
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggt-actgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    |||||||||||||||| ||||||  ||| |||||||  ||||| |||||||| ||||||||||||| |||||| ||  |||| ||| ||||| |||||||    
T  45096287 gcatagttttaaaactcggctcggccattgactcgggaggggttactgggtcgatgggtcaatggtcgaaccattggatcatcggttgaaccacatgact 45096386  T
Q  123 gaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaat 212  Q
     |||| || | ||||||||||||| || |||||| |||||| | ||||||||||||||||| ||||||| ||| |||| || ||||||||    
T  45096387 taaccggatcaactcggatgactcagtaagataaatcggtcttgagattaaatttatatagatatttaagcgggttaaatctgattgaat 45096476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 5123809 - 5123927
Alignment:
Q  80 gtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttat 179  Q
    |||| ||| ||||||| |||||||||||| ||||||||||| |||||  || | ||||||||||||||||||||||| ||| || | |||||||||||||    
T  5123809 gtcactgggtgaaccattgagtcattggttgaaccgcatgaatgaactggatcaactcggatgactcggttagataactcgctcttgagattaaatttat 5123908  T
Q  180 atagttatttaaccggatt 198  Q
    |||| |||||||| |||||    
T  5123909 ataggtatttaactggatt 5123927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 42907769 - 42907871
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |  |||||||||| |||| ||||||||| | ||| |||||| ||||||||||||||||||| |||||||||||||||    
T  42907769 catagttttaaaactcggctcggttgtcgactcggcaggggcactgggtcattaggttaatggtcgaaccactgagtcattggttgaaccgcatgactga 42907868  T
Q  125 acc 127  Q
    |||    
T  42907869 acc 42907871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 35054812 - 35054710
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||||||||||||  ||||||||||||| || || |||||| |||||| || |||| |||| |||||||||||||||    
T  35054812 catagttttaaaactcggctcggtcatcgactcggcatgggtactgggtcagtgagttaatggtcgaaccattgggtcactggttgaaccgcatgactga 35054713  T
Q  125 acc 127  Q
    |||    
T  35054712 acc 35054710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 42217265 - 42217164
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||    |||||||||||| || || |||||| |||||||||||||| |||| ||||||||||||||    
T  42217265 gcatagttttaaaactcggctcggtcatcgactcggtaaaggtactgggtcattgagttaatggtcgaaccactgagtcactggttgaaccgcatgactg 42217166  T
Q  124 aa 125  Q
    ||    
T  42217165 aa 42217164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 11676333 - 11676262
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccact 97  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  11676333 catagttttaaaacttggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaaccact 11676262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 11018704 - 11018806
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||||||||| ||| |||||  |  ||||| |||||||||||||||||||||| ||||    
T  11018704 gcatagttttaaaactcggctcggtcatcgactcggt-ggggtactgggtcactggatcaataatcaaaccagtgagtcattggtcgaaccgcataactg 11018802  T
Q  124 aacc 127  Q
    ||||    
T  11018803 aacc 11018806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 11574993 - 11575180
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| | ||||||||||||||||||   |||||||||||| ||  || ||||| ||||||  | ||||||||| ||||||| ||||||    
T  11574993 gcatagttttaaaactcgactcgatcatcgactcggcataggtactgggtcattgaatcgatggtcgaaccatcgggtcattggttgaaccgcgtgactg 11575092  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    || | || | |  ||||||||||||| | ||||   |||  ||||||||||||| ||||| |||||||   |||||| ||||||||||    
T  11575093 aatcggatcaaaccggatgactcggtaaaataaccaggtgtttagattaaatttgtataggtatttaatgagattaaatcggattgaa 11575180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 11412594 - 11412513
Alignment:
Q  26 atagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattgg 107  Q
    |||||||||||||| |||||| |||||||||||||  ||||| ||||||| ||||||| |||| ||||||||||||||||||    
T  11412594 atagttttaaaactcggctcggtcatcgactcggcaagggtattgggtcactgggtcattggtcgaaccactgagtcattgg 11412513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 15100603 - 15100704
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| ||||||||||||||||||    || || ||||||| ||||| |||||| |||||||||||||| || | ||||||||||||||    
T  15100603 gcatagttttaaaactcggctcgatcatcgactcgataaggatattgggtcattgggttaatggtcgaaccactgagtcactgattgaaccgcatgactg 15100702  T
Q  124 aa 125  Q
    ||    
T  15100703 aa 15100704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 27002522 - 27002686
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||||||  ||| ||||||||  |||||||| |||| ||||||||||||||||| | ||  |||||| |||||| | |||||| |    
T  27002522 catagttttaaaactcggctcggacattgactcggcaagggtactgagtcactgggtcaatggttgaactattggatcattgatcgaactgtatgactaa 27002621  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    ||| || |          |||||||| ||||| |||||| | ||||||||||||||||| ||||||||||||||    
T  27002622 accggatc---------aactcggttggataactcggtcttgagattaaatttatatagctatttaaccggatt 27002686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 41462460 - 41462271
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| |||||| ||||||||||| |   |||||||||||| || ||| ||||| ||||||  | |||| | || ||||||||||||    
T  41462460 atgcatagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccatcgggtcacttgttgaaccgcatgac 41462361  T
Q  122 tgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    |||| ||||   |  ||||||| ||||| |||||| |||||  ||| ||||||||| ||||  ||||||  |  ||||| ||||||||||    
T  41462360 tgaatctgattaaaccggatgattcggtaagataactcggtgtttaaattaaatttgtataagtatttattcaaattaaatcggattgaa 41462271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 6101998 - 6101923
Alignment:
Q  50 atcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    ||||||||||   |||||||||||||||| |||| |||| |||||| ||||||| |||||||||||||||||||||    
T  6101998 atcgactcggtgagggtactgggtcaatgagtcattggtcgaaccattgagtcactggtcgaaccgcatgactgaa 6101923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 51229613 - 51229487
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||  || | |||||||||| | |||||||||||||  |||||| ||||| || |||||  ||| ||||||||||||||||||||    
T  51229613 catagttttaaaactcggaccggtgatcgactcggtcagggtactgggtcacagggtcattggttcaaacactggatcactggtcgaaccgcatgactga 51229514  T
Q  125 acctgaaccactcggatgactcggtta 151  Q
    | | ||   | ||||||||||||||||    
T  51229513 atcggattgaatcggatgactcggtta 51229487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 50007358 - 50007211
Alignment:
Q  64 ggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtc 163  Q
    |||||||||||| || ||| ||||| ||||||  | || | |||| |||||||||||||||| | || | |  ||||||||||||| |||||| |||||     
T  50007358 ggtactgggtcactgagtcgatggtcgaaccatcgggttactggttgaaccgcatgactgaatcggatcaaaccggatgactcggtaagataactcggtg 50007259  T
Q  164 cttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
     ||| ||||||||| || |  ||||||| | |||||| ||||||||||    
T  50007258 tttaaattaaatttgtacaagtatttaatcagattaaatcggattgaa 50007211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 39750215 - 39750162
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctga 130  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||| ||| ||||    
T  39750215 tgggtcattggttgaaccactgagtcattggtcgatccgtatgacagaatctga 39750162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 44201107 - 44201285
Alignment:
Q  23 tgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    ||||||||||||||||| |||||| ||||||||||||  | || ||||   || || ||| ||||| ||||||  | |||||| || ||||||||||||     
T  44201107 tgcatagttttaaaactcggctcggtcatcgactcggtagaggcactgaagcactgagtcgatggtcgaaccatcgggtcatttgttgaaccgcatgaca 44201206  T
Q  123 gaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    |||          |||||||||||||||||||||   |||  ||||||||||||| ||||| ||||||| |  ||||| ||||||||||    
T  44201207 gaa----------tcggatgactcggttagataacctggtgtttagattaaatttgtataggtatttaatcaaattaaatcggattgaa 44201285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 45104215 - 45104119
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||||| ||  || | ||||| ||||   | ||||||||||| |||||||||||| |||||||||  ||| ||||||||| ||||||    
T  45104215 gcatagttttaaaactcggaccggtgatcgaatcggtaagagtactgggtcactgggtcaatggtcgaaccactggatcactggtcgaactgcatga 45104119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 53724061 - 53724133
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccact 97  Q
    ||||||||||||||| |||| | |||||| |||| ||  ||||||||||||||| || |||||| ||||||||    
T  53724061 catagttttaaaactcggcttggtcatcgcctcgaccacggtactgggtcaatgagttaatggtcgaaccact 53724133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 6739532 - 6739472
Alignment:
Q  67 actgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    |||||||||  | |||||||||| ||||| || ||||||||| |||||||||||| |||||    
T  6739532 actgggtcaccgagtcaatggttcaaccattgggtcattggttgaaccgcatgacagaacc 6739472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 41459712 - 41459676
Alignment:
Q  90 gaaccactgagtcattggtcgaaccgcatgactgaac 126  Q
    |||||| || |||||||||||||||||||||||||||    
T  41459712 gaaccattgggtcattggtcgaaccgcatgactgaac 41459676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 24068304 - 24068113
Alignment:
Q  21 catgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24068304 catgcatagttttaaaactcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatga 24068205  T
Q  121 ctgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaat 212  Q
    ||||| | |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24068204 ctgaatcggaaccactcggatgactcggttagataactcggtgcttagattaaatttatatagttatttaaccggattaactcggattgaat 24068113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 21289550 - 21289738
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||| | ||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  21289550 gcatagttttcatactcggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactg 21289648  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21289649 aaccggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatataaccggattaactcggattgaatc 21289738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 30269592 - 30269766
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||    
T  30269592 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagttaatggtcgaaccactgagtcgttggtcgaaccgcatgactg 30269691  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30269692 aatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggatt 30269766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 22351347 - 22351167
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||        | ||||||||||||||||||||||||||||||||| |    
T  22351347 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactta 22351256  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22351255 atcagaaccactcggatgactcggttagataactcagtccttagattaaatttatatagttatttaaccggaataactcggattgaatc 22351167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 213
Target Start/End: Complemental strand, 31513474 - 31513289
Alignment:
Q  27 tagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaac 126  Q
    ||||||||||||| ||||||  ||| |||||||  ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| |||    
T  31513474 tagttttaaaactcggctcggacattgactcggaaggggtactgagtcaatgggtcaatggttgaaccattgggtcattggtcgaaccgcatgactaaac 31513375  T
Q  127 ctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | || | ||||||||||||||||| ||||  |||||| | |||||||||||| |||| ||||||||| |||||| ||||||||||||    
T  31513374 cggatcaactcggatgactcggttggatatctcggtcttgagattaaatttaaatagctatttaacc-gattaaatcggattgaatc 31513289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 205
Target Start/End: Original strand, 13630202 - 13630375
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcatt-ggtcgaaccgcatgact 122  Q
    ||||| |||||||||| |||||| ||||||||||||| ||||||||| ||||||||        | |||||||| ||||||| |||||||| ||||||||    
T  13630202 gcatatttttaaaactcggctcggtcatcgactcggc-ggggtactgagtcaatgg--------tcgaaccacttagtcatttggtcgaactgcatgact 13630292  T
Q  123 gaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    || || |||| ||||| ||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  13630293 gatccggaactactcgaatgactcggttagataactcggtctttagattaaatttatataattatttaaccggattaactcgg 13630375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 8464281 - 8464450
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| |||||  |||||| |  ||||||||||| || || |||||| |||||||| | ||||||||||||||||||||||||    
T  8464281 catagttttaaaattcggctcggtcatcagctcggcagatgtactgggtcactgagttaatggtcgaaccactaaatcattggtcgaaccgcatgactga 8464380  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccg 194  Q
    ||| || | | ||||||||||| ||||||||| |||||| | ||||||||||||||||| ||||||||||    
T  8464381 accagatcaattcggatgactctgttagataactcggtcttgagattaaatttatatagctatttaaccg 8464450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 23595690 - 23595786
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||||| |||||| | ||||||||||| |||||||||||||| |||||  ||||| ||||||||||||||||||| |||||||||||    
T  23595690 gcatagttttaaaactcggctcggtgatcgactcggcaggggtactgggtcactgggttgatggtcgaaccactgagtcattggttgaaccgcatga 23595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 6817290 - 6817383
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcat 118  Q
    ||||||||||||||| |||||| ||||||||||||   ||||||||||||| ||||| |||||| |||||||||||||| |||| |||||||||    
T  6817290 catagttttaaaactcggctcggtcatcgactcggtaagggtactgggtcattgggttaatggtcgaaccactgagtcactggttgaaccgcat 6817383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 29419864 - 29419771
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||       ||||||||||||| |||| ||||||||||||||    
T  29419864 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcaat-ggtca-------aaccactgagtcactggttgaaccgcatgactg 29419773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 21528944 - 21528818
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||  || | |||||||||| | |||||||||||||  |||||| ||||| || ||||| |||| ||||||||||||||||||||    
T  21528944 catagttttaaaactcggaccggtgatcgactcggtcagggtactgggtcacagggtcattggttcaatcactgggtcactggtcgaaccgcatgactga 21528845  T
Q  125 acctgaaccactcggatgactcggtta 151  Q
    | | ||   | ||||||||||||||||    
T  21528844 atcggattgaatcggatgactcggtta 21528818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 30426318 - 30426418
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| |||||||||||| | ||||||||| |||||  || |||||| |||||||| ||||| |||| ||||||||||| |||    
T  30426318 catagttttaaaattcggctcggtcatcgactcggacagggtactggatcaataagttaatggtcgaaccactaagtcactggttgaaccgcatgattga 30426417  T
Q  125 a 125  Q
    |    
T  30426418 a 30426418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 31504741 - 31504663
Alignment:
Q  134 actcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||||||| |||||||| ||||  |||||| | |||||||||||| |||| ||||||||| |||||| ||||||||||||    
T  31504741 actcggattactcggttggatatctcggtcttgagattaaatttaaatagctatttaacc-gattaaatcggattgaatc 31504663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 11465359 - 11465421
Alignment:
Q  63 gggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||||||||||||| |||| |||| |||||| ||  ||| |||||||||||||||||||||    
T  11465359 gggtactgggtcaatgagtcattggtcgaaccattggatcactggtcgaaccgcatgactgaa 11465421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 34780025 - 34779971
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgg 79  Q
    ||||||||||||||| |||||  |||| |||||||| ||||||||||||||||||    
T  34780025 catagttttaaaactcggctctgtcattgactcggcgggggtactgggtcaatgg 34779971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 13177838 - 13177894
Alignment:
Q  64 ggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||| ||||||| ||||||| |||| ||| ||||| |||| ||||||||||||||||    
T  13177838 ggtagtgggtcactgggtcattggtcgaatcactgtgtcactggtcgaaccgcatga 13177894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 8e-82; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 17513019 - 17513208
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||     
T  17513019 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaactgcatgacta 17513118  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17513119 aatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 17513208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 24128753 - 24128941
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  24128753 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 24128852  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24128853 atcggaaccactcggatgactcggttagataactaggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 24128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 23293289 - 23293101
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||| ||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  23293289 catagttttaaaactcggctcggtcattgactcggcgagggtactgggtcaatgggtgaatggtcgaaccactgagtcattggtcgaaccgcatgactga 23293190  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  23293189 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttacatagttatttaaccggattaactcggattaaatc 23293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 7153437 - 7153624
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||| | |||||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  7153437 catagttttaaaactcggctcggtcatcgactcgacgggggtactgggtcaatgatt-aatggtcgaaccactgagtcattggtcgaaccgcatgactga 7153535  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7153536 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcggattgaatc 7153624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 48 - 213
Target Start/End: Original strand, 39678327 - 39678492
Alignment:
Q  48 tcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcg 147  Q
    ||||||||||||| | ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  39678327 tcatcgactcggcagaggtactgggtcaatgagtcaatggtcgaatcactgagtcattggtcgaaccgcatgactgaatcggaaccactcggatgactcg 39678426  T
Q  148 gttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39678427 gttagataactcggtccttagattaaatttatatagttatttaactggattaactcggattgaatc 39678492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 37315037 - 37314857
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||        | |||||||||||||||||||||||||||||||||||    
T  37315037 catagttttaaaactcggctcggtcatcgattcggcgggggtactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 37314946  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37314945 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 37314857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 35305399 - 35305211
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  35305399 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 35305300  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| || | ||||||||||||||||||||||| |||||| | ||||||||||||||||| ||| |||||| ||||| ||||||| ||||    
T  35305299 accggatcaactcggatgactcggttagataactcggtcttgagattaaatttatatagctatctaaccgaattaaatcggatttaatc 35305211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 39062024 - 39061844
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||| | |||||| ||||||||||||| |||||| |||||||||||        | |||||||||||||||||||||||||||||||||||    
T  39062024 catagttttaaaattcggctcggtcatcgactcggcgggggtattgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 39061933  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39061932 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 39061844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 24 - 213
Target Start/End: Complemental strand, 29523987 - 29523806
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||        | ||||||||||||||||||||||||||||||||||    
T  29523987 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactg 29523896  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  29523895 aatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcaaattgaatc 29523806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 26 - 213
Target Start/End: Original strand, 31900414 - 31900593
Alignment:
Q  26 atagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||||||||| | |||||| ||||||| ||||| |||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||    
T  31900414 atagttttaaaattcggctcggtcatcgattcggcgggggtactggg--------tcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 31900505  T
Q  126 cctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
     | |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31900506 tcggaaccactcggatgactcggttagataacttggtccttagattaaatttatatagttatttaatcggattaactcggattgaatc 31900593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 77 - 205
Target Start/End: Original strand, 14885343 - 14885471
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||    
T  14885343 tgggtcaatggtcgaaccactgagtcattagtcgaaccgcatgactgaaccggaaccactcggatgactcggttaaataactcagtccttagattaaatt 14885442  T
Q  177 tatatagttatttaaccggattaactcgg 205  Q
    |||||||||||||||||||||||||||||    
T  14885443 tatatagttatttaaccggattaactcgg 14885471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 3988705 - 3988829
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||| |||||||| ||| |||||||||| |||||||||||| ||| || || ||||||||| |||||||||||||||    
T  3988705 catagttttaaaactcggctcggtcattgactcggcagggatactgggtcattgggtcaatggtcgaatcattgggtcattggttgaaccgcatgactga 3988804  T
Q  125 acctgaaccactcggatgactcggt 149  Q
    ||| || | ||||||||||||||||    
T  3988805 accggatcaactcggatgactcggt 3988829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 19881939 - 19882041
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||| |||||||| |||||||||||||| | |||||||||| |||||| |||||||||||||||||||||| |||||    
T  19881939 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcacttggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 19882038  T
Q  125 acc 127  Q
    |||    
T  19882039 acc 19882041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 32878818 - 32878717
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| || |||||||||| |||||||||||||  |||||||||||| |||||| |||||||||||||||||||||| ||||    
T  32878818 gcatagttttaaaactcggctcggtcgtcgactcggcgggggtactgggtccctgggtcaatggtcgaaccaatgagtcattggtcgaaccgcataactg 32878719  T
Q  124 aa 125  Q
    ||    
T  32878718 aa 32878717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 16106819 - 16106633
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| |||||||||||||  | ||| ||||||| ||||| |||||| |||||||||||||| |||| ||||||||||||||    
T  16106819 gcatagttttaaaactcggctcggtcatcgactcggcaagagtattgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactg 16106720  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattga 210  Q
    || | ||   |  | ||| |||||||||||| | ||| || | ||||||||||| ||||| ||||||||  |||||| ||| |||||    
T  16106719 aatcggattaaaccagataactcggttagatgactcgatcttaagattaaatttttatagctatttaactagattaaatcgaattga 16106633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 10810662 - 10810561
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| ||||||||||||||||||||   |||||||||||||||||| |||| | ||||||||| ||||| ||| ||||||||||||||    
T  10810662 gcatagttttaaaactcggctcgatcatcgactcggcaacggtactgggtcaatgggttaatgatcgaaccactgggtcatcggttgaaccgcatgactg 10810563  T
Q  124 aa 125  Q
    ||    
T  10810562 aa 10810561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 21800786 - 21800619
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||| |||||| |||||||||||| ||| ||||| |||| |||| |||| ||||||||||    
T  21800786 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaatcactgggtcactggttgaactgcatgactga 21800687  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaac 192  Q
    | | ||   | |||||| ||||||||| || | |||||| | ||||||||| | ||||| ||||||||    
T  21800686 atcggattaaatcggataactcggttaaatgactcggtcttaagattaaatatttataggtatttaac 21800619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 23250965 - 23251069
Alignment:
Q  21 catgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||||||||  ||||  ||||||||||| | |||||||||||||| ||| |||||||| ||||||  ||||||||||||||||||||| |    
T  23250965 catgcatagttttaaaactcagctcagtcatcgactcgacgggggtactgggtcactggatcaatggtcgaaccagcgagtcattggtcgaaccgcataa 23251064  T
Q  121 ctgaa 125  Q
    |||||    
T  23251065 ctgaa 23251069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 6065614 - 6065514
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||  || ||||||| ||||| ||||||||| |||| ||||| |||||| ||||||||| ||||||||| |||||||||||||||    
T  6065614 catagttttaaaactcggtccggtcatcgattcggcaggggtactgagtcactgggttaatggtcgaaccactgggtcattggttgaaccgcatgactga 6065515  T
Q  125 a 125  Q
    |    
T  6065514 a 6065514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 18540658 - 18540753
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||| ||| ||||||| |||| |||||||||||||   ||||||||| |||||    
T  18540658 catagttttaaaactcggctcgatcatcgactcggaaggggtactggatcattgggtcactggtcgaaccactgagtcgcaggtcgaaccacatga 18540753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 27905622 - 27905774
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||  |||| |  |||||||||||  | || | ||||||| |||||  ||||| ||||||||| ||||| ||| |||||| ||||||||    
T  27905622 catagttttaaaacacggcttggccatcgactcggtagaggcattgggtcactgggtagatggtcgaaccactgggtcatcggttgaaccgtatgactga 27905721  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaattt 177  Q
    | | || | | ||||||||||||||||||||| |||||  |||||||||||||    
T  27905722 atcagatcaaatcggatgactcggttagataactcggtgtttagattaaattt 27905774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 16457854 - 16457751
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| |||||| ||||||| |||||  ||||| |||||||||| || |||||| |||||||||| ||| |||| ||| ||||| ||    
T  16457854 atgcatagttttaaaactcggctcggtcatcgattcggcatgggtattgggtcaatgagttaatggtggaaccactgaatcactggttgaatcgcataac 16457755  T
Q  122 tgaa 125  Q
    ||||    
T  16457754 tgaa 16457751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 39761904 - 39761774
Alignment:
Q  83 aatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatata 182  Q
    |||||| |||||||||||||||||||||||  |||| ||  ||   || | | |||||| |||||||||||||| |||| | | |||||| |||||| ||    
T  39761904 aatggtcgaaccactgagtcattggtcgaaatgcattacaaaattggatcaattcggataactcggttagataactcggccttgagattatatttatgta 39761805  T
Q  183 gttatttaaccggattaactcggattgaatc 213  Q
    | |||||||||||||||| ||||||||||||    
T  39761804 gctatttaaccggattaaatcggattgaatc 39761774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 7501378 - 7501505
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| ||  || | |||||||||| | |||||||||||||  |||||| ||||| || |||||  ||| |||||||||||||||||||    
T  7501378 gcatagttttaaaactcggaccggtgatcgactcggtcagggtactgggtcacagggtcattggttcaaacactggatcactggtcgaaccgcatgactg 7501477  T
Q  124 aacctgaaccactcggatgactcggtta 151  Q
    || | ||   | ||||||||||||||||    
T  7501478 aatcggattgaatcggatgactcggtta 7501505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 37484403 - 37484576
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |  |||||||||   || |||||||||| ||||| | || | |||||| ||||||| ||||||||||||||||  ||    
T  37484403 catagttttaaaactcggctcggttgtcgactcggtaaggatactgggtcattgggttattgatcgaaccattgagtcactggtcgaaccgcatgatgga 37484502  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    ||  ||   |  |||||||||||||||||| | ||||||  || ||||||||| ||| | |||| |||||||||    
T  37484503 actggattaaaccggatgactcggttagatgactcggtctctatattaaatttgtattggtattaaaccggatt 37484576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 22315296 - 22315192
Alignment:
Q  23 tgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    ||||||||||||||||| | |||| |||| |||||||| || ||||| |||||  | ||||||||| |||||||| ||||| |||| ||||| ||||| |    
T  22315296 tgcatagttttaaaactcgtctcggtcattgactcggcaggtgtactaggtcaccgagtcaatggtcgaaccactcagtcactggttgaaccacatgatt 22315197  T
Q  123 gaacc 127  Q
    |||||    
T  22315196 gaacc 22315192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 37256088 - 37255988
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    |||||||||||||   || ||| ||||||||||||  | || ||||| ||||||| |||||||| |||||| |||||| ||||| ||||||||||| |||    
T  37256088 catagttttaaaaaccggttcggtcatcgactcggtagaggcactggatcaatggttcaatggtcgaaccattgagtcgttggttgaaccgcatgattga 37255989  T
Q  125 a 125  Q
    |    
T  37255988 a 37255988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 12365636 - 12365534
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||  || || |||| ||||   ||||||||||||| ||| | | |||| ||||||||| |||| |||| |||||||||||||||    
T  12365636 catagttttaaaactcggaccggtcgtcgattcggttagggtactgggtcactggtttattggtcgaaccactgggtcactggttgaaccgcatgactga 12365537  T
Q  125 acc 127  Q
    |||    
T  12365536 acc 12365534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 29781528 - 29781602
Alignment:
Q  137 cggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    ||||||||||| ||| ||||||||||  ||| ||||||||| ||||| ||||||| | |||||| ||||||||||    
T  29781528 cggatgactcgattaaataattcggtgtttatattaaatttgtataggtatttaatcagattaaatcggattgaa 29781602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 37254938 - 37254842
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||||| ||  || |||| |||||||   || |||||||||| || |||| ||||||||||| || |||| |||| |||||||||||    
T  37254938 gcatagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatga 37254842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 20907131 - 20907196
Alignment:
Q  85 tggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggtt 150  Q
    |||| |||||| |||||||||||| |||||||||||||| ||  |||  | |||||||||||||||    
T  20907131 tggtcgaaccattgagtcattggtagaaccgcatgactggactggaataaatcggatgactcggtt 20907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 11136 - 10948
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  11136 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactaa 11037  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11036 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattaaatc 10948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 12721 - 12909
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12721 catagttttaaaactcgactcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 12820  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  12821 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaacttggattaaatc 12909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 7e-79; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 27194875 - 27194687
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  27194875 catagttttaaaactcggctcggtcatcgactcggctggggtactgggttaatgggtcaatagttgaaccactgtgtcattggtcgaaccacatgactga 27194776  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27194775 accggaaccactcagatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 27194687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 36745970 - 36745782
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36745970 catagttttaaaactcggctcggtcatcgattcggcgggagtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 36745871  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36745870 atcggaatcactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 36745782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 8761198 - 8761017
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| || ||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  8761198 gcatagttttaaaactcggatcggtcatcgactcggcgggggtactgggtcaataggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 8761099  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    || | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8761098 aatcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcgg 8761017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 40143904 - 40144092
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| | |  |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40143904 catagttttaaaactcggctcggtcatcgactcggcggagaaactgagtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 40144003  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40144004 atcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 40144092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 41 - 208
Target Start/End: Original strand, 14635361 - 14635528
Alignment:
Q  41 ggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcgga 140  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  14635361 ggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccggaaccactcgga 14635460  T
Q  141 tgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggatt 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14635461 tgactcggttagataactcggtccttagattaaatttatatagttatataaccggattaactcggatt 14635528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 41 - 213
Target Start/End: Original strand, 3752470 - 3752642
Alignment:
Q  41 ggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcgga 140  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  3752470 ggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaagcagtgagtcattggtcgaaccgcatgactgaaccggaaccactcgga 3752569  T
Q  141 tgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  3752570 tgactcggttagataactcggtccttagattaaatttatatagttatataaccggattaactcggatttaatc 3752642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 38040623 - 38040811
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38040623 catagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 38040722  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | | |||||||||||||||||| || |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38040723 atcggaaccactcggatgactcagtcagataactcgatccttagattaaatttatatagttatttaaccagattaactcggattgaatc 38040811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 35758034 - 35758213
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  35758034 gcatagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcagtgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 35758133  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    || | |||||          ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35758134 aatcggaacc----------ctcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 35758213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 26166248 - 26166134
Alignment:
Q  90 gaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttattt 189  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  26166248 gaaccactgagtcattggtcgaaccgcatgactgaaccagaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatta 26166149  T
Q  190 aaccggattaactcg 204  Q
    || ||||||||||||    
T  26166148 aatcggattaactcg 26166134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 29293358 - 29293494
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| |||  || | |||||||||||||| || ||||| |||||| | ||||||||||    
T  29293358 tgggtcaatggttgaaccattgggtcattggtcgaaccgcatgactaaactggatcaactcggatgactcgcttggataactcggtcttgagattaaatt 29293457  T
Q  177 tatatagttatttaaccggattaactcggattgaatc 213  Q
    ||||||| |||||||||||||||| | ||||||||||    
T  29293458 tatatagatatttaaccggattaaattggattgaatc 29293494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 6273128 - 6273315
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| |||| ||||||| | ||||| |||||| |||||||||||||| ||||||||||| ||||||||    
T  6273128 catagttttaaaactcggctcggtcatcgactcggcaggggcactgggttattgggttaatggtcgaaccactgagtcaatggtcgaaccgtatgactga 6273227  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaat 212  Q
    ||| || | |  || || |||||||||||| | |||| | | ||||||||||| ||||  |||| |||| |||||| |||||||||||    
T  6273228 accggatcaaaccgaataactcggttagatgactcggccttaagattaaatttttatatgtattgaaccagattaaatcggattgaat 6273315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 13956932 - 13957032
Alignment:
Q  27 tagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaac 126  Q
    ||||||||||||| |||||| |||||||||||||   ||||||||||||||| || |||||| |||||||||||||| |||| |||||||||||||||||    
T  13956932 tagttttaaaactcggctcggtcatcgactcggcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaac 13957031  T
Q  127 c 127  Q
    |    
T  13957032 c 13957032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 29823256 - 29823359
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||| | |||||| ||||||||||||| |||||||||||||| | |||||||||| |||||| ||| |||||| ||||||||||| ||||    
T  29823256 gcatagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcactaggtcaatggtcgaaccagtgaatcattgatcgaaccgcataactg 29823355  T
Q  124 aacc 127  Q
    ||||    
T  29823356 aacc 29823359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 39051984 - 39051850
Alignment:
Q  79 ggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaattta 178  Q
    |||||||||| |||| ||||| |||||| ||||||||||||||||||||  | | ||| | || |||||||||||||  |||||| | ||||||||||||    
T  39051984 ggtcaatggtcgaactactgaatcattgttcgaaccgcatgactgaaccatatcaacttgaataactcggttagatatctcggtcttaagattaaattta 39051885  T
Q  179 tatagttatttaaccggattaactcggattgaatc 213  Q
    ||||| |||||||| ||||||| ||||||| ||||    
T  39051884 tatagctatttaactggattaaatcggatttaatc 39051850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 192
Target Start/End: Original strand, 18942249 - 18942416
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||| |||||| |||||||||||| |||||||||  | | |||| |||||||||||||||    
T  18942249 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaaccactggatgactggttgaaccgcatgactga 18942348  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaac 192  Q
    | | ||   | |||||| |||| |||| || | |||||| | ||||||||| | ||||| ||||||||    
T  18942349 atcggattaaatcggataactcagttaaatgactcggtcttaagattaaatatttataggtatttaac 18942416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 32383994 - 32383891
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| |||||| |||||||||||   ||| |||||||||| | ||| |||| ||||||||||| ||||||||| ||||||||||||    
T  32383994 atgcatagttttaaaactcggctcggtcatcgactcgatagggatactgggtcactaggttaatgattgaaccactgtgtcattggttgaaccgcatgac 32383895  T
Q  122 tgaa 125  Q
    ||||    
T  32383894 tgaa 32383891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 35456505 - 35456607
Alignment:
Q  23 tgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    ||||||||||||||||| |||||| ||||| ||| ||  |||||||||| ||| ||| |||||||| |||||||||||||| |||| |||||||||||||    
T  35456505 tgcatagttttaaaactcggctcggtcatcaacttgggaggggtactggttcattggatcaatggtcgaaccactgagtcactggttgaaccgcatgact 35456604  T
Q  123 gaa 125  Q
    |||    
T  35456605 gaa 35456607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 6459707 - 6459807
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    |||||||||||||||  ||||| || ||||||||||  |||||||||||||||| || |||||| ||||||||| |||| |||| |||||||||||||||    
T  6459707 catagttttaaaactcagctcggtcgtcgactcggcatgggtactgggtcaatgagttaatggtcgaaccactgggtcactggttgaaccgcatgactga 6459806  T
Q  125 a 125  Q
    |    
T  6459807 a 6459807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 17644309 - 17644142
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| | |||| ||||||| ||||  ||||||  |||||| |||||||||||| |||||||||  ||| |||||||||| |||||||||    
T  17644309 catagttttaaaactcgactcggtcatcgattcggtaggggtatcgggtcactgggtcaatggtcgaaccactggatcaatggtcgaaccacatgactga 17644210  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaac 192  Q
    | | ||   | |||||| ||||||||| || | |||||| | ||||||||| | ||||| ||||||||    
T  17644209 atcggattaaatcggataactcggttaaatgactcggtcttaagattaaatatttataggtatttaac 17644142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 14352041 - 14351875
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||  |||| | ||| ||| || || |||||| |||||||||||||||| || |||||||||||||||    
T  14352041 catagttttaaaactcggctcggtcatcgactcggtaggggcattggatcagtgagttaatggtcgaaccactgagtcattagttgaaccgcatgactga 14351942  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaa 191  Q
    | | ||   |  ||||| ||||||||| || |  ||||| | ||||||||||| ||||| |||||||    
T  14351941 atcggattaaaccggataactcggttatatgacccggtcttaagattaaatttttataggtatttaa 14351875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 43581762 - 43581683
Alignment:
Q  48 tcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    ||||||||||||   | |||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  43581762 tcatcgactcggtaagagtactgagtcaatgggtcattggttgaaccactgaatcattagtcgaaccgcatgactgaacc 43581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 23015032 - 23015135
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||| | || |||  ||||||||||| |   ||||||||||| || |||| |||| |||||| || ||||||||| ||||||||||||||    
T  23015032 gcatagttttaaaaatcggatcggacatcgactcggtcaaagtactgggtcactgagtcattggtcgaaccattgggtcattggttgaaccgcatgactg 23015131  T
Q  124 aacc 127  Q
    ||||    
T  23015132 aacc 23015135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 389757 - 389696
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatg 86  Q
    ||||||||||||||| |||||| ||||||| ||||| |||||||| ||||| ||||||||||    
T  389757 catagttttaaaactcggctcggtcatcgattcggcaggggtactaggtcactgggtcaatg 389696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 389692 - 389628
Alignment:
Q  149 ttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    |||||||| | |||| | |||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  389692 ttagataacttggtcttgagattaaatttatacagttatttaaccggattaaatcggatttaatc 389628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 33112311 - 33112208
Alignment:
Q  23 tgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    ||||||||||||||||| |||||| || |||| ||||| |||| |||| || | ||| | |||| | |||| |||||||||||| | |||| ||||||||    
T  33112311 tgcatagttttaaaactcggctcggtcgtcgattcggcaggggcactgagttattggattaatgatcgaactactgagtcattgattgaactgcatgact 33112212  T
Q  123 gaac 126  Q
    ||||    
T  33112211 gaac 33112208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 17421302 - 17421380
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtc 102  Q
    |||||||||||||||| |||||| |||||||||||   |||||| ||| ||| || |||| || | |||||||||||||    
T  17421302 gcatagttttaaaactcggctcggtcatcgactcgagaggggtattggatcattgagtcattgatcgaaccactgagtc 17421380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 38892756 - 38892686
Alignment:
Q  50 atcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||   ||||||||||||| ||||||||| || ||| ||||| |||| ||||||||| ||||||    
T  38892756 atcgactcggtaagggtactgggtcactgggtcaatagtcgaatcactgggtcactggtcgaactgcatga 38892686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 51909 - 52097
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||    
T  51909 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccacagagtcattggtcaaaccgcatgactga 52008  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  52009 accggaaccactcggatgactcggttagataattcggtccttagattaaatttgtattgatatttaaccggattaactcggattgaatc 52097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 23611640 - 23611452
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| || ||| ||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23611640 catagttttaaaactcggttcggtcatcgactcggcggggatactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 23611541  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    | |  |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23611540 atcgaaaccactcggataactcggttagataactcggtccttagattaaatttatatagttatttaactggattaactcggattgaatc 23611452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 11792384 - 11792557
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  11792384 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 11792483  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    | | |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  11792484 atcggaaccactcggatgactcggttagataactcggtccttagaataaatttatatagttatttaaccggatt 11792557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 25232775 - 25232594
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25232775 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 25232676  T
Q  124 aacctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcgg 205  Q
    |||| || | ||||||||| ||||||||||||| |||||| | ||||||||||||||||| ||||||||| |||||| ||||    
T  25232675 aaccggatcaactcggatggctcggttagataactcggtcttgagattaaatttatatagatatttaaccagattaaatcgg 25232594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 1936610 - 1936422
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||  | |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1936610 catagttttaaaacccgactcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 1936511  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| || | ||||||||| ||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  1936510 accggatcaactcggatggctcggttagataactcggtcttgagattaaatttatatagctatttaaccggattaaatcggatttaatc 1936422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 55497505 - 55497641
Alignment:
Q  77 tgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaatt 176  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  55497505 tgggtcaatggtcgaaccactgagtcattgatcgaaccgcatgactgaatcggaaccactcggatgactcggttagataactcggtccttagattaaatt 55497604  T
Q  177 tatatagttatttaaccggattaactcggattgaatc 213  Q
    |||||||||||||||||||||||||||||||||||||    
T  55497605 tatatagttatttaaccggattaactcggattgaatc 55497641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 7648075 - 7648209
Alignment:
Q  78 gggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcggttagataattcggtccttagattaaattt 177  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7648075 gggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccggaaccactcggatgactcggttagataactcggtccttagattaaattt 7648174  T
Q  178 atatagttatttaaccggattaactcggattgaat 212  Q
    |||||||||| ||||||||||||||||||||||||    
T  7648175 atatagttatataaccggattaactcggattgaat 7648209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 12704759 - 12704571
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||| |||  ||||||||||||| |  ||||||||| ||||||||||||||||| ||||||||||| |||||    
T  12704759 catagttttaaaactcggctcggtcatcgactaggcatgggtactgggtcactaagtcaatggtcgaaccactgagtcattgatcgaaccgcattactga 12704660  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| || | ||||||||||||||||||||||| |||||| | ||||||||||||||||  |||||||||||||||| ||||||| ||||    
T  12704659 accggatcaactcggatgactcggttagataactcggtcttgagattaaatttatataactatttaaccggattaaatcggatttaatc 12704571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 55675420 - 55675608
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||| | |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||| |    
T  55675420 catagttttaaaactcggctcggtcatcgactcgacaggggtactgggtcaataggtcaatggtcgaatcactgagtcattggtcgaaccgcaagactaa 55675519  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatc 213  Q
    ||| ||   ||||| ||| ||||||||||||| |||||| | ||||||||||||||||| |||||||| ||||||| || |||| ||||    
T  55675520 accggattaactcgaatggctcggttagataactcggtcttgagattaaatttatatagctatttaactggattaaatcagatttaatc 55675608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 4414414 - 4414515
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||| | || ||||||||||||||    
T  4414414 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcacttgttgaaccgcatgactg 4414513  T
Q  124 aa 125  Q
    ||    
T  4414514 aa 4414515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 8261138 - 8260965
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||| |  ||| |||||||  ||||| ||| |||| ||||||||||||||||||| || |||||||||| |||| ||||||| |    
T  8261138 catagttttaaaactcggcttggacattgactcggtaggggtgctgagtcactgggtcaatggttgaaccattgggtcattggtcaaaccacatgactaa 8261039  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    ||| || | |||||||||||||| ||| |||| |||||| | ||||||||||||||||  ||||||| ||||||    
T  8261038 accggatcaactcggatgactcgattacataactcggtcttgagattaaatttatataactatttaatcggatt 8260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 8274555 - 8274382
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||| |  ||| |||||||  ||||| ||| |||| ||||||||||||||||||| || |||||||||| |||| ||||||| |    
T  8274555 catagttttaaaactcggcttggacattgactcggtaggggtgctgagtcactgggtcaatggttgaaccattgggtcattggtcaaaccacatgactaa 8274456  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    ||| || | |||||||||||||| ||| |||| |||||| | ||||||||||||||||  ||||||| ||||||    
T  8274455 accggatcaactcggatgactcgattacataactcggtcttgagattaaatttatataactatttaatcggatt 8274382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 28359778 - 28359603
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||| |||||||| | |||| ||||||| |||||||||| | |||||| ||  |||||| | |||||||||||||||    
T  28359778 catagttttaaaactcggctcggtcattgactcggcagaggtattgggtcactgggtcaatgatcgaaccattggatcattgattgaaccgcatgactga 28359679  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaa 200  Q
    | | || | |||||||||||||||||| |||  ||||||   ||||| ||||||||||| ||||||||| ||||||    
T  28359678 atcagatcaactcggatgactcggttaaatatctcggtctaaagatttaatttatataggtatttaaccagattaa 28359603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 8132791 - 8132893
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||  | |||||||||||| || || |||||||||||||||||||||||||| |||||||||||||||    
T  8132791 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcattggttgaaccgcatgactga 8132890  T
Q  125 acc 127  Q
    |||    
T  8132891 acc 8132893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 208
Target Start/End: Original strand, 44352087 - 44352270
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| || ||| |||||||||||||   |||||||||||| || ||| ||||| |||||| || |||| |||| |||||||||||||||    
T  44352087 catagttttaaaactcggttcggtcatcgactcggcataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactga 44352186  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggatt 208  Q
    | | || | |  ||||||||||||| ||||||  ||||  ||||||||||||| ||||| ||||||| | |||||| |||||||    
T  44352187 atcagatcaaaccggatgactcggtaagataacccggtgtttagattaaatttgtataggtatttaatcagattaaatcggatt 44352270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 54822047 - 54822147
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||||||| || ||||||| | |||||||||||||| |||| |||||||||||||||    
T  54822047 catagttttaaaactcggctcggtcatcgactcggcaggtgtactgggtcactgagtcaatgatcgaaccactgagtcactggttgaaccgcatgactga 54822146  T
Q  125 a 125  Q
    |    
T  54822147 a 54822147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 24394073 - 24394175
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    |||| |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| ||||| |||||||||| | ||| |||||    
T  24394073 cataattttaaaactcggctcggtcatcgactcggcgggggtactgggtcactgggtcaatggtcgaaccagtgagttattggtcgaatcacataactga 24394172  T
Q  125 acc 127  Q
    |||    
T  24394173 acc 24394175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 24776272 - 24776120
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| ||||||  |||||||||||  | |||| ||||||| |||||| ||||| |||||||||  |||||||| |||| ||||| |    
T  24776272 atgcatagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgatggtcgaaccactggatcattggttgaactgcatggc 24776173  T
Q  122 tgaacctgaaccactcggatgactcggttagataattcggtccttagattaaa 174  Q
    |||| | || | | |||||||||||||||||||||  ||||  ||||||||||    
T  24776172 tgaatcggatcaaatcggatgactcggttagataacacggtgtttagattaaa 24776120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 19916537 - 19916433
Alignment:
Q  22 atgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgac 121  Q
    |||||||||||||||||| |||||| |||||||| | || | |||||||||||| ||| | |||||| |||||||||| || ||||| ||||||||||||    
T  19916537 atgcatagttttaaaactcggctcggtcatcgacacagcagaggtactgggtcattggattaatggtcgaaccactgaatcgttggttgaaccgcatgac 19916438  T
Q  122 tgaac 126  Q
    |||||    
T  19916437 tgaac 19916433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 38465206 - 38465268
Alignment:
Q  63 gggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38465206 gggtactgagtcattgggtcattggttgaatcactgagtcattggtcgaaccgcatgactgaa 38465268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 25510479 - 25510579
Alignment:
Q  17 catccatgcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgc 116  Q
    ||||||||||||||||||||||| ||  || || |||||||||   |||| |||||||| ||| ||| |||||||||||||| ||||||||| |||||||    
T  25510479 catccatgcatagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgc 25510578  T
Q  117 a 117  Q
    |    
T  25510579 a 25510579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 26203780 - 26203680
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||||||||||||||| | | || ||||||||| || ||  ||||| ||||||  ||||||||||| |||| ||||||||||    
T  26203780 catagttttaaaactcggctcgatcatcgactcgacagaggcactgggtcactgagtggatggtcgaaccatcgagtcattggttgaactgcatgactga 26203681  T
Q  125 a 125  Q
    |    
T  26203680 a 26203680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 32988342 - 32988247
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    ||||||||||||||| ||  ||  |||||||||||   ||||| ||||||| | ||||| |||| |||||||||||||||||||||||||||||||    
T  32988342 catagttttaaaactcggaccggccatcgactcggtgagggtagtgggtcactaggtcattggtcgaaccactgagtcattggtcgaaccgcatga 32988247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 6355073 - 6354971
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| |||||||||||   | ||| ||| |||| ||||| |||||| |||||| ||||||| | || |||||||||||||||    
T  6355073 catagttttaaaactcggctcggtcatcgactcgatagaggttctgagtcactgggttaatggtcgaaccattgagtcaatagttgaaccgcatgactga 6354974  T
Q  125 acc 127  Q
    |||    
T  6354973 acc 6354971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 29695535 - 29695360
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||| |   | |||||||||| || ||| ||||| |||  | || |||| |||| |||||||||| | ||    
T  29695535 catagttttaaaactcggctcggtcatcgactcgacatagatactgggtcactgagtcgatggtcgaattattgggtcactggttgaaccgcatggccga 29695436  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaa 200  Q
    | | || | |  ||||||||||||| ||||||  ||||  ||||||||||||| ||||| ||||||| | ||||||    
T  29695435 atcagatcaaaccggatgactcggtaagataacccggtgtttagattaaatttgtataggtatttaatcagattaa 29695360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 38519287 - 38519389
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| ||||| | |||||||| | |   |||| ||||||| ||||| |||||| |||||| ||||||| |||| ||||||||||||| |    
T  38519287 catagttttaaaactcggctcaaccatcgacttgacaaaggtattgggtcactgggttaatggtcgaaccattgagtcactggttgaaccgcatgactta 38519386  T
Q  125 acc 127  Q
    |||    
T  38519387 acc 38519389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 2859419 - 2859514
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatga 120  Q
    |||||||||||||||  |  || | ||||||||||   ||||| ||||||| |||||||||||| ||||||||| |||| ||||||||| ||||||    
T  2859419 catagttttaaaactcagaccggtgatcgactcggtaagggtattgggtcactgggtcaatggtcgaaccactgggtcactggtcgaactgcatga 2859514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 18707551 - 18707490
Alignment:
Q  64 ggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 125  Q
    |||||| ||||| ||| ||||| |||||||||||| ||||||||| |||||||| |||||||    
T  18707551 ggtactaggtcactggttcaattgttgaaccactgtgtcattggttgaaccgcacgactgaa 18707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 2039105 - 2039213
Alignment:
Q  48 tcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacctgaaccactcggatgactcg 147  Q
    ||||||||||||   || || |||||||||| ||||  ||| |||||||||||||| |||| ||||| ||| |||||||| ||   | ||||||||| ||    
T  2039105 tcatcgactcggtaaggttattgggtcaatgagtcatcggtcgaaccactgagtcactggttgaacctcattactgaaccggattaaatcggatgacccg 2039204  T
Q  148 gttagataa 156  Q
    |||||||||    
T  2039205 gttagataa 2039213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 34856052 - 34856104
Alignment:
Q  70 gggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgact 122  Q
    |||||| || ||||||||| |||||||||  |||||||| |||||||||||||    
T  34856052 gggtcactgagtcaatggtcgaaccactggatcattggttgaaccgcatgact 34856104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 17955 - 17782
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    |||||||||||||||  |||||| |||  ||||||| ||||||||| |||| ||||| |||||| |||||| |||||||||||| |||||||||||||||    
T  17955 catagttttaaaactcagctcgaccattcactcggcaggggtactgagtcattgggttaatggtcgaaccattgagtcattggttgaaccgcatgactga 17856  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggatt 198  Q
    ||| || | |||||||||| ||||||| |||| ||||||   ||||| ||||||||||| ||||||||||||||    
T  17855 accagatcaactcggatgattcggttaaataactcggtctagagattcaatttatataggtatttaaccggatt 17782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 7838 - 7941
Alignment:
Q  24 gcatagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactg 123  Q
    |||||||||||||||| |||||| |||||||||||||   ||||||| |||| ||||| |||||| ||||||||||||| ||||| ||||||||||||||    
T  7838 gcatagttttaaaactcggctcggtcatcgactcggcaaaggtactgagtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgactg 7937  T
Q  124 aacc 127  Q
    ||||    
T  7938 aacc 7941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 64345 - 64520
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||| |   |||||||||||| || ||| ||||| |||||| || |||| |||| |||||||||||||||    
T  64345 catagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactga 64444  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaa 200  Q
    | | || | |  ||||||||||| | ||||||  ||||  ||| ||||||||| ||||| ||||||| | ||||||    
T  64445 atcggatcaaaccggatgactcgataagataacccggtgtttaaattaaatttgtatagatatttaatcagattaa 64520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 5030 - 4845
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||   ||||  ||||||| | ||| |||||| |||||||||||||  ||||||| |||| |||||||    
T  5030 catagttttaaaactcggctcggtcatcgactcgg-tagggtgttgggtcactcggttaatggtcgaaccactgagtcgctggtcgagccgcttgactga 4932  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    | | ||   |  |  || |||| ||||||| || ||||| | ||||||||||| ||||| ||||||||| |||||| ||||||||||    
T  4931 atcagattaaaccaaataactcagttagatgatccggtcttaagattaaatttttataggtatttaaccagattaaatcggattgaa 4845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 5050 - 4865
Alignment:
Q  25 catagttttaaaactaggctcgatcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 124  Q
    ||||||||||||||| |||||| ||||||||||||   ||||  ||||||| | ||| |||||| |||||||||||||  ||||||| |||| |||||||    
T  5050 catagttttaaaactcggctcggtcatcgactcgg-tagggtgttgggtcactcggttaatggtcgaaccactgagtcgctggtcgagccgcttgactga 4952  T
Q  125 acctgaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaa 211  Q
    | | ||   |  |  || |||| ||||||| || ||||| | ||||||||||| ||||| ||||||||| |||||| ||||||||||    
T  4951 atcagattaaaccaaataactcagttagatgatccggtcttaagattaaatttttataggtatttaaccagattaaatcggattgaa 4865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 7934 - 7874
Alignment:
Q  67 actgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaacc 127  Q
    |||||||||||| |||| |||| ||||||||||||||||||| ||| ||||||||||||||    
T  7934 actgggtcaatgagtcattggtcgaaccactgagtcattggttgaatcgcatgactgaacc 7874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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