View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14446_high_4 (Length: 540)

Name: NF14446_high_4
Description: NF14446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14446_high_4
NF14446_high_4
[»] chr5 (38 HSPs)
chr5 (19-266)||(41688346-41688594)
chr5 (382-516)||(41688787-41688917)
chr5 (115-266)||(18843916-18844068)
chr5 (114-266)||(19579144-19579298)
chr5 (114-259)||(43235076-43235222)
chr5 (114-266)||(20321144-20321297)
chr5 (114-265)||(18051308-18051460)
chr5 (232-352)||(41688662-41688782)
chr5 (232-362)||(43234869-43235000)
chr5 (239-362)||(20923719-20923843)
chr5 (232-362)||(22645716-22645847)
chr5 (114-259)||(27339962-27340108)
chr5 (111-222)||(15051869-15051981)
chr5 (232-362)||(19578943-19579074)
chr5 (140-253)||(19042230-19042343)
chr5 (114-230)||(41427656-41427773)
chr5 (175-266)||(23172265-23172356)
chr5 (232-362)||(18051527-18051658)
chr5 (232-362)||(18843716-18843847)
chr5 (226-363)||(23172419-23172561)
chr5 (232-362)||(21059153-21059283)
chr5 (114-260)||(43005634-43005781)
chr5 (114-266)||(22645502-22645649)
chr5 (238-354)||(27340189-27340306)
chr5 (133-229)||(19377841-19377937)
chr5 (114-189)||(6852341-6852417)
chr5 (237-315)||(20320992-20321070)
chr5 (173-266)||(21058991-21059085)
chr5 (175-266)||(38158101-38158192)
chr5 (180-230)||(22984643-22984693)
chr5 (138-235)||(24648241-24648338)
chr5 (232-362)||(38158251-38158382)
chr5 (290-361)||(19042444-19042516)
chr5 (232-315)||(19979648-19979731)
chr5 (301-361)||(20320926-20320987)
chr5 (182-260)||(30799599-30799682)
chr5 (154-199)||(15446402-15446447)
chr5 (173-217)||(17624851-17624895)
[»] chr7 (67 HSPs)
chr7 (114-362)||(11326387-11326637)
chr7 (114-266)||(17811549-17811702)
chr7 (114-266)||(24989549-24989701)
chr7 (173-354)||(39182269-39182450)
chr7 (114-266)||(5715486-5715635)
chr7 (114-260)||(5058736-5058882)
chr7 (114-259)||(44944620-44944766)
chr7 (146-266)||(24725280-24725400)
chr7 (173-324)||(1977692-1977842)
chr7 (116-260)||(20570662-20570807)
chr7 (232-363)||(5058529-5058661)
chr7 (232-362)||(27221419-27221550)
chr7 (121-258)||(27221623-27221762)
chr7 (238-362)||(4247357-4247482)
chr7 (116-230)||(8304323-8304438)
chr7 (118-266)||(4247557-4247706)
chr7 (232-362)||(5715291-5715421)
chr7 (145-255)||(9685101-9685211)
chr7 (237-362)||(14055252-14055378)
chr7 (237-362)||(14365280-14365406)
chr7 (232-368)||(22687661-22687798)
chr7 (133-222)||(23618224-23618313)
chr7 (232-362)||(44944842-44944977)
chr7 (113-266)||(14055458-14055611)
chr7 (113-266)||(14365486-14365639)
chr7 (232-362)||(24990068-24990199)
chr7 (240-362)||(26281315-26281437)
chr7 (173-266)||(8329879-8329972)
chr7 (226-362)||(8330036-8330173)
chr7 (232-325)||(8346530-8346623)
chr7 (145-266)||(8572339-8572458)
chr7 (114-222)||(25842506-25842615)
chr7 (173-256)||(8329814-8329897)
chr7 (232-342)||(8343797-8343908)
chr7 (240-354)||(8571252-8571367)
chr7 (180-266)||(8343644-8343730)
chr7 (173-266)||(7730194-7730287)
chr7 (173-266)||(26565383-26565476)
chr7 (232-354)||(11324988-11325110)
chr7 (240-362)||(24725482-24725605)
chr7 (232-362)||(7730340-7730470)
chr7 (170-266)||(21846279-21846375)
chr7 (114-230)||(1981100-1981215)
chr7 (177-266)||(8346370-8346459)
chr7 (238-362)||(9685247-9685372)
chr7 (232-325)||(17811386-17811479)
chr7 (242-362)||(21846433-21846553)
chr7 (180-256)||(8346308-8346384)
chr7 (177-266)||(6916980-6917068)
chr7 (123-227)||(8629512-8629617)
chr7 (114-266)||(11325180-11325332)
chr7 (113-229)||(22687041-22687158)
chr7 (174-259)||(26617313-26617398)
chr7 (114-201)||(26281165-26281251)
chr7 (237-345)||(26617474-26617587)
chr7 (186-259)||(27509260-27509333)
chr7 (232-325)||(27509940-27510033)
chr7 (146-230)||(4574967-4575051)
chr7 (145-193)||(8253991-8254039)
chr7 (262-362)||(30294176-30294274)
chr7 (175-266)||(30294447-30294538)
chr7 (114-194)||(10285678-10285759)
chr7 (154-193)||(25842625-25842664)
chr7 (152-222)||(17741889-17741959)
chr7 (173-222)||(21157528-21157577)
chr7 (262-345)||(21157801-21157885)
chr7 (177-229)||(26340212-26340263)
[»] chr4 (46 HSPs)
chr4 (114-266)||(9770313-9770466)
chr4 (115-258)||(23064737-23064881)
chr4 (114-266)||(36121024-36121177)
chr4 (114-266)||(8010915-8011064)
chr4 (114-266)||(5375866-5376019)
chr4 (239-362)||(8011220-8011344)
chr4 (145-260)||(9911218-9911333)
chr4 (114-265)||(6346730-6346882)
chr4 (232-325)||(36120863-36120956)
chr4 (95-229)||(55476226-55476361)
chr4 (232-362)||(5361960-5362091)
chr4 (226-362)||(13023568-13023708)
chr4 (145-255)||(13551479-13551589)
chr4 (232-364)||(17466078-17466211)
chr4 (232-341)||(9911408-9911518)
chr4 (232-354)||(8889237-8889360)
chr4 (232-362)||(9770113-9770244)
chr4 (232-362)||(10142900-10143031)
chr4 (232-361)||(5375666-5375796)
chr4 (232-362)||(37240263-37240389)
chr4 (114-266)||(24719776-24719922)
chr4 (141-255)||(37240450-37240565)
chr4 (173-266)||(10143101-10143194)
chr4 (173-265)||(5361800-5361892)
chr4 (158-214)||(8367455-8367511)
chr4 (145-245)||(13023780-13023880)
chr4 (114-207)||(7045204-7045298)
chr4 (262-362)||(7044728-7044829)
chr4 (173-266)||(7044964-7045057)
chr4 (173-266)||(8889427-8889511)
chr4 (238-362)||(13551625-13551750)
chr4 (173-253)||(10394824-10394904)
chr4 (232-362)||(23064960-23065091)
chr4 (156-266)||(17466280-17466390)
chr4 (262-362)||(18459735-18459836)
chr4 (114-229)||(18459406-18459522)
chr4 (271-362)||(24719518-24719610)
chr4 (173-267)||(7452706-7452799)
chr4 (262-362)||(4156764-4156865)
chr4 (133-222)||(5943054-5943143)
chr4 (121-222)||(4157272-4157377)
chr4 (121-222)||(4157559-4157664)
chr4 (262-359)||(7815561-7815659)
chr4 (262-362)||(7452421-7452521)
chr4 (285-359)||(6347114-6347189)
chr4 (181-255)||(9149565-9149640)
[»] scaffold0016 (1 HSPs)
scaffold0016 (114-266)||(56200-56353)
[»] chr6 (54 HSPs)
chr6 (114-266)||(7223716-7223869)
chr6 (114-266)||(19748534-19748687)
chr6 (114-266)||(11327337-11327490)
chr6 (114-266)||(17103396-17103549)
chr6 (114-266)||(17543505-17543658)
chr6 (114-266)||(22498215-22498368)
chr6 (114-266)||(7918125-7918278)
chr6 (133-265)||(15527905-15528037)
chr6 (117-266)||(26053074-26053224)
chr6 (117-266)||(26073127-26073277)
chr6 (112-266)||(3573672-3573828)
chr6 (114-259)||(27233074-27233220)
chr6 (232-362)||(17250058-17250189)
chr6 (226-362)||(7918372-7918509)
chr6 (239-362)||(6943464-6943588)
chr6 (232-362)||(15528107-15528238)
chr6 (232-362)||(23897812-23897943)
chr6 (232-362)||(30912409-30912540)
chr6 (232-362)||(17543737-17543868)
chr6 (238-362)||(27233280-27233405)
chr6 (132-244)||(27614450-27614562)
chr6 (237-359)||(10509025-10509148)
chr6 (232-362)||(26053293-26053424)
chr6 (232-362)||(26073346-26073477)
chr6 (237-362)||(11327573-11327699)
chr6 (232-362)||(7223520-7223644)
chr6 (114-266)||(17250257-17250411)
chr6 (118-266)||(23898012-23898160)
chr6 (226-360)||(2912239-2912373)
chr6 (232-354)||(19748342-19748465)
chr6 (114-230)||(27890623-27890740)
chr6 (119-218)||(31108404-31108504)
chr6 (232-354)||(22498882-22499005)
chr6 (173-258)||(2912096-2912181)
chr6 (174-266)||(4841665-4841757)
chr6 (232-362)||(21354749-21354872)
chr6 (114-266)||(30912181-30912334)
chr6 (114-200)||(21354942-21355029)
chr6 (174-218)||(8275366-8275410)
chr6 (117-229)||(33583444-33583557)
chr6 (232-362)||(17103203-17103327)
chr6 (210-266)||(10508889-10508945)
chr6 (272-354)||(18491074-18491157)
chr6 (151-230)||(20432406-20432485)
chr6 (170-222)||(1179069-1179122)
chr6 (173-230)||(4596688-4596745)
chr6 (262-343)||(4841946-4842026)
chr6 (272-325)||(18490998-18491051)
chr6 (145-230)||(33592958-33593042)
chr6 (287-354)||(3573984-3574052)
chr6 (279-362)||(5422792-5422876)
chr6 (117-207)||(23506102-23506193)
chr6 (154-193)||(27890582-27890621)
chr6 (123-171)||(17372533-17372581)
[»] chr1 (54 HSPs)
chr1 (115-266)||(21846050-21846202)
chr1 (114-362)||(14074258-14074498)
chr1 (114-362)||(41032548-41032798)
chr1 (114-266)||(9351838-9351991)
chr1 (116-260)||(16125232-16125377)
chr1 (232-361)||(19009943-19010073)
chr1 (114-266)||(25146543-25146697)
chr1 (114-266)||(13100391-13100544)
chr1 (114-266)||(23528857-23529010)
chr1 (145-256)||(19009755-19009866)
chr1 (133-266)||(9954828-9954961)
chr1 (118-266)||(17869529-17869678)
chr1 (147-266)||(9128647-9128766)
chr1 (232-362)||(9955032-9955163)
chr1 (114-266)||(18304593-18304739)
chr1 (114-266)||(17055695-17055847)
chr1 (232-362)||(23528657-23528788)
chr1 (232-361)||(12513283-12513413)
chr1 (232-362)||(13276263-13276394)
chr1 (232-359)||(13100195-13100323)
chr1 (232-362)||(9327212-9327343)
chr1 (114-253)||(30619156-30619294)
chr1 (226-354)||(16125446-16125578)
chr1 (116-266)||(47786059-47786209)
chr1 (116-222)||(17197306-17197413)
chr1 (232-365)||(42180062-42180196)
chr1 (240-362)||(25146773-25146896)
chr1 (116-232)||(12002638-12002753)
chr1 (232-325)||(17869747-17869840)
chr1 (238-362)||(21846271-21846396)
chr1 (118-260)||(16434718-16434859)
chr1 (240-362)||(18304815-18304939)
chr1 (240-362)||(9128845-9128968)
chr1 (238-362)||(9352066-9352191)
chr1 (147-266)||(42179880-42179992)
chr1 (120-232)||(8773503-8773613)
chr1 (146-256)||(32881531-32881641)
chr1 (232-343)||(17055996-17056108)
chr1 (276-362)||(12800622-12800709)
chr1 (114-213)||(27502130-27502230)
chr1 (182-260)||(13276112-13276188)
chr1 (153-211)||(9321550-9321608)
chr1 (198-266)||(27917232-27917300)
chr1 (289-362)||(30619076-30619150)
chr1 (114-166)||(9954771-9954824)
chr1 (114-259)||(12513486-12513625)
chr1 (232-276)||(32881415-32881459)
chr1 (152-191)||(12002751-12002790)
chr1 (147-229)||(22789421-22789503)
chr1 (301-362)||(34478836-34478898)
chr1 (233-266)||(9327109-9327142)
chr1 (198-263)||(18228468-18228533)
chr1 (152-193)||(8773464-8773505)
chr1 (262-362)||(18337549-18337649)
[»] chr8 (51 HSPs)
chr8 (114-266)||(7489058-7489211)
chr8 (114-266)||(11879801-11879954)
chr8 (114-266)||(11897217-11897370)
chr8 (118-259)||(45403238-45403379)
chr8 (116-250)||(5922265-5922400)
chr8 (114-266)||(24414062-24414215)
chr8 (232-361)||(15294672-15294802)
chr8 (232-361)||(15475041-15475171)
chr8 (113-266)||(17647198-17647352)
chr8 (145-325)||(15231763-15231943)
chr8 (231-345)||(3094249-3094364)
chr8 (147-266)||(19704266-19704385)
chr8 (145-259)||(32424542-32424655)
chr8 (114-266)||(29384087-29384240)
chr8 (239-362)||(5922050-5922174)
chr8 (232-362)||(11879601-11879732)
chr8 (232-362)||(11897017-11897148)
chr8 (159-266)||(15294870-15294977)
chr8 (159-266)||(15475239-15475346)
chr8 (237-362)||(45403030-45403156)
chr8 (232-361)||(19704452-19704583)
chr8 (113-260)||(23142381-23142529)
chr8 (145-226)||(16752264-16752345)
chr8 (246-362)||(17646994-17647111)
chr8 (232-325)||(29384314-29384406)
chr8 (123-222)||(2040364-2040464)
chr8 (114-229)||(40541595-40541711)
chr8 (232-315)||(23142224-23142307)
chr8 (232-362)||(27836461-27836592)
chr8 (145-222)||(7262007-7262084)
chr8 (238-351)||(22910205-22910319)
chr8 (232-325)||(6810861-6810953)
chr8 (145-266)||(6811021-6811141)
chr8 (173-266)||(15761193-15761286)
chr8 (232-359)||(31424167-31424295)
chr8 (153-220)||(27836114-27836181)
chr8 (147-252)||(17566313-17566418)
chr8 (232-359)||(6292339-6292467)
chr8 (114-261)||(22909979-22910126)
chr8 (114-259)||(31424375-31424518)
chr8 (289-362)||(477101-477175)
chr8 (196-266)||(8582244-8582314)
chr8 (117-259)||(24056348-24056491)
chr8 (232-294)||(32424402-32424464)
chr8 (114-202)||(19335241-19335329)
chr8 (154-193)||(2040315-2040354)
chr8 (238-359)||(7489286-7489409)
chr8 (260-362)||(15761464-15761567)
chr8 (225-266)||(27836351-27836392)
chr8 (154-191)||(40541714-40541751)
chr8 (270-345)||(24056603-24056679)
[»] chr3 (60 HSPs)
chr3 (114-266)||(28745977-28746130)
chr3 (114-255)||(24619972-24620114)
chr3 (114-266)||(29067478-29067630)
chr3 (117-266)||(39428104-39428258)
chr3 (158-266)||(20756223-20756331)
chr3 (114-230)||(8592174-8592291)
chr3 (239-356)||(21963436-21963554)
chr3 (239-356)||(21985872-21985990)
chr3 (232-362)||(8156127-8156259)
chr3 (237-348)||(22494783-22494895)
chr3 (232-362)||(29067285-29067416)
chr3 (121-221)||(3041469-3041570)
chr3 (114-266)||(22355841-22355990)
chr3 (232-362)||(20756040-20756171)
chr3 (155-226)||(22971050-22971121)
chr3 (232-362)||(28745771-28745902)
chr3 (114-266)||(17064508-17064661)
chr3 (114-266)||(25870097-25870250)
chr3 (232-363)||(3449289-3449420)
chr3 (114-266)||(3449085-3449238)
chr3 (238-354)||(30727694-30727811)
chr3 (239-362)||(22137279-22137403)
chr3 (114-258)||(27090645-27090796)
chr3 (114-222)||(8560232-8560341)
chr3 (114-230)||(20766676-20766793)
chr3 (145-266)||(27676637-27676758)
chr3 (114-215)||(18014243-18014345)
chr3 (159-256)||(28135973-28136070)
chr3 (232-354)||(17064330-17064453)
chr3 (148-266)||(6136379-6136497)
chr3 (168-266)||(13286145-13286243)
chr3 (118-203)||(13006089-13006174)
chr3 (232-362)||(24620197-24620331)
chr3 (232-362)||(24649685-24649817)
chr3 (147-230)||(19348790-19348873)
chr3 (114-220)||(41671426-41671533)
chr3 (113-266)||(10872489-10872643)
chr3 (232-325)||(39427941-39428034)
chr3 (173-257)||(8155964-8156048)
chr3 (117-230)||(21553671-21553784)
chr3 (133-193)||(30727654-30727714)
chr3 (114-259)||(9152761-9152905)
chr3 (262-362)||(15806533-15806633)
chr3 (173-266)||(42697049-42697142)
chr3 (260-363)||(28135722-28135826)
chr3 (232-291)||(42696920-42696979)
chr3 (117-266)||(22137478-22137628)
chr3 (232-289)||(22356049-22356106)
chr3 (270-362)||(27676357-27676450)
chr3 (114-177)||(24649524-24649588)
chr3 (173-260)||(17796774-17796859)
chr3 (173-260)||(19105214-19105299)
chr3 (154-193)||(8560351-8560390)
chr3 (154-193)||(18014187-18014226)
chr3 (154-193)||(19348749-19348788)
chr3 (154-193)||(21553786-21553825)
chr3 (270-359)||(17796272-17796362)
chr3 (270-359)||(19104712-19104802)
chr3 (154-191)||(8592293-8592330)
chr3 (154-190)||(20766795-20766831)
[»] chr2 (41 HSPs)
chr2 (113-265)||(1404985-1405138)
chr2 (114-266)||(20063924-20064077)
chr2 (114-258)||(19262091-19262236)
chr2 (114-266)||(30433016-30433169)
chr2 (118-266)||(31237755-31237904)
chr2 (113-259)||(25538919-25539066)
chr2 (124-222)||(27523881-27523980)
chr2 (121-232)||(20034004-20034116)
chr2 (114-229)||(21869096-21869212)
chr2 (232-362)||(1404784-1404915)
chr2 (114-264)||(8428425-8428576)
chr2 (232-362)||(31237974-31238105)
chr2 (114-230)||(974575-974693)
chr2 (240-361)||(25539231-25539353)
chr2 (232-363)||(35565951-35566083)
chr2 (237-362)||(20063715-20063841)
chr2 (237-362)||(23863323-23863449)
chr2 (114-222)||(7302027-7302136)
chr2 (146-222)||(34578134-34578210)
chr2 (232-362)||(36429849-36429980)
chr2 (232-361)||(31578007-31578136)
chr2 (173-256)||(16766996-16767079)
chr2 (159-266)||(36430049-36430156)
chr2 (114-230)||(19245826-19245943)
chr2 (232-362)||(30432420-30432551)
chr2 (173-266)||(15588690-15588782)
chr2 (146-266)||(13502481-13502601)
chr2 (238-325)||(19491896-19491982)
chr2 (173-266)||(35565789-35565885)
chr2 (263-362)||(1690790-1690890)
chr2 (261-325)||(31023262-31023326)
chr2 (232-354)||(15588847-15588969)
chr2 (154-193)||(34578085-34578124)
chr2 (176-266)||(1690566-1690656)
chr2 (301-362)||(15516625-15516687)
chr2 (110-207)||(34167548-34167646)
chr2 (152-193)||(20034114-20034155)
chr2 (177-265)||(27406993-27407081)
chr2 (261-362)||(17995056-17995158)
chr2 (265-345)||(16766728-16766809)
chr2 (173-222)||(27749344-27749393)
[»] scaffold0186 (2 HSPs)
scaffold0186 (114-266)||(8642-8795)
scaffold0186 (232-362)||(8444-8575)
[»] scaffold0510 (1 HSPs)
scaffold0510 (156-362)||(22-229)
[»] scaffold0417 (2 HSPs)
scaffold0417 (151-266)||(7268-7383)
scaffold0417 (232-362)||(7452-7583)
[»] scaffold0603 (2 HSPs)
scaffold0603 (121-266)||(8741-8887)
scaffold0603 (264-325)||(9049-9110)
[»] scaffold0526 (2 HSPs)
scaffold0526 (114-230)||(8393-8510)
scaffold0526 (154-193)||(8352-8391)
[»] scaffold0079 (2 HSPs)
scaffold0079 (114-222)||(14701-14810)
scaffold0079 (154-193)||(14820-14859)
[»] scaffold0017 (1 HSPs)
scaffold0017 (114-222)||(38302-38410)
[»] scaffold0042 (2 HSPs)
scaffold0042 (173-266)||(93540-93633)
scaffold0042 (232-362)||(93703-93832)
[»] scaffold2084 (1 HSPs)
scaffold2084 (114-214)||(81-182)
[»] scaffold0534 (1 HSPs)
scaffold0534 (147-252)||(885-990)
[»] scaffold0061 (1 HSPs)
scaffold0061 (114-222)||(76084-76192)
[»] scaffold0027 (2 HSPs)
scaffold0027 (166-222)||(132943-132999)
scaffold0027 (154-204)||(133009-133058)
[»] scaffold0001 (1 HSPs)
scaffold0001 (170-230)||(142866-142926)
[»] scaffold0048 (3 HSPs)
scaffold0048 (173-260)||(48497-48584)
scaffold0048 (173-260)||(61149-61236)
scaffold0048 (261-362)||(48815-48916)
[»] scaffold0182 (2 HSPs)
scaffold0182 (145-207)||(24646-24708)
scaffold0182 (154-195)||(24580-24621)
[»] scaffold1178 (2 HSPs)
scaffold1178 (174-230)||(570-626)
scaffold1178 (199-258)||(607-664)
[»] scaffold0150 (2 HSPs)
scaffold0150 (173-229)||(33176-33232)
scaffold0150 (230-266)||(33204-33240)
[»] scaffold0028 (1 HSPs)
scaffold0028 (173-229)||(145826-145882)
[»] scaffold0036 (2 HSPs)
scaffold0036 (224-264)||(37011-37051)
scaffold0036 (270-362)||(37201-37294)


Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 41688346 - 41688594
Alignment:
Q  19 cttggcctgggaatggccatggtcaagactcaagagcaatgtttataatttctttaaacacgtgaggcattatttcttggttgttagtaattataaaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41688346 cttggcctgggaatggccatggtcaagactcaagagcaatgtttataatttctttaaacacgtgaggcattatttcttggttgttagtaattataaaggt 41688445  T
Q  119 tgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgt 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  41688446 tgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggacttttgt 41688545  T
Q  218 agaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41688546 agaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 41688594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 41688787 - 41688917
Alignment:
Q  382 ttatgatccttcatgattaagttataatttatattgtttctataaaaggggttgtagatgtagcacgaatttatacataaaattgagttgaatatagtat 481  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  41688787 ttatgatccttcatgattaagttataattaatattgttcctataaaaggggttgtagatgtagcacgaatttatacataaaattgagttgaatatag--- 41688883  T
Q  482 atatagtctgttgcgttaaaactcttgttgtctgt 516  Q
     ||||||||||||||||||||||||||||||||||    
T  41688884 -tatagtctgttgcgttaaaactcttgttgtctgt 41688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 115 - 266
Target Start/End: Complemental strand, 18844068 - 18843916
Alignment:
Q  115 aggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactt 213  Q
    |||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggactt 18843969  T
Q  214 ttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||| |||||    
T  18843968 ttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 18843916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 19579298 - 19579144
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaata-gcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    ||||| |||||||||||||||| |||| ||| ||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  19579298 aaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggac 19579199  T
Q  212 ttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  19579198 ttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggatttt 19579144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 43235222 - 43235076
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||| |||||||   |||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||    
T  43235222 aaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttactcaagaact 43235123  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||    
T  43235122 tttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgat 43235076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 20321297 - 20321144
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||| ||||||| ||| | ||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  20321297 aaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggact 20321198  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||| |||||    
T  20321197 tttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 20321144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 18051308 - 18051460
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||| ||||||||||||  || |||||||||||||||| ||| |||||| | |||||||    
T  18051308 aaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggact 18051407  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattt 265  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||    
T  18051408 tttgtagaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggattt 18051460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 232 - 352
Target Start/End: Original strand, 41688662 - 41688782
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcgaat 331  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||| | ||||||| |||||    
T  41688662 aaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatccgaat 41688761  T
Q  332 tttaggatttaagttgggatt 352  Q
    |||||||||||||||||||||    
T  41688762 tttaggatttaagttgggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 43235000 - 43234869
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||| ||||||||||||||| ||||| | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||    
T  43235000 aaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaa 43234901  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||||||||||| |||||||    
T  43234900 ttttaggatttaagttgggattttgacaacaa 43234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 239 - 362
Target Start/End: Complemental strand, 20923843 - 20923719
Alignment:
Q  239 aaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttagg 337  Q
    |||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  338 atttaagttgggattttaacaacaa 362  Q
    |||||||| |||||||| |||||||    
T  20923743 atttaagtcgggattttgacaacaa 20923719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 22645716 - 22645847
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||||||||||||||||||||||| |||| | ||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| | | |    
T  22645716 aaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaagaaagtcgcaaaatactgga 22645815  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  22645816 ttttaggatttaagtcgggattttgacaacaa 22645847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 27339962 - 27340108
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||| | ||||||| | |  ||||||||||||||||||||  | || | |||||||||||||||||||||||||||||||| |||||    
T  27339962 aaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggact 27340061  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||    
T  27340062 tttgtagaattgatataagaaatattaaaatcgcaatcaaaatcgat 27340108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 15051869 - 15051981
Alignment:
Q  111 ataaaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagg 209  Q
    ||||||||| |||||||||||| ||||||| | | ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15051869 ataaaggttatcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaagg 15051968  T
Q  210 acttttgtagaat 222  Q
    |||||||||||||    
T  15051969 acttttgtagaat 15051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 19579074 - 19578943
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||| | | |    
T  19579074 aaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctgga 19578975  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||| |||||||||||| ||||| |||||||    
T  19578974 ttttatgatttaagttggaattttgacaacaa 19578943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 19042230 - 19042343
Alignment:
Q  140 taggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgta 239  Q
    |||| ||||||| ||||||||||| ||||||| ||||||| |||| |||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||    
T  19042230 taggtcgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttgtagaatcgatataggaaattgta 19042329  T
Q  240 aaatcgcaatcaaa 253  Q
    ||||||||||||||    
T  19042330 aaatcgcaatcaaa 19042343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 41427773 - 41427656
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||| || |||||||   | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  41427773 aaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggact 41427674  T
Q  213 tttgtagaattgatatag 230  Q
    |||||||||| |||||||    
T  41427673 tttgtagaatcgatatag 41427656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 23172265 - 23172356
Alignment:
Q  175 aaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  23172265 aaatcgtaatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaatttt 23172356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 18051527 - 18051658
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| ||| |||||||||||||||||||| ||||||| |||||||| ||| |||||| ||||| |||| |||||| |||||||||||||||||| | | |    
T  18051527 aaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctata 18051626  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  18051627 ttttaggatttaagtcgggattttgacaacaa 18051658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 18843847 - 18843716
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||| ||| |||||||||||||||||||||||  |||||| ||||| ||| |||||||| |||| ||||||||||||||||||||||||| | |||    
T  18843847 aaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaa 18843748  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    || |||||||||||| || |||||||||||||    
T  18843747 ttataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 226 - 363
Target Start/End: Original strand, 23172419 - 23172561
Alignment:
Q  226 tatagaaaattgtaaaatcgcaatcaaaatcg----atgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgca 321  Q
    |||| ||||| |||||||||| ||||||||||    ||||||||||  |||||| ||||| ||||||||||||||||| |||||| ||||||||||||||    
T  23172419 tataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgca 23172518  T
Q  322 aaattc-gaattttaggatttaagttgggattttaacaacaaa 363  Q
    |||| |  ||||||||||||||||| |||||||| ||||||||    
T  23172519 aaatcctaaattttaggatttaagtcgggattttgacaacaaa 23172561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 21059153 - 21059283
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| |||||||||||||||||||||||||||||||| |||||  ||||| ||| |||||||| |||| ||||| ||||||||||||||||||| | | |    
T  21059153 aaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctaga 21059251  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||| | |||||||| |||||||    
T  21059252 ttttaggatttaaatcgggattttgacaacaa 21059283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 260
Target Start/End: Original strand, 43005634 - 43005781
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||||||  ||||||  ||||||| ||||| ||| |||  | |  |||||||||||||||||| ||| ||||||||||||   ||    
T  43005634 aaggttgtcaaaatcgggattttgctttagatcgaaaggaaatagaaaattcgaaaattgtaaaatcgcaatcaaaattgaaagattttactcaacttct 43005733  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    |||||||||| ||||||| |||| ||||||||||||| ||||||||||    
T  43005734 tttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatg 43005781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 22645502 - 22645649
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||| |||| | |||||||  || | ||||||||||||||||| | ||||| |||||| |||||||||||||||||||||||||||| ||||    
T  22645502 aaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttactcaaagact 22645601  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    | |  |      |||||| ||||||||||||| |||||||||||||||||||||    
T  22645602 tctaca------atataggaaattgtaaaatcacaatcaaaatcgatgaatttt 22645649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 27340189 - 27340306
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttag 336  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||| |||||| ||||| |||| |||||| ||||||||||||||||||    |||||||     
T  27340189 taaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttat 27340288  T
Q  337 gatttaagttgggatttt 354  Q
    ||||||||| ||||||||    
T  27340289 gatttaagtcgggatttt 27340306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 19377937 - 19377841
Alignment:
Q  133 tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatata 229  Q
    ||||||||| |  |||||||||||||||||||| || || |||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19377937 tttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 19377841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 6852341 - 6852417
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaa 189  Q
    ||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  6852341 aaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaattgcaatcaaaa 6852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 20321070 - 20320992
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaa 315  Q
    ||||||||||||||||| | ||||||||||   |||||| | |||||||||||||||| ||||||||||||||||||||    
T  20321070 gtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 21058991 - 21059085
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggatttt-actcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||| |||||||||| |||||| ||| ||  |||||||||||||| |||||  ||||| ||||||||||||||||||||||| |||||    
T  21058991 taaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggatttt 21059085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 38158101 - 38158192
Alignment:
Q  175 aaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||  || ||  ||||||||||||| |||||||||| |||| |||||    
T  38158101 aaatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggatttt 38158192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 22984643 - 22984693
Alignment:
Q  180 gcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  22984643 gcaatcaaaatcgaaggattttactcaaggaattttgtagaatcgatatag 22984693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 24648338 - 24648241
Alignment:
Q  138 tttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaat 235  Q
    |||||| |||||||||| || |||||||  | || |||||||| |||||||||| |||||||||||||||  |||||||||||||  ||||| |||||    
T  24648338 tttaggtcgaaagggaagagtaaaatcgaaaatcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatataaaaaat 24648241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 38158251 - 38158382
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| |||||||  ||| ||||||| ||| ||||||  |||||| ||||| |||| ||||||| |||  ||||| || |||||||||||||||| | | |    
T  38158251 aaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctaga 38158350  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| || ||||| |||||||    
T  38158351 ttttaggatttaagtcggaattttgacaacaa 38158382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  290 gatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttaggatttaagttgggattttaacaaca 361  Q
    ||||| |||| |||||||||||||||||| |||||| |  |||||||| ||||||||||||||||| ||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 19979731 - 19979648
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaa 315  Q
    |||| |||||||||||||||||||| ||| ||||||| | |||| ||||| ||| ||| |||| |||| |||||| ||||||||    
T  19979731 aaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 20320987 - 20320926
Alignment:
Q  301 ttgaaggtgaagaaagtcgcaaaat-tcgaattttaggatttaagttgggattttaacaaca 361  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| ||||||||||| ||||||    
T  20320987 ttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 30799682 - 30799599
Alignment:
Q  182 aatcaaaatcgaaggattttactcaaggacttttgtagaattgatata-----gaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    |||| ||||||||||||||||| |||  ||||||||||||| ||||||     ||||| |  ||||||||||||||||||||||    
T  30799682 aatcgaaatcgaaggattttacacaactacttttgtagaatcgatatatgatagaaaaatcgaaaatcgcaatcaaaatcgatg 30799599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 15446447 - 15446402
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggatt 199  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||    
T  15446447 atagcaaaatcgaaactcgtaaaatcgcaatcaaaatcgatggatt 15446402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 17624895 - 17624851
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgt 217  Q
    ||||||||||||||||||| || ||||||||||||  ||||||||    
T  17624895 taaaatcgcaatcaaaatcaaaagattttactcaactacttttgt 17624851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 114 - 362
Target Start/End: Complemental strand, 11326637 - 11326387
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||| | | |||| || |||  ||||| |||||||||||| ||||||| ||||||| |||||||||| |||| ||||||||||||||||    
T  11326637 aaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggact 11326538  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaag 312  Q
    ||||| ||||  |||||| ||||||||||||||||||||||||||||  ||||||| ||||||| |||| |||||||||||| ||||  |||||||||||    
T  11326537 tttgtggaatcaatataggaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaag 11326438  T
Q  313 aaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||| |  |||||||||||||||||||||||||| |||||||    
T  11326437 aaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaa 11326387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 17811702 - 17811549
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 17811603  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  17811602 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggatttt 17811549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 24989549 - 24989701
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  24989549 aaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggact 24989647  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||| |||||    
T  24989648 tttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatggatttt 24989701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 173 - 354
Target Start/End: Complemental strand, 39182450 - 39182269
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttat 272  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||| ||||||  ||||||||||||||||| ||||||||||| ||||||| |||    
T  39182450 taaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctat 39182351  T
Q  273 tttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-attttaggatttaagttgggatttt 354  Q
    ||| ||||| |||||||||||| |||| |||||||||||| |||||||||||| | | ||||||||||||||||  |||||||    
T  39182350 tttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaatcctagattttaggatttaagtcaggatttt 39182269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 5715635 - 5715486
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| |||||| |    ||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  5715635 aaggttgtcaaaatcgggactttactgt----cgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggact 5715540  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  5715539 tttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaatttt 5715486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 114 - 260
Target Start/End: Complemental strand, 5058882 - 5058736
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| ||  | |||||||||||||||||||| | || |||||| ||||||||||||||||||||||| ||||||| |    
T  5058882 aaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaat 5058783  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  5058782 tttgt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatg 5058736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 44944620 - 44944766
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| ||  ||||||| |||||||||  |||||||| |||||||||||| |||||||||  |||||||| |||||||    
T  44944620 aaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggact 44944719  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||    
T  44944720 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgat 44944766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 24725280 - 24725400
Alignment:
Q  146 gaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcg 245  Q
    |||||| |||||||| || || |||  ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  24725280 gaaaggaaatagcaatattggaacttttaaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcg 24725379  T
Q  246 caatcaaaatcgatgaatttt 266  Q
    ||||||||||||||| |||||    
T  24725380 caatcaaaatcgatggatttt 24725400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 173 - 324
Target Start/End: Complemental strand, 1977842 - 1977692
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttat 272  Q
    |||||||||||||||||||||||||||||||||||  | |||| |||||| ||||||  ||||  ||||||||||||||||||||| ||||||||| |||    
T  1977842 taaaatcgcaatcaaaatcgaaggattttactcaattattttt-tagaatcgatataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatat 1977744  T
Q  273 tttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaa 324  Q
    ||||||||| |||||||||||| |||| ||||||||| | ||| ||||||||    
T  1977743 tttaggattctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 116 - 260
Target Start/End: Original strand, 20570662 - 20570807
Alignment:
Q  116 ggttgtcaaaatcgggatt-tactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    ||||||||||||||||| | ||||| |||  ||||||||||| |||||| | ||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  20570662 ggttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttt 20570761  T
Q  215 tgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    |||||||| ||||||  ||||| ||||||| |||||||||||||||    
T  20570762 tgtagaatcgatataagaaattataaaatcacaatcaaaatcgatg 20570807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 5058661 - 5058529
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||  | ||||||| ||||||| |||| ||||||||||||| ||| ||||||||||||||| ||||||||||| |||    
T  5058661 aaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaa 5058562  T
Q  331 ttttaggatttaagttgggattttaacaacaaa 363  Q
    ||||||||||||||| |||||||| ||||||||    
T  5058561 ttttaggatttaagtcgggattttgacaacaaa 5058529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 27221550 - 27221419
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| |||||||  |||||| |||| ||||||| |||| |||| |||||| |||||||||||||||||| | |||    
T  27221550 aaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaa 27221451  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||||||||||||||||||||||    
T  27221450 ttttagaatttaagttgggattttaacaacaa 27221419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 121 - 258
Target Start/End: Complemental strand, 27221762 - 27221623
Alignment:
Q  121 tcaaaatcggga-tttacttt-aggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 218  Q
    |||||||||||| |||||||| ||| |||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||   ||||||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgta 27221663  T
Q  219 gaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    |||| ||| ||| |||||||||||||||||| ||||||||    
T  27221662 gaatcgatgtaggaaattgtaaaatcgcaattaaaatcga 27221623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 4247482 - 4247357
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||  ||||| |||||||||||  |||||| | |||||||||    
T  4247482 taaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttag 4247383  T
Q  337 gatttaagttgggattttaacaacaa 362  Q
    ||||||| |||||||||| |||||||    
T  4247382 gatttaaattgggattttgacaacaa 4247357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 8304438 - 8304323
Alignment:
Q  116 ggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    |||||||||||||| || ||||||| | | |||||| || ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  8304438 ggttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttt 8304339  T
Q  215 tgtagaattgatatag 230  Q
    ||||||||||||||||    
T  8304338 tgtagaattgatatag 8304323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 4247706 - 4247557
Alignment:
Q  118 ttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    |||||||||| |||| ||||||| | | ||||||||||||  ||||| |||| || |||||||||||||||| || |||||||||||||||||| |||||    
T  4247706 ttgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttttg 4247607  T
Q  217 tagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| ||||||  ||||  ||||||||||||||||||||||| |||||    
T  4247606 tagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggatttt 4247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 5715421 - 5715291
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||| |||||||||||||||||||||||||||||| | ||| ||||||| ||||||||  ||||||||| | ||||||||||||| | |||    
T  5715421 aaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaa 5715323  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  5715322 ttttaggatttaagtcgggattttgacaacaa 5715291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 9685101 - 9685211
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    ||||| ||||||||||||||  ||||| |||||||||||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||||| |||||||    
T  9685101 cgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgatttagaaaattttaaaatc 9685200  T
Q  245 gcaatcaaaat 255  Q
     ||||||||||    
T  9685201 acaatcaaaat 9685211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 14055378 - 14055252
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaatttta 335  Q
    |||||||||||||||||||| ||| ||||||| |||||||| ||| |||||| ||||| |||| ||||||||||||||||||||||||| | | ||||||    
T  14055378 gtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggatttta 14055279  T
Q  336 ggatttaagttgggattttaacaacaa 362  Q
    |||| ||||| |||||||| |||||||    
T  14055278 ggatataagtggggattttcacaacaa 14055252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 14365406 - 14365280
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaatttta 335  Q
    |||||||||||||||||||| ||| ||||||| |||||||| ||| |||||| ||||| |||| ||||||||||||||||||||||||| | | ||||||    
T  14365406 gtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggatttta 14365307  T
Q  336 ggatttaagttgggattttaacaacaa 362  Q
    |||| ||||| |||||||| |||||||    
T  14365306 ggatataagtggggattttcacaacaa 14365280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 232 - 368
Target Start/End: Original strand, 22687661 - 22687798
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| ||||||| |||||| ||||| | | |||||||| |||  |||||| |||||||||||||||| | | |||    
T  22687661 aaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaattcctgaa 22687760  T
Q  331 ttttaggatttaagttgggattttaacaacaaactcaa 368  Q
    ||||||||||||||| |||||||| ||||||| |||||    
T  22687761 ttttaggatttaagtcgggattttgacaacaatctcaa 22687798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 23618224 - 23618313
Alignment:
Q  133 tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    ||||||||| |  |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23618224 tttactttaagttgaaagggagtagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaat 23618313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 44944842 - 44944977
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaag----gtgaagaaagtcgcaaaattc 327  Q
    |||| |||||||| ||||||||||||||| ||||||  |||||||||||| |||||||||||| | || ||||||    ||||||||||||||||||| |    
T  44944842 aaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcc 44944941  T
Q  328 -gaattttaggatttaagttgggattttaacaacaa 362  Q
     |||||||||||||||||| |||||||| |||||||    
T  44944942 tgaattttaggatttaagtcgggattttgacaacaa 44944977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 113 - 266
Target Start/End: Complemental strand, 14055611 - 14055458
Alignment:
Q  113 aaaggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||  ||| ||| ||| |||||| ||  ||||||||||  | |  ||||||||||| |||||||||||||||||||||||  |||    
T  14055611 aaaggttgtcaaaatcggattttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactact 14055512  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||  ||||||  |||||| |||||||||||||||||| ||| |||||    
T  14055511 tttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggatttt 14055458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 113 - 266
Target Start/End: Complemental strand, 14365639 - 14365486
Alignment:
Q  113 aaaggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||  ||| ||| ||| |||||| ||  ||||||||||  | |  ||||||||||| |||||||||||||||||||||||  |||    
T  14365639 aaaggttgtcaaaatcggattttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactact 14365540  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||  ||||||  |||||| |||||||||||||||||| ||| |||||    
T  14365539 tttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggatttt 14365486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 24990068 - 24990199
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||| |||||||||||||||| ||||||| |||||||||||| |||||||||||| |||| ||| |||| ||||||||| |||||| |  ||    
T  24990068 aaatcgtaaaattgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaa 24990167  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||| |||||||||| || ||||| |||||||    
T  24990168 tttttggatttaagtcggaattttgacaacaa 24990199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 26281315 - 26281437
Alignment:
Q  240 aaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttagga 338  Q
    ||||||||| ||||||||||| |||||||||||||| | ||| ||| |||||||| |||| ||||||||||||||||||||||||| | |||||||| ||    
T  26281315 aaatcgcaa-caaaatcgatggattttgcttattttggaattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatga 26281413  T
Q  339 tttaagttgggattttaacaacaa 362  Q
    ||||||| || ||||| |||||||    
T  26281414 tttaagtcggaattttgacaacaa 26281437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 8329879 - 8329972
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  |||| ||||||| |||||||||||| ||| |||||    
T  8329879 taaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggatttt 8329972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 226 - 362
Target Start/End: Original strand, 8330036 - 8330173
Alignment:
Q  226 tatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||| ||||||||||||| |||||| ||||||||| | |||||| ||||| |||||||||||| | || |||||||||||||||||||||||||    
T  8330036 tataaaaaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaat 8330135  T
Q  326 -tcgaattttaggatttaagttgggattttaacaacaa 362  Q
       ||||||||| ||||| ||  ||||||| |||||||    
T  8330136 catgaattttagaatttaggtcaggattttgacaacaa 8330173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 8346530 - 8346623
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||||||||||| |||||||||| ||||| | |||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  8346530 aaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 8346623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 8572458 - 8572339
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    ||||||||||||| || || ||||||| |||| ||||||||||||||||| ||| ||| |||||||| |||||||||||||||||| ||||| ||||||     
T  8572458 cgaaagggaatagtaatattgggactcttaaa-tcgcaatcaaaatcgaaagatgttaatcaaggacatttgtagaattgatatag-aaattataaaatt 8572361  T
Q  245 gcaatcaaaatcgatgaatttt 266  Q
    |||||||||||| ||| |||||    
T  8572360 gcaatcaaaatcaatggatttt 8572339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 25842506 - 25842615
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| ||||||| |||| ||||||| | | ||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||| | |||    
T  25842506 aaggttatcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttactcatgaact 25842605  T
Q  213 tttgtagaat 222  Q
    ||||||||||    
T  25842606 tttgtagaat 25842615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 8329814 - 8329897
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatc 256  Q
    |||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  8329814 taaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatcaaaatc 8329897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 8343797 - 8343908
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||||||||| ||||| |||| ||||| | |||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||| | | |    
T  8343797 aaatcgtaaaatcgcaattaaaattgatggatttttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccagga 8343896  T
Q  331 ttttaggattta 342  Q
    ||||||||||||    
T  8343897 ttttaggattta 8343908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 240 - 354
Target Start/End: Complemental strand, 8571367 - 8571252
Alignment:
Q  240 aaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttagga 338  Q
    |||||||||||||||||||||  ||||   |||||||||||| |||||||||||| |||| || |||||||||||||||||||||| | | |||||| ||    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  339 tttaagttgggatttt 354  Q
    ||||||| ||||||||    
T  8571267 tttaagtcgggatttt 8571252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 8343644 - 8343730
Alignment:
Q  180 gcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||| || ||| |||||    
T  8343644 gcaatcaaaatcgaagtattttactcaactacttttgtagaattgatataaaaaatcgtaaaatcgcaatcaaagtcaatggatttt 8343730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 7730194 - 7730287
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||| |||||||||| | ||||||||||  ||||||||| ||||||||||  |||||||||||||||||||||||| |||| |||||    
T  7730194 taaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggatttt 7730287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 26565383 - 26565476
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||  ||||| ||||| ||||||| ||||||||||| |||| |||||    
T  26565383 taaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggatttt 26565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 11325110 - 11324988
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaa 330  Q
    |||| ||||| |||||||||||||  ||||||||||| |||||||| ||| || ||||||||| |||| ||||||||||||||| || ||||||   |||    
T  11325110 aaatcgtaaattcgcaatcaaaatt-atgaattttgcctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatgaa 11325012  T
Q  331 ttttaggatttaagttgggatttt 354  Q
    ||||||||||||||| ||||||||    
T  11325011 ttttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 24725482 - 24725605
Alignment:
Q  240 aaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttagga 338  Q
    |||||| ||||||||| |||| ||||||| ||||||  |||| |||||||||||| |||  ||||||||||||||||||| ||||| | | |||||||||    
T  24725482 aaatcgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttagga 24725581  T
Q  339 tttaagttgggattttaacaacaa 362  Q
    |||||||  ||||||| |||||||    
T  24725582 tttaagtctggattttgacaacaa 24725605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 7730340 - 7730470
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcgaat 331  Q
    |||| |||||||| ||||||||||||||| ||||| | |||||| | ||| |||| ||||||| |||  || |||||||||||||||||||||   | ||    
T  7730340 aaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtgaagaaagtcgcaaaacctggat 7730439  T
Q  332 tttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||  ||||||| |||||||    
T  7730440 tttaggatttaagtcaggattttgacaacaa 7730470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 21846279 - 21846375
Alignment:
Q  170 tcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||| |||||||||||||||||| ||||  |||||| |||||| ||||||  |||| |||||||| |||||||||| |||| |||||    
T  21846279 tcctaaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattgatggatttt 21846375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 1981100 - 1981215
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||| | | ||||||||| ||| ||||| || |||| |||||||| ||||||||||||||||  |||||||||| ||    
T  1981100 aaggttatcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaagga--ttactcaaggtct 1981197  T
Q  213 tttgtagaattgatatag 230  Q
    || ||||||| |||||||    
T  1981198 ttagtagaatcgatatag 1981215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 8346370 - 8346459
Alignment:
Q  177 atcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||||  ||||  ||||||| |||||| |||| ||| |||||    
T  8346370 atcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggatttt 8346459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 362
Target Start/End: Original strand, 9685247 - 9685372
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    |||||||||||| |||||||||| ||||||  ||||||   ||| || ||||||||| |||| ||||||||||| ||||||||||||| |  ||||||||    
T  9685247 taaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttag 9685346  T
Q  337 gatttaagttgggattttaacaacaa 362  Q
    ||| ||||| | |||||| |||||||    
T  9685347 gatataagtcgagattttgacaacaa 9685372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 17811479 - 17811386
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| |||||||||||||||||||||||  ||||||  |||||||  ||| |||||||||||| |||| ||||||||||| |||||| ||||||    
T  17811479 aaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaat 17811386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 362
Target Start/End: Original strand, 21846433 - 21846553
Alignment:
Q  242 atcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatt 340  Q
    ||||||||||||||||||  ||||| | | |||||| ||| |||||||||| | |||| ||||| ||||| ||||||||||||| | ||||||||| |||    
T  21846433 atcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatt 21846531  T
Q  341 taagttgggattttaacaacaa 362  Q
    ||||| |||||||| |||||||    
T  21846532 taagtcgggattttgacaacaa 21846553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 8346308 - 8346384
Alignment:
Q  180 gcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatc 256  Q
    |||| |||||||||||||||||||||||  |||||| |||||||||||||  |||| |||| |||||||||||||||    
T  8346308 gcaaacaaaatcgaaggattttactcaactacttttatagaattgatataagaaatcgtaatatcgcaatcaaaatc 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 6917068 - 6916980
Alignment:
Q  177 atcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||| ||||||||||||||||  |||||  || ||| ||||||  ||||| |||||| ||||||||||||||||||||||    
T  6917068 atcgcaatcaaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaatttt 6916980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 8629512 - 8629617
Alignment:
Q  123 aaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaa 221  Q
    |||||||||| || ||||||||  |||||||||||| ||||| ||||||| ||||| |||||||| ||||  ||  ||||||||||||| ||||||||||    
T  8629512 aaaatcgggacttcactttaggttgaaagggaatagtaaaattgggactcataaaaacgcaatcacaatcagagagttttactcaaggaattttgtagaa 8629611  T
Q  222 ttgata 227  Q
    | ||||    
T  8629612 tcgata 8629617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 11325332 - 11325180
Alignment:
Q  114 aaggttgtcaaaatcgggat-ttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| ||||| || ||| | | | |||| ||| ||||||||||  | || ||||||||||| |||| |  |||| ||||||||||  |||    
T  11325332 aaggttgtcaaaattgggatcttgcttcacgtcaaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaatttcaagggttttactcaactact 11325233  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    | |||| ||||||||||| ||||||||||||  ||||||||||||||| |||||    
T  11325232 tctgtaaaattgatatag-aaattgtaaaattacaatcaaaatcgatggatttt 11325180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 22687041 - 22687158
Alignment:
Q  113 aaaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    ||||||||| |||||||||||||  ||| ||  |||||| ||| |||||||||| || || ||||||| ||| |||||| |||| |||||||||||  ||    
T  22687041 aaaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaactac 22687140  T
Q  212 ttttgtagaattgatata 229  Q
    ||||||||||| ||||||    
T  22687141 ttttgtagaatcgatata 22687158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 26617313 - 26617398
Alignment:
Q  174 aaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    ||||||||||  ||| || ||||||||| |||||  | ||||||||||  |||||| |||||||||||||||||||||||||||||    
T  26617313 aaaatcgcaactaaattcaaaggattttgctcaattatttttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcgat 26617398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 26281165 - 26281251
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggatttt 201  Q
    ||||||||||||||| ||| ||||||||||| ||||| ||||||||||| || ||| || |||||||||||||||||| ||||||||||    
T  26281165 aaggttgtcaaaatcaggactttactttaggtcgaaaaggaatagcaaa-tcagga-tcgtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 345
Target Start/End: Original strand, 26617474 - 26617587
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgc--ttattttaggattttac--tatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaat 331  Q
    |||||||||||||||||||||||  |||||||   |||||||| ||| |||  |||| ||||| ||| ||||||||||| ||||||||||||| | ||||    
T  26617474 gtaaaatcgcaatcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaat 26617573  T
Q  332 tttaggatttaagt 345  Q
    ||||||||| ||||    
T  26617574 tttaggattaaagt 26617587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 27509260 - 27509333
Alignment:
Q  186 aaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    ||||| ||||||||||||||||  |||||| |||||| ||||||  |||||||||||||||||| ||| |||||    
T  27509260 aaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaattcgat 27509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 27509940 - 27510033
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||   ||| |||||| ||||| | || ||| | ||||||||| |||||||||    
T  27509940 aaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaagaaaatcgcaaaat 27510033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 4575051 - 4574967
Alignment:
Q  146 gaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    |||||||||||| ||||||   | || ||||||||||||||||||| ||| ||| |||||||  ||||||||||||| |||||||    
T  4575051 gaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgatatag 4574967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 8253991 - 8254039
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  8253991 cgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcga 8254039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 30294274 - 30294176
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaac 360  Q
    ||||||| ||||||  |||||| |||||||||| ||||   ||||||||| ||| || |||||| | | ||||||||||||||||||||||||| |||||    
T  30294274 attttgcctattttgagattttgctatggatttgagtc---gaaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaac 30294178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 30294538 - 30294447
Alignment:
Q  175 aaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||| |||||||||||||||||||||||| ||  |||||| |||||| |||| |  ||||  ||||||| |||||||| |||||| |||||    
T  30294538 aaatcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggatttt 30294447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 10285678 - 10285759
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaa 194  Q
    ||||||||||||||||||| ||||||| ||| |||||| ||| || ||||||   | || ||||||||||||||||||||||    
T  10285678 aaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatcgaa 10285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 25842625 - 25842664
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  25842625 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 25842664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 17741959 - 17741889
Alignment:
Q  152 gaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    ||||||||||||||  | || |||||| ||||||||||| ||||||||||||| ||  |||||| ||||||    
T  17741959 gaatagcaaaatcgaaaatcgtaaaattgcaatcaaaattgaaggattttacttaactacttttttagaat 17741889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 21157528 - 21157577
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    ||||||| |||||||||| ||||||||||| ||||  |||||||||||||    
T  21157528 taaaatctcaatcaaaattgaaggattttattcaactacttttgtagaat 21157577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 21157801 - 21157885
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagt 345  Q
    ||||| ||| |||||||||||| |||||||||| |||| ||| | ||||  ||||||||||||  | |||||||| |||||||||    
T  21157801 atttttcttgttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagt 21157885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 26340212 - 26340263
Alignment:
Q  177 atcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatata 229  Q
    ||||||||||||||||||| |||||||||||  |||||| |||||| ||||||    
T  26340212 atcgcaatcaaaatcgaagaattttactcaa-aacttttatagaatcgatata 26340263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 1e-64; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 9770466 - 9770313
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  9770466 aaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 9770367  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  9770366 tttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaatttt 9770313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 23064737 - 23064881
Alignment:
Q  115 aggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactt 213  Q
    |||||||||||||||||| ||||||| ||| |||||||||||| | ||||||| |||| |||||||||||||||||| ||||||||||| ||||||||||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggactt 23064836  T
Q  214 ttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||    
T  23064837 ttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcga 23064881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 36121177 - 36121024
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||  ||||||| | |  |||||||||||||  ||||||||||| |||||||| ||||||||||||| |||||||||||||||||    
T  36121177 aaggttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggact 36121078  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||||| |||||    
T  36121077 tttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 36121024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 8010915 - 8011064
Alignment:
Q  114 aaggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactt 213  Q
    ||||||||||||||||||| ||||   | | || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||    
T  8010915 aaggttgtcaaaatcgggacttac---aaggcggaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactattt 8011011  T
Q  214 ttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    || |||||| ||||||  ||||||||||||||||||||||||||||| |||||    
T  8011012 ttatagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatgtatttt 8011064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 5376019 - 5375866
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||| ||||||| ||| | |||   ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5376019 aaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 5375920  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    | ||||||||  |||||| ||||||||||||| ||||||||||||||| |||||    
T  5375919 tctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggatttt 5375866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 239 - 362
Target Start/End: Original strand, 8011220 - 8011344
Alignment:
Q  239 aaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttagg 337  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||    
T  8011220 aaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 8011319  T
Q  338 atttaagttgggattttaacaacaa 362  Q
    |||| |||||||||||| |||||||    
T  8011320 atttgagttgggattttgacaacaa 8011344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 9911218 - 9911333
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||| || ||||||||||||| ||||||  |||||||||||||    
T  9911218 cgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgtagaatcgatataagaaattgtaaaatc 9911317  T
Q  245 gcaatcaaaatcgatg 260  Q
    ||||||||||||||||    
T  9911318 gcaatcaaaatcgatg 9911333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 6346730 - 6346882
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||| | ||| ||| ||| |||||||||| ||||||||||  | || ||||||| |||||||||||||||||||||||||||  |||    
T  6346730 aaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactact 6346829  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattt 265  Q
    ||||||||||  |||||  ||||||||||||||||||||||||||||| ||||    
T  6346830 tttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 36120956 - 36120863
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||    
T  36120956 aaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaat 36120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 55476361 - 55476226
Alignment:
Q  95 ttggttgttagtaattataaaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||||  || |||| |||||| |||||||||||| ||||||| | | ||||||||| ||  |||||||| |||| |||||||||||||||||||||    
T  55476361 ttggttgttgatagttatcaaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcga 55476262  T
Q  194 aggattttactcaaggacttttgtagaattgatata 229  Q
    ||||||||||||||||||||||||||||| ||||||    
T  55476261 aggattttactcaaggacttttgtagaatcgatata 55476226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 5361960 - 5362091
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||| |||||||||||||||  |||||| |||||| | ||| |||||||||||| |||| |||||| |||||||||||||||||| | |||    
T  5361960 aaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaa 5362059  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  5362060 ttttaggatttaagtcgggattttgacaacaa 5362091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 226 - 362
Target Start/End: Complemental strand, 13023708 - 13023568
Alignment:
Q  226 tatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttatttta--ggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaa 323  Q
    |||| ||||| |||||||||||||||||||||||  |||||   ||||||   ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  13023708 tataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaa 13023609  T
Q  324 attcgaa--ttttaggatttaagttgggattttaacaacaa 362  Q
    || | ||  |||||||||||||||||||||||| |||||||    
T  13023608 atcctaaatttttaggatttaagttgggattttgacaacaa 13023568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 13551479 - 13551589
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    ||||| ||||||||||||||  ||||| |||||||||||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||||| |||||||    
T  13551479 cgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgatttagaaaattttaaaatc 13551578  T
Q  245 gcaatcaaaat 255  Q
     ||||||||||    
T  13551579 acaatcaaaat 13551589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 232 - 364
Target Start/End: Complemental strand, 17466211 - 17466078
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||| || ||||||||| |||| || ||| |||||||| ||||||||| |  ||    
T  17466211 aaatcgtaaaatcgcaatctaaatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaa 17466112  T
Q  331 ttttaggatttaagttgggattttaacaacaaac 364  Q
    ||||| |||||||||||| ||||| |||||||||    
T  17466111 ttttaagatttaagttggaattttgacaacaaac 17466078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 341
Target Start/End: Original strand, 9911408 - 9911518
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaa 330  Q
    |||| |||||||||||||||||||||||| |||||||  ||||||||||| ||||||||||||| | | ||||||||||||||||| ||||||| | |||    
T  9911408 aaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaa 9911507  T
Q  331 ttttaggattt 341  Q
    |||||||||||    
T  9911508 ttttaggattt 9911518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 8889360 - 8889237
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||| || |||| |||| |||| |||| |||||||||| || |||||| | | |    
T  8889360 aaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctgga 8889261  T
Q  331 ttttaggatttaagttgggatttt 354  Q
    ||||||||||||||| ||||||||    
T  8889260 ttttaggatttaagtcgggatttt 8889237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 9770244 - 9770113
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| ||||||||||||||||||| |||  ||||||  |||||||||||| |||||||||||| |||| ||||||||||| |||||| |||||| | | |    
T  9770244 aaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctaga 9770145  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||||| | ||||||||||||||    
T  9770144 ttttagaatttaagtcgagattttaacaacaa 9770113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 10143031 - 10142900
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaa 330  Q
    |||| |||||||| ||||||||||||||| ||||||  |||||| | ||| ||||||||| || |||||||||||||| ||||||||||||||| |  ||    
T  10143031 aaatcgtaaaatcacaatcaaaatcgatggattttgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaa 10142932  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||||| |||||||| |||||||    
T  10142931 ttttagaatttaagtcgggattttcacaacaa 10142900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 5375796 - 5375666
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaa 330  Q
    |||| ||||||||||||||||| |||||||||||||  |||||||  ||| || |||| |||| |||| ||||||||||||||||||||||||| |  ||    
T  5375796 aaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaa 5375697  T
Q  331 ttttaggatttaagttgggattttaacaaca 361  Q
    |||||| ||||| ||||||||||| ||||||    
T  5375696 ttttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 37240389 - 37240263
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcgaat 331  Q
    |||| |||||||||||||||||||||||||||| ||| |||||| || || |||||||||||| |||| ||||||||||| ||||||| ||      |||    
T  37240389 aaatcgtaaaatcgcaatcaaaatcgatgaattatgcctatttt-gggttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa---ctaaat 37240294  T
Q  332 tttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||| ||||||||||||||||    
T  37240293 tttaggatttaagtagggattttaacaacaa 37240263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 24719922 - 24719776
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||| |||||  ||| ||| |||||||||| ||||||||||        ||||||| ||||| |||||||||||||||||| |  |||    
T  24719922 aaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcga-------aaaatcgaaatcacaatcgaaggattttactcgattact 24719830  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||  |||| ||||||||||||||||||||||||| ||||    
T  24719829 tttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagtttt 24719776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 37240565 - 37240450
Alignment:
Q  141 aggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatataga-aaattgta 239  Q
    |||||||||| ||| ||| ||||||  | || |||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| | |||| |||    
T  37240565 aggacgaaagagaagagctaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatataaagaaatcgta 37240466  T
Q  240 aaatcgcaatcaaaat 255  Q
    ||||| ||||||||||    
T  37240465 aaatcacaatcaaaat 37240450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 10143194 - 10143101
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||||||||||||||||||| ||||  | ||||||||||| ||||||  | |||||||||||||||||||||| |||| |||||    
T  10143194 taaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggatttt 10143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 5361800 - 5361892
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattt 265  Q
    |||||| |||| |||||||||||| ||||||||||  ||||||||||||| ||||||  |||| ||||||||||||||||| |||||| ||||    
T  5361800 taaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgtaaaatcgcaatcaaagtcgatggattt 5361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 8367511 - 8367455
Alignment:
Q  158 caaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  8367511 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttt 8367455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 13023880 - 13023780
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    |||||| ||||||||||||||| |||| ||||||| ||||||| || ||| |||||||| |||||| ||||||| ||| ||||||| ||||| |||||||    
T  13023880 cgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacccaaggaattttgtaaaatcgatataggaaattttaaaatc 13023781  T
Q  245 g 245  Q
    |    
T  13023780 g 13023780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 7045298 - 7045204
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaa 207  Q
    |||||||||||||| || |||| |||| ||| |||||||||| |||||||||   | || |||||||||||||||||||||||||||||||||||    
T  7045298 aaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaa 7045204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 7044829 - 7044728
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttaggatttaagttgggattttaacaac 360  Q
    |||||||||||||| ||||| | |||||||||| |||| ||||||||||| ||||| |||||||   | |||||||||||||||| |||||||| |||||    
T  7044829 attttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgacaac 7044730  T
Q  361 aa 362  Q
    ||    
T  7044729 aa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 7045057 - 7044964
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||||||||||| ||||||||||||  ||||||| | ||| ||||||  |||| |||||||  ||||||||||||||| |||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggatttt 7044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 8889511 - 8889427
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||| |||||||||||||| ||||||||  |||||||||||||         |||||||||||||||||||||||||||||||||||    
T  8889511 taaaatcgcaaccaaaatcgaaggatcttactcaactacttttgtagaat---------aaattgtaaaatcgcaatcaaaatcgatgaatttt 8889427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 362
Target Start/End: Original strand, 13551625 - 13551750
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    |||||||||||| |||||||||| ||||||  ||||||   ||| || ||||||||| |||| ||||||||||| ||||||||||||| |  ||||||||    
T  13551625 taaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttag 13551724  T
Q  337 gatttaagttgggattttaacaacaa 362  Q
    ||| ||||| | |||||| |||||||    
T  13551725 gatataagtcgagattttgacaacaa 13551750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 10394904 - 10394824
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaa 253  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||| | ||||| |||| |||||||  ||||||||    
T  10394904 taaaatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatcaaa 10394824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 23064960 - 23065091
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||| ||||| |||||||||| ||||  | |||||||| ||| ||| |||||||| |||| ||||| |||||||||||  |||||| | | |    
T  23064960 aaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactgga 23065059  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||||| ||| ||||||||||||    
T  23065060 ttttagaatttaagtcggggttttaacaacaa 23065091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 17466390 - 17466280
Alignment:
Q  156 agcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaat 255  Q
    ||||||||||  | || |||||| |||| |||||| ||| |||| |||||||  |||||||| |||| ||||||  |||||||||||| |||||||||||    
T  17466390 agcaaaatcgacaatcgtaaaattgcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaat 17466291  T
Q  256 cgatgaatttt 266  Q
    ||||| |||||    
T  17466290 cgatggatttt 17466280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 18459735 - 18459836
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttaggatttaagttgggattttaacaac 360  Q
    ||||||| |||||||||||| | |||||||||| |||| ||||| ||||| | ||||||||||| | | |||||||||||| ||| |||||||| |||||    
T  18459735 attttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttacaac 18459834  T
Q  361 aa 362  Q
    ||    
T  18459835 aa 18459836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 18459406 - 18459522
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||| |||||  ||| |||  |||||| || ||||||||||  | || |||||||||||| ||||||||||||||| ||| ||  | |    
T  18459406 aaggttgtcaaaatcgagattttgcttcaggttgaaaggaaagagcaaaatcgacaatcgtaaaatcgcaattaaaatcgaaggatttgacttaactaat 18459505  T
Q  213 tttgtagaattgatata 229  Q
    |||||||||||||||||    
T  18459506 tttgtagaattgatata 18459522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 24719610 - 24719518
Alignment:
Q  271 attttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||| | |||||||||| |||| ||||||||||| ||||||||||||| | ||||||||| | |||||| | |||||| |||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaa 24719518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 7452799 - 7452706
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttg 267  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||  |||||  |||| |||||| | |||  |||||||||| ||||||    
T  7452799 taaaatcgcaatcaaaatcgaagga-tttactcaactacttttgtagaatcaatatacgaaatcgtaaaagcacaactaaaatcgatggattttg 7452706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 4156865 - 4156764
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaac 360  Q
    |||||||||||||||||||| |||||  ||||| |||| || |||||||| ||||||  ||||| |  ||||||| ||||||||| |||||||| |||||    
T  4156865 attttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaac 4156766  T
Q  361 aa 362  Q
    ||    
T  4156765 aa 4156764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 5943054 - 5943143
Alignment:
Q  133 tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    |||| |||||| |||||||||| |||||||||   | || |||||||||||  ||||| ||||||||||||||||  |||||||||||||    
T  5943054 tttattttaggtcgaaagggaagagcaaaatcaaaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaat 5943143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 4157377 - 4157272
Alignment:
Q  121 tcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcct---aaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    |||||||||||||||  ||||| | |||||||||| ||||||||||  | || |   |||||||||||||| |||||| ||||||||||||  |||||||    
T  4157377 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157278  T
Q  217 tagaat 222  Q
    ||||||    
T  4157277 tagaat 4157272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 4157664 - 4157559
Alignment:
Q  121 tcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcct---aaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    |||||||||||||||  ||||| | |||||||||| ||||||||||  | || |   |||||||||||||| |||||| ||||||||||||  |||||||    
T  4157664 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157565  T
Q  217 tagaat 222  Q
    ||||||    
T  4157564 tagaat 4157559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 7815659 - 7815561
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaa 359  Q
    ||||||| |||||| ||||| |||||||| ||| ||||  | ||| |||| |||||| |||||| | | |||||||||||||||| |||||||||||||    
T  7815659 attttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaacaa 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 7452521 - 7452421
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaac 360  Q
    ||||||| ||| |||||| |  |||||||||| | ||| ||||||||||| ||||| ||||||||| | ||||||| |||||||| |||||||| |||||    
T  7452521 attttgcctatattaggaatccactatggattga-gtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcacaac 7452423  T
Q  361 aa 362  Q
    ||    
T  7452422 aa 7452421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 6347114 - 6347189
Alignment:
Q  285 ctatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaa 359  Q
    |||||||||| |||| |||||||| || ||||| ||||||| | | ||||||||||||||||||| ||||| ||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaa 6347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 9149565 - 9149640
Alignment:
Q  181 caatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgt-aaaatcgcaatcaaaat 255  Q
    |||||||||| ||||||||||||||||  ||||| ||||||| ||||||  |||| || |||| ||||||||||||    
T  9149565 caatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaat 9149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 56200 - 56353
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||| || ||||||| ||| ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  56200 aaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggact 56299  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  56300 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 56353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 7223869 - 7223716
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  7223869 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggact 7223770  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| |||||||||||||||||||| |||| ||| |||||    
T  7223769 tttgtagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggatttt 7223716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 19748687 - 19748534
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| |||| || |||  ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  19748687 aaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 19748588  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  19748587 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 19748534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 11327337 - 11327490
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||  ||||||| |||  |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11327337 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 11327436  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||    
T  11327437 tttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggatttt 11327490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 17103549 - 17103396
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| | | |||||||||||| ||||||| |||||| ||||||||||||||| | ||||||||||||||||||||||    
T  17103549 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggact 17103450  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  17103449 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 17103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 17543505 - 17543658
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||| ||||| |||| ||||||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  17543505 aaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggact 17543604  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||||| |||||    
T  17543605 tttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggatttt 17543658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 22498215 - 22498368
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||| ||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||||||||| ||||    
T  22498215 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagact 22498314  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  22498315 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 22498368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 7918125 - 7918278
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||  ||||||| ||| ||||||||||||||| |||| |||||| |||||| |||||||||||||||| ||||||||||||||||    
T  7918125 aaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaaggact 7918224  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||| |||||    
T  7918225 tttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 7918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 133 - 265
Target Start/End: Original strand, 15527905 - 15528037
Alignment:
Q  133 tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaa 232  Q
    ||||||| ||| ||||||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  15527905 tttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatatagga 15528004  T
Q  233 aattgtaaaatcgcaatcaaaatcgatgaattt 265  Q
    |||||||||||||||||| ||||||||| ||||    
T  15528005 aattgtaaaatcgcaatcgaaatcgatggattt 15528037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 26053074 - 26053224
Alignment:
Q  117 gttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactttt 215  Q
    |||||||||||| ||| ||||||| ||| ||||||| ||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||| |||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26053173  T
Q  216 gtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||| |||||    
T  26053174 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggatttt 26053224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 26073127 - 26073277
Alignment:
Q  117 gttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactttt 215  Q
    |||||||||||| ||| ||||||| ||| ||||||| ||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||| |||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26073226  T
Q  216 gtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||| |||||    
T  26073227 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggatttt 26073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 112 - 266
Target Start/End: Original strand, 3573672 - 3573828
Alignment:
Q  112 taaaggttgtcaaaatcggga-tttactttaggacgaaa-gggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagg 209  Q
    ||||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||      
T  3573672 taaaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaact 3573771  T
Q  210 acttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||| ||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  3573772 actcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagtttt 3573828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 27233074 - 27233220
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||| |  ||||||| ||| | |||||||||  |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||    
T  27233074 aaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtct 27233173  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    || ||||||| | ||||||||||||||||||||||||||||||||||    
T  27233174 ttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcgat 27233220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 17250189 - 17250058
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||| ||||||||||| |||||| ||||| || |||||||||||||| ||||||||||||||||| ||||||| | | |    
T  17250189 aaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctgga 17250090  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| ||||||||||||||||    
T  17250089 ttttaggatttaagtcgggattttaacaacaa 17250058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 226 - 362
Target Start/End: Original strand, 7918372 - 7918509
Alignment:
Q  226 tatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||| | |||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  7918372 tataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatggatttaagtcgttgaaggtgaaaaaagtcgcaaaat 7918471  T
Q  326 tc-gaattttaggatttaagttgggattttaacaacaa 362  Q
     | ||||||||| |||||||| |||||||| |||||||    
T  7918472 cctgaattttagaatttaagtcgggattttgacaacaa 7918509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 239 - 362
Target Start/End: Original strand, 6943464 - 6943588
Alignment:
Q  239 aaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttagg 337  Q
    |||||||||||||||||||||||||||||  ||||||  |||| |||||| ||||| |||| ||||||||||||||||||||||||| | ||||||||||    
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  338 atttaagttgggattttaacaacaa 362  Q
    |||||||| |||||||| |||||||    
T  6943564 atttaagtcgggattttgacaacaa 6943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 15528107 - 15528238
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||| ||||||||| ||||||  ||||||| |||| ||||||| ||||||||| || |||||||||||||||||||||| | |||    
T  15528107 aaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaa 15528206  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  15528207 ttttaggatttaagtcgggattttgacaacaa 15528238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 23897943 - 23897812
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| |||| || |||||||| |||||||||||||||| |||| ||||| ||||||||||||||||||| | | |    
T  23897943 aaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgca 23897844  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| ||||| ||| ||||||    
T  23897843 ttttaggatttaagtcgggatcttatcaacaa 23897812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 30912409 - 30912540
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||| ||| ||||||| ||||||  |||| || ||||||||| |||| ||||||||||||||||||||||||| |  ||    
T  30912409 aaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaa 30912508  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||||||||||| |||||||    
T  30912509 ttttaggatttaagttgggattttgacaacaa 30912540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 17543737 - 17543868
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||| ||  ||||||||||||||| |||| |||||||||||| |||| ||||| ||||| ||||||||||||| | |||    
T  17543737 aaatagtaaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaa 17543836  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| | |||||| |||||||    
T  17543837 ttttaggatttaagtcgagattttgacaacaa 17543868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 238 - 362
Target Start/End: Original strand, 27233280 - 27233405
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    ||||||||||||||||||||||| ||||||  |||||| ||||| ||||||||||||||||| |||||||||||||||||| |||||| | | |||||||    
T  27233280 taaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttag 27233379  T
Q  337 gatttaagttgggattttaacaacaa 362  Q
    ||||||||| || | ||| |||||||    
T  27233380 gatttaagtcggtagtttgacaacaa 27233405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 244
Target Start/End: Original strand, 27614450 - 27614562
Alignment:
Q  132 atttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatataga 231  Q
    |||||||| ||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||  ||||||   ||||||     
T  27614450 atttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttactcaatgacttgagtagaaacaatatagg 27614549  T
Q  232 aaattgtaaaatc 244  Q
    |||||||||||||    
T  27614550 aaattgtaaaatc 27614562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 359
Target Start/End: Original strand, 10509025 - 10509148
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaatttta 335  Q
    ||||||||| |||||||||||||||||||||| |||||| ||||| ||||||  |||| |||||||||| |||||||||||| |||| ||| ||||||||    
T  10509025 gtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtgaagaaagtcacaaatttctgaatttta 10509124  T
Q  336 ggatttaagttgggattttaacaa 359  Q
    ||||||||||  ||||||| ||||    
T  10509125 ggatttaagtctggattttgacaa 10509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 26053293 - 26053424
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| |||||||  |||||||||| |||| |||||||||||||| ||||| || |||| |||| |||||||||||||||||||||||||||||| | | |    
T  26053293 aaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctaga 26053392  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||| ||||||||| |||||||| |||||||    
T  26053393 ttttaagatttaagtcgggattttgacaacaa 26053424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 26073346 - 26073477
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| |||||||  |||||||||| |||| |||||||||||||| ||||| || |||| |||| |||||||||||||||||||||||||||||| | | |    
T  26073346 aaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctaga 26073445  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||| ||||||||| |||||||| |||||||    
T  26073446 ttttaagatttaagtcgggattttgacaacaa 26073477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 362
Target Start/End: Original strand, 11327573 - 11327699
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaa-ttcgaatttta 335  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||| |||||| ||||||||  |||||||  | | ||||||    
T  11327573 gtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggatttta 11327672  T
Q  336 ggatttaagttgggattttaacaacaa 362  Q
    || ||||||| |||||||| |||||||    
T  11327673 ggttttaagtcgggattttgacaacaa 11327699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 7223644 - 7223520
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| |||||||||||||| | ||| |||||||||||||||       ||||||||||||||||||||| |  ||    
T  7223644 aaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag-------aggtgaagaaagtcgcaaaatcctaaa 7223552  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  7223551 ttttaggatttaagtcgggattttgacaacaa 7223520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 17250411 - 17250257
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatc--gaaggattttactcaagga 210  Q
    |||||| |||||||||||| ||||||| ||| ||||||| ||| || || | ||||||| ||||||||||||||||||   ||||||||||||||||||     
T  17250411 aaggttatcaaaatcgggactttacttcaggtcgaaaggaaatggcgaatt-gggactcgtaaaatcgcaatcaaaataaagaaggattttactcaaggt 17250313  T
Q  211 cttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||| ||||||| |  ||||||||||||||| |||||||||||||| ||| |||||    
T  17250312 ctttagtagaatcgccatagaaaattgtaaattcgcaatcaaaatcaatggatttt 17250257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 23898160 - 23898012
Alignment:
Q  118 ttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    ||||||||||||||||||  ||| ||| |||| | ||| ||||||||||  | || |||||||| || |||||||||||||||||||||||  ||||| |    
T  23898160 ttgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactacttt-g 23898062  T
Q  217 tagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| ||||||  ||||||||||||| ||||||||||||||| |||||    
T  23898061 tagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggatttt 23898012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 2912239 - 2912373
Alignment:
Q  226 tatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||| ||||| | || |||||| || ||||||| |||||||    
T  2912239 tataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttgaagatggagaaagttgcaaaat 2912337  T
Q  326 tc-gaattttaggatttaagttgggattttaacaac 360  Q
     |  ||||||| ||||||||| |||||||| |||||    
T  2912338 cctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 19748465 - 19748342
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||| |||| ||||| |||||| ||||||| |||||||||||| || |||||| | | |    
T  19748465 aaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctgga 19748366  T
Q  331 ttttaggatttaagttgggatttt 354  Q
    || || ||||||||| ||||||||    
T  19748365 ttgtaagatttaagtcgggatttt 19748342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 27890740 - 27890623
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||| ||| || ||||||| | |  |||||||| ||| ||||| || |||| |||||||| ||||||||| |||||||||||||||||||||    
T  27890740 aaggttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttactcaaggact 27890641  T
Q  213 tttgtagaattgatatag 230  Q
    |||||||||| |||||||    
T  27890640 tttgtagaatcgatatag 27890623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 31108504 - 31108404
Alignment:
Q  119 tgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgt 217  Q
    |||||||||| ||| ||||||| ||| ||||||||||||||||||||| || || ||||| ||||||||||||| || ||||||||| ||||||||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatcaaaagattttactaaaggacttttgt 31108405  T
Q  218 a 218  Q
    |    
T  31108404 a 31108404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 22498882 - 22499005
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaatt-cgaa 330  Q
    |||| ||||||| ||||| |||||||||| ||||||  ||||||  |||| |||||||||||| |||| || |||||||||||||||||||||||  | |    
T  22498882 aaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgagtcgttcaaggtgaagaaagtcgcaaaattgtgga 22498981  T
Q  331 ttttaggatttaagttgggatttt 354  Q
     |||||||||| ||||||||||||    
T  22498982 atttaggattttagttgggatttt 22499005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 2912096 - 2912181
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    |||||||  |||| |||| ||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  2912096 taaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaatcaaaatcga 2912181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 4841665 - 4841757
Alignment:
Q  174 aaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| ||||||||||| |||||||||||||||  ||||||||||||| |  |||  |||| |||||||||||||||||||||||| |||||    
T  4841665 aaaatcacaatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtatttt 4841757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 21354872 - 21354749
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcgaat 331  Q
    |||| ||||||||||||| |||| ||||| ||||||  |||||| ||||| ||| ||||||||||||| |||||||| ||||||||| ||      | ||    
T  21354872 aaatcgtaaaatcgcaataaaaaacgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaagaaagtc-ca------ggat 21354780  T
Q  332 tttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||||||||||| |||||||    
T  21354779 tttaggatttaagttgggattttgacaacaa 21354749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 30912181 - 30912334
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||| ||||  ||| |||  ||||| ||||||||||||||  | || ||||||| ||| |||||| ||||||||||| ||||  |||    
T  30912181 aaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaactact 30912280  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| ||| ||||||  ||||  || ||||||||||| |||||||| |||||    
T  30912281 tttgtaaaatcgatataagaaatcatagaatcgcaatcataatcgatggatttt 30912334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 21355029 - 21354942
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattt 200  Q
    |||||||||||||| ||||||| |||| | |  |||||||||||| |||||| |||||| ||||||||||||||||||||| ||||||    
T  21355029 aaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcgcaatcaaaatcgatggattt 21354942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 8275366 - 8275410
Alignment:
Q  174 aaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 218  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  8275366 aaaatcgcaattaaaatcgaaggattttactcaaggacttttgta 8275410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 33583444 - 33583557
Alignment:
Q  117 gttgtcaaaatcgggattt-actttaggacgaaagggaatagcaa-aatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    ||||||||||||||||||| ||||  || ||||||||  |||||| |||||  | || |||||||  |||||||||||||| |||||||| |||||||||    
T  33583444 gttgtcaaaatcgggattttacttccggtcgaaaggggttagcaataatcgtaaatcgtaaaatcaaaatcaaaatcgaag-attttacttaaggacttt 33583542  T
Q  215 tgtagaattgatata 229  Q
    |||||||| ||||||    
T  33583543 tgtagaatcgatata 33583557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 17103327 - 17103203
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||||| |||||||||||||| ||||||  |||||| ||||| ||||||| |||| |||| ||||| ||       |||||||||| | |||    
T  17103327 aaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctgaa 17103235  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||| ||||||||| |||||||| |||||||    
T  17103234 ttttaagatttaagtcgggattttgacaacaa 17103203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 10508889 - 10508945
Alignment:
Q  210 acttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||| |||| |||||    
T  10508889 acttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggatttt 10508945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 18491074 - 18491157
Alignment:
Q  272 ttttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggatttt 354  Q
    |||| ||||| | |||||||||| |||| ||||||||||| ||||  ||||||||| | |||||||||||||||| ||||||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggatttt 18491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 20432406 - 20432485
Alignment:
Q  151 ggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    |||||||||||||||  | || |||||||||||||||||| |||| |||||||| ||  | ||||||||||| |||||||    
T  20432406 ggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatatag 20432485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 1179122 - 1179069
Alignment:
Q  170 tcctaaaatcgcaatcaaaatc-gaaggattttactcaaggacttttgtagaat 222  Q
    ||||||| |||||||||||||| ||||||||||||||||  |||||||||||||    
T  1179122 tcctaaagtcgcaatcaaaatctgaaggattttactcaactacttttgtagaat 1179069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 4596688 - 4596745
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    |||||| ||||||||||| |||||||| |||||||  |||||| ||||||||||||||    
T  4596688 taaaattgcaatcaaaattgaaggattctactcaattacttttctagaattgatatag 4596745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 4841946 - 4842026
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcgaattttaggatttaa 343  Q
    ||||||| |||| | ||||| | ||| |||||| |||| ||||||||||| |||||||||||| || |||||||||||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaa-tccaattttaggatttaa 4842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 18490998 - 18491051
Alignment:
Q  272 ttttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||| |||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaat 18491051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 33592958 - 33593042
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    |||||||||||| |||||| |  | || |||||| |||||| |||||||| ||||| ||||||  |||||||||||||||||||||    
T  33592958 cgaaagggaataacaaaattgaaaatcgtaaaattgcaatcgaaatcgaatgattt-actcaactacttttgtagaattgatatag 33593042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 3573984 - 3574052
Alignment:
Q  287 atggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggatttt 354  Q
    |||||||| |||| |||||||||||||||||||| |||||| | ||||||| |||||||| || |||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaatttt 3574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 362
Target Start/End: Original strand, 5422792 - 5422876
Alignment:
Q  279 attttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttaggatttaagttgggattttaacaacaa 362  Q
    ||||| |||| ||||| |||| ||||||||||| ||||| |||||||   ||||||||| |||||||| |||||||| |||||||    
T  5422792 attttgctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaa 5422876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 23506193 - 23506102
Alignment:
Q  117 gttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaa 207  Q
    |||||| |||| ||||||| |||||| | |||||| ||||||||||||||  | |  ||||||| |||| ||||||||||||||||| ||||    
T  23506193 gttgtcgaaatggggattttactttaagtcgaaagagaatagcaaaatcgaaaattgtaaaatcacaattaaaatcgaaggattttagtcaa 23506102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 27890621 - 27890582
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27890621 atagcaaaatcaggactcgtaaaatcgcaatcaaaatcga 27890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 17372581 - 17372533
Alignment:
Q  123 aaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactc 171  Q
    ||||||| ||||||||||||| | |||||||| ||||||||| ||||||    
T  17372581 aaaatcgagatttactttaggtcaaaagggaacagcaaaatccggactc 17372533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 115 - 266
Target Start/End: Original strand, 21846050 - 21846202
Alignment:
Q  115 aggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactt 213  Q
    |||||||||||||| ||| ||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggactt 21846149  T
Q  214 ttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||| ||||||  |||||||||||||||||||||||| ||||||||||    
T  21846150 ttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatagatgaatttt 21846202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 114 - 362
Target Start/End: Original strand, 14074258 - 14074498
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||| ||| ||||||| ||| ||||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggact 14074357  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaag 312  Q
    |||||||||| ||||||| |||||||||||||||||||          ||||||   ||||||| |||| |||| ||||||| |||| |||||  |||||    
T  14074358 tttgtagaatcgatataggaaattgtaaaatcgcaatc----------aattttagctattttaagattctactctggatttgagtcgttgaacatgaag 14074447  T
Q  313 aaagtcgcaaaattcga-attttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||| | | |||||||||||||||  |||||||| |||||||    
T  14074448 aaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaa 14074498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 114 - 362
Target Start/End: Original strand, 41032548 - 41032798
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| ||||||| |||| |||  ||||| ||| |||||||| |  | || |||||||||||  |||||||||| |||||||||||  | |    
T  41032548 aaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaactagt 41032647  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaag 312  Q
    |||||||||| ||||||  |||||||||||||||||| |||||||||| ||||||| |||||||| ||| |||||||||||| |||| ||||||||||||    
T  41032648 tttgtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaag 41032747  T
Q  313 aaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    ||| ||||||||| | ||||| || ||||||||| | |||||| |||||||    
T  41032748 aaaatcgcaaaatcctgaattctacgatttaagtcgagattttgacaacaa 41032798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 9351838 - 9351991
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||  || ||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||||    
T  9351838 aaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggact 9351937  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||  |||||| ||||||||||||| |||||||||||||||||||||    
T  9351938 tttgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaatttt 9351991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 116 - 260
Target Start/End: Original strand, 16125232 - 16125377
Alignment:
Q  116 ggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    |||||| |||||||| | ||||||| ||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatt 16125331  T
Q  215 tgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||    
T  16125332 tgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatg 16125377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 19009943 - 19010073
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| | |||    
T  19009943 aaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaa 19010042  T
Q  331 ttttaggatttaagttgggattttaacaaca 361  Q
    |||||||||||||||  ||||||| ||||||    
T  19010043 ttttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 25146543 - 25146697
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||| ||| ||||||| |||  ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||| ||    
T  25146543 aaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 25146642  T
Q  213 tttgtagaattgatatagaaaattgt-aaaatcgcaatcaaaatcgatgaatttt 266  Q
    || ||||||| ||||||||||||| | |||||||||||||||||||||| |||||    
T  25146643 ttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggatttt 25146697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 13100544 - 13100391
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| | | ||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||||||||||||||     
T  13100544 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggaca 13100445  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||  ||||  ||||||||||||||||||||||| |||||    
T  13100444 tttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 23529010 - 23528857
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||| | |||| || |||   ||| |||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23529010 aaggttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 23528911  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  23528910 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 23528857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 19009755 - 19009866
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||| |||||||||||||    
T  19009755 cgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatataggaaattgtaaaatc 19009854  T
Q  245 gcaatcaaaatc 256  Q
    ||||||||||||    
T  19009855 gcaatcaaaatc 19009866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 9954828 - 9954961
Alignment:
Q  133 tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaa 232  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||  |||||  |||||| |    
T  9954828 tttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaagaatccatatagga 9954927  T
Q  233 aattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||||||||| ||||||| |||||    
T  9954928 aattgtaaaatcgcaatcaagatcgatggatttt 9954961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 118 - 266
Target Start/End: Original strand, 17869529 - 17869678
Alignment:
Q  118 ttgtcaaaatcgggatt-tactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    ||||||||||||||| | || || ||| | |||||||| |||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||     
T  17869529 ttgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggactttta 17869628  T
Q  217 tagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||  || || ||||||||||||||||||||||||||||||||||||    
T  17869629 tagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcgatgaatttt 17869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 9128647 - 9128766
Alignment:
Q  147 aaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgc 246  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||    
T  9128647 aaagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggatttttgtaggatcgatatagaaaattgtaaaatcgc 9128746  T
Q  247 aatcaaaatcgatgaatttt 266  Q
    |||||||||  |||||||||    
T  9128747 aatcaaaatttatgaatttt 9128766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 9955032 - 9955163
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||  |||||||||||| ||||||||||||||||||||||||| |  ||    
T  9955032 aaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaa 9955131  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||||||||||| |||||||    
T  9955132 ttttaggatttaagttgggattttgacaacaa 9955163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 18304593 - 18304739
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| || |||| ||| ||||||| || ||||||||||       |||||||||| ||||||||||||||||||||| |||||||    
T  18304593 aaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatcg-------taaaatcgcattcaaaatcgaaggattttactaaaggact 18304685  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  18304686 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 18304739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 17055695 - 17055847
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||  ||||||| ||| |||||||| || | ||||||||||||| |||||||||||||||||||||||||||||||||||  |||    
T  17055695 aaggttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 17055793  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| |||| |  |||||||||||| ||||||||||| |||| |||||    
T  17055794 tttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggatttt 17055847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 23528788 - 23528657
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||||||| |||||||||||  ||||||| |||||||||||| |||||||||||| |||| |||||| |||||||||||||||||| | |||    
T  23528788 aaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaa 23528689  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||| |||||||||||||||||| |||||||    
T  23528688 ttttaagatttaagttgggattttgacaacaa 23528657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 12513413 - 12513283
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| |||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||| |||||| |||||||||||||||||| | | |    
T  12513413 aaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctaga 12513314  T
Q  331 ttttaggatttaagttgggattttaacaaca 361  Q
    || |||||||||||| |||||||| ||||||    
T  12513313 ttgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 13276263 - 13276394
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| |||||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||| ||| |||||| |||||||||||||||||| | | |    
T  13276263 aaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctaga 13276362  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||| | |||||||| |||||||    
T  13276363 ttttaggatttaaatcgggattttgacaacaa 13276394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 359
Target Start/End: Complemental strand, 13100323 - 13100195
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat--tcga 329  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||| |||| ||||| ||||||||||||| |||||  |||     
T  13100323 aaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcg- 13100225  T
Q  330 attttaggatttaagttgggattttaacaa 359  Q
    ||||||| ||||||||||||||||| ||||    
T  13100224 attttagaatttaagttgggattttgacaa 13100195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 9327212 - 9327343
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| ||||||  |||||| |||||||||||| ||||| |||| ||||||||| ||||||||||||||  |  ||    
T  9327212 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaa 9327311  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||  |||||||||||||||    
T  9327312 ttttaggatttaagtcaggattttaacaacaa 9327343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 30619294 - 30619156
Alignment:
Q  114 aaggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactt 213  Q
    |||||||||||||||||||||| ||| ||| |||||| ||| ||||||||||  | || |||| ||||||  ||||||||||||||||||||||  ||||    
T  30619294 aaggttgtcaaaatcgggattttcttcaggtcgaaagagaagagcaaaatcgacaatcgtaaa-tcgcaacaaaaatcgaaggattttactcaactactt 30619196  T
Q  214 ttgtagaattgatatagaaaattgtaaaatcgcaatcaaa 253  Q
    ||||||||| |||||  |||||||||||||||||||||||    
T  30619195 ttgtagaatcgatatgaaaaattgtaaaatcgcaatcaaa 30619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 16125446 - 16125578
Alignment:
Q  226 tatagaaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtg---aagaaagtcgcaa 322  Q
    |||| ||||| |||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||||||| ||| |||||||||   |||||||||||||    
T  16125446 tataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaa 16125545  T
Q  323 aattc-gaattttaggatttaagttgggatttt 354  Q
    ||| | ||||||||||||||||||  |||||||    
T  16125546 aatcctgaattttaggatttaagtcaggatttt 16125578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 47786209 - 47786059
Alignment:
Q  116 ggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactttt 215  Q
    |||||||||||||||||||| |||||||  ||||| ||| ||||||||||  | || ||||||| ||| |||||||||||||||||||||||  ||||||    
T  47786209 ggttgtcaaaatcgggattttctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttactcaactactttt 47786110  T
Q  216 gtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||||  ||||   ||||||| ||| |||||||||| |||||    
T  47786109 gtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggatttt 47786059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 17197306 - 17197413
Alignment:
Q  116 ggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    |||| |||||||||||| ||||||| | | ||||||||| |||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||||    
T  17197306 ggttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttt 17197405  T
Q  215 tgtagaat 222  Q
    ||||||||    
T  17197406 tgtagaat 17197413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 365
Target Start/End: Original strand, 42180062 - 42180196
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||| |||| ||||||||||||||| ||||||| ||||||   ||| |||||||||||| | || ||||||| ||||||||||||||||| | |||    
T  42180062 aaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaa 42180161  T
Q  331 ttttaggatttaagttgggattttaacaacaaact 365  Q
    |||||| ||||||||||||||||| ||||||||||    
T  42180162 ttttagaatttaagttgggattttgacaacaaact 42180196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 25146773 - 25146896
Alignment:
Q  240 aaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttagga 338  Q
    |||||||||| ||||| |||| | ||||  |||||| ||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  25146773 aaatcgcaattaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttagga 25146872  T
Q  339 tttaagttgggattttaacaacaa 362  Q
    |||||||  ||||||| |||||||    
T  25146873 tttaagtcaggattttgacaacaa 25146896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 12002638 - 12002753
Alignment:
Q  116 ggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    ||||||||||||||||| |||| |||| | ||||||||| ||||||||| |||||||  |||||| |||| |||||||||||||||||||||  ||||||    
T  12002638 ggttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttactcatagacttt 12002735  T
Q  215 tgtagaattgatatagaa 232  Q
    |||||||| |||||||||    
T  12002736 tgtagaatcgatatagaa 12002753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 17869747 - 17869840
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||||| |||||||||||||| ||||||||| |||||||||||| |||| |||||||| ||| | |||||||||||||||||||||||    
T  17869747 aaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaat 17869840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 238 - 362
Target Start/End: Original strand, 21846271 - 21846396
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    ||||||||||||||||||||||| |||||   ||||||  |||| |||||||||||| |||| ||||||||||| ||||||||||||| | | |||||||    
T  21846271 taaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttag 21846370  T
Q  337 gatttaagttgggattttaacaacaa 362  Q
    ||||||| | |||||||| |||||||    
T  21846371 gatttaactcgggattttgacaacaa 21846396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 16434859 - 16434718
Alignment:
Q  118 ttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    ||||||||||| ||||||  || |||| | |||||||||||||||||||  | || |||||| |||||||||||||||||||||||||| |  |||||||    
T  16434859 ttgtcaaaatcaggatttttctctaggtcaaaagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttg 16434760  T
Q  217 tagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    ||||||||||||  || ||   ||||||||||||||||||||||    
T  16434759 tagaattgatat--aagataacaaaatcgcaatcaaaatcgatg 16434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 18304815 - 18304939
Alignment:
Q  240 aaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcatt-gaaggtgaagaaagtcgcaaaattc-gaattttagg 337  Q
    |||||||||||||||| |||| ||||||  ||||||  |||| ||||||| |||| |||| || ||||||||||||||||||||||| | | ||||||||    
T  18304815 aaatcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttagg 18304914  T
Q  338 atttaagttgggattttaacaacaa 362  Q
    ||||||||||||||||| |||||||    
T  18304915 atttaagttgggattttgacaacaa 18304939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 9128845 - 9128968
Alignment:
Q  240 aaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcgaa-ttttagga 338  Q
    ||||||||||||||||||||||||||||  ||||||| |||| ||||||  |||| |||| || || |||||||||||||||| || | || ||||||||    
T  9128845 aaatcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttagga 9128944  T
Q  339 tttaagttgggattttaacaacaa 362  Q
    ||||||| | ||||||||||||||    
T  9128945 tttaagtcgtgattttaacaacaa 9128968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 238 - 362
Target Start/End: Original strand, 9352066 - 9352191
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    ||||||||||||||||||||| | ||||||  |||||| ||| | | |||| ||||| |||| ||||||||||||||||||||||||  | | |||||||    
T  9352066 taaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttag 9352165  T
Q  337 gatttaagttgggattttaacaacaa 362  Q
    ||||||||| |||||||| |||||||    
T  9352166 gatttaagtcgggattttgacaacaa 9352191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 42179880 - 42179992
Alignment:
Q  147 aaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgc 246  Q
    ||||||||||||| |||||  |||| |||||||||||||||||||||||||||||| || |||||||||||||       |||| ||||||||||| | |    
T  42179880 aaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgaggacttttgtag-------ataggaaattgtaaaaccac 42179972  T
Q  247 aatcaaaatcgatgaatttt 266  Q
    |||||||||||||| |||||    
T  42179973 aatcaaaatcgatggatttt 42179992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 8773613 - 8773503
Alignment:
Q  120 gtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 218  Q
    |||||||||| || ||||||| | | ||||||||||||||| |||   ||||| |||||||||||| ||||| ||||||||||||| ||||| |||||||    
T  8773613 gtcaaaatcgagactttacttaaagtcgaaagggaatagcagaat---gactcgtaaaatcgcaattaaaattgaaggattttacttaaggatttttgta 8773517  T
Q  219 gaattgatatagaa 232  Q
    ||||||||||||||    
T  8773516 gaattgatatagaa 8773503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 32881641 - 32881531
Alignment:
Q  146 gaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcg 245  Q
    ||||| ||| ||||||||||  | || |||||||||||   |||||||||||||||||||||  || |||||||||| ||||||  ||||||||||||||    
T  32881641 gaaagagaaaagcaaaatcgacaatcgtaaaatcgcaactgaaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcg 32881542  T
Q  246 caatcaaaatc 256  Q
    |||||||||||    
T  32881541 caatcaaaatc 32881531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 343
Target Start/End: Original strand, 17055996 - 17056108
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||  ||| |||||||||| | |||| ||||||||| ||||| | ||||||| | | |    
T  17055996 aaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgga 17056095  T
Q  331 ttttaggatttaa 343  Q
    |||||||||||||    
T  17056096 ttttaggatttaa 17056108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 362
Target Start/End: Original strand, 12800622 - 12800709
Alignment:
Q  276 aggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||| ||||| |||| ||||| ||||||||||||| ||||| |  |||||||||||||||||||||||||| |||||||    
T  12800622 aggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaa 12800709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 27502130 - 27502230
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| | | | | |  ||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||| |||    
T  27502130 aaggttgtcaaaatcgggaatttacttcaagtcaacatagaatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttactcaagaact 27502229  T
Q  213 t 213  Q
    |    
T  27502230 t 27502230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 13276112 - 13276188
Alignment:
Q  182 aatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    ||||||||||||||||||  ||| ||||| ||||||||||| ||||||  |||||||||||| ||||||||||||||||    
T  13276112 aatcaaaatcgaaggatt--acttaaggaattttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatg 13276188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 9321550 - 9321608
Alignment:
Q  153 aatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||  |||||||    
T  9321550 aatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttatccaaggac 9321608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 27917232 - 27917300
Alignment:
Q  198 ttttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||  ||||||||| ||||||||||  ||||||||  |||||||||||||||||||||||||    
T  27917232 ttttactcaactacttttgtataattgatataagaaattgtattatcgcaatcaaaatcgatgaatttt 27917300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 30619150 - 30619076
Alignment:
Q  289 ggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||| ||||||||||||||| ||||||||| | | |||||||||||||||| |||||||| |||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaa 30619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 9954771 - 9954824
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgg 166  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  9954771 aaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatcgg 9954824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 12513625 - 12513486
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||||||  ||| ||| | |||| ||| ||||||||||  | |  ||||||||||| ||||||| |||||||||||||||  |||    
T  12513625 aaggttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttactcaactact 12513526  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    | |||||       |||  ||||||||||||||||||||||||||||    
T  12513525 tctgtag-------ataagaaattgtaaaatcgcaatcaaaatcgat 12513486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 32881459 - 32881415
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttatttta 276  Q
    |||| |||||||||||||||||||||||||||||||| |||||||    
T  32881459 aaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttta 32881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 12002751 - 12002790
Alignment:
Q  152 gaatagcaaaatcgggactcctaaaatcgcaatcaaaatc 191  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  12002751 gaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 12002790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 22789503 - 22789421
Alignment:
Q  147 aaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatata 229  Q
    ||||||| ||| |||||||  | || ||||||| ||||||||||| |||||||||||| | ||||||||||||| | ||||||    
T  22789503 aaagggattagaaaaatcgcaaatcgtaaaatcacaatcaaaatcaaaggattttactaatggacttttgtagactcgatata 22789421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 34478836 - 34478898
Alignment:
Q  301 ttgaaggtgaagaaagtcgcaaaattcgaa-ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||||| |||||| | || ||||| ||||||||| ||||||||||||||||    
T  34478836 ttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaa 34478898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 9327109 - 9327142
Alignment:
Q  233 aattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||||||||||||||||||||||||    
T  9327109 aattgtaaaatcgcaatcaaaatcgatgaatttt 9327142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 18228533 - 18228468
Alignment:
Q  198 ttttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaat 263  Q
    ||||||||||   |||||||||||| ||||||  |||| |||||||||||||||| ||||||||||    
T  18228533 ttttactcaacttcttttgtagaatcgatataagaaatcgtaaaatcgcaatcaacatcgatgaat 18228468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 8773505 - 8773464
Alignment:
Q  152 gaatagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||| ||||||||||||| |||||||||||| ||||||||    
T  8773505 gaatagtaaaatcgggactcataaaatcgcaataaaaatcga 8773464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 18337549 - 18337649
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaac 360  Q
    ||||||| |||||| || || | |||||||||| |||| ||||||||||| ||||| ||||||| | | |||||||| | ||||| |||||||| |||||    
T  18337549 attttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttagg-tataagtcgggattttgacaac 18337647  T
Q  361 aa 362  Q
    ||    
T  18337648 aa 18337649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 8e-53; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 7489058 - 7489211
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||| ||| ||||||| | | ||||||| |||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||    
T  7489058 aaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggact 7489157  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7489158 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 7489211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 11879954 - 11879801
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||||||||| |||| ||| | ||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||  ||| |||    
T  11879954 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11879855  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||| |||||| |||||||||||||||||||||||| |||||||||||| |||||    
T  11879854 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggatttt 11879801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 11897370 - 11897217
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||||||||| |||| ||| | ||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||  ||| |||    
T  11897370 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11897271  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||| |||||| |||||||||||||||||||||||| |||||||||||| |||||    
T  11897270 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggatttt 11897217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 45403379 - 45403238
Alignment:
Q  118 ttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    ||||||||||||||| |||| || | | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttg 45403280  T
Q  217 tagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  45403279 tagaatcgatataggaaattgtaaaa-cgcaatcaaaatcgat 45403238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 5922400 - 5922265
Alignment:
Q  116 ggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttt 214  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||   || ||||||||||||||||||||||||||||||||| |||||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 5922301  T
Q  215 tgtagaattgatatagaaaattgtaaaatcgcaatc 250  Q
    |||||||| ||||||| |||||||||||||||||||    
T  5922300 tgtagaatcgatataggaaattgtaaaatcgcaatc 5922265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 24414062 - 24414215
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| || | ||||||| | | |||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||| | |    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatt 24414161  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| |||||||||||||  ||||||| || |||||||||    
T  24414162 tttgtagaatcgatataggaaattgtaaaatcctaatcaaattcaatgaatttt 24414215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 15294802 - 15294672
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| | ||| |||||| ||||| |||| ||||||||||| ||||||||||||| | |||    
T  15294802 aaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaa 15294703  T
Q  331 ttttaggatttaagttgggattttaacaaca 361  Q
    ||||||||||||||| |||||||| ||||||    
T  15294702 ttttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 15475171 - 15475041
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| | ||| |||||| ||||| |||| ||||||||||| ||||||||||||| | |||    
T  15475171 aaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaa 15475072  T
Q  331 ttttaggatttaagttgggattttaacaaca 361  Q
    ||||||||||||||| |||||||| ||||||    
T  15475071 ttttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 113 - 266
Target Start/End: Complemental strand, 17647352 - 17647198
Alignment:
Q  113 aaaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    ||||||||| |||||||||||||  ||| ||| |||||| ||  ||||||||||  | || |||||||||||||||||||||||||||||||||||  |     
T  17647352 aaaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttactcaactag 17647253  T
Q  212 ttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||    
T  17647252 ttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggatttt 17647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 145 - 325
Target Start/End: Complemental strand, 15231943 - 15231763
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    |||||| ||| ||||||||||  | || |||||||||||  ||||||| | ||||||||||||  ||||||||||||| |||||| ||||||||||||||    
T  15231943 cgaaagagaagagcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaactacttttgtagaatcgatataaaaaattgtaaaatc 15231844  T
Q  245 gcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||||||||   | || ||||||| ||||||| ||||||| |||| |||| |||| ||||||||||||||  |||||||||    
T  15231843 gcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaat 15231763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 231 - 345
Target Start/End: Original strand, 3094249 - 3094364
Alignment:
Q  231 aaaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-ga 329  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||| | ||    
T  3094249 aaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctga 3094348  T
Q  330 attttaggatttaagt 345  Q
    |||||| |||||||||    
T  3094349 attttaagatttaagt 3094364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 19704266 - 19704385
Alignment:
Q  147 aaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgc 246  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||||   ||||  ||||||| |    
T  19704266 aaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgatatttgaaatcttaaaatcac 19704365  T
Q  247 aatcaaaatcgatgaatttt 266  Q
    |||||||||||||| |||||    
T  19704366 aatcaaaatcgatggatttt 19704385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 32424655 - 32424542
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    |||| |||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||    
T  32424655 cgaaggggaatagcaaa-tcggaactcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaatc 32424557  T
Q  245 gcaatcaaaatcgat 259  Q
    ||||| |||||||||    
T  32424556 gcaataaaaatcgat 32424542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 29384087 - 29384240
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||||||  ||| ||| ||||||  || || |||||||  | || ||||||||||| |||||||||||||||||||||||  |||    
T  29384087 aaggttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactact 29384186  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||| |||||  |||| |||||||||||||||||||||||| |||||    
T  29384187 tttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 239 - 362
Target Start/End: Complemental strand, 5922174 - 5922050
Alignment:
Q  239 aaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttagg 337  Q
    |||||||||||||||||||||| ||||||  |||||| ||||| |||||||||| |||||| |||||||||||||||||| |||||| | | ||||||||    
T  5922174 aaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttagg 5922075  T
Q  338 atttaagttgggattttaacaacaa 362  Q
    |||||||| |||||||| |||||||    
T  5922074 atttaagtcgggattttgacaacaa 5922050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 11879732 - 11879601
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||| |||||| ||||| |||| ||||| ||||||||||| ||||||| | |||    
T  11879732 aaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaa 11879633  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||  | ||||| |||||||    
T  11879632 ttttaggatttaagtcagaattttgacaacaa 11879601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 11897148 - 11897017
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||| |||||| ||||| |||| ||||| ||||||||||| ||||||| | |||    
T  11897148 aaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaa 11897049  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||  | ||||| |||||||    
T  11897048 ttttaggatttaagtcagaattttgacaacaa 11897017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 15294977 - 15294870
Alignment:
Q  159 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||  ||||  ||||||||||| ||||||| |    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15294878  T
Q  259 tgaatttt 266  Q
    || |||||    
T  15294877 tggatttt 15294870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 15475346 - 15475239
Alignment:
Q  159 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||  ||||  ||||||||||| ||||||| |    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15475247  T
Q  259 tgaatttt 266  Q
    || |||||    
T  15475246 tggatttt 15475239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 45403156 - 45403030
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaatttta 335  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| | ||||||||||||||| |||||||| |||||||||||||||| | | ||||||    
T  45403156 gtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggatttta 45403057  T
Q  336 ggatttaagttgggattttaacaacaa 362  Q
    | |||||||| | |||||| |||||||    
T  45403056 gaatttaagtcgcgattttgacaacaa 45403030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 19704452 - 19704583
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaa--ttcga 329  Q
    |||| ||||||| |||||||||||||||| ||||||| |||| | | ||| |||||||||||| |||| ||||||||||||||||||||||||   | ||    
T  19704452 aaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttga 19704551  T
Q  330 attttaggatttaagttgggattttaacaaca 361  Q
    |||||| |||||||||||||||||| ||||||    
T  19704552 attttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 260
Target Start/End: Complemental strand, 23142529 - 23142381
Alignment:
Q  113 aaaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    |||||||||||||||| ||| |||| || |   |||||||||||||||||| ||| | || ||||||||||||  |||||||| ||||||| ||||  ||    
T  23142529 aaaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaac 23142430  T
Q  212 ttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  23142429 ttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatg 23142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 16752345 - 16752264
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgat 226  Q
    ||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  16752345 cgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtagaattgat 16752264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 362
Target Start/End: Complemental strand, 17647111 - 17646994
Alignment:
Q  246 caatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaag 344  Q
    ||||||||||||||||||||| | |||||| ||||| ||||||| |||| |||| ||||||||||||||||||||||||| | |||||||| ||||||||    
T  17647111 caatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaag 17647012  T
Q  345 ttgggattttaacaacaa 362  Q
    | || ||||| |||||||    
T  17647011 tcggaattttgacaacaa 17646994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 29384314 - 29384406
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||||||||||||||| |||||||||||||| |||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  29384314 aaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 29384406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 2040464 - 2040364
Alignment:
Q  123 aaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaa 221  Q
    |||||||||| ||||||| | | |||||| || |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaa 2040365  T
Q  222 t 222  Q
    |    
T  2040364 t 2040364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 40541595 - 40541711
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||| | | ||||||| | ||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||    
T  40541595 aaggttatcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttattcaaggact 40541694  T
Q  213 tttgtagaattgatata 229  Q
    | |||||||| ||||||    
T  40541695 tctgtagaatcgatata 40541711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 23142307 - 23142224
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaa 315  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| |||||| ||||||||    
T  23142307 aaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 27836461 - 27836592
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||| ||| |||||||||||| |||  ||||||||||| |||  |||||||| | |||    
T  27836461 aaattgtaaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaa 27836560  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||| |||||| | ||||| |||||||    
T  27836561 ttttaggatctaagtttgaattttgacaacaa 27836592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 7262084 - 7262007
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  7262084 cgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaat 7262007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 22910205 - 22910319
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||| |||||| ||||| |||| ||||| ||||||||||||| ||||| |  ||||||||    
T  22910205 taaaatcgcaatcaaaatcaatggattttgcctattttaagattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttag 22910304  T
Q  337 gatttaagttgggat 351  Q
    ||||||||| |||||    
T  22910305 gatttaagtcgggat 22910319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 6810953 - 6810861
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| ||||||||| ||||||||||||||| |||||| |||||||  ||| |||||||||||| |||| |||||||||||||||||||||||||    
T  6810953 aaatcgtaaaatcgtaatcaaaatcgatga-ttttgcctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 6811141 - 6811021
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    |||||| ||| ||||||||||  | || ||||||||||| ||||||||||| |||||| ||||  ||||||||||||| ||||||  |||||| ||||||    
T  6811141 cgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaattttaatcaactacttttgtagaatagatataagaaattg-aaaatc 6811043  T
Q  245 gcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||||| |||||    
T  6811042 gcaatcaaaatcgatggatttt 6811021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 15761193 - 15761286
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||  |||||||||||||||||||||  ||||||||||||| ||||||  || | |||||||||||||||||||||||| |||||    
T  15761193 taaaatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggatttt 15761286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 359
Target Start/End: Complemental strand, 31424295 - 31424167
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||| ||| ||||||| |||||| ||||| | |||||||||| |||| ||||| | ||||||||||| ||||| | |||    
T  31424295 aaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaa 31424196  T
Q  331 ttttaggatttaagttgggattttaacaa 359  Q
    |||||| ||||||||  ||||||| ||||    
T  31424195 ttttagaatttaagtcaggattttgacaa 31424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 27836114 - 27836181
Alignment:
Q  153 aatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 220  Q
    |||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27836114 aatagcaaaattaggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 17566418 - 17566313
Alignment:
Q  147 aaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgc 246  Q
    |||||||| |||||||| |  | || |||||| |||||||||||||||| |||||||||||  ||||||||||||  ||||||  |||||||||||||||    
T  17566418 aaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgc 17566319  T
Q  247 aatcaa 252  Q
    ||||||    
T  17566318 aatcaa 17566313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 359
Target Start/End: Original strand, 6292339 - 6292467
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaa 330  Q
    ||||||||| | |||||||||||||| |||||||| |||||||||| ||| |||||||| ||| |||| || ||| |||| |||||| |||||| |  ||    
T  6292339 aaattgtaagaccgcaatcaaaatcgttgaatttttcttattttagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaa 6292438  T
Q  331 ttttaggatttaagttgggattttaacaa 359  Q
    ||||| ||||||||| || ||||||||||    
T  6292439 ttttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 22909979 - 22910126
Alignment:
Q  114 aaggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactt 213  Q
    |||||||||||||||||  ||||| | | | |||||| ||| || |||||||  | || ||||||||||| | |||| ||||||||||| ||||  | ||    
T  22909979 aaggttgtcaaaatcggattttacatcatgtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccgaaattgaaggattttattcaactattt 22910078  T
Q  214 ttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatga 261  Q
    ||||||||| ||||||  |||| ||||||||||||||||| |||||||    
T  22910079 ttgtagaatcgatataagaaatcgtaaaatcgcaatcaaagtcgatga 22910126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 31424518 - 31424375
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||| ||||| |||| ||| |||||| ||  ||||||||||  | || |||||||||||||||||    ||||||||||||||  |||    
T  31424518 aaggttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcgcaatcaaaac---aggattttactcaactact 31424422  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
     |||| |||||||||||  |||| ||||||| |||||| ||||||||    
T  31424421 cttgtggaattgatataagaaatagtaaaattgcaatccaaatcgat 31424375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 477101 - 477175
Alignment:
Q  289 ggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    |||||||||||||||||||||||||||||| |||||| | | ||||||||||||||||  ||||||| |||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaa 477175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 8582314 - 8582244
Alignment:
Q  196 gattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||  ||||||||||||||||||||  |||| |||||||  |||||||||||||||||||||    
T  8582314 gattttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaatttt 8582244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 259
Target Start/End: Original strand, 24056348 - 24056491
Alignment:
Q  117 gttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactttt 215  Q
    |||||||||| || |||||  ||| ||| |||||||||| |||||||| |    || |||||| | ||||||||||||||||||||||||||  | ||||    
T  24056348 gttgtcaaaaccgagattttgcttcaggtcgaaagggaagagcaaaattgaatatcataaaatggtaatcaaaatcgaaggattttactcaactagtttt 24056447  T
Q  216 gtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    |||||||  |||||  ||||  |||||||||||||| |||||||    
T  24056448 gtagaatcaatataacaaatgttaaaatcgcaatcataatcgat 24056491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 32424464 - 32424402
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggattt 294  Q
    |||| |||||||||||||||||||| || |||||||  |||||||||||| ||||||| ||||    
T  32424464 aaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattctactatgaattt 32424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 19335329 - 19335241
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggatttta 202  Q
    ||||||||||||||||||| ||||||||||| | ||| | ||||| ||||| || |||| || |||| ||||||||||||| ||||||||    
T  19335329 aaggttgtcaaaatcgggactttactttaggtcaaaaagaaatagtaaaattggaactc-tacaatcacaatcaaaatcgatggatttta 19335241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 2040354 - 2040315
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  2040354 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 2040315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 359
Target Start/End: Original strand, 7489286 - 7489409
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttat----tttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaatt 332  Q
    |||||| ||||||||||||||| |||||||  |||    ||||| ||| ||||| |||||| |||| |||||||||||||||   ||||||||| | |||    
T  7489286 taaaattgcaatcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtatt 7489382  T
Q  333 ttaggatttaagttgggattttaacaa 359  Q
    ||| ||||||| | |||||||| ||||    
T  7489383 ttacgatttaattggggattttgacaa 7489409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 15761464 - 15761567
Alignment:
Q  260 gaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaaca 358  Q
    ||||||||| |||||| ||||||| ||||| |||| |||| |||||||| || ||| || |||||| | | | |||||||||||||| | |||||| |||    
T  15761464 gaattttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgaca 15761563  T
Q  359 acaa 362  Q
    ||||    
T  15761564 acaa 15761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 27836351 - 27836392
Alignment:
Q  225 atatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| ||||||||||||| ||||||||||||||| |||||    
T  27836351 atataggaaattgtaaaatcacaatcaaaatcgatggatttt 27836392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 40541714 - 40541751
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatc 191  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  40541714 atagcaaagtcgggactcgtaaaatcgcaatcaaaatc 40541751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 24056603 - 24056679
Alignment:
Q  270 tattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagt 345  Q
    |||||| ||||||  |||||||||| |||| || || ||||| ||||||||||||| | | ||||||||||||||||    
T  24056603 tattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagt 24056679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 28746130 - 28745977
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||| ||||||| ||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  28746130 aaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaact 28746031  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  28746030 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 28745977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 24619972 - 24620114
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||| | ||||||| | | | ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagact 24620071  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaat 255  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  24620072 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaat 24620114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 29067630 - 29067478
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||| | ||||||| ||| |||| ||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||| |    
T  29067630 aaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaaggatt 29067532  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||||||| | || |||||||||||||||||||||||||| |||||    
T  29067531 tttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggatttt 29067478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 39428258 - 39428104
Alignment:
Q  117 gttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaat----cgaaggattttactcaaggac 211  Q
    |||||||||||||||| |||||||  ||  |||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||| ||     
T  39428258 gttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagat 39428159  T
Q  212 ttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  39428158 ttttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 39428104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 20756331 - 20756223
Alignment:
Q  158 caaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcg 257  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  20756331 caaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 20756232  T
Q  258 atgaatttt 266  Q
    ||| |||||    
T  20756231 atggatttt 20756223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 8592174 - 8592291
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||| ||||||||| ||||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8592174 aaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 8592273  T
Q  213 tttgtagaattgatatag 230  Q
    |||||||||| |||||||    
T  8592274 tttgtagaatcgatatag 8592291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 239 - 356
Target Start/End: Complemental strand, 21963554 - 21963436
Alignment:
Q  239 aaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttagg 337  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |||| || |||||||||||||||| ||||| | ||||||||||    
T  21963554 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21963455  T
Q  338 atttaagttgggattttaa 356  Q
    |||||||| ||||||||||    
T  21963454 atttaagtcgggattttaa 21963436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 239 - 356
Target Start/End: Complemental strand, 21985990 - 21985872
Alignment:
Q  239 aaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttagg 337  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |||| || |||||||||||||||| ||||| | ||||||||||    
T  21985990 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21985891  T
Q  338 atttaagttgggattttaa 356  Q
    |||||||| ||||||||||    
T  21985890 atttaagtcgggattttaa 21985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 8156127 - 8156259
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttg-cttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-ga 329  Q
    |||| |||||||||||||||||||||||| |||||| || ||||| ||||| |||||||||||| |||||||||||||||| ||| ||| ||||||| ||    
T  8156127 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctga 8156226  T
Q  330 attttaggatttaagttgggattttaacaacaa 362  Q
    ||||||| ||||||||||||||||| |||||||    
T  8156227 attttagaatttaagttgggattttgacaacaa 8156259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 22494783 - 22494895
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaatttta 335  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||| ||||||||||| ||||||||||||| ||  ||||||    
T  22494783 gtaaaatcgcaatcaaaatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagatttta 22494882  T
Q  336 ggatttaagttgg 348  Q
    |||||||||||||    
T  22494883 ggatttaagttgg 22494895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 29067416 - 29067285
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||| ||||||||||||||| ||||||  |||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||| | |||    
T  29067416 aaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaa 29067317  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||||| |||||||| |||||||    
T  29067316 ttttagaatttaagtcgggattttgacaacaa 29067285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 3041570 - 3041469
Alignment:
Q  121 tcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 219  Q
    ||||||||||||||| |||| | | ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 3041471  T
Q  220 aa 221  Q
    ||    
T  3041470 aa 3041469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 22355841 - 22355990
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||| | ||||| | ||| ||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||||||    
T  22355841 aaggttctcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggact 22355940  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||| ||| |||    |||||||||||| ||||| ||||||||||| |||||    
T  22355941 tttgtaaaatcgat----aaaattgtaaaaccgcaaacaaaatcgatggatttt 22355990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 20756171 - 20756040
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||| |||||||||||||||  ||||||| ||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||| | |||    
T  20756171 aaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctgaa 20756072  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||  |||||||| |||||||| |||||||    
T  20756071 ttttataatttaagtcgggattttgacaacaa 20756040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 22971121 - 22971050
Alignment:
Q  155 tagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgat 226  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22971121 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgat 22971050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 28745902 - 28745771
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||||||||||  ||||||  |||| ||||||| |||| |||| ||||||||||||||||||||||||| |  ||    
T  28745902 aaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaa 28745803  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||| | |||||||| |||||||    
T  28745802 ttttaggatttaaatcgggattttgacaacaa 28745771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 17064661 - 17064508
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||||||  ||| ||| ||||||  || | ||||||||  | || |||||||||||||||||||||||||||||||||||  |||    
T  17064661 aaggttgtcaaaattgggattttgcttcaggtcgaaagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 17064562  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||  |||||  |||||||||||| |||||||||||||||| |||||    
T  17064561 tttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggatttt 17064508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 25870097 - 25870250
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||| |||||  ||||||| |||||| ||| || |||||||  | || ||||||||||| ||||||| |||||||||||||||  |      
T  25870097 aaggttgtcaaaatcgagattttgctttaggtcgaaagagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatcaaaggattttactcaactaag 25870196  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||| |||||    
T  25870197 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 3449289 - 3449420
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||||||||| |||||| ||| ||||||| |||||||||||| |||||| ||||| || | |||||||| |||||||||||||||| | |||    
T  3449289 aaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaagaaagtcgcaaaatcctgaa 3449387  T
Q  331 ttttaggatttaagttgggattttaacaacaaa 363  Q
    ||||||||||||||| |||||||| ||||||||    
T  3449388 ttttaggatttaagtcgggattttgacaacaaa 3449420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 3449085 - 3449238
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||| |||||||  |||||||  ||||| ||| ||||||||||  | || ||||||||||| |||||||||| ||||||| ||||  |||    
T  3449085 aaggttgtcaaaattgggattttgctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaatgattttattcaactact 3449184  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||  ||| |||||||||||||||||||| |||| |||||    
T  3449185 tttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttt 3449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 30727694 - 30727811
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttag 336  Q
    ||||||||||||||||||||||||||||||  |||||| ||||| |||||| ||||| |||| ||||||||||||||||||| ||||||| | ||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  337 gatttaagttgggatttt 354  Q
    |||||||||  |||||||    
T  30727794 gatttaagtcaggatttt 30727811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 239 - 362
Target Start/End: Complemental strand, 22137403 - 22137279
Alignment:
Q  239 aaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttagg 337  Q
    ||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||| || | || |||||||||||||||| || || | ||||||||||    
T  22137403 aaaatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttagg 22137304  T
Q  338 atttaagttgggattttaacaacaa 362  Q
    ||||||||  ||||||||| |||||    
T  22137303 atttaagtcaggattttaaaaacaa 22137279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 258
Target Start/End: Complemental strand, 27090796 - 27090645
Alignment:
Q  114 aaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||| |||||| ||||| |||||||| ||||||||||||| ||||| |  | || ||| |||||||| ||||||||||||||||||||||||| |    
T  27090796 aaggttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttactcaaggaat 27090697  T
Q  213 tttgtagaattgatatag------aaaattgtaaaatcgcaatcaaaatcga 258  Q
    |||||| ||| |||||||      ||||| ||||||||||||||||||||||    
T  27090696 tttgtataatcgatataggatagcaaaatcgtaaaatcgcaatcaaaatcga 27090645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 8560232 - 8560341
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||| | | | ||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||||  |    
T  8560232 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggttt 8560331  T
Q  213 tttgtagaat 222  Q
    ||||||||||    
T  8560332 tttgtagaat 8560341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 20766676 - 20766793
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| |   |||||| || ||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||| ||    
T  20766676 aaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaaaattttactcaagggct 20766775  T
Q  213 tttgtagaattgatatag 230  Q
    |||| ||||| |||||||    
T  20766776 tttggagaatcgatatag 20766793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 27676758 - 27676637
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatc 244  Q
    |||||||||| ||||||||||  | || |||||||||||||||||||||| ||||||||||||  ||||||||| ||| ||||||  |||| ||||||||    
T  27676758 cgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactacttttgtaaaatcgatataagaaatcgtaaaatc 27676659  T
Q  245 gcaatcaaaatcgatgaatttt 266  Q
     ||||||||||| ||| |||||    
T  27676658 acaatcaaaatcaatggatttt 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 18014345 - 18014243
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||| | |   ||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18014345 aaggttatcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 18014246  T
Q  213 ttt 215  Q
    |||    
T  18014245 ttt 18014243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 28136070 - 28135973
Alignment:
Q  159 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatc 256  Q
    ||||||| || || ||||||||| |||||||||||||||||||||||||  ||||||||| ||||||||||  |||||||||||| | ||||||||||    
T  28136070 aaaatcgagaatcgtaaaatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaataggaatcaaaatc 28135973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 17064453 - 17064330
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||||||||| |||||||||||||||||  |||||||| ||| ||||||| |||  |||| ||||||||||| | | ||||||||| | |||    
T  17064453 aaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctgaa 17064354  T
Q  331 ttttaggatttaagttgggatttt 354  Q
    ||||| ||||||||| ||||||||    
T  17064353 ttttaagatttaagtcgggatttt 17064330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 6136379 - 6136497
Alignment:
Q  148 aagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgca 247  Q
    ||||||| |||||||||   | || ||||||||||||||||||| || ||||||||||||  |||||| |||||| ||||||  |||| |||||||| ||    
T  6136379 aagggaaaagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcaca 6136478  T
Q  248 atcaaaatcgatgaatttt 266  Q
    ||||||||||||| |||||    
T  6136479 atcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 13286243 - 13286145
Alignment:
Q  168 actcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||| ||||||||||||||||||| || ||||||||||||  ||||||||||||| ||||||  |||| |||||||| |||| |||||||||| |||||    
T  13286243 actcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggatttt 13286145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 13006174 - 13006089
Alignment:
Q  118 ttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttac 203  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| |  | || |||||||||||||||||| ||| ||||||||    
T  13006174 ttgtcaaaatcgggatttgctttaggtcgaaagggaatagcaaaattgaaaatcgtaaaatcgcaatcaaaattgaatgattttac 13006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 24620197 - 24620331
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcg---caaaat-tc 327  Q
    |||| ||||||| ||||| |||||||||||||||||| ||||||  |||| |||| || |||| |||| |||||||||||||||||||   |||||| |     
T  24620197 aaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatctt 24620296  T
Q  328 gaattttaggatttaagttgggattttaacaacaa 362  Q
     ||||||||||||||||| || ||||| |||||||    
T  24620297 aaattttaggatttaagtcggaattttgacaacaa 24620331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 24649685 - 24649817
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgctt-attttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga- 329  Q
    |||| |||||||| || ||||||| |||||||||||||| ||||| | ||| |||||||||||| |||| |||||||||||| |||||  ||||| | |     
T  24649685 aaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcctag 24649784  T
Q  330 attttaggatttaagttgggattttaacaacaa 362  Q
    |||||| ||||||||| |||||||| |||||||    
T  24649785 attttacgatttaagtcgggattttgacaacaa 24649817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 19348873 - 19348790
Alignment:
Q  147 aaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||| | |||||||||| || ||| |||||||    
T  19348873 aaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggattttattgaaggacttttataaaatcgatatag 19348790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 41671533 - 41671426
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||||||  ||| ||| |||||| ||| ||||||||||  | |  ||||||||||| |||||||||||||||||||||||  |||    
T  41671533 aaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactact 41671434  T
Q  213 tttgtaga 220  Q
    ||||||||    
T  41671433 tttgtaga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 10872489 - 10872643
Alignment:
Q  113 aaaggttgtcaaaatcgggattt-actttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    |||||||||||||||| |||||| |||| ||| | |||||||| || ||||||   | || |||||||||||||||||| ||||||||||||| ||  ||    
T  10872489 aaaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactac 10872588  T
Q  212 ttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||| ||||| ||||||  |||| ||||||||  ||| ||||| |||| |||||    
T  10872589 ttttgaagaatcgatataagaaatcgtaaaatcagaataaaaattgatggatttt 10872643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 39428034 - 39427941
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||| |||||||||||||||||||||||| | ||||  |||||| ||||| |||||| ||||| |||| ||||| ||||||||||| |||||||    
T  39428034 aaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaat 39427941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 8155964 - 8156048
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcg 257  Q
    |||||||||||  || |||||||||||||||||||  |||||||||| |||||||||  ||| ||||||||||||||||| ||||    
T  8155964 taaaatcgcaactaagatcgaaggattttactcaactacttttgtagcattgatataagaaactgtaaaatcgcaatcaatatcg 8156048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 21553671 - 21553784
Alignment:
Q  117 gttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggatttt-actcaaggacttt 214  Q
    ||||| |||||||||| ||||||| |   ||||||||| ||| ||||||||||||  |||  ||||||||||||||||||| |||| | |||||||||||    
T  21553671 gttgtaaaaatcgggactttacttcaaatcgaaagggagtagaaaaatcgggactggtaa--tcgcaatcaaaatcgaaggttttttattcaaggacttt 21553768  T
Q  215 tgtagaattgatatag 230  Q
    ||||||||||||||||    
T  21553769 tgtagaattgatatag 21553784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 30727654 - 30727714
Alignment:
Q  133 tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    ||||||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  30727654 tttacttcaggttgaaagggaatagcaaaatcgagactcctaaaatcgcaatcaaaatcga 30727714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 9152761 - 9152905
Alignment:
Q  114 aaggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactt 213  Q
    ||||||||||||||| ||||||   ||||| |||||| ||| || ||||||   | || |||||||| || |||||||||| ||||| ||||||  | ||    
T  9152761 aaggttgtcaaaatcaggattttgcttaggtcgaaagagaagagtaaaatcaacaatcgtaaaatcgtaaccaaaatcgaaagatttgactcaactattt 9152860  T
Q  214 ttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    ||||||||| ||| ||  ||||||||||||| ||||||||||||||    
T  9152861 ttgtagaatcgat-tatgaaattgtaaaatcacaatcaaaatcgat 9152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 15806533 - 15806633
Alignment:
Q  262 attttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaac 360  Q
    ||||||| | |||| ||||| | |||||||||| |||||||||||||||| ||||||||||||||| | ||| ||||||||||| | ||||||| |||||    
T  15806533 attttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaag-tcggattttgacaac 15806631  T
Q  361 aa 362  Q
    ||    
T  15806632 aa 15806633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 42697142 - 42697049
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||  ||||| ||||||||||| ||||  ||||||||||||| ||||||  ||||  |||| |||||||||||||||||| |||||    
T  42697142 taaaatcgcaactaaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggatttt 42697049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 363
Target Start/End: Complemental strand, 28135826 - 28135722
Alignment:
Q  260 gaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaaca 358  Q
    ||||||||| ||||| || ||||| |||||||||| ||||| |||| ||||| ||||||||||||| | |||||||| ||||||| | || ||||| |||    
T  28135826 gaattttgcctatttgagaattttgctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgaca 28135727  T
Q  359 acaaa 363  Q
    |||||    
T  28135726 acaaa 28135722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 42696979 - 42696920
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatgga 291  Q
    |||| |||||||||||||||||||||||||||||||| ||||||  |||| |||||||||    
T  42696979 aaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 22137628 - 22137478
Alignment:
Q  117 gttgtcaaaatcgggatttacttt-aggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggactttt 215  Q
    ||||||||||||| |||||  ||| ||| |||||| ||| ||||||||| | | |  ||||||| ||| ||||||| ||| |||||||||||  ||||||    
T  22137628 gttgtcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatcaaagaattttactcaactactttt 22137529  T
Q  216 gtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||| ||||||  |||| |||||| |  ||||||||| |||| |||||    
T  22137528 gtagaatcgatataagaaatcgtaaaaccaaaatcaaaattgatggatttt 22137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 22356049 - 22356106
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatg 289  Q
    |||| |||||||||||||||||||  ||| |||||||||||||||||||| |||||||    
T  22356049 aaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatg 22356106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 362
Target Start/End: Complemental strand, 27676450 - 27676357
Alignment:
Q  270 tattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    |||||| ||||| | |||||||||| |||||| ||||||||| ||||||||||||| | | |||||| |||||||||  ||||||| |||||||    
T  27676450 tattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgacaacaa 27676357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 24649524 - 24649588
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaa 177  Q
    |||||||||||||| |||| ||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  24649524 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 17796859 - 17796774
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    |||||| ||||| |||||||||| |||||||||||  ||||||||||||| |||| || |||| ||||||||| ||||||||| ||||    
T  17796859 taaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgata-ag-aaatcgtaaaatcgaaatcaaaattgatg 17796774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 19105299 - 19105214
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    |||||| ||||| |||||||||| |||||||||||  ||||||||||||| |||| || |||| ||||||||| ||||||||| ||||    
T  19105299 taaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgata-ag-aaatcgtaaaatcgaaatcaaaattgatg 19105214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 8560351 - 8560390
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  8560351 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 8560390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 18014226 - 18014187
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  18014226 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 18014187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 19348788 - 19348749
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  19348788 atagcaaattcgggactcgtaaaatcgcaatcaaaatcga 19348749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 21553786 - 21553825
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  21553786 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 21553825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 17796362 - 17796272
Alignment:
Q  270 tattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-attttaggatttaagttgggattttaacaa 359  Q
    |||||||||||| | ||||| |||| |||  ||||||||||| |||||| |||||| | | |||||| |||||||||||| ||||| ||||    
T  17796362 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 17796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 19104802 - 19104712
Alignment:
Q  270 tattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-attttaggatttaagttgggattttaacaa 359  Q
    |||||||||||| | ||||| |||| |||  ||||||||||| |||||| |||||| | | |||||| |||||||||||| ||||| ||||    
T  19104802 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 19104712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 8592293 - 8592330
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatc 191  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  8592293 atagcaaaatcgggtctcgtaaaatcgcaatcaaaatc 8592330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 20766795 - 20766831
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaat 190  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  20766795 atagcaaaatcgggactcataaaatcacaatcaaaat 20766831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 1405138 - 1404985
Alignment:
Q  113 aaaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    ||||||||||||||||| || |||| |||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||    
T  1405138 aaaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaac 1405039  T
Q  212 ttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattt 265  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||    
T  1405038 ttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgatggattt 1404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 20064077 - 20063924
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||  ||||||| |||  |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  20064077 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 20063978  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||    
T  20063977 tttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggatttt 20063924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 258
Target Start/End: Original strand, 19262091 - 19262236
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||| ||||||| | ||||||| | | |||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  19262091 aaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 19262190  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||    
T  19262191 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcga 19262236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 30433169 - 30433016
Alignment:
Q  114 aaggttgtcaaaatcgggat-ttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||||||||||||||||  |||||| ||| ||||| | ||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  30433169 aaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggact 30433070  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||| |||||| ||||||| |||||||||||||||||||||||| |||| |||||    
T  30433069 tttatagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggatttt 30433016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 118 - 266
Target Start/End: Original strand, 31237755 - 31237904
Alignment:
Q  118 ttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 216  Q
    ||||||||||| ||| ||||||| ||  | ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  31237755 ttgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttg 31237854  T
Q  217 tagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    || ||| |||||||||||||||||||| |||||||||||||||| |||||    
T  31237855 taaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggatttt 31237904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 113 - 259
Target Start/End: Original strand, 25538919 - 25539066
Alignment:
Q  113 aaaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    |||||||||||||||||| | ||||| | ||| ||||||||||||| ||||||||| ||| ||||||||||||||||||  |||||||||||| ||  ||    
T  25538919 aaaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaactac 25539018  T
Q  212 ttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgat 259  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  25539019 ttttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcgat 25539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 27523881 - 27523980
Alignment:
Q  124 aaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    ||||||||| ||||||| | | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 27523980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 20034004 - 20034116
Alignment:
Q  121 tcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 219  Q
    |||||||||||| ||||||| | | ||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  20034004 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtag 20034103  T
Q  220 aattgatatagaa 232  Q
    ||| ||| |||||    
T  20034104 aatcgatgtagaa 20034116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 21869096 - 21869212
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||| ||||||||||||| ||||||| | | ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||    
T  21869096 aaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgact 21869195  T
Q  213 tttgtagaattgatata 229  Q
    |||||||||| ||||||    
T  21869196 tttgtagaatcgatata 21869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 1404915 - 1404784
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||| ||||||||||||||| ||||||| || ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||| |  ||    
T  1404915 aaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaa 1404816  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||||| |||||||| |||||||    
T  1404815 ttttagaatttaagtcgggattttgacaacaa 1404784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 8428576 - 8428425
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||| ||||||   | | |||||||||||||||||||||||||||||| |||||  | |    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaactatt 8428477  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatt 264  Q
    ||||||||||  ||||  ||||| |||||||||||||  |||||||||||||    
T  8428476 tttgtagaatcaatatcaaaaatcgtaaaatcgcaatacaaatcgatgaatt 8428425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 31237974 - 31238105
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| |||||||||||||||||||||||| ||||| | ||||||| |||| ||||||| |||| |||| ||||||||||||||||| ||||||| | | |    
T  31237974 aaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctaga 31238073  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  31238074 ttttaggatttaagtcgggattttgacaacaa 31238105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 974693 - 974575
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcggga-ctcctaaaatcgcaatcaaaatcgaaggattttactcaaggac 211  Q
    |||||| |||| ||||||| ||||||| | | ||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||    
T  974693 aaggttatcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 974594  T
Q  212 ttttgtagaattgatatag 230  Q
    ||||||||||| |||||||    
T  974593 ttttgtagaatcgatatag 974575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 240 - 361
Target Start/End: Original strand, 25539231 - 25539353
Alignment:
Q  240 aaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaattttagga 338  Q
    |||||||| |||||||||||| |||||||||||||| ||||| | ||||||||||||||| ||||||||||||||| | ||||| | | |||||||||||    
T  25539231 aaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttgaattttagga 25539330  T
Q  339 tttaagttgggattttaacaaca 361  Q
    ||||| | |||||||||||||||    
T  25539331 tttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 35565951 - 35566083
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||  |||||||||||||||| ||||||| |||||| ||||| ||| |||||||| ||||||||||  |||||||||||||||||| | |||    
T  35565951 aaatcgtaaaactgcaatcaaaatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaa 35566050  T
Q  331 ttttaggatttaagttgggattttaacaacaaa 363  Q
    ||||  |||||||||||||||||| ||||||||    
T  35566051 ttttgtgatttaagttgggattttgacaacaaa 35566083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 20063841 - 20063715
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaa-ttcgaatttta 335  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||| |||||| ||||||||  |||||||  | | ||||||    
T  20063841 gtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggatttta 20063742  T
Q  336 ggatttaagttgggattttaacaacaa 362  Q
    || ||||||| |||||||| |||||||    
T  20063741 ggttttaagtcgggattttgacaacaa 20063715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 362
Target Start/End: Original strand, 23863323 - 23863449
Alignment:
Q  237 gtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaatttta 335  Q
    |||||||||||| ||||||||||| ||||||| ||||||  |||| |||||||||||| |||| ||||| |||||||||||||||||||||   ||||||    
T  23863323 gtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgatttta 23863422  T
Q  336 ggatttaagttgggattttaacaacaa 362  Q
    | |||||||| |||||||| |||||||    
T  23863423 gaatttaagtcgggattttgacaacaa 23863449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 7302136 - 7302027
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||| | |  ||| |||  ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  7302136 aaggttatcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggact 7302037  T
Q  213 tttgtagaat 222  Q
    ||||||||||    
T  7302036 tttgtagaat 7302027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 34578210 - 34578134
Alignment:
Q  146 gaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  34578210 gaaagggagtagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaat 34578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 36429980 - 36429849
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| ||| |||||||||||||||||||| ||||||| ||||||  |||| | ||||| | || |||| ||||||||||||||||||||||||| | | |    
T  36429980 aaatcgtacaatcgcaatcaaaatcgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctaga 36429881  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    || ||||||||||||||||||||| |||||||    
T  36429880 ttataggatttaagttgggattttgacaacaa 36429849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 31578136 - 31578007
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaa 330  Q
    |||| ||||||| ||||||||||| |||| |||||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||||||||| |  ||    
T  31578136 aaatcgtaaaattgcaatcaaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaa 31578038  T
Q  331 ttttaggatttaagttgggattttaacaaca 361  Q
    |||||  |||||||| |||||||| ||||||    
T  31578037 ttttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 16767079 - 16766996
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatc 256  Q
    |||||||||||||||||| ||||||||||||||||  |||||| |||||| ||||||  |||| ||||||||||||||||||||    
T  16767079 taaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatc 16766996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 36430156 - 36430049
Alignment:
Q  159 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||||  | ||||||||||| |||| | ||||   |||||| ||||||||||||||    
T  36430156 aaaattgggactcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcga 36430057  T
Q  259 tgaatttt 266  Q
    || |||||    
T  36430056 tggatttt 36430049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 19245943 - 19245826
Alignment:
Q  114 aaggttgtcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||||||  ||| | |  |||||||||||||||||||   | || ||||||||||||||||||| |||||||||||| ||  |||    
T  19245943 aaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactact 19245844  T
Q  213 tttgtagaattgatatag 230  Q
    |||||||||| |||||||    
T  19245843 tttgtagaatcgatatag 19245826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 30432551 - 30432420
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-a 330  Q
    |||| ||||||| |||||||||||||||| ||||||  ||||||  |||| |||||||||||| |||| ||||||| ||||||||||| ||||| | | |    
T  30432551 aaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatggatttgagtcgttgaaggcgaagaaagtcgaaaaatcctaga 30432452  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||| |  ||||||| |||||||    
T  30432451 ttttagaatttaaatcaggattttgacaacaa 30432420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 15588690 - 15588782
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||| |||||||||||||||||||||||  || || |||| || ||||||  ||||| ||||||||||||||||||||||| |||||    
T  15588690 taaaatcgcaaccaaaatcgaaggattttactcaattac-ttcgtaggatcgatataagaaattataaaatcgcaatcaaaatcgatggatttt 15588782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 13502481 - 13502601
Alignment:
Q  146 gaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcg 245  Q
    ||||||||| || |||||||  | || |||||||| ||||||||| ||||||| ||| ||||  | |||||||||||  |||||  |||| |||||||||    
T  13502481 gaaagggaagagtaaaatcgaaaatcgtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcg 13502580  T
Q  246 caatcaaaatcgatgaatttt 266  Q
    ||||||||||||||| |||||    
T  13502581 caatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 19491982 - 19491896
Alignment:
Q  238 taaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    ||||||||||||||||||||||| ||||| | |||||| ||||| | |||||||||| |||| || ||| ||||||||||||||||||    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaat 19491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 35565789 - 35565885
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggatttta---ctcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||||||  |||||||||||||||||   |||||  ||||||||||||| ||||||  ||||  ||||||| ||||||||||||||| |||||    
T  35565789 taaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcacaatcaaaatcgatggatttt 35565885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 362
Target Start/End: Original strand, 1690790 - 1690890
Alignment:
Q  263 ttttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaaca 361  Q
    |||||| |||||| |||||||||||||||| | |||| | |||||||||||||||| |||||| |  ||||||| ||||||||| ||  |||| ||||||    
T  1690790 ttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttgacaaca 1690889  T
Q  362 a 362  Q
    |    
T  1690890 a 1690890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 325
Target Start/End: Complemental strand, 31023326 - 31023262
Alignment:
Q  261 aattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    |||||||| |||||||||||| ||||||| |||| |||| ||||| ||||| |||||||||||||    
T  31023326 aattttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaat 31023262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 15588847 - 15588969
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||||||||| |||| ||||  ||||||  ||||||  |||| ||||||| |||| |||  |||||||||||||||| |||||||| | |||    
T  15588847 aaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaa 15588946  T
Q  331 ttttaggatttaagttgggatttt 354  Q
    ||||| || |||||| ||||||||    
T  15588947 ttttaaga-ttaagtcgggatttt 15588969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 34578124 - 34578085
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34578124 atagcaaaatcgggactcgtaaaatcgcaatcaaaatcga 34578085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 266
Target Start/End: Original strand, 1690566 - 1690656
Alignment:
Q  176 aatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||| ||||| ||||||| |||||| ||  ||||||||  ||| ||||||  || | ||||||||||||||||||||||| ||||||    
T  1690566 aatcgcaaccaaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcgataaatttt 1690656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 15516625 - 15516687
Alignment:
Q  301 ttgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||| ||||||||||||| | |||| ||| ||||||||||| ||||||||||||||    
T  15516625 ttgaaggtgaataaagtcgcaaaatgctgaatattaagatttaagttgcgattttaacaacaa 15516687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 34167646 - 34167548
Alignment:
Q  110 tataaaggttgtcaaaatcgggatttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatc-aaaatcgaaggattttactcaa 207  Q
    |||||||||||| ||||||  |||||  |||  || ||||||||||||||||||||  | || ||||||||||||| || |||||| ||||||||||||    
T  34167646 tataaaggttgtaaaaatcaagattttatttcagatgaaagggaatagcaaaatcgaaaatcgtaaaatcgcaatctaacatcgaatgattttactcaa 34167548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 20034114 - 20034155
Alignment:
Q  152 gaatagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  20034114 gaatagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 20034155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 27407081 - 27406993
Alignment:
Q  177 atcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattt 265  Q
    ||||||||||||||| ||| |||||||||||  ||||||| | |||  |||||  ||||  |||||||||||||||||| |||| ||||    
T  27407081 atcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 17995158 - 17995056
Alignment:
Q  261 aattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaa 359  Q
    |||||||| |||||| | ||| | ||| | |||| |||| |||| |||||| ||| ||||||||||| | |||||||| ||||||| || ||||||||||    
T  17995158 aattttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaa 17995059  T
Q  360 caa 362  Q
    |||    
T  17995058 caa 17995056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 16766809 - 16766728
Alignment:
Q  265 ttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagt 345  Q
    ||||||||||||||||| | |||||||||| | || ||||||||||| ||| ||| ||||| |  ||||||| |||||||||    
T  16766809 ttgcttattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagt 16766728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 27749344 - 27749393
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    ||||||||||||| |||| ||| || |||||||||||| |||||||||||    
T  27749344 taaaatcgcaatctaaattgaatgagtttactcaaggatttttgtagaat 27749393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 8795 - 8642
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||| ||| |||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||| | |    
T  8795 aaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtatt 8696  T
Q  213 tttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    || ||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  8695 ttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttt 8642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 8575 - 8444
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat-tcgaa 330  Q
    |||| |||||||||||||||||||| ||| |||||||||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||   | |    
T  8575 aaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtgga 8476  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  8475 ttttaggatttaagtagggattttgacaacaa 8444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 156 - 362
Target Start/End: Original strand, 22 - 229
Alignment:
Q  156 agcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaat 255  Q
    ||||||||||  | || |||||||| || |||||||||||||||||||||||  ||||| ||||||| ||||||  ||||||||||||| ||||||||||    
T  22 agcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactacttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaat 120  T
Q  256 cgatgaatttt-gcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattt 353  Q
    ||||| ||||| || |||||||| |||||||||||||||| |||| ||||| ||||||||||||||||||| | | |||||||||||||||| ||||| |    
T  121 cgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcgggatct 220  T
Q  354 taacaacaa 362  Q
    || ||||||    
T  221 tatcaacaa 229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 7268 - 7383
Alignment:
Q  151 ggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatc 250  Q
    ||||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||| ||||||||||    
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatc 7367  T
Q  251 aaaatcgatgaatttt 266  Q
    ||||||||||||||||    
T  7368 aaaatcgatgaatttt 7383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 7452 - 7583
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||   || |||||||| |||||||||||||||| | |||    
T  7452 aaatcgtaaaatcgcaattaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaa 7551  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    |||||| |||||||| |||||| |||||||||    
T  7552 ttttagaatttaagtcgggattctaacaacaa 7583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 121 - 266
Target Start/End: Original strand, 8741 - 8887
Alignment:
Q  121 tcaaaatcgggattta-ctttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 219  Q
    |||||||||||||||  |||||||  |||| || | ||||||||||  | || |||||||| ||||||||||||||||||||||||||  ||||||||||    
T  8741 tcaaaatcgggattttgctttaggttgaaaaggtagagcaaaatcgaaaatcataaaatcgtaatcaaaatcgaaggattttactcaactacttttgtag 8840  T
Q  220 aattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||| ||||||  || |||||||||||||||||||||||||| |||||    
T  8841 aatagatataagaacttgtaaaatcgcaatcaaaatcgatggatttt 8887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 9049 - 9110
Alignment:
Q  264 tttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaat 325  Q
    ||||| ||||| |||||||| |||||||||| |||| ||||||||||| ||| || ||||||    
T  9049 tttgcctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaat 9110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 8510 - 8393
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||||| | ||||||||| ||| ||||| ||||||| |||||| ||| ||||||||||||||||||||||||||| |    
T  8510 aaggttatcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttactcaaggagt 8411  T
Q  213 tttgtagaattgatatag 230  Q
    | ||||||||||||||||    
T  8410 tgtgtagaattgatatag 8393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 8391 - 8352
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  8391 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 8352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 14701 - 14810
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||  ||||||| | | ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  14701 aaggttatcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaagact 14800  T
Q  213 tttgtagaat 222  Q
    ||||||||||    
T  14801 tttgtagaat 14810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 14820 - 14859
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcga 193  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  14820 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 14859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 38302 - 38410
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||| |||||| |||||| | |||||||||||||||||| |||||    
T  38302 aaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaattgcaatc-agatcgaaggattttactcatggact 38400  T
Q  213 tttgtagaat 222  Q
    ||||||||||    
T  38401 tttgtagaat 38410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 93540 - 93633
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    |||||||| ||||||||||||||||||||| ||||  ||||||||||||| ||||||  |||| |||||||||||||||||||||||| |||||    
T  93540 taaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 93703 - 93832
Alignment:
Q  232 aaattgtaaaatcgcaatcaaaatcgatgaattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaa 330  Q
    |||| |||||||||||||||||||||||| |||| || |||||||| ||| | |||||||||| |||  |||| |||||||||| |  |||||||| | |    
T  93703 aaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctgga 93800  T
Q  331 ttttaggatttaagttgggattttaacaacaa 362  Q
    ||||||||||||||| |||||||| |||||||    
T  93801 ttttaggatttaagtcgggattttgacaacaa 93832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 182 - 81
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    |||||| |||||||||||| ||||||| | | | ||||||| ||||||||||||||||| |||||| | ||| |||||||||||||||||||||||||||    
T  182 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaaggact 83  T
Q  213 tt 214  Q
    ||    
T  82 tt 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 990 - 885
Alignment:
Q  147 aaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgc 246  Q
    |||||||| |||||||| |  | || |||||| |||||||||||||||| |||||||||||  ||||||||||||  ||||||  |||||||||||||||    
T  990 aaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgc 891  T
Q  247 aatcaa 252  Q
    ||||||    
T  890 aatcaa 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 76084 - 76192
Alignment:
Q  114 aaggttgtcaaaatcggga-tttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggact 212  Q
    ||||||||||||||||||| |||||||   | ||||||| |||||||||  |||||||| |||||| ||||| || ||||||||||||||||||| ||||    
T  76084 aaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaattgcaat-aagatcgaaggattttactcaaagact 76182  T
Q  213 tttgtagaat 222  Q
    ||||||||||    
T  76183 tttgtagaat 76192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 132943 - 132999
Alignment:
Q  166 ggactcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 222  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  132943 ggactcgtaaaatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaat 132999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 133009 - 133058
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttact 204  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||| ||||    
T  133009 atagcaaagtcgggactcgtaaaatcgcaatcaaaatc-aaggattctact 133058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 142926 - 142866
Alignment:
Q  170 tcctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||    
T  142926 tcctaaaatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatatag 142866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 48497 - 48584
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    ||||||| |||||||||||||||||||||||| ||  ||||||||||||| |||| |  || | |||||||||| |||||||||||||    
T  48497 taaaatctcaatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatg 48584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 61149 - 61236
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcgatg 260  Q
    ||||||| ||||||||||||||| |||||||| ||  ||||||||||||| ||||||  |||| ||||||||| || |||||||||||    
T  61149 taaaatcacaatcaaaatcgaagaattttacttaactacttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatg 61236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 48815 - 48916
Alignment:
Q  261 aattttgcttattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattcga-attttaggatttaagttgggattttaacaa 359  Q
    |||||||||| |||| ||||| |  ||||||||| |||| ||||||||||| ||||| ||||||||| | |||||||||||||||| || ||||| ||||    
T  48815 aattttgctt-ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaa 48913  T
Q  360 caa 362  Q
    |||    
T  48914 caa 48916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 24708 - 24646
Alignment:
Q  145 cgaaagggaatagcaaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaa 207  Q
    ||||||||| ||||||||||||||||| |||||| | |||||||||| || ||||||||||||    
T  24708 cgaaagggagtagcaaaatcgggactcgtaaaattgtaatcaaaatcaaaagattttactcaa 24646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 24621 - 24580
Alignment:
Q  154 atagcaaaatcgggactcctaaaatcgcaatcaaaatcgaag 195  Q
    |||||||| ||| ||||| |||||||||||||||||||||||    
T  24621 atagcaaagtcgagactcataaaatcgcaatcaaaatcgaag 24580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 626 - 570
Alignment:
Q  174 aaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 230  Q
    ||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||    
T  626 aaaatcgcaattaaaatcgagtgatgttactcgaggacttttgtagaattgatatag 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 664 - 607
Alignment:
Q  199 tttactcaaggacttttgtagaattgatatagaaaattgtaaaatcgcaatcaaaatcga 258  Q
    |||||||||||||||||||||||| |||||||   || | ||||||||||| ||||||||    
T  664 tttactcaaggacttttgtagaatagatatag--gatagcaaaatcgcaattaaaatcga 607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 33232 - 33176
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatata 229  Q
    ||||||||||||||||||||||| ||||||||||   ||||||||||||| ||||||    
T  33232 taaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgatata 33176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 33240 - 33204
Alignment:
Q  230 gaaaattgtaaaatcgcaatcaaaatcgatgaatttt 266  Q
    ||||||||||||||||||||||||||||| |||||||    
T  33240 gaaaattgtaaaatcgcaatcaaaatcgaagaatttt 33204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 145882 - 145826
Alignment:
Q  173 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatata 229  Q
    |||||| |||||||||||||||||||||||||||   ||||||||||||| ||||||    
T  145882 taaaatagcaatcaaaatcgaaggattttactcacttacttttgtagaatcgatata 145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 37011 - 37051
Alignment:
Q  224 gatatagaaaattgtaaaatcgcaatcaaaatcgatgaatt 264  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  37011 gatataaaaaatggtaaaatcgcaatcaaaatcgatgaatt 37051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 362
Target Start/End: Original strand, 37201 - 37294
Alignment:
Q  270 tattttaggattttactatggatttaagtcattgaaggtgaagaaagtcgcaaaattc-gaattttaggatttaagttgggattttaacaacaa 362  Q
    ||||||| |||| | |||||||||| |||  ||||||||||| ||| | ||||||||| ||||||||  |||||||| || ||||| |||||||    
T  37201 tattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgacaacaa 37294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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