View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14445_low_66 (Length: 205)

Name: NF14445_low_66
Description: NF14445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14445_low_66
NF14445_low_66
[»] chr4 (67 HSPs)
chr4 (1-68)||(39915763-39915829)
chr4 (1-66)||(38852859-38852924)
chr4 (1-63)||(26799341-26799403)
chr4 (1-66)||(43565990-43566055)
chr4 (1-62)||(32402677-32402738)
chr4 (1-64)||(53334079-53334142)
chr4 (1-62)||(14965336-14965396)
chr4 (1-61)||(23236998-23237059)
chr4 (1-62)||(29832288-29832349)
chr4 (1-62)||(34735918-34735978)
chr4 (1-62)||(37912445-37912506)
chr4 (1-66)||(48510858-48510922)
chr4 (1-61)||(10125703-10125762)
chr4 (1-61)||(20788358-20788418)
chr4 (1-61)||(22842905-22842964)
chr4 (1-61)||(23222471-23222530)
chr4 (17-65)||(26478185-26478233)
chr4 (1-61)||(37175392-37175451)
chr4 (1-64)||(16032287-16032349)
chr4 (1-64)||(19877750-19877812)
chr4 (3-61)||(56235149-56235206)
chr4 (1-62)||(288343-288403)
chr4 (1-62)||(1788816-1788876)
chr4 (1-61)||(22320528-22320588)
chr4 (3-63)||(27851165-27851224)
chr4 (1-61)||(28002514-28002573)
chr4 (1-61)||(39417799-39417858)
chr4 (1-61)||(49228123-49228182)
chr4 (1-61)||(50533768-50533828)
chr4 (1-61)||(51487769-51487829)
chr4 (1-64)||(34002168-34002230)
chr4 (1-54)||(8178187-8178238)
chr4 (154-205)||(17339085-17339136)
chr4 (1-63)||(23621636-23621697)
chr4 (154-205)||(41191607-41191658)
chr4 (154-205)||(50424833-50424884)
chr4 (154-205)||(52870651-52870702)
chr4 (3-61)||(56513679-56513736)
chr4 (1-61)||(2409741-2409801)
chr4 (1-62)||(4294151-4294211)
chr4 (1-62)||(29494985-29495045)
chr4 (1-54)||(30035520-30035572)
chr4 (2-63)||(37787875-37787935)
chr4 (1-54)||(43050172-43050224)
chr4 (1-62)||(47477195-47477256)
chr4 (154-182)||(422930-422958)
chr4 (1-51)||(1607013-1607060)
chr4 (6-54)||(13800338-13800385)
chr4 (1-61)||(13880451-13880510)
chr4 (1-61)||(18872435-18872494)
chr4 (1-61)||(22100915-22100974)
chr4 (1-61)||(23138036-23138094)
chr4 (145-181)||(23390351-23390387)
chr4 (1-61)||(23662526-23662585)
chr4 (1-61)||(25063832-25063891)
chr4 (1-61)||(26483209-26483268)
chr4 (150-182)||(30868803-30868835)
chr4 (2-62)||(32882119-32882179)
chr4 (1-61)||(34447632-34447691)
chr4 (1-61)||(38615279-38615338)
chr4 (150-182)||(38900044-38900076)
chr4 (152-205)||(45097144-45097197)
chr4 (1-61)||(45250070-45250129)
chr4 (144-205)||(49793088-49793149)
chr4 (150-182)||(50603099-50603131)
chr4 (2-62)||(54270768-54270827)
chr4 (1-69)||(56038638-56038705)
[»] chr8 (71 HSPs)
chr8 (1-62)||(1513546-1513607)
chr8 (1-62)||(10709322-10709383)
chr8 (1-62)||(11181241-11181302)
chr8 (1-62)||(41256423-41256483)
chr8 (1-64)||(31602936-31602999)
chr8 (1-63)||(38044912-38044973)
chr8 (1-62)||(9724582-9724643)
chr8 (1-62)||(26805047-26805107)
chr8 (1-62)||(39628840-39628901)
chr8 (1-62)||(39638390-39638451)
chr8 (1-61)||(12988204-12988264)
chr8 (1-61)||(21545254-21545314)
chr8 (1-64)||(44263329-44263392)
chr8 (1-62)||(26513688-26513747)
chr8 (1-62)||(7884511-7884571)
chr8 (1-62)||(9470806-9470866)
chr8 (1-62)||(29342705-29342765)
chr8 (1-62)||(34356513-34356573)
chr8 (1-61)||(26394042-26394102)
chr8 (1-65)||(31692730-31692792)
chr8 (1-64)||(18526330-18526392)
chr8 (1-63)||(3598864-3598926)
chr8 (1-63)||(15225838-15225898)
chr8 (1-63)||(16861971-16862032)
chr8 (1-62)||(543796-543857)
chr8 (1-54)||(899585-899637)
chr8 (1-62)||(1953271-1953331)
chr8 (3-52)||(2120484-2120533)
chr8 (1-54)||(17833915-17833968)
chr8 (1-54)||(23897687-23897739)
chr8 (1-54)||(28848963-28849015)
chr8 (1-66)||(29867252-29867316)
chr8 (1-62)||(33012062-33012122)
chr8 (1-61)||(2099186-2099245)
chr8 (1-61)||(18673368-18673427)
chr8 (1-61)||(29440864-29440923)
chr8 (1-61)||(30526157-30526216)
chr8 (1-61)||(38194689-38194748)
chr8 (1-63)||(28868720-28868780)
chr8 (1-63)||(5449524-5449586)
chr8 (1-63)||(5665669-5665730)
chr8 (1-63)||(17949659-17949721)
chr8 (1-63)||(22578203-22578264)
chr8 (154-205)||(29598231-29598282)
chr8 (154-205)||(38878728-38878779)
chr8 (1-46)||(548235-548280)
chr8 (17-62)||(3310811-3310856)
chr8 (1-65)||(4393885-4393947)
chr8 (1-46)||(4395487-4395531)
chr8 (27-64)||(5449296-5449333)
chr8 (1-62)||(13779931-13779991)
chr8 (1-62)||(16872582-16872643)
chr8 (1-62)||(24616515-24616575)
chr8 (1-62)||(25838695-25838755)
chr8 (1-62)||(31231097-31231157)
chr8 (1-62)||(37163756-37163816)
chr8 (1-66)||(38896681-38896745)
chr8 (1-54)||(43564593-43564644)
chr8 (3-51)||(1366756-1366803)
chr8 (1-54)||(3457028-3457083)
chr8 (1-61)||(4924404-4924464)
chr8 (3-63)||(8378313-8378373)
chr8 (152-205)||(8948330-8948383)
chr8 (1-61)||(11589016-11589075)
chr8 (1-61)||(14433371-14433430)
chr8 (1-61)||(15286582-15286642)
chr8 (1-61)||(15466951-15467011)
chr8 (1-65)||(30597270-30597334)
chr8 (2-62)||(32642621-32642680)
chr8 (1-61)||(35631027-35631086)
chr8 (19-63)||(45186907-45186951)
[»] chr1 (59 HSPs)
chr1 (1-62)||(3163174-3163235)
chr1 (1-63)||(46398596-46398658)
chr1 (1-64)||(48363593-48363655)
chr1 (1-62)||(42219809-42219869)
chr1 (1-62)||(52001231-52001292)
chr1 (1-63)||(16051870-16051932)
chr1 (1-62)||(12959519-12959579)
chr1 (1-62)||(17180670-17180731)
chr1 (1-62)||(30469513-30469574)
chr1 (1-69)||(290494-290561)
chr1 (1-61)||(2619568-2619628)
chr1 (2-62)||(15170288-15170348)
chr1 (1-61)||(28011067-28011126)
chr1 (1-61)||(28121255-28121313)
chr1 (1-61)||(33488124-33488183)
chr1 (1-61)||(39673720-39673780)
chr1 (1-61)||(42787855-42787915)
chr1 (1-61)||(43555044-43555103)
chr1 (1-63)||(2733839-2733900)
chr1 (1-63)||(9265007-9265069)
chr1 (1-63)||(13387523-13387584)
chr1 (1-62)||(16436054-16436115)
chr1 (1-54)||(39655359-39655412)
chr1 (1-62)||(47393604-47393664)
chr1 (1-62)||(51417589-51417649)
chr1 (1-65)||(1395675-1395738)
chr1 (1-61)||(17179489-17179548)
chr1 (1-61)||(31787069-31787128)
chr1 (1-61)||(35369616-35369675)
chr1 (1-61)||(49872498-49872558)
chr1 (1-60)||(8878763-8878821)
chr1 (19-62)||(14795160-14795203)
chr1 (1-64)||(18127331-18127393)
chr1 (4-62)||(7572530-7572588)
chr1 (1-63)||(23825224-23825284)
chr1 (1-63)||(27288871-27288933)
chr1 (1-66)||(45429999-45430064)
chr1 (3-62)||(46762112-46762173)
chr1 (1-62)||(83129-83188)
chr1 (2-63)||(5467118-5467178)
chr1 (1-62)||(6920952-6921012)
chr1 (1-62)||(13352450-13352510)
chr1 (1-54)||(26061884-26061936)
chr1 (1-54)||(29095254-29095306)
chr1 (1-61)||(31500749-31500807)
chr1 (1-62)||(38238865-38238925)
chr1 (145-182)||(45038364-45038401)
chr1 (1-62)||(50776160-50776221)
chr1 (1-62)||(52666810-52666871)
chr1 (1-54)||(52833606-52833658)
chr1 (1-61)||(4226239-4226298)
chr1 (145-181)||(6089733-6089769)
chr1 (1-61)||(6540686-6540745)
chr1 (2-62)||(7318800-7318859)
chr1 (154-182)||(14171549-14171577)
chr1 (1-61)||(23549426-23549485)
chr1 (1-61)||(31583311-31583370)
chr1 (17-65)||(41621016-41621064)
chr1 (152-205)||(41855452-41855505)
[»] chr6 (43 HSPs)
chr6 (1-61)||(29901194-29901254)
chr6 (1-66)||(8550162-8550227)
chr6 (1-66)||(29343970-29344035)
chr6 (1-61)||(29455352-29455410)
chr6 (1-64)||(6833742-6833805)
chr6 (1-62)||(2010291-2010351)
chr6 (1-62)||(10629539-10629599)
chr6 (1-62)||(24430147-24430208)
chr6 (1-62)||(32609791-32609851)
chr6 (1-61)||(16524740-16524799)
chr6 (1-65)||(31492876-31492939)
chr6 (1-65)||(31498265-31498328)
chr6 (1-65)||(31503652-31503715)
chr6 (1-64)||(32588673-32588735)
chr6 (139-181)||(4175234-4175276)
chr6 (3-61)||(5489575-5489633)
chr6 (3-61)||(34283343-34283400)
chr6 (1-62)||(1228224-1228284)
chr6 (1-62)||(17360598-17360658)
chr6 (1-62)||(31022609-31022668)
chr6 (1-61)||(690482-690541)
chr6 (1-61)||(9461573-9461633)
chr6 (1-61)||(20605569-20605628)
chr6 (1-61)||(30238809-30238868)
chr6 (3-62)||(16466386-16466444)
chr6 (2-64)||(11000365-11000426)
chr6 (1-63)||(21558663-21558725)
chr6 (1-66)||(8415226-8415290)
chr6 (6-63)||(9225639-9225696)
chr6 (3-60)||(11130115-11130171)
chr6 (1-54)||(12058576-12058628)
chr6 (30-63)||(20605822-20605855)
chr6 (1-61)||(29818182-29818242)
chr6 (143-205)||(34915522-34915584)
chr6 (1-52)||(78550-78602)
chr6 (1-61)||(9961315-9961374)
chr6 (154-182)||(10195995-10196023)
chr6 (1-61)||(12499693-12499752)
chr6 (1-61)||(12507022-12507081)
chr6 (1-61)||(12509149-12509208)
chr6 (154-182)||(19097803-19097831)
chr6 (1-61)||(29017027-29017086)
chr6 (1-61)||(32142375-32142434)
[»] chr2 (51 HSPs)
chr2 (1-61)||(29026968-29027028)
chr2 (1-65)||(518460-518524)
chr2 (1-61)||(1666981-1667041)
chr2 (1-61)||(44421575-44421635)
chr2 (1-63)||(6713883-6713945)
chr2 (1-63)||(14309127-14309188)
chr2 (1-66)||(2048220-2048285)
chr2 (1-62)||(22154235-22154295)
chr2 (1-62)||(27863023-27863083)
chr2 (1-61)||(3873633-3873693)
chr2 (1-61)||(38959735-38959794)
chr2 (1-61)||(40425183-40425243)
chr2 (1-64)||(4898350-4898413)
chr2 (1-64)||(4945744-4945807)
chr2 (1-63)||(5005245-5005305)
chr2 (1-63)||(16198390-16198451)
chr2 (17-63)||(29843899-29843945)
chr2 (3-64)||(11216589-11216649)
chr2 (1-50)||(12208362-12208411)
chr2 (1-62)||(19576045-19576105)
chr2 (1-54)||(23494448-23494501)
chr2 (1-64)||(19505855-19505916)
chr2 (1-61)||(28206630-28206689)
chr2 (1-61)||(6027074-6027131)
chr2 (154-205)||(20727837-20727888)
chr2 (1-63)||(31072638-31072699)
chr2 (1-63)||(44710056-44710118)
chr2 (1-62)||(5421432-5421492)
chr2 (1-62)||(8444220-8444280)
chr2 (1-46)||(14780925-14780968)
chr2 (1-62)||(22060978-22061038)
chr2 (1-62)||(27862691-27862751)
chr2 (30-63)||(29027222-29027255)
chr2 (1-62)||(34036096-34036157)
chr2 (1-54)||(35669693-35669745)
chr2 (1-62)||(37985523-37985582)
chr2 (1-62)||(41285826-41285886)
chr2 (145-182)||(43700969-43701006)
chr2 (1-53)||(1780297-1780348)
chr2 (1-61)||(6579700-6579759)
chr2 (1-61)||(7491676-7491735)
chr2 (2-62)||(8247361-8247420)
chr2 (1-61)||(21288851-21288910)
chr2 (1-61)||(22050690-22050749)
chr2 (2-62)||(22375242-22375301)
chr2 (1-61)||(30549792-30549851)
chr2 (1-64)||(31909798-31909862)
chr2 (152-205)||(34113536-34113589)
chr2 (1-61)||(34504341-34504400)
chr2 (1-61)||(40483618-40483676)
chr2 (152-205)||(40680732-40680785)
[»] chr3 (55 HSPs)
chr3 (1-64)||(43408264-43408326)
chr3 (1-61)||(51571751-51571811)
chr3 (1-63)||(8724277-8724338)
chr3 (1-63)||(9076164-9076225)
chr3 (1-62)||(49818277-49818337)
chr3 (1-61)||(44035141-44035201)
chr3 (1-65)||(51380247-51380310)
chr3 (1-64)||(29674856-29674918)
chr3 (3-54)||(33610315-33610366)
chr3 (2-65)||(47498128-47498190)
chr3 (1-62)||(23307775-23307835)
chr3 (1-54)||(39259265-39259317)
chr3 (1-62)||(43185343-43185403)
chr3 (1-54)||(43600874-43600927)
chr3 (1-61)||(23513114-23513174)
chr3 (2-62)||(40501098-40501157)
chr3 (1-61)||(52870660-52870719)
chr3 (1-64)||(40710735-40710797)
chr3 (1-64)||(47109285-47109347)
chr3 (1-63)||(37056613-37056675)
chr3 (1-63)||(37331411-37331473)
chr3 (1-62)||(35084560-35084620)
chr3 (1-62)||(38483555-38483615)
chr3 (1-62)||(49610169-49610229)
chr3 (1-61)||(5925300-5925358)
chr3 (1-61)||(13759861-13759920)
chr3 (1-61)||(21272628-21272687)
chr3 (1-61)||(32078018-32078078)
chr3 (1-61)||(41265511-41265570)
chr3 (3-62)||(22926035-22926093)
chr3 (3-62)||(43109591-43109649)
chr3 (1-64)||(45218714-45218776)
chr3 (1-63)||(23609456-23609517)
chr3 (1-63)||(30190321-30190382)
chr3 (1-63)||(38550872-38550933)
chr3 (1-63)||(38783664-38783725)
chr3 (1-63)||(38808084-38808146)
chr3 (1-63)||(45824108-45824169)
chr3 (150-205)||(46862345-46862400)
chr3 (154-205)||(50647923-50647974)
chr3 (1-62)||(34817127-34817187)
chr3 (1-62)||(43599569-43599629)
chr3 (30-67)||(46195619-46195656)
chr3 (1-62)||(48962791-48962851)
chr3 (2-54)||(49102438-49102491)
chr3 (1-61)||(8096827-8096887)
chr3 (152-205)||(20862201-20862254)
chr3 (1-61)||(27942237-27942296)
chr3 (1-61)||(29756744-29756803)
chr3 (1-61)||(34663430-34663489)
chr3 (1-61)||(41751101-41751160)
chr3 (141-181)||(45404369-45404409)
chr3 (1-61)||(47241162-47241221)
chr3 (1-61)||(48333710-48333769)
chr3 (1-61)||(54747930-54747989)
[»] chr5 (65 HSPs)
chr5 (1-63)||(8050385-8050447)
chr5 (1-61)||(5288845-5288905)
chr5 (1-63)||(35288112-35288174)
chr5 (1-63)||(35809449-35809511)
chr5 (1-62)||(22510399-22510459)
chr5 (1-62)||(32706730-32706790)
chr5 (1-62)||(38394349-38394409)
chr5 (1-61)||(29665314-29665373)
chr5 (1-63)||(40555067-40555128)
chr5 (1-63)||(41348956-41349017)
chr5 (1-62)||(8035741-8035802)
chr5 (1-62)||(11247918-11247978)
chr5 (1-61)||(5847027-5847086)
chr5 (1-61)||(36302917-36302977)
chr5 (1-61)||(39527431-39527490)
chr5 (1-64)||(7458573-7458635)
chr5 (1-63)||(4890160-4890222)
chr5 (1-62)||(4431511-4431571)
chr5 (1-62)||(5070778-5070838)
chr5 (1-54)||(9246032-9246084)
chr5 (1-62)||(13987545-13987605)
chr5 (1-62)||(25538038-25538099)
chr5 (1-62)||(33629952-33630012)
chr5 (1-61)||(33877-33936)
chr5 (1-61)||(10370547-10370606)
chr5 (1-61)||(18026122-18026181)
chr5 (1-61)||(24781187-24781246)
chr5 (1-61)||(27187435-27187494)
chr5 (1-61)||(32833564-32833623)
chr5 (1-61)||(35584936-35584995)
chr5 (1-64)||(2914420-2914482)
chr5 (3-62)||(13952216-13952274)
chr5 (150-181)||(38371978-38372009)
chr5 (1-63)||(2620264-2620324)
chr5 (1-63)||(13662434-13662496)
chr5 (1-63)||(13978447-13978508)
chr5 (3-61)||(19282666-19282723)
chr5 (1-63)||(39932809-39932869)
chr5 (1-54)||(440067-440119)
chr5 (1-54)||(4744712-4744763)
chr5 (1-62)||(8542759-8542819)
chr5 (1-54)||(9591361-9591413)
chr5 (1-62)||(12659006-12659066)
chr5 (1-54)||(13102878-13102931)
chr5 (3-64)||(13510605-13510665)
chr5 (3-64)||(21780526-21780586)
chr5 (1-62)||(29619440-29619500)
chr5 (1-62)||(32292452-32292512)
chr5 (1-61)||(34900223-34900284)
chr5 (1-61)||(590361-590420)
chr5 (1-61)||(4456393-4456452)
chr5 (1-61)||(7363320-7363379)
chr5 (1-61)||(9201129-9201188)
chr5 (3-51)||(9641029-9641076)
chr5 (1-61)||(13032898-13032958)
chr5 (152-205)||(16153234-16153287)
chr5 (3-63)||(19712480-19712539)
chr5 (1-61)||(21195259-21195317)
chr5 (1-61)||(26256298-26256358)
chr5 (2-62)||(27366457-27366516)
chr5 (1-61)||(28024562-28024621)
chr5 (145-181)||(31657683-31657719)
chr5 (1-61)||(35189177-35189236)
chr5 (1-45)||(36487299-36487342)
chr5 (1-64)||(42940761-42940825)
[»] scaffold0239 (2 HSPs)
scaffold0239 (1-62)||(15953-16014)
scaffold0239 (1-62)||(1458-1519)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-62)||(151638-151699)
[»] chr7 (49 HSPs)
chr7 (2-63)||(40020299-40020360)
chr7 (1-68)||(29410308-29410374)
chr7 (1-62)||(43073953-43074014)
chr7 (9-62)||(46578613-46578666)
chr7 (1-62)||(47988426-47988487)
chr7 (1-61)||(24302813-24302873)
chr7 (1-61)||(36669750-36669809)
chr7 (1-61)||(41887793-41887852)
chr7 (1-60)||(30264427-30264486)
chr7 (1-63)||(28703541-28703602)
chr7 (1-63)||(31502806-31502867)
chr7 (1-63)||(32467805-32467866)
chr7 (1-62)||(22326748-22326809)
chr7 (1-61)||(12804381-12804441)
chr7 (1-61)||(21849871-21849930)
chr7 (3-63)||(31466046-31466105)
chr7 (1-61)||(42584555-42584615)
chr7 (2-61)||(27116636-27116694)
chr7 (1-63)||(33616376-33616437)
chr7 (1-62)||(3458555-3458615)
chr7 (1-61)||(3945129-3945190)
chr7 (1-62)||(22369502-22369563)
chr7 (1-54)||(30803291-30803343)
chr7 (1-62)||(40537003-40537063)
chr7 (1-62)||(41877698-41877759)
chr7 (1-53)||(27059761-27059812)
chr7 (1-61)||(28586935-28586994)
chr7 (1-47)||(2849993-2850039)
chr7 (1-62)||(4089256-4089315)
chr7 (2-63)||(6696844-6696906)
chr7 (1-63)||(25651209-25651270)
chr7 (3-61)||(36916666-36916723)
chr7 (1-62)||(37115729-37115791)
chr7 (1-62)||(22918172-22918232)
chr7 (1-62)||(23059069-23059129)
chr7 (1-62)||(28472290-28472350)
chr7 (1-62)||(29669271-29669331)
chr7 (1-66)||(37798044-37798107)
chr7 (1-66)||(38074496-38074560)
chr7 (1-62)||(40704388-40704448)
chr7 (1-62)||(8565984-8566047)
chr7 (1-61)||(9417825-9417884)
chr7 (2-54)||(10316555-10316607)
chr7 (152-205)||(11647813-11647866)
chr7 (1-61)||(12263650-12263709)
chr7 (1-61)||(16875885-16875945)
chr7 (1-61)||(18975938-18975998)
chr7 (17-65)||(27119085-27119133)
chr7 (1-61)||(28536983-28537042)
[»] scaffold0983 (1 HSPs)
scaffold0983 (1-61)||(1292-1352)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-61)||(188811-188871)
scaffold0006 (30-62)||(187518-187550)
[»] scaffold0768 (1 HSPs)
scaffold0768 (1-64)||(6123-6186)
[»] scaffold0074 (2 HSPs)
scaffold0074 (1-64)||(45578-45640)
scaffold0074 (3-62)||(17457-17515)
[»] scaffold0654 (1 HSPs)
scaffold0654 (1-66)||(3051-3116)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-66)||(20662-20727)
[»] scaffold0789 (1 HSPs)
scaffold0789 (1-59)||(3313-3370)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-62)||(11718-11779)
[»] scaffold0380 (1 HSPs)
scaffold0380 (17-62)||(16240-16285)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-62)||(13025-13086)
scaffold0366 (1-46)||(276-320)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-62)||(18901-18962)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-61)||(23570-23629)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-61)||(8437-8495)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-64)||(2921-2983)
[»] scaffold0444 (1 HSPs)
scaffold0444 (3-61)||(7595-7652)
[»] scaffold0097 (1 HSPs)
scaffold0097 (154-205)||(31666-31717)
[»] scaffold0533 (1 HSPs)
scaffold0533 (1-54)||(7213-7266)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-62)||(4202-4263)
[»] scaffold0027 (1 HSPs)
scaffold0027 (30-63)||(11244-11277)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-61)||(98862-98921)


Alignment Details
Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39915829 - 39915763
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttttat 68  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  39915829 catataatttgggacaaattttttctcc-aaagcgacatacaatttaggacggatggaatatttttat 39915763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38852859 - 38852924
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||    
T  38852859 catataatttgggacaaatttttttttctaaaacgacatacaatttaggacggagggagtaatttt 38852924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26799403 - 26799341
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||||||    
T  26799403 catataatttgggacaaattttttctcctaaagcggcatacaatttgggacggaaggagtatt 26799341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43566055 - 43565990
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    |||| |||||||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||    
T  43566055 catacaatttgggacaatttttttttcctaaaatgacatacaatttaggacggagggagtattttt 43565990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32402738 - 32402677
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||||||||| |||||||    
T  32402738 catataatttgggacaattttttttccctaaagcgacatacaatttaggacggagggagtat 32402677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53334079 - 53334142
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| |||| || |||||||||    
T  53334079 catataatttgggacaaatttttttccctaaagcgacatacaatttgggaccgagggagtattt 53334142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14965396 - 14965336
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||    
T  14965396 catacaatttgggacaaattttttttcc-aaaacgacatacaatttgggacggagggagtat 14965336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23237059 - 23236998
Alignment:
Q  1 catataatttgggacaaattttttct-cctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||| ||||||| ||||||    
T  23237059 catataatttgggacaaattttttttccctaaagcgacatacaatttgggacggagggagta 23236998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29832288 - 29832349
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||   ||||| ||||||||||||| ||||||| |||||||    
T  29832288 catataatttgggacaaatttttttctctaaagcgacatacaatttgggacggagggagtat 29832349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34735978 - 34735918
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  34735978 catataatttgggacaatttttttc-cctaaagcgacatacaatttgggacggagggagtat 34735918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37912506 - 37912445
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||| ||||||||||||   ||||| ||||||||||||| |||||||||||||||    
T  37912506 catataatttgagacaaatttttttctctaaagcgacatacaatttgggacggatggagtat 37912445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48510858 - 48510922
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | |||||||||    
T  48510858 catataatttgggacaattttttt-tcctaaagcgacatacaatttgggacggaggaagtattttt 48510922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10125703 - 10125762
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  10125703 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 10125762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20788358 - 20788418
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||| | ||||| ||||||    
T  20788358 catataatttgggacaaattttttctcataaagcgacatataatttggaacggagggagta 20788418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22842964 - 22842905
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| ||||||    
T  22842964 catataatttgggacaaatttttt-ttctaaagcgacatacaatttgggacggagggagta 22842905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23222530 - 23222471
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||    
T  23222530 catacaatttgggacaaatttttt-tcctaaagcgacatacaatttgggacggagggagta 23222471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 26478185 - 26478233
Alignment:
Q  17 aattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  26478185 aattttttttcctaaagcgatatacaatttaggacggatggagtatttt 26478233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37175392 - 37175451
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  37175392 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 37175451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16032349 - 16032287
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||| |||||||||||| ||| ||| ||||||||||||||| ||||| |||||||||    
T  16032349 catataatttgagacaaattttttttcc-aaagcgacatacaatttagaacggagggagtattt 16032287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19877812 - 19877750
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||||| ||||||| |||||||||    
T  19877812 catataatttgggacaaatattttttcc-aaagcgacatacaatttgggacggagggagtattt 19877750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 56235206 - 56235149
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  56235206 tataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 56235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 288403 - 288343
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  288403 catataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtat 288343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1788816 - 1788876
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || |||| ||||||||||||| ||||||| |||||||    
T  1788816 catataatttgggacaaatattttttc-taaagcgacatacaatttgggacggagggagtat 1788876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22320588 - 22320528
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||| |||| || ||||||    
T  22320588 catataatttgggacaaatttttttttccaaagcgacatacaatttgggacagagggagta 22320528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 27851224 - 27851165
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||| ||||||||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  27851224 tataatttgggataaattttttttcc-aaagcgacatacaatttgggacggagggagtatt 27851165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28002573 - 28002514
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||||| ||||||| ||||||    
T  28002573 catataatttgggacaaattttttttcc-aaagcaacatacaatttgggacggagggagta 28002514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39417858 - 39417799
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| || |||| ||||||||||||| ||||||| ||||||    
T  39417858 catataatttgggacaatttttttttc-taaagcgacatacaatttgggacggagggagta 39417799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 49228123 - 49228182
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| |||||||| |||| ||||||| ||||||||||||| ||||||| ||||||    
T  49228123 catataattttggacaaatatttt-tcctaaagcgacatacaatttgggacggagggagta 49228182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50533828 - 50533768
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||||| ||||| ||||||    
T  50533828 catataatttgggacaaatatttttttctaaagtgacatacaatttagaacggagggagta 50533768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51487769 - 51487829
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||   ||||| ||||||||||||| ||||||| ||||||    
T  51487769 catataatttgggacaattttttttctctaaagcgacatacaatttgggacggagggagta 51487829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34002230 - 34002168
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||| |||||| |||||| || |||| ||||||||||||| ||||||| |||||||||    
T  34002230 catataatttaggacaatttttttttc-taaagcgacatacaatttgggacggagggagtattt 34002168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8178187 - 8178238
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||| |||||||    
T  8178187 catataatgtgggacaatttttttc--ctaaaacgacatacaatttgggacgga 8178238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 17339085 - 17339136
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  17339085 tccgtctctaattataagacccttttgagaattttttttgtccctttttata 17339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23621697 - 23621636
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| ||||||||    
T  23621697 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtatt 23621636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 41191658 - 41191607
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  41191658 tccgtctctaattataagacccttttgagaaaaaaatttgtccctttttata 41191607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 50424884 - 50424833
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  50424884 tccgtctctaattataagacccttttgagaattttttttgtccctttttata 50424833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 52870651 - 52870702
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  52870651 tccgtctctaattataagacccttttgagaaatttttttgtccctttttata 52870702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 56513679 - 56513736
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||| ||| |||  |||||||||||| ||||||| ||||||    
T  56513679 tataatttgggacaaattttttttcc-aaagggacatacaatttgggacggagggagta 56513736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2409801 - 2409741
Alignment:
Q  1 catataatttgggacaaattttt-tctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||||||| ||| ||||| |||| |||||||| ||||||| ||||||    
T  2409801 catataatttgggacaaatttttctct-ctaaagcgacgtacaatttgggacggagggagta 2409741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4294151 - 4294211
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| |||||||    
T  4294151 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagtat 4294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29494985 - 29495045
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| || |||| ||||||||||||| ||||||| |||||||    
T  29494985 catacaatttgggacaaatattttttc-taaagcgacatacaatttgggacggagggagtat 29495045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30035520 - 30035572
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||| |||||||    
T  30035520 catataatttgagacaattttttt-tcctaaagcgacatacaatttgggacgga 30035572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 37787935 - 37787875
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||||  ||||| ||||||||    
T  37787935 atataatttaggacaaattttttttcc-aaagcgacatacaatttaaaacggagggagtatt 37787875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43050224 - 43050172
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||| ||||||||||| ||| ||| ||||||||||||| |||||||    
T  43050224 catataatttggaacaaattttttttcc-aaagcgacatacaatttgggacgga 43050172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47477195 - 47477256
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||||||||   ||||| ||||||| ||||||| ||||| |||||||    
T  47477195 catacaatttgggacaaatttttttctctaaagcgacatataatttagaacggagggagtat 47477256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 422958 - 422930
Alignment:
Q  154 tccgtctctaattataagacccttttgag 182  Q
    |||||||||||||||||||||||||||||    
T  422958 tccgtctctaattataagacccttttgag 422930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1607013 - 1607060
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggac 51  Q
    ||||||||||||||||| ||||||   ||||| ||||||||||||||||||    
T  1607013 catataatttgggacaattttttt---ctaaagcgacatacaatttaggac 1607060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 13800385 - 13800338
Alignment:
Q  6 aatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  13800385 aatttgggacaaattttttttcc-aaagcgacatacaatttgggacgga 13800338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13880510 - 13880451
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  13880510 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 13880451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18872435 - 18872494
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||  |||| |||||| ||| ||| ||||||||||||||||||||| ||||||    
T  18872435 catataatttgaaacaatttttttttcc-aaagcgacatacaatttaggacggagggagta 18872494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22100974 - 22100915
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||  ||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  22100974 catataatttgggacaacatttttttcc-aaagcgacatacaatttgggacggagggagta 22100915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23138094 - 23138036
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  23138094 catataatttgggacaattttttt-tcc-aaagcgacatacaatttgggacggagggagta 23138036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 23390387 - 23390351
Alignment:
Q  145 aatagtacatccgtctctaattataagacccttttga 181  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  23390387 aatactacatccgtctctaattataagacctttttga 23390351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23662585 - 23662526
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||| |||||| ||||||||| ||||||||||| |||| || ||||||    
T  23662585 catacaatttgggacaattttttt-tcctaaaacaacatacaatttgggaccgagggagta 23662526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25063832 - 25063891
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| ||||||||||| | | ||| ||||||||||||| ||||||| ||||||    
T  25063832 catataatttggaacaaatttttttttc-aaagcgacatacaatttgggacggaaggagta 25063891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26483209 - 26483268
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||| |||| || ||||| ||||||||||||| |||||| ||||||    
T  26483209 catacaatttgggacaaatattttttc-taaaatgacatacaatttaagacggagggagta 26483268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 30868835 - 30868803
Alignment:
Q  150 tacatccgtctctaattataagacccttttgag 182  Q
    |||||||||| ||||||||||||||||||||||    
T  30868835 tacatccgtccctaattataagacccttttgag 30868803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 32882179 - 32882119
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||| |||||| ||||  |||||||| ||||||||||| |||| || |||||||    
T  32882179 atataatttggaacaaatatttttccctaaaacaacatacaatttgggacagagggagtat 32882119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34447691 - 34447632
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  34447691 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 34447632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38615279 - 38615338
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| |||||||| |||| ||||||| ||||||||||||| | ||||| ||||||    
T  38615279 catataatttaggacaaatatttt-tcctaaagcgacatacaatttggaacggagggagta 38615338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 38900076 - 38900044
Alignment:
Q  150 tacatccgtctctaattataagacccttttgag 182  Q
    ||||||||||||||||||||||| |||||||||    
T  38900076 tacatccgtctctaattataagatccttttgag 38900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 45097197 - 45097144
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  45097197 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 45097144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45250129 - 45250070
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||| |||| || ||||| |||||||||||| ||||||| ||||||    
T  45250129 catacaatttgggacaaatattttttc-taaaatgacatacaatttgggacggagggagta 45250070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 49793088 - 49793149
Alignment:
Q  144 aaatagtacatccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    ||||| ||| |||||| ||||||||||||||||||||||       ||||||||||||||||    
T  49793088 aaatactacctccgtccctaattataagacccttttgagaattttttttgtccctttttata 49793149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 50603131 - 50603099
Alignment:
Q  150 tacatccgtctctaattataagacccttttgag 182  Q
    ||||||||||||||||||||| |||||||||||    
T  50603131 tacatccgtctctaattataatacccttttgag 50603099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 54270827 - 54270768
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||| |||||| |||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  54270827 atataatttaggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtat 54270768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 56038638 - 56038705
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttttatt 69  Q
    |||| |||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||| |||||||    
T  56038638 catacaatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtaattttatt 56038705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 8e-20; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1513546 - 1513607
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  1513546 catataatttgggacaaatttttcctcctaaaacgacatataatttaggacggagggagtat 1513607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10709322 - 10709383
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  10709322 catataatttgggacaaattttttctcctagagcgacatacaatttgggacggagggagtat 10709383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11181302 - 11181241
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||||||    
T  11181302 catataatttgggacaatttttttttcctaaaacgacatacaatttgggacggagggagtat 11181241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41256423 - 41256483
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  41256423 catataatttaggacaaattttttttcc-aaaacgacatacaatttaggacggatggagtat 41256483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31602936 - 31602999
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||| |||||||||    
T  31602936 catataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtattt 31602999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38044973 - 38044912
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  38044973 catataatttaggacaaattttttttcc-aaaacgacatacaatttaggacggagggagtatt 38044912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9724643 - 9724582
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| |||||||    
T  9724643 catataatttgggacaatttttttttcctaaagcgacatacaatttgggacggagggagtat 9724582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26805047 - 26805107
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||    
T  26805047 catataatttgggataaattttttc-cctaaaacgacatacaatttgggacggagggagtat 26805107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39628901 - 39628840
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||| |||||||    
T  39628901 catataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtat 39628840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39638451 - 39638390
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||| |||||||    
T  39638451 catataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtat 39638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12988204 - 12988264
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||||    
T  12988204 catataatttgggacaaaattttttccctaaaacgacatacaatttgggacggagggagta 12988264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21545314 - 21545254
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||||||| | |||||| |||| |||||||||||||||| ||||||    
T  21545314 catataatttgggacaaatttttccccctaaagcgacgtacaatttaggacggagggagta 21545254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44263329 - 44263392
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||| ||||||| |||||||||    
T  44263329 catataatttgggacaaatatttttccctaaagcgacatacaatttgggacggagggagtattt 44263392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26513747 - 26513688
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||  ||| ||||||||||||||||||||| |||||||    
T  26513747 catataatttgggacaaattttttttc--aaagcgacatacaatttaggacggagggagtat 26513688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7884511 - 7884571
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||||||||||| |||||||    
T  7884511 catataatttgggacaatttttttttcc-aaagcgacatacaatttaggacggagggagtat 7884571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9470866 - 9470806
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| |||||||    
T  9470866 catataatttgggacaattttttt-tcctaaagcgacatacaatttgggacggagggagtat 9470806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29342765 - 29342705
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||||    
T  29342765 catataatttgggacaaatatttt-tcctaaagcgacatacaatttgggacggagggagtat 29342705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34356573 - 34356513
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||| ||||||| |||||||    
T  34356573 catataatttgggacaaattttttc-cctaaggcgacatacaatttgggacggagggagtat 34356513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26394042 - 26394102
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||  ||||| |||||| ||||||||||||| ||||||| ||||||    
T  26394042 catataatttgggacaaaaattttcccctaaagcgacatacaatttgggacggagggagta 26394102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31692792 - 31692730
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||||||    
T  31692792 catataatttgggacaaatttttt-tcc-aaagcgacatacaatttgggacggagggagtatttt 31692730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18526392 - 18526330
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| |||||||||    
T  18526392 catataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtattt 18526330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3598864 - 3598926
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||||  |||||| ||||||||    
T  3598864 catataatttggaacaaatatttttccctaaaacgacatacaatttgagacggagggagtatt 3598926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15225898 - 15225838
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  15225898 catataatttgggacaaatttttt-tcc-aaagcgacatacaatttgggacggagggagtatt 15225838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16861971 - 16862032
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||||| ||||||| ||||||||    
T  16861971 catataatttgggacaaattttttttcc-aaagcaacatacaatttgggacggagggagtatt 16862032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 543796 - 543857
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||| |||||||||||| ||||||   ||||| ||||||||||||| |||||||    
T  543796 catataatttggtacaaattttttcgcctaaagtaacatataatttaggacggagggagtat 543857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 899585 - 899637
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||||| |||| || |||| |||||||||||||||||||||    
T  899585 catataatttgggacaaatattttttc-taaagcgacatacaatttaggacgga 899637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1953331 - 1953271
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||| |||| || |||||||    
T  1953331 catataatttgggacaaattttttttcc-aaaacgatatacaatttgggacagagggagtat 1953271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 2120484 - 2120533
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacg 52  Q
    |||||||||||||||||||||||  ||||| ||||||||||||| |||||    
T  2120484 tataatttgggacaaattttttcctctaaagcgacatacaatttgggacg 2120533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17833968 - 17833915
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||| |||||| |||||| ||||||| ||||||||||||| |||||||    
T  17833968 catataatttaggacaatttttttttcctaaagcgacatacaatttgggacgga 17833915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23897739 - 23897687
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  23897739 catataatttggaacaaattttttttcc-aaagcgacatacaatttaggacgga 23897687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28849015 - 28848963
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  28849015 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacgga 28848963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29867316 - 29867252
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| ||| ||| |||||| ||||    
T  29867316 catataatttgggacaatttttttc-cctaaagcgacatacaatttgggatggagggagtactttt 29867252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33012122 - 33012062
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| || |||||||||| ||||||| ||||||||||||| ||||||| |||||||    
T  33012122 catataattttggccaaatttttt-tcctaaagcgacatacaatttgggacggagggagtat 33012062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2099186 - 2099245
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||| ||||||| ||||||    
T  2099186 catataatttgggacaaatattttttc-taaaatgacatacaatttgggacggaaggagta 2099245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18673427 - 18673368
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  18673427 catataatttgggacaaatattttttc-taaagtgacatacaatttaggacggagggagta 18673368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29440923 - 29440864
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| ||||| ||||||||||||| ||| ||||||||||||||||| ||||||| ||||||    
T  29440923 catacaatttaggacaaattttttttcc-aaaacgacatacaatttgggacggagggagta 29440864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30526216 - 30526157
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  30526216 catacaatttgggacaaatattttttc-taaaatgacatacaatttaggacggagggagta 30526157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38194689 - 38194748
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  38194689 catataatttaggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 38194748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28868780 - 28868720
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| |||  |||  ||||||||||| ||||||| ||||||||    
T  28868780 catataatttgggacaaattttttttcc--aaagcacatacaatttgggacggagggagtatt 28868720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5449524 - 5449586
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||| |||||||| ||||  |||||| ||||||||||||| | ||||| ||||||||    
T  5449524 catataatttaggacaaatatttttccctaaagcgacatacaatttggaacggagggagtatt 5449586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5665730 - 5665669
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||| |||||||  |||||||    
T  5665730 catataatttgggacaaattttttttcc-aaagcgacatataatttgggacggagagagtatt 5665669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17949659 - 17949721
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||| ||||| ||||||   ||||| ||||||||||||| ||||||| ||||||||    
T  17949659 catataatttgagacaactttttttcgctaaagcgacatacaatttgggacggagggagtatt 17949721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22578264 - 22578203
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| ||||||||    
T  22578264 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtatt 22578203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 29598231 - 29598282
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  29598231 tccgtctctaattataagacccttttgagaattttttttgtccctttttata 29598282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 38878728 - 38878779
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  38878728 tccgtctctaattataagacccttttgagaattttttttgtccctttttata 38878779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 548235 - 548280
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaattt 46  Q
    |||||||||||||| |||| |||||||||||| ||| |||||||||    
T  548235 catataatttgggataaatattttctcctaaagcgatatacaattt 548280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 3310856 - 3310811
Alignment:
Q  17 aattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||| ||||||| ||||||||||||| ||||||| |||||||    
T  3310856 aattttttttcctaaagcgacatacaattttggacggaaggagtat 3310811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4393947 - 4393885
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    ||||||||||| |||||||||||| |   ||||||||||||||||||||||| | ||| ||||||    
T  4393947 catataatttgagacaaattttttttg--aaaacgacatacaatttaggacgtagggattatttt 4393885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4395487 - 4395531
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaattt 46  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||    
T  4395487 catataatttgggacaaattttttc-actaaagcgacatacaattt 4395531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 5449333 - 5449296
Alignment:
Q  27 cctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  5449333 cctaaaacgccatacaatttaggacggagggagtattt 5449296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13779931 - 13779991
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| || ||||  |||||||||||| |||||||||||||||    
T  13779931 catacaatttgggacaaatattttttc-taaagtgacatacaatttgggacggatggagtat 13779991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16872582 - 16872643
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||| |||||| | |||||  |||||||||||| ||||||| |||||||    
T  16872582 catacaatttgggacaattttttttttctaaagtgacatacaatttgggacggagggagtat 16872643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24616575 - 24616515
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| || ||||| | |||||||||| |||||||||||||||    
T  24616575 catacaatttgggacaaatattttttc-taaaatggcatacaatttgggacggatggagtat 24616515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25838695 - 25838755
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| || ||||| |||||||||||| ||||||| |||||||    
T  25838695 catacaatttgggacaaatattttttc-taaaatgacatacaatttgggacggagggagtat 25838755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31231097 - 31231157
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| |||||||    
T  31231097 catataatttgggacaaatatttt-ttctaaagtgacatacaattttggacggagggagtat 31231157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37163756 - 37163816
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||| |||| |||||| || |||| ||||||||||||| ||||||| |||||||    
T  37163756 catataatttggaacaatttttttttc-taaagcgacatacaatttgggacggagggagtat 37163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38896681 - 38896745
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    |||| |||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||||||    
T  38896681 catacaatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtattttt 38896745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43564644 - 43564593
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  43564644 catataatttgggacaaatttttt-tcc-aaagcgacatacaatttgggacgga 43564593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 1366803 - 1366756
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggac 51  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||| ||||    
T  1366803 tataatttgggacaaattttttttcc-aaagcgacatacaatttgggac 1366756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3457083 - 3457028
Alignment:
Q  1 catataatttgggacaaattttttctcct--aaaacgacatacaatttaggacgga 54  Q
    |||||||||| ||||||||||||| | ||  ||||||||||||||||| |||||||    
T  3457083 catataatttaggacaaatttttttttctccaaaacgacatacaatttgggacgga 3457028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4924464 - 4924404
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||| ||||||  ||||| |||||||||||||  |||||| ||||||    
T  4924464 catataatttaggacaaaatttttcatctaaagcgacatacaatttgagacggagggagta 4924404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 8378313 - 8378373
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||| ||||| |||||| | |||||  |||||||||||| ||||||| ||||||||    
T  8378313 tataatttgagacaattttttttttctaaagtgacatacaatttgggacggagggagtatt 8378373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 8948383 - 8948330
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  8948383 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 8948330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11589016 - 11589075
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| ||| |||||||| |||||||| |||||||| ||| ||||||| ||||||    
T  11589016 catataatttgtgac-aattttttttcctaaaatgacatacagtttgggacggagggagta 11589075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14433371 - 14433430
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  14433371 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 14433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15286582 - 15286642
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||  || |||  || ||||||||| ||||||||||||||    
T  15286582 catataatttgggacaattttttttcccaaaagggatatacaatttgggacggatggagta 15286642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15466951 - 15467011
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||  || |||  || ||||||||| ||||||||||||||    
T  15466951 catataatttgggacaattttttttcccaaaagggatatacaatttgggacggatggagta 15467011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30597270 - 30597334
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||| ||||| ||| |||| |||| | |||||| |||||||||||| ||||||| ||||||||||    
T  30597270 catacaatttaggataaatatttttttctaaaatgacatacaattttggacggagggagtatttt 30597334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 32642621 - 32642680
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||   ||||| |||||||||| || ||||||| |||||||    
T  32642621 atataatttgggacaaatttttttctctaaagcgacatacaa-ttgggacggagggagtat 32642680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35631086 - 35631027
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  35631086 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 35631027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 45186951 - 45186907
Alignment:
Q  19 ttttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||| | ||||||||||||||||| ||||||| ||||||||    
T  45186951 ttttttcttccaaaacgacatacaatttgggacggagggagtatt 45186907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 8e-20; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3163235 - 3163174
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  3163235 catataatttgggacaaattttttctcctaaagcgacatacaatttgggacggagggagtat 3163174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 46398658 - 46398596
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  46398658 catataatttgagacaaattttttctcctaaagcgacatacaatttgggacggagggagtatt 46398596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48363593 - 48363655
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  48363593 catataatttggaacaaattttttttcc-aaaacgacatacaatttaggacggagggagtattt 48363655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42219809 - 42219869
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||    
T  42219809 catataatttgggacaaattttttttcc-aaagcgacatacaatttaggacggagggagtat 42219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52001231 - 52001292
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||| | |||||||    
T  52001231 catataatttgggacaaatttttttccctaaagcgacatacaatttaggacgaagggagtat 52001292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16051870 - 16051932
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||| |||||||||||||||||||  |||||| ||||||||||||| ||||||| ||||||||    
T  16051870 catacaatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtatt 16051932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12959519 - 12959579
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| |||||||    
T  12959519 catataatttgggacaattttttt-tcctaaagcgacatacaatttgggacggagggagtat 12959579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17180731 - 17180670
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||| |||||||||||  |||||| ||||||||||||| ||||||| |||||||    
T  17180731 catataatttggaacaaatttttttccctaaagcgacatacaatttgggacggagggagtat 17180670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30469574 - 30469513
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| |||||||||||||  |||||| ||||||||||||| ||||||| |||||||    
T  30469574 catataattttggacaaatttttttccctaaagcgacatacaattttggacggagggagtat 30469513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 290494 - 290561
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttttatt 69  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||||| |||||    
T  290494 catataatttgggacaaatttttttttc-aaagcgacatacaatttgggacggagggagtattattatt 290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2619568 - 2619628
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||  ||||||||||||  |||||||||||||||||||| ||||||| ||||||    
T  2619568 catataatttaagacaaattttttaccctaaaacgacatacaatttgggacggagggagta 2619628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 15170288 - 15170348
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||||    
T  15170288 atataatttgggacaaatttttttttccaaagcgacatacaatttgggacggagggagtat 15170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28011126 - 28011067
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  28011126 catacaatttgggacaaattttttc-cctaaagcgacatacaatttgggacggagggagta 28011067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28121313 - 28121255
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  28121313 catataatttggaacaaatttttt-tcc-aaaacgacatacaatttaggacggagggagta 28121255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33488124 - 33488183
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| ||||||    
T  33488124 catataatttgggacaaatttttt-ttctaaagcgacatacaatttgggacggagggagta 33488183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39673720 - 39673780
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| ||||||| ||||||    
T  39673720 catataatttgggacaattttttttttccaaaacgacatacaatttgggacggagggagta 39673780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42787915 - 42787855
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||  ||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  42787915 catataatttatgacaaattttttcccctaaagcgacatacaatttgggacggagggagta 42787855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43555044 - 43555103
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| |||| || ||||||    
T  43555044 catataatttgggacaaattttttct-ctaaagcgacatacaatttgggacagagggagta 43555103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2733900 - 2733839
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  2733900 catataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtatt 2733839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9265007 - 9265069
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||| ||||| |||||||||||||| |  || ||||||| ||||||||    
T  9265007 catataatttgggacaaatattttcccctaaaacgacatatatattgggacggagggagtatt 9265069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13387584 - 13387523
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||| ||||||||| || |||| ||||||||||||| ||||||| ||||||||    
T  13387584 catataatttgggataaattttttttc-taaagcgacatacaatttgggacggagggagtatt 13387523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16436115 - 16436054
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||| ||||| |||||||| |||||  |||||||||||| ||||||| |||||||    
T  16436115 catataatttgtgacaatttttttcttctaaagtgacatacaatttgggacggagggagtat 16436054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39655412 - 39655359
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||||| ||||||  ||||| ||||||||||||| |||||||    
T  39655412 catataatttgggacaaaatttttcctctaaagcgacatacaatttgggacgga 39655359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47393604 - 47393664
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| |  ||||| ||||||||||||||||||||||||||||    
T  47393604 catacaatttgggacaaatattttttt-taaaatgacatacaatttaggacggatggagtat 47393664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51417589 - 51417649
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||| ||||||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  51417589 catataatttgggataaattttttttcc-aaagcgacatacaatttgggacggagggagtat 51417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1395738 - 1395675
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    ||||||||||| |||||||||||| ||| ||| ||||||||||||| ||||||| | ||||||||    
T  1395738 catataatttgagacaaattttttttcc-aaagcgacatacaatttgggacggaggaagtatttt 1395675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17179489 - 17179548
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| ||||||||||||||||||| ||| ||| |||||||||||||| |||||| ||||||    
T  17179489 catacaatttgggacaaattttttttcc-aaagcgacatacaatttaagacggagggagta 17179548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31787128 - 31787069
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||  |||||| ||||||    
T  31787128 catataatttgggacaattttttt-tcctaaagcgacatacaatttgtgacggagggagta 31787069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35369616 - 35369675
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| ||| |||||||||||| |||| ||||||| ||||||    
T  35369616 catataatttgggacaatttttttttcc-aaaacgacatacgatttgggacggagggagta 35369675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49872558 - 49872498
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||| | ||||||  |||||| ||||||||||||| ||||||| ||||||    
T  49872558 catataatttgggactattttttttccctaaagcgacatacaatttgggacggagggagta 49872498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8878821 - 8878763
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagt 60  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||| ||| ||| |||||    
T  8878821 catataatttgagacaattttttt-tcctaaaacgacatacaatttgggatggagggagt 8878763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 14795160 - 14795203
Alignment:
Q  19 ttttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||    
T  14795160 ttttttctcctaaaatgacatacaatttgggacggagggagtat 14795203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18127393 - 18127331
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||||    
T  18127393 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtattt 18127331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 7572530 - 7572588
Alignment:
Q  4 ataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||| ||||||||||||   ||||| ||||||||||||| ||||||| |||||||    
T  7572530 ataatttgcgacaaatttttttctctaaagcgacatacaatttgggacggagggagtat 7572588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23825224 - 23825284
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| ||| ||| |||| |||||||| ||||||| ||||||||    
T  23825224 catataatttgggacaaatttttt-tcc-aaagcgacgtacaatttgggacggagggagtatt 23825284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27288871 - 27288933
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||| ||||||   ||||| ||||||| ||||| ||||||| ||||||||    
T  27288871 catataatttgggacaattttttttctctaaagcgacatataatttgggacggagggagtatt 27288933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45430064 - 45429999
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttag-gacggatggagtattttt 66  Q
    |||||||||||| |||||||||||  || ||||||||||||||||| | |||||| |||||||||||    
T  45430064 catataatttgg-acaaatttttttcccaaaaacgacatacaattttgagacggagggagtattttt 45429999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 46762173 - 46762112
Alignment:
Q  3 tataatttgggacaaattttttc--tcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||| ||||||   || ||||||||||||||||||||||| || |||||||    
T  46762173 tataatttgggacaattttttttcttcttaaaacgacatacaatttaggactgagggagtat 46762112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 83129 - 83188
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| |||||||    
T  83129 catataatttgagacaattttttt-tcc-aaagcgacatacaatttaggacggagggagtat 83188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 5467118 - 5467178
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||||  ||||| ||||||||    
T  5467118 atataatttaggacaaatattttttcc-aaaacgacatacaatttaaaacggagggagtatt 5467178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6920952 - 6921012
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| |||||||    
T  6920952 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagtat 6921012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13352510 - 13352450
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| ||| |||  |||||||||||| ||||||| |||||||    
T  13352510 catataatttgggacaaatattttttcc-aaagggacatacaatttgggacggagggagtat 13352450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26061884 - 26061936
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||| |||||| |||||||  |||||||||||| |||||||    
T  26061884 catataatttgggacaattttttt-tcctaaagtgacatacaatttgggacgga 26061936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29095306 - 29095254
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||||| |||| || ||||  ||||||||||||||||||||    
T  29095306 catataatttgggacaaatattttttc-taaagtgacatacaatttaggacgga 29095254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31500749 - 31500807
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||   ||||||||||||| ||||| ||||||| ||||||    
T  31500749 catataatttgggacaatttttttt--ctaaaacgacatataatttgggacggagggagta 31500807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38238925 - 38238865
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||    
T  38238925 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtat 38238865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 45038401 - 45038364
Alignment:
Q  145 aatagtacatccgtctctaattataagacccttttgag 182  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  45038401 aatactacatccgtcgctaattataagacccttttgag 45038364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50776221 - 50776160
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| | ||||| ||||||| ||||| ||||||||||||||| ||| | |||||||    
T  50776221 catataatttagaacaaaatttttcttctaaagcgacatacaatttagaacgaagggagtat 50776160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52666871 - 52666810
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||  |||||  ||||| ||||||||||||| |||| || |||||||    
T  52666871 catataatttgggacaaaaattttcctctaaagcgacatacaatttgggacagagggagtat 52666810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 52833658 - 52833606
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||||| | || || ||||| ||||||||||||||||||||    
T  52833658 catataatttgggacaaatatattttc-taaaatgacatacaatttaggacgga 52833606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4226298 - 4226239
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  4226298 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 4226239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 6089733 - 6089769
Alignment:
Q  145 aatagtacatccgtctctaattataagacccttttga 181  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  6089733 aatactacctccgtctctaattataagacccttttga 6089769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6540686 - 6540745
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| | | ||| ||||||||||||| ||||||| ||||||    
T  6540686 catataatttgggacaattttttttttc-aaagcgacatacaatttgggacggagggagta 6540745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 7318800 - 7318859
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||| |||  || |||||||||||||  |||||| |||||||    
T  7318800 atataatttgggacaaattttttttcc-gaagcgacatacaatttgagacggagggagtat 7318859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 14171549 - 14171577
Alignment:
Q  154 tccgtctctaattataagacccttttgag 182  Q
    |||||||||||||||||||||||||||||    
T  14171549 tccgtctctaattataagacccttttgag 14171577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23549426 - 23549485
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| |||||||||||| ||| | | ||||||||||||| ||||||| ||||||    
T  23549426 catataatttgagacaaattttttttcc-atagcgacatacaatttgggacggagggagta 23549485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31583311 - 31583370
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| ||| ||| |||||||||||||  |||||| ||||||    
T  31583311 catataatttgggacaatttttttttcc-aaagcgacatacaatttgagacggagggagta 31583370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 41621016 - 41621064
Alignment:
Q  17 aattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||||||| | ||||| |||||||||||||||||||||  |||||||||    
T  41621016 aatttttttttctaaagcgacatacaatttaggacggaaagagtatttt 41621064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 41855505 - 41855452
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  41855505 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 41855452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 3e-19; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29901254 - 29901194
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  29901254 catataatttgggacaaattttttctcctaaagcgacatacaatttgggacggagggagta 29901194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8550227 - 8550162
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||| || |||||| ||||    
T  8550227 catataatttgggacaaattttttctcctaaagcgacatacaatttgggacagagggagtagtttt 8550162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29344035 - 29343970
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    ||||||||||||||||||||||||  | |||||||||||||||||| ||||||| |||||| ||||    
T  29344035 catataatttgggacaaatttttttccttaaaacgacatacaatttgggacggagggagtagtttt 29343970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29455410 - 29455352
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||    
T  29455410 catataatttgggacaatttttttc--ctaaaacgacatacaatttaggacggagggagta 29455352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6833805 - 6833742
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||| ||||||||||||  |||||| ||||||||||||||||| ||| |||||||||    
T  6833805 catataatttgagacaaatttttttccctaaagcgacatacaatttaggatggagggagtattt 6833742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2010291 - 2010351
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||| |||||||    
T  2010291 catataatttgggacaaaatttttctcc-aaagcgacatacaatttgggacggagggagtat 2010351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10629539 - 10629599
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  10629539 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagtat 10629599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24430208 - 24430147
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||| ||||| | |||||||    
T  24430208 catataatttgggacaaatttttttccctaaaacgacatataatttgggacgaagggagtat 24430147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32609851 - 32609791
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  32609851 catataatttgggacaa-ttttttcccctaaagcgacatacaatttgggacggagggagtat 32609791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16524740 - 16524799
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  16524740 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 16524799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31492939 - 31492876
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||| |||||||||||| |||||| |||||||| ||||||||||||| ||||||||| |||||||    
T  31492939 catacaatttgggacaattttttt-tcctaaaatgacatacaatttaagacggatggggtatttt 31492876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31498328 - 31498265
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||| |||||||||||| |||||| |||||||| ||||||||||||| ||||||||| |||||||    
T  31498328 catacaatttgggacaattttttt-tcctaaaatgacatacaatttaagacggatggggtatttt 31498265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31503715 - 31503652
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||| |||||||||||| |||||| |||||||| ||||||||||||| ||||||||| |||||||    
T  31503715 catacaatttgggacaattttttt-tcctaaaatgacatacaatttaagacggatggggtatttt 31503652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32588735 - 32588673
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||| |||||    
T  32588735 catacaatttgggacaaattttttttcc-aaagcgacatacaatttaggacggagggaatattt 32588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 4175234 - 4175276
Alignment:
Q  139 aaacaaaatagtacatccgtctctaattataagacccttttga 181  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  4175234 aaaccaaatactacatccgtctctaattataagacccttttga 4175276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 5489633 - 5489575
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||| ||||||| |||||| ||||| ||||||||||||| ||||||| ||||||    
T  5489633 tataatttgagacaaatattttcttctaaagcgacatacaatttgggacggagggagta 5489575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 34283400 - 34283343
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  34283400 tataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 34283343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1228224 - 1228284
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| ||| || |||||  |||||||||||||||||||| |||||||    
T  1228224 catataatttgggacaaatattt-cttctaaagtgacatacaatttaggacggagggagtat 1228284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17360658 - 17360598
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| || ||||  ||||||||||||||||||||||||||||    
T  17360658 catacaatttgggacaaatattttttc-taaagtgacatacaatttaggacggatggagtat 17360598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31022609 - 31022668
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||| |||||||    
T  31022609 catataatttaggacaaatttttt-tcc-aaagcgacatacaatttaggacggagggagtat 31022668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 690482 - 690541
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||||||| ||| ||||||    
T  690482 catataatttgggacaaatattttttc-taaaatgacatacaatttaggatggagggagta 690541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9461633 - 9461573
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  9461633 catataatttgggacaaatatttttttctaaagtgacatacaatttgggacggagggagta 9461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20605628 - 20605569
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| |||||||| |||| ||||||||||| ||||||||| ||||||| ||||||    
T  20605628 catataatttaggacaaatatttt-tcctaaaacgaaatacaatttgggacggagggagta 20605569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30238868 - 30238809
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| |||| ||||||| |||||| ||||||||||||| ||||||| ||||||    
T  30238868 catataatttggaacaatttttttc-cctaaagcgacatacaatttgggacggagggagta 30238809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16466386 - 16466444
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||| |||||| ||| ||| || |||||||||||||||||| |||||||    
T  16466386 tataatttgggacaatttttttttcc-aaagcggcatacaatttaggacggagggagtat 16466444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 11000426 - 11000365
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||| |||||||| ||||| | |||||||| |||||||||| | |||||||    
T  11000426 atataatttgggacaatttttttct-ctaaagcaacatacaaattaggacggaggaagtattt 11000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21558663 - 21558725
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||| ||  |||||||||  |||||||||||||||||||| ||||||| | ||||||    
T  21558663 catataatttaggttaaatttttttccctaaaacgacatacaatttgggacggaggaagtatt 21558725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8415226 - 8415290
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    |||| ||| |||||||||| |||| || ||||  |||||||||||| |||||||||||||||||||    
T  8415226 catacaatatgggacaaatattttttc-taaagtgacatacaatttgggacggatggagtattttt 8415290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 9225639 - 9225696
Alignment:
Q  6 aatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||| |||||| |   ||||||||||||||||| ||||||| ||||||||    
T  9225639 aatttgggacaatttttttttttcaaaacgacatacaatttgggacggagggagtatt 9225696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 11130171 - 11130115
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagt 60  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||  ||||||| |||||    
T  11130171 tataatttgggacaatttttttc-ccttaaacgacatacaattcgggacggagggagt 11130115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12058628 - 12058576
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||||| |||| | ||||| ||||||||||||| |||||||    
T  12058628 catataatttgggacaaatatttt-ttctaaagcgacatacaatttgggacgga 12058576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 20605822 - 20605855
Alignment:
Q  30 aaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||| |||||||||||||||||||||||||||    
T  20605822 aaaacgtcatacaatttaggacggatggagtatt 20605855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29818242 - 29818182
Alignment:
Q  1 catataatttgggacaaatttt-ttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||| ||||| |||| ||||||||||||| ||||||| ||||||    
T  29818242 catataatttgggacaatttttgttctc-taaagcgacatacaatttgggacggagggagta 29818182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 34915584 - 34915522
Alignment:
Q  143 aaaatagtacatccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||| ||| |||||| ||||||||||||||||||||||       ||||||||||||||||    
T  34915584 aaaatactacctccgtccctaattataagacccttttgagaattttttttgtccctttttata 34915522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 78550 - 78602
Alignment:
Q  1 catataatttgggacaaattttttct-cctaaaacgacatacaatttaggacg 52  Q
    ||||||||||||||||| |||||| | |||||| ||||||||||||| |||||    
T  78550 catataatttgggacaatttttttttccctaaagcgacatacaatttgggacg 78602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9961374 - 9961315
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  9961374 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 9961315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 10196023 - 10195995
Alignment:
Q  154 tccgtctctaattataagacccttttgag 182  Q
    |||||||||||||||||||||||||||||    
T  10196023 tccgtctctaattataagacccttttgag 10195995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12499693 - 12499752
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| |||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  12499693 catataatttggaacaaatattttttc-taaagtgacatacaatttaggacggagggagta 12499752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12507022 - 12507081
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| |||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  12507022 catataatttggaacaaatattttttc-taaagtgacatacaatttaggacggagggagta 12507081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12509208 - 12509149
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| |||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  12509208 catataatttggaacaaatattttttc-taaagtgacatacaatttaggacggagggagta 12509149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 19097831 - 19097803
Alignment:
Q  154 tccgtctctaattataagacccttttgag 182  Q
    |||||||||||||||||||||||||||||    
T  19097831 tccgtctctaattataagacccttttgag 19097803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29017086 - 29017027
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| | | ||| ||||||| ||||| ||||||| ||||||    
T  29017086 catataatttgggacaaattttttttac-aaagcgacatataatttgggacggagggagta 29017027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32142434 - 32142375
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||| |||| || ||||| |||||||||||| ||||||| ||||||    
T  32142434 catacaatttgggacaaatattttttc-taaaatgacatacaatttgggacggagggagta 32142375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29027028 - 29026968
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  29027028 catataatttgggacaaattttttctcctaaagcgacatacaatttgggacggagggagta 29026968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 518524 - 518460
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| ||||||| ||||||||||    
T  518524 catataatttgggacaaattttttttcctaaggcgacatacaatttgggacggagggagtatttt 518460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1666981 - 1667041
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||| ||||||    
T  1666981 catataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 1667041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44421635 - 44421575
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||    
T  44421635 catataattcgggacaaattttttctcctaaagcaacatacaatttgggacggagggagta 44421575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6713945 - 6713883
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | ||||| | ||||||    
T  6713945 catataatttgggacaaattttttctactaaagcgacatacaatttggaacggaggaagtatt 6713883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14309127 - 14309188
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| ||||||||    
T  14309127 catataatttgggacaaatttttt-ttctaaagcgacatacaatttgggacggagggagtatt 14309188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2048220 - 2048285
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    ||||||||||||||||| |||||| | ||||| ||||||||||||| ||||||| |||||| ||||    
T  2048220 catataatttgggacaattttttttttctaaagcgacatacaatttgggacggagggagtactttt 2048285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22154235 - 22154295
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  22154235 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagtat 22154295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27863023 - 27863083
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  27863023 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagtat 27863083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3873633 - 3873693
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||| ||||||| ||||||    
T  3873633 catataatttgggacaaatatttttccctaaagcgacatacaatttgggacggagggagta 3873693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38959794 - 38959735
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  38959794 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 38959735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40425183 - 40425243
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||||||||  |||||| ||||||||||||| ||||||| ||||||    
T  40425183 catacaatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 40425243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4898350 - 4898413
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||||||  |||  |||||| ||||||||||||| ||||||| |||||||||    
T  4898350 catataatttgggacaaatacttttccctaaagcgacatacaatttgggacggagggagtattt 4898413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4945744 - 4945807
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||||||  |||  |||||| ||||||||||||| ||||||| |||||||||    
T  4945744 catataatttgggacaaatacttttccctaaagcgacatacaatttgggacggagggagtattt 4945807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5005245 - 5005305
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||| |||||||  ||||| ||||||||||||| ||||||| ||||||||    
T  5005245 catataatttgggacaatttttttc--ctaaagcgacatacaatttgggacggagggagtatt 5005305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16198451 - 16198390
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||| ||||||||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  16198451 catataatttgggataaattttttttcc-aaagcgacatacaatttgggacggagggagtatt 16198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 29843899 - 29843945
Alignment:
Q  17 aattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||    
T  29843899 aattttttttcctaaagtgacatacaatttaggacggatggagtatt 29843945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 11216649 - 11216589
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| |||||||||    
T  11216649 tataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtattt 11216589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12208362 - 12208411
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttagga 50  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||||||||||    
T  12208362 catataatttgggacaatttttttttcctaaagcgacgtacaatttagga 12208411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19576105 - 19576045
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||| ||||||||||||| |||||| |||||||    
T  19576105 catataatttgggacaaatattttttc-taaaatgacatacaatttaagacggagggagtat 19576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23494501 - 23494448
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||||||||||  ||||||  |||||||||||| |||||||    
T  23494501 catataatttgggacaaatttttttccctaaagtgacatacaatttgggacgga 23494448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19505855 - 19505916
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||| ||||||||||||||||||| ||  ||| ||||||||||||| ||||||||| |||||||    
T  19505855 catacaatttgggacaaattttttttc--aaagcgacatacaatttgggacggatgaagtattt 19505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28206630 - 28206689
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  28206630 catataatttgggacaaatattttttc-taaagtgacatacaatttaggacggagggagta 28206689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6027074 - 6027131
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||   ||||| ||||||||||||| ||||||| ||||||    
T  6027074 catataatttgggacaattttttt---ctaaagcgacatacaatttgggacggagggagta 6027131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 20727888 - 20727837
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  20727888 tccgtctctaattataagacccttttgagaattttttttgtccctttttata 20727837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31072638 - 31072699
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||| | ||||||||| || |||| ||||||||||||| ||||||| ||||||||    
T  31072638 catataatttggaaaaaattttttttc-taaagcgacatacaatttgggacggagggagtatt 31072699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44710056 - 44710118
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||  |||||||| |||||  |||||||||||| ||| ||| ||||||||    
T  44710056 catataatttgggacattttttttcttctaaagtgacatacaatttgggatggagggagtatt 44710118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5421492 - 5421432
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| || ||||| |||||||||||| ||||||| |||||||    
T  5421492 catacaatttgggacaaatattttttc-taaaatgacatacaatttgggacggagggagtat 5421432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8444220 - 8444280
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||| || ||| ||| | ||||||||||| ||||||| |||||||    
T  8444220 catataatttgggacaaatttattttcc-aaagcaacatacaatttgggacggagggagtat 8444280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14780925 - 14780968
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaattt 46  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  14780925 catataatttgggacaaatttttt-tcc-aaaacgacatacaattt 14780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22061038 - 22060978
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||    
T  22061038 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtat 22060978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27862751 - 27862691
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| ||||||| |||||| ||||||||| ||| | ||||| |||||||    
T  27862751 catataatttgggacaatttttttc-cctaaagcgacatacagtttggaacggagggagtat 27862691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 29027222 - 29027255
Alignment:
Q  30 aaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||| |||||||||||||||||||||||||||    
T  29027222 aaaacgtcatacaatttaggacggatggagtatt 29027255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34036157 - 34036096
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||| |||| |  ||||  |||||||||||||||||||| |||||||    
T  34036157 catacaatttgggacaaatatttttttttaaagtgacatacaatttaggacggagggagtat 34036096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35669745 - 35669693
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||||||||||| | |||||  |||||||||||| |||||||    
T  35669745 catataatttgggacaaatttttt-ttctaaagtgacatacaatttgggacgga 35669693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37985582 - 37985523
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  37985582 catataatttaggacaaatttttt-tcc-aaagcgacatacaatttgggacggagggagtat 37985523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41285826 - 41285886
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||| ||||| ||||| || |||| |||||||||||||  ||||||||||||||    
T  41285826 catataatttggaacaaactttttttc-taaagcgacatacaatttgagacggatggagtat 41285886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 43700969 - 43701006
Alignment:
Q  145 aatagtacatccgtctctaattataagacccttttgag 182  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  43700969 aatactacatccgtttctaattataagacccttttgag 43701006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1780348 - 1780297
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgg 53  Q
    ||||| |||||||||||||||||| || ||||  |||||||||||||||||||    
T  1780348 catatgatttgggacaaatttttt-tcataaagggacatacaatttaggacgg 1780297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6579759 - 6579700
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||| |||| || ||||| |||||||||||| | ||||||||||||    
T  6579759 catacaatttgggacaaatattttttc-taaaatgacatacaatttggaacggatggagta 6579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7491676 - 7491735
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||| || |||| || ||||| |||||||||||| ||||||| ||||||    
T  7491676 catataatttgggacacatattttttc-taaaatgacatacaatttgggacggagggagta 7491735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 8247361 - 8247420
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||| |||||| || |||||  | ||||||||||||||||| |||||||    
T  8247361 atataatttgggacaatttttttttc-taaaataatatacaatttaggacggagggagtat 8247420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21288910 - 21288851
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||||||||| | | ||| ||||||||||||| ||||||| ||||||    
T  21288910 catataatttaggacaaatttttttttc-aaagcgacatacaatttgggacggagggagta 21288851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22050690 - 22050749
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| ||||| |||||| || |||| |||||||||||||| |||||| ||||||    
T  22050690 catataatttgagacaatttttttttc-taaagcgacatacaatttaagacggagggagta 22050749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 22375242 - 22375301
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||  |||||| |||||||    
T  22375242 atataatttgggacaaattttttttcc-aaagcgacattcaatttgagacggagggagtat 22375301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30549792 - 30549851
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| |||| |||||| ||| ||||||||||||||||  ||||||| ||||||    
T  30549792 catataatttggaacaatttttttttcc-aaaacgacatacaattggggacggagggagta 30549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31909798 - 31909862
Alignment:
Q  1 catataatttgggacaaatttttt-ctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||| |||||| |||||| || |||||  |||||||||||| ||||||| |||||||||    
T  31909798 catataatttaggacaattttttttcttctaaagtgacatacaatttgggacggagggagtattt 31909862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 34113536 - 34113589
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  34113536 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 34113589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34504400 - 34504341
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||||||||| ||| ||| |||||||||||||  |||||| ||||||    
T  34504400 catataatttaggacaaattttttttcc-aaagcgacatacaatttgagacggagggagta 34504341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40483618 - 40483676
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| |||| |||||||| ||||||| ||||||    
T  40483618 catataatttgggacaaatttttt-tcc-aaagcgacgtacaatttgggacggagggagta 40483676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 40680732 - 40680785
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  40680732 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 40680785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43408326 - 43408264
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  43408326 catataatttgggacaaatattttctcctaaagcg-catacaatttaggacggatggagtattt 43408264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51571811 - 51571751
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  51571811 catataatttgggacaaatttttttccctaaagcgacatacaatttaggacggagggagta 51571751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8724338 - 8724277
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||    
T  8724338 catataatttgggacaaattttttttcc-aaaacgacatacaatttgggacggagggagtatt 8724277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9076225 - 9076164
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||    
T  9076225 catataatttgggacaaattttttttcc-aaaacgacatacaatttgggacggagggagtatt 9076164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49818337 - 49818277
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |||||||    
T  49818337 catataatttgggacaaattttttct-ctaaaacgacatataatttagaacggagggagtat 49818277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44035201 - 44035141
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||||||||||||||||| |||| |||||||| ||||||| ||||||    
T  44035201 catataatttaggacaaattttttctcctaaagcgacgtacaatttgggacggagggagta 44035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 51380247 - 51380310
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||||||    
T  51380247 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggaaggagtatttt 51380310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29674918 - 29674856
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||||||||||| |  |||||||||||||||||| ||||||| |||||||||    
T  29674918 catataatttgggacaaattttttttt-taaaacgacatacaatttgggacggaaggagtattt 29674856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 33610315 - 33610366
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  33610315 tataatttgggacaaatcttttctcctaaagcgacatacaatttgggacgga 33610366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 47498128 - 47498190
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||| ||||||| ||||||||||    
T  47498128 atataatttgggacaatttttttttcc-aaaacgacatacaatttgggacggagggagtatttt 47498190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23307835 - 23307775
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  23307835 catataatttgggacaa-ttttttcccctaaagcgacatacaatttgggacggagggagtat 23307775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39259317 - 39259265
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  39259317 catataatttgggacaaatttttt-tcctaaagcgacatacaatttgggacgga 39259265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43185403 - 43185343
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  43185403 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagtat 43185343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43600927 - 43600874
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| |||||||    
T  43600927 catataatttgggacaaatttttttccctaaagcgacatacaatttgggacgga 43600874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23513114 - 23513174
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||||| | ||||| ||||||    
T  23513114 catataatttgagacaaaatttttctcctaaagcgacatacaatttggaacggagggagta 23513174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 40501098 - 40501157
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  40501098 atataatttgggacaa-ttttttcccctaaagcgacatacaatttgggacggagggagtat 40501157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52870660 - 52870719
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  52870660 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagta 52870719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40710735 - 40710797
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||| |||| || |||| ||||||||||||| ||||||| |||||||||    
T  40710735 catataatttgggacaaatattttttc-taaagcgacatacaatttgggacggagggagtattt 40710797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 47109285 - 47109347
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||||||    
T  47109285 catataatttgggacaaatttttttttc-aaagcgacatacaatttgggacggagggagtattt 47109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37056675 - 37056613
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||| ||||| |||||| ||||||  |||||| ||||||||||||| ||||||||||||||||    
T  37056675 catacaattttggacaattttttttccctaaagcgacatacaatttgggacggatggagtatt 37056613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37331411 - 37331473
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||| ||| |||||||| |||||| |||||||||||||  |||||| ||||||||    
T  37331411 catataatttggaacacattttttcccctaaagcgacatacaatttgagacggaaggagtatt 37331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35084560 - 35084620
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||| ||||||| |||||||    
T  35084560 catataatttgggacaaatattttttc-taaaatgacatacaatttgggacggagggagtat 35084620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38483555 - 38483615
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| |||||||||||||||    
T  38483555 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggatggagtat 38483615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 49610169 - 49610229
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||| ||||||||||||||| || |||| ||||||||||||| ||||||| |||||||    
T  49610169 catataatctgggacaaattttttttc-taaagcgacatacaatttgggacggagggagtat 49610229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5925358 - 5925300
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  5925358 catataatttgg-acaaattttttc-cctaaagcgacatacaatttgggacggagggagta 5925300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13759861 - 13759920
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||| |||| |||| ||||||| ||||||||||||| ||||||| ||||||    
T  13759861 catataatttgggataaatatttt-tcctaaagcgacatacaatttgggacggagggagta 13759920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21272687 - 21272628
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||| ||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  21272687 catacaatttgagacaaattttttc-cctaaagcgacatacaatttgggacggagggagta 21272628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32078078 - 32078018
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| |   ||||||||||||||||| ||||||| ||||||    
T  32078078 catataatttgggacaaatattttttttcaaaacgacatacaatttgggacggagggagta 32078018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41265570 - 41265511
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||| ||||||| ||||||    
T  41265570 catataatttgggacaaattttttttcc-aaagggacatacaatttgggacggagggagta 41265511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 22926093 - 22926035
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  22926093 tataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtat 22926035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 43109649 - 43109591
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||||||||| | |||||||    
T  43109649 tataatttgggacaaattttttttcc-aaagcgatatacaatttaggacgaagggagtat 43109591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45218776 - 45218714
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||| |||||||| |||| || ||||| |||||||||||| ||||||||| |||||||    
T  45218776 catataatttaggacaaatattttttc-taaaatgacatacaatttgggacggatgaagtattt 45218714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23609456 - 23609517
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||| |||||||||||||| |||| || |||| ||||||||||||| ||||||| ||||||||    
T  23609456 catacaatttgggacaaatattttttc-taaagcgacatacaatttgggacggagggagtatt 23609517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30190382 - 30190321
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||| |||| || ||||  ||||||||||||  |||||||||||||||    
T  30190382 catataatttgggacaaatattttttc-taaagtgacatacaatttgagacggatggagtatt 30190321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38550933 - 38550872
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||| |||||| |||||| ||||||| ||||||||||||| |||||||  |||||||    
T  38550933 catataatttaggacaattttttt-tcctaaagcgacatacaattttggacggagagagtatt 38550872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38783664 - 38783725
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| ||||||||    
T  38783664 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtatt 38783725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38808146 - 38808084
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||| |||||| | | ||||||| ||||||||| ||||||| ||| ||||    
T  38808146 catataatttgggacaattttttttttccaaaacgatatacaatttgggacggagggaatatt 38808084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45824108 - 45824169
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| ||||||||    
T  45824108 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtatt 45824169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 46862400 - 46862345
Alignment:
Q  150 tacatccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  46862400 tacatccgtccctaattataagacccttttgagaattttttttgtccctttttata 46862345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 50647974 - 50647923
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  50647974 tccgtctctaattataagacccttttgagaaaaaattttgtccctttttata 50647923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34817127 - 34817187
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| ||| |||  |||||||||||| ||||||| |||||||    
T  34817127 catataatttgggacaatttttttttcc-aaagtgacatacaatttgggacggagggagtat 34817187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43599629 - 43599569
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||    
T  43599629 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtat 43599569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 46195656 - 46195619
Alignment:
Q  30 aaaacgacatacaatttaggacggatggagtattttta 67  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  46195656 aaaacgtcatacaatttaggacggagggagtattttta 46195619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48962791 - 48962851
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||  |||||||||||| |||| |||||||||||||||| ||| ||| |||||||    
T  48962791 catataatttatgacaaattttttttcct-aaacgacatacaatttgggatggagggagtat 48962851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 49102491 - 49102438
Alignment:
Q  2 atataatttgggacaaatttttt-ctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||| |||||| || | ||||||||||||||||| |||||||    
T  49102491 atataatttgggacaattttttttcttccaaaacgacatacaatttgggacgga 49102438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8096827 - 8096887
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| | |||||  |||||| ||||| ||||||| ||||||    
T  8096827 catataatttgggacaatttttttattctaaagtgacatataatttgggacggagggagta 8096887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 20862201 - 20862254
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  20862201 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 20862254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27942237 - 27942296
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| |||||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  27942237 catataatttaggacaaatattttttc-taaagtgacatacaatttaggacggagggagta 27942296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29756744 - 29756803
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||  ||||||| |||||| ||||||||||| | ||||||| ||||||    
T  29756744 catataatttgggacattttttttc-cctaaagcgacatacaatatgggacggagggagta 29756803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34663489 - 34663430
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  34663489 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 34663430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41751160 - 41751101
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  41751160 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 41751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 45404369 - 45404409
Alignment:
Q  141 acaaaatagtacatccgtctctaattataagacccttttga 181  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  45404369 acaatatactacatccgtccctaattataagacccttttga 45404409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47241221 - 47241162
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  47241221 catacaatttgggacaaatattttttc-taaagtgacatacaatttaggacggagggagta 47241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48333769 - 48333710
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  48333769 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 48333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54747930 - 54747989
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  54747930 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggaaggagta 54747989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 5e-18; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8050447 - 8050385
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  8050447 catataatttaggacaaattttttcccctaaagcgacatacaatttaggacggagggagtatt 8050385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5288905 - 5288845
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  5288905 catataatttgagacaaattttttcccctaaaacgacatacaatttgggacggagggagta 5288845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35288174 - 35288112
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||| ||||||| ||||||||    
T  35288174 catataatttgagacaaatattttctcttaaaacgacatacaatttgggacggagggagtatt 35288112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35809449 - 35809511
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| ||||||| | ||||||    
T  35809449 catataatttgggacaaattttttctcctaaagcaacatacaatttgggacggaggaagtatt 35809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22510459 - 22510399
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||    
T  22510459 catataatttgggacaaattttttttcc-aaaacgacatacaatttgggacggagggagtat 22510399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32706790 - 32706730
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||    
T  32706790 catataatttgggacaaattttttttcc-aaaacgacatacaatttgggacggagggagtat 32706730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38394349 - 38394409
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||    
T  38394349 catataatttgggacaaattttttttcc-aaaacgacatacaatttgggacggagggagtat 38394409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29665373 - 29665314
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||    
T  29665373 catataatttgggacaaatattttttcc-aaaacgacatacaatttaggacggagggagta 29665314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40555128 - 40555067
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||| ||||||||    
T  40555128 catataatttgggacaaatttttt-tccaaaaacgacatacaatttgggatggagggagtatt 40555067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41348956 - 41349017
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  41348956 catataatttggaacaaattttttctcc-aaagcgacatacaatttaggacggaggaagtatt 41349017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8035802 - 8035741
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| | | ||||||||||||||||| |||| || |||||||    
T  8035802 catataatttgggacaaatttttttttccaaaacgacatacaatttgggacagagggagtat 8035741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11247978 - 11247918
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| |||||||    
T  11247978 catataatttgggacaaatttttt-ttctaaagcgacatacaatttgggacggaaggagtat 11247918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5847027 - 5847086
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||| ||||||    
T  5847027 catataatttaggacaaattttttttcc-aaagcgacatacaatttaggacggagggagta 5847086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36302917 - 36302977
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||| ||||||| ||||||    
T  36302917 catataatttgggataaattttttcccctaaagcaacatacaatttgggacggagggagta 36302977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39527490 - 39527431
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||| ||||||    
T  39527490 catataatttgggacaaattttttttcc-aaagcgacatataatttaggacggagggagta 39527431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7458635 - 7458573
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| |||||||||    
T  7458635 catataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtattt 7458573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4890160 - 4890222
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||| ||||| | ||||||||||| | |||||  |||||||||||||||||||||||||||||    
T  4890160 catacaatttagaacaaatttttttttctaaagtgacatacaatttaggacggatggagtatt 4890222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4431571 - 4431511
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||||||| ||||||| |||||||    
T  4431571 catataatttgagacaaaatttttttcc-aaaacgacatacaatttgggacggagggagtat 4431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5070838 - 5070778
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||| ||||||||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  5070838 catataatttggaacaaattttttttcc-aaagcgacatacaatttgggacggagggagtat 5070778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9246084 - 9246032
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||    
T  9246084 catataatttgagacaaattttttctcc-aaagcgacatacaatttgggacgga 9246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13987605 - 13987545
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||| |||||||| ||||||| || |||||||||| ||||||| |||||||    
T  13987605 catataatttgggac-aattttttttcctaaagcggcatacaatttgggacggagggagtat 13987545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25538099 - 25538038
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| | |||||||||||  |||||| ||||||||||||| ||||||| |||||||    
T  25538099 catataatttagaacaaatttttttccctaaagcgacatacaatttgggacggagggagtat 25538038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33629952 - 33630012
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||| |||| || |||||||    
T  33629952 catataatttgggacaaattttttttcc-agaacgacatacaatttgggactgagggagtat 33630012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33877 - 33936
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  33877 catataatttgggacaaagtttttttcc-aaagcgacatacaatttgggacggagggagta 33936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10370606 - 10370547
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||| ||||||| ||||||    
T  10370606 catataatttgggacaaatattttttc-taaaatgacatacaatttgggacggagggagta 10370547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18026122 - 18026181
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||||| ||||||| ||||||    
T  18026122 catataatttgggacaaatattttttcc-aaagcgacatacaatttgggacggagggagta 18026181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24781187 - 24781246
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  24781187 catataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagta 24781246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27187435 - 27187494
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| ||| |||  |||||||||||||||||||| ||||||    
T  27187435 catataatttgggacaaatattttttcc-aaagtgacatacaatttaggacggagggagta 27187494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32833623 - 32833564
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||| || |||||||||| ||||||||||||||||| ||||||| ||||||    
T  32833623 catataatttaggataatttttttctcc-aaaacgacatacaatttgggacggagggagta 32833564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35584936 - 35584995
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| || |||| ||||||||||||| ||||||| ||||||    
T  35584936 catataatttgggacaatttttttttc-taaagcgacatacaatttgggacggagggagta 35584995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2914482 - 2914420
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||| ||||    
T  2914482 catataatttgggacaaatttttttttc-aaagcgacatacaatttgggacggagggaggattt 2914420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 13952216 - 13952274
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||| |||||||||||| ||| |||||| |||||||||| ||||||| |||||||    
T  13952216 tataatttgtgacaaatttttt-tcccaaaacgtcatacaatttgggacggagggagtat 13952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 181
Target Start/End: Complemental strand, 38372009 - 38371978
Alignment:
Q  150 tacatccgtctctaattataagacccttttga 181  Q
    ||||||||||||||||||||||||||||||||    
T  38372009 tacatccgtctctaattataagacccttttga 38371978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2620264 - 2620324
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||||||||    
T  2620264 catataatttgtgacaattttttt-tcc-aaagcgacatacaatttaggacggaaggagtatt 2620324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13662434 - 13662496
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||| |||||||||||||||||||  ||||||||||||||| ||||  || ||| ||||||||    
T  13662434 catacaatttgggacaaatttttttccctaaaacgacatacgatttgagatggagggagtatt 13662496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13978447 - 13978508
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||| ||||||| |||||| |||| || ||||  |||||||||||||||||||||||||||||    
T  13978447 catacaatttggaacaaatattttttc-taaagtgacatacaatttaggacggatggagtatt 13978508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 19282666 - 19282723
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||| |||||||||||| | ||||| ||||||||||||| ||||||| ||||||    
T  19282666 tataatttgagacaaatttttt-tgctaaagcgacatacaatttgggacggagggagta 19282723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39932869 - 39932809
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  39932869 catataatttgggacaattttttt-tcc-aaagcgacatacaatttgggacggagggagtatt 39932809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 440067 - 440119
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||    
T  440067 catataatttgggacaatttttttttcc-aaagcgacatacaatttgggacgga 440119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4744763 - 4744712
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  4744763 catataatttgggacaaatttttt-tcc-aaagcgacatacaatttgggacgga 4744712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8542819 - 8542759
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||    
T  8542819 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggaaggagtat 8542759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9591413 - 9591361
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||| |||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  9591413 catacaatttgagacaaatttttt-tcctaaagcgacatagaatttaggacgga 9591361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12659066 - 12659006
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||| |||||||| |||| || ||||||| ||||| ||||||| |||||||    
T  12659066 catataatttgggac-aattttttttcctgaagcgacatataatttgggacggagggagtat 12659006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13102931 - 13102878
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||| |||| |||| | ||||||| | |||||||||||||||||||    
T  13102931 catataatttggaacaatttttctttcctaaagcaacatacaatttaggacgga 13102878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 13510605 - 13510665
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||||||||||||| |||| ||| || ||||| ||||||| | |||||||    
T  13510605 tataatttgggacaaattttttctcc-aaaatgacttataatttgggacggaggtagtattt 13510665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 21780586 - 21780526
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||||||||||||||||||||||||| |||| ||| || ||||| ||||||| ||| |||||    
T  21780586 tataatttgggacaaattttttctcc-aaaatgacttataatttgggacggagggaatattt 21780526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29619440 - 29619500
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| |||||||    
T  29619440 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagtat 29619500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32292512 - 32292452
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||| ||| ||||||||| ||| ||| |||||||    
T  32292512 catataatttgggacaaattttttttcc-aaagcgatatacaatttgggatggagggagtat 32292452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34900223 - 34900284
Alignment:
Q  1 catataatttgggacaaattttttctc-ctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| |  | ||||||||||||||||| ||||||| ||||||    
T  34900223 catataatttgggacaatttttttttttccaaaacgacatacaatttgggacggagggagta 34900284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 590361 - 590420
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||| | |||||||||||| ||||| |||| || ||||||    
T  590361 catataatttgggacaatttttttc-cttaaaacgacatataatttgggaccgagggagta 590420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4456452 - 4456393
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  4456452 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 4456393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7363320 - 7363379
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  7363320 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 7363379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9201188 - 9201129
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||| |||||| |||| || ||||  |||||||||||||||||||| ||||||    
T  9201188 catataatttggaacaaatattttttc-taaagtgacatacaatttaggacggagggagta 9201129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 9641076 - 9641029
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggac 51  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||| ||||    
T  9641076 tataatttgggacaaattttttttcc-aaagcgacatacaatttgggac 9641029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13032958 - 13032898
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||  |||| |||| | ||||||| | ||||||||||||||||||| ||||||    
T  13032958 catataatttgaaacaatttttctttcctaaagcaacatacaatttaggacggagggagta 13032898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 16153287 - 16153234
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  16153287 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 16153234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 19712539 - 19712480
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||| ||||||||||||| ||| ||| ||||||||||||| ||||||| | ||||||    
T  19712539 tataatttaggacaaattttttttcc-aaagcgacatacaatttgggacggaggcagtatt 19712480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21195259 - 21195317
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  21195259 catataatttgggacaaaattttt-tcc-aaagcgacatacaatttgggacggagggagta 21195317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26256358 - 26256298
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| || |  |||||| | ||||| ||||||||||||||||||||| ||||||    
T  26256358 catataatttgagagatttttttttttctaaagcgacatacaatttaggacggaaggagta 26256298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 27366457 - 27366516
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||| |||||| || |||| ||||||||||||| | ||||| |||||||    
T  27366457 atataatttgggacaatttttttttc-taaagcgacatacaatttggaacggagggagtat 27366516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28024621 - 28024562
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| ||||| ||||||| |||||| ||||||||||||| ||||| | ||||||    
T  28024621 catataatttgagacaatttttttc-cctaaagcgacatacaatttgggacgtagggagta 28024562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 31657683 - 31657719
Alignment:
Q  145 aatagtacatccgtctctaattataagacccttttga 181  Q
    |||| |||||||||| |||||||||||||||||||||    
T  31657683 aatactacatccgtccctaattataagacccttttga 31657719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35189236 - 35189177
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||| |||||||||||||| |||| || ||||| |||||||||||| ||||||| ||||||    
T  35189236 catacaatttgggacaaatattttttc-taaaatgacatacaatttgggacggagggagta 35189177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36487342 - 36487299
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatt 45  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||    
T  36487342 catacaatttgggacaaattttttttcc-aaaacgacatacaatt 36487299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42940825 - 42940761
Alignment:
Q  1 catataatttgggacaaat-tttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    |||| |||||||||||||| ||||| | |||||  |||||||||||| ||||||| |||||||||    
T  42940825 catacaatttgggacaaatattttttttctaaagtgacatacaatttgggacggagggagtattt 42940761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15953 - 16014
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||    
T  15953 catataatttgggacaaattttttcccctaaagcgacatacaatttagggcggagggagtat 16014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1458 - 1519
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||| ||||||||| |||||||  ||||| ||||||||||||| || |||| |||||||    
T  1458 catataagttgggacaatttttttcctctaaagcgacatacaatttggggcggagggagtat 1519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 151699 - 151638
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||    
T  151699 catataatttgggacaaatattttctcctaaagcgacatacaatttgggacggagggagtat 151638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 40020360 - 40020299
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||    
T  40020360 atataatttgggacaaattttttctcctaaagcgacatacaatttgagacggaaggagtatt 40020299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29410308 - 29410374
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatttttat 68  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||| ||||||    
T  29410308 catataatttgggacaaatttttt-tcctaaagcgacatacaatttgggacggaaggagtagttttat 29410374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43073953 - 43074014
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||| ||||||| |||||||    
T  43073953 catataatttgggacaaattttttcccctaaagcaacatacaatttgggacggagggagtat 43074014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 46578666 - 46578613
Alignment:
Q  9 ttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  46578666 ttgggacaaattttttctcctaaagcaacatacaatttgggacggatggagtat 46578613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47988426 - 47988487
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| ||||||||||||||||||||| |||| |||||||| ||||||| |||||||    
T  47988426 catataatttaggacaaattttttctcctaaagcgacctacaatttgggacggagggagtat 47988487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24302813 - 24302873
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||||| ||||||| ||||||    
T  24302813 catataatttgggataaattttttctcctaaagcgagatacaatttgggacggaaggagta 24302873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36669750 - 36669809
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||    
T  36669750 catataatttgggacaaattttttttcc-aaaacgacatacaatttgggacggagggagta 36669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41887793 - 41887852
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||    
T  41887793 catataatttgggacaatttttttc-cctaaagcgacatacaatttaggacggagggagta 41887852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30264486 - 30264427
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagt 60  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||    
T  30264486 catataatttgggacaaatattttttcctaaagcgacatacaatttgggacggagggagt 30264427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28703602 - 28703541
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| || |||| ||||||||||||| ||||||| ||||||||    
T  28703602 catataatttgggacaaattttttttc-taaagcgacatacaatttgggacggagggagtatt 28703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31502867 - 31502806
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| ||||||||    
T  31502867 catataatttgggacaaatatttt-tcctaaagcgacatacaatttgggacggagggagtatt 31502806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32467866 - 32467805
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||||| || |||| ||||||||||||| ||||||| ||||||||    
T  32467866 catataatttgggacaaattttttttc-taaagcgacatacaatttgggacggagggagtatt 32467805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22326748 - 22326809
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||| |||||||||||  |||||| ||||||||||||| ||||||| |||||||    
T  22326748 catataatttggaacaaatttttttccctaaagcgacatacaatttgggacggagggagtat 22326809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12804441 - 12804381
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||| ||||| | ||||||    
T  12804441 catataatttaggacaaattttttctcctaaagcaacatacaatttgggacgcagggagta 12804381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21849871 - 21849930
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||| ||||||||||||||    
T  21849871 catataatttgagacaatttttttttcctaaagcgacatacaattt-ggacggatggagta 21849930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 31466105 - 31466046
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  31466105 tataatttgggacaaattttttttcc-aaagcgacatacaatttgggacggagggagtatt 31466046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42584555 - 42584615
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| |||||| |||||| ||||||| ||||||||||||| ||||||| ||||||    
T  42584555 catataatttaggacaatttttttttcctaaagcgacatacaatttgggacggagggagta 42584615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 27116636 - 27116694
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||||    
T  27116636 atataatttgggacaaatttttt-ttctaaagcgacatataatttaggacggagggagta 27116694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33616437 - 33616376
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||| ||| ||| ||||||||    
T  33616437 catataatttgagacaaattttttttcc-aaaacgacatacaatttgggatggagggagtatt 33616376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3458555 - 3458615
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| || |||| ||||||||||||| ||||||| |||||||    
T  3458555 catataatttgggacaatttttttttc-taaagcgacatacaatttgggacggagggagtat 3458615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3945190 - 3945129
Alignment:
Q  1 catataatttgggacaaattttttct-cctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||  |||||||| |||||| ||||||||||||| ||||||| ||||||    
T  3945190 catataatttgggacattttttttcttcctaaagcgacatacaatttgggacggagggagta 3945129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22369563 - 22369502
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||| ||| |||||  |||||| ||||||||||||| ||||||| |||||||    
T  22369563 catataatttgggagaaaattttttccctaaagcgacatacaatttgggacggagggagtat 22369502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30803343 - 30803291
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  30803343 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacgga 30803291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40537003 - 40537063
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||| ||||||| |||||||    
T  40537003 catataatttgggacaaattttttttcc-aaagcgacatataatttgggacggagggagtat 40537063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41877759 - 41877698
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||| |||||||||||  |||||| ||||||| ||||| ||||||| |||||||    
T  41877759 catataatttggaacaaatttttttccctaaagcgacatataatttgggacggaaggagtat 41877698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27059761 - 27059812
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgg 53  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||    
T  27059761 catataatttgggacaaattttttttcc-aaagcgacatacaatttgggacgg 27059812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28586994 - 28586935
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| ||||||| ||||||| ||||| ||||||| ||||||    
T  28586994 catataatttgggacaaatatttt-tcctaaagcgacatataatttgggacggagggagta 28586935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2849993 - 2850039
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaattta 47  Q
    |||||||||||||||| |||||||  |||||| ||||||||||||||    
T  2849993 catataatttgggacacatttttttccctaaagcgacatacaattta 2850039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4089315 - 4089256
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| ||||||   ||||| ||||||||||||| |||| ||||||||||    
T  4089315 catataatttgggacaatttttttt--ctaaagcgacatacaatttgggacagatggagtat 4089256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 6696844 - 6696906
Alignment:
Q  2 atataatttgggacaaatttttt-ctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||||||||||||||| |||||| || |||||  |||||||||||| ||||||| ||||||||    
T  6696844 atataatttgggacaattttttttcttctaaagtgacatacaatttgggacggaaggagtatt 6696906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25651209 - 25651270
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtatt 63  Q
    |||| |||||||||||||| |||| || ||||  |||||||||||||||||||| ||||||||    
T  25651209 catacaatttgggacaaatattttttc-taaagtgacatacaatttaggacggagggagtatt 25651270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 36916723 - 36916666
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||| |  ||||| |||||||||||||||||||| ||||||    
T  36916723 tataatttgggacaaatattttttt-taaaatgacatacaatttaggacggagggagta 36916666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37115791 - 37115729
Alignment:
Q  1 catataatttgggacaaat-tttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| |||||||| ||||| | |||||  |||||||||||||||||||| |||||||    
T  37115791 catataatttaggacaaatattttttttctaaagtgacatacaatttaggacggagggagtat 37115729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22918232 - 22918172
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||    
T  22918232 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtat 22918172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23059129 - 23059069
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||||| |||| || ||||  |||||||||||| ||||||| |||||||    
T  23059129 catataatttgggacaaatattttttc-taaagtgacatacaatttgggacggagggagtat 23059069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28472290 - 28472350
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||| |||||| |||| ||  |||||||||||||||||||| |||||||    
T  28472290 catacaatttgggacaattttttt-tcctcaagtgacatacaatttaggacggagggagtat 28472350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29669331 - 29669271
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| |||||| |||||| ||| ||| ||||||||||||| ||||||| |||||||    
T  29669331 catataattttggacaatttttttttcc-aaagcgacatacaatttgggacggagggagtat 29669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37798107 - 37798044
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    |||||||||||||||||||||||| | |||||  |||||||||||| ||||||| |||||| ||||    
T  37798107 catataatttgggacaaatttttt-ttctaaagtgacatacaattt-ggacggagggagtactttt 37798044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38074560 - 38074496
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    |||| |||||||||||| ||||||||| ||||  |||||||||||| | ||||| |||||||||||    
T  38074560 catacaatttgggacaatttttttctc-taaagtgacatacaatttggaacggagggagtattttt 38074496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40704448 - 40704388
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||| |||||||||||| ||| ||| ||| ||||||||| ||||||| |||||||    
T  40704448 catataatttgagacaaattttttttcc-aaagcgatatacaatttgggacggagggagtat 40704388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8565984 - 8566047
Alignment:
Q  1 catataatttgggacaaattttttctcc--taaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||| |||||| |||||| |||  |||| ||||||||||||| ||||||| |||||||    
T  8565984 catataatttaggacaatttttttttcccgtaaatcgacatacaatttgggacggagggagtat 8566047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9417825 - 9417884
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| ||||||||||||| ||| |||  |||||||||||| ||||||| ||||||    
T  9417825 catataatttaggacaaattttttttcc-aaagtgacatacaatttgggacggagggagta 9417884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 10316607 - 10316555
Alignment:
Q  2 atataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||||||||| ||||||  | |||| ||||||||||||| |||||||    
T  10316607 atataatttgggacaagtttttttccttaaagcgacatacaatttgggacgga 10316555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 11647866 - 11647813
Alignment:
Q  152 catccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||||    
T  11647866 catccgtccctaattataagacccttttgagaattttttttgtccctttttata 11647813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12263709 - 12263650
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||| |||||| |||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  12263709 catataatttaggacaatttttttttcc-aaagcgacatacaatttgggacggaaggagta 12263650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16875885 - 16875945
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||  |||||||||||| ||||||| |  |||||||||| ||||||| ||||||    
T  16875885 catataatttatgacaaattttttttcctaaagcagcatacaatttgggacggagggagta 16875945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18975998 - 18975938
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| ||||||||||||   ||||| ||||||||||||| |||| || ||||||    
T  18975998 catataatttgagacaaatttttttctctaaagcgacatacaatttgggacagaaggagta 18975938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 27119085 - 27119133
Alignment:
Q  17 aattttttctcctaaaacgacatacaatttaggacggatggagtatttt 65  Q
    |||||||| || |||||||||||||||||| |||| || ||||||||||    
T  27119085 aattttttttcataaaacgacatacaatttgggacagagggagtatttt 27119133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28536983 - 28537042
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||| ||||||| |||| || ||||| |||||||||||| ||||||| ||||||    
T  28536983 catataatttgagacaaatattttttc-taaaatgacatacaatttgggacggagggagta 28537042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1292 - 1352
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||| ||||||    
T  1292 catataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 1352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 188811 - 188871
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||||||||| ||||||    
T  188811 catataatttgggacaattttttttccctaaagcgacatacaatttaggacggagggagta 188871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 187550 - 187518
Alignment:
Q  30 aaaacgacatacaatttaggacggatggagtat 62  Q
    |||||| ||||||||||||||||||||||||||    
T  187550 aaaacgtcatacaatttaggacggatggagtat 187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6123 - 6186
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||| ||||||||||||  |||||| ||||||||||||||||| ||| |||||||||    
T  6123 catataatttgagacaaatttttttccctaaagcgacatacaatttaggatggagggagtattt 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45640 - 45578
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||||    
T  45640 catataatttgggacaatttttttc-cctaaagcgacatacaatttgggacggagggagtattt 45578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 17515 - 17457
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||||    
T  17515 tataatttgggacaaatttttttttc-aaagcgacatacaatttgggacggagggagtat 17457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3051 - 3116
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    ||||||||||||||||||||||||   ||||| |||||||||||||  |||||| |||||||||||    
T  3051 catataatttgggacaaatttttttcgctaaagcgacatacaatttgagacggagggagtattttt 3116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20727 - 20662
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattttt 66  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||  || ||| |||||||||||    
T  20727 catataatttgggacaatttttttttcctaaagcgacatacaatttgagatggagggagtattttt 20662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3370 - 3313
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggag 59  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||    
T  3370 catataatttgggacaatttttttc-cctaaagcgacatacaatttgggacggagggag 3313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11718 - 11779
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| | | ||| ||||||||||||| ||||||| |||||||    
T  11718 catataatttgggacaattttttttttccaaagcgacatacaatttgggacggagggagtat 11779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 16240 - 16285
Alignment:
Q  17 aattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||    
T  16240 aattttttttcctaaaacgacatacaattttggacggagggagtat 16285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13025 - 13086
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    ||||||||||||||||| |||||| | | ||| ||||||||||||| ||||||| |||||||    
T  13025 catataatttgggacaattttttttttccaaagcgacatacaatttgggacggagggagtat 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 276 - 320
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaattt 46  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||    
T  276 catataatttgggacaattttttt-tcctaaagcgacatacaattt 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18901 - 18962
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| |||||||||||||||||||  ||||||  |||||||||||| ||||||| |||||||    
T  18901 catacaatttgggacaaatttttttccctaaagtgacatacaatttgggacggagggagtat 18962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23570 - 23629
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  23570 catataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagta 23629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8495 - 8437
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  8495 catataatttgggacaaatttttt-tcc-aaagcgacatacaatttgggacggagggagta 8437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2983 - 2921
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtattt 64  Q
    ||||||||||||||||||||||||| ||| || |||| |||||||| |||| || |||||||||    
T  2983 catataatttgggacaaattttttc-cctgaagcgacgtacaatttgggactgagggagtattt 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 7652 - 7595
Alignment:
Q  3 tataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||| ||||||    
T  7652 tataatttgggacaatttttttttcc-aaagcgacatacaatttgggacggagggagta 7595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 31717 - 31666
Alignment:
Q  154 tccgtctctaattataagacccttttgagnnnnnnntttgtccctttttata 205  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||    
T  31717 tccgtctctaattataagacccttttgagaattttttttgtccctttttata 31666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7266 - 7213
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacgga 54  Q
    |||||||||| |||||| |||||| |   |||||||||||||||||||||||||    
T  7266 catataatttaggacaatttttttttttcaaaacgacatacaatttaggacgga 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4202 - 4263
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagtat 62  Q
    |||| ||||||  |||| |||||| ||||||| ||||||||||||| ||||||| |||||||    
T  4202 catacaatttgaaacaatttttttttcctaaagcgacatacaatttgggacggagggagtat 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 11244 - 11277
Alignment:
Q  30 aaaacgacatacaatttaggacggatggagtatt 63  Q
    ||||||||||||||||||||||||| ||||||||    
T  11244 aaaacgacatacaatttaggacggagggagtatt 11277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 98921 - 98862
Alignment:
Q  1 catataatttgggacaaattttttctcctaaaacgacatacaatttaggacggatggagta 61  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||| ||||||| ||||||    
T  98921 catataatttgggacaaatatttt-ttctaaagtgacatacaatttgggacggagggagta 98862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University