View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1444_low_11 (Length: 249)
Name: NF1444_low_11
Description: NF1444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1444_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 15724021 - 15724254
Alignment:
| Q |
12 |
aaaggcccaacaagggaggcaagtccattacagaccacctacgttggcaaagagttgtggttcagacttcagacaataaggcgctcagagccaagtcggg |
111 |
Q |
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| T |
15724021 |
aaaggcccaacaagggaggcaagtccattacagaccacctacgttggcaaagagttgtggttcagacttcagacaataaggcgctcagagccaagatggg |
15724120 |
T |
|
| Q |
112 |
ccatcaaaacgatcgaacaatcgtttggcctttgcgctgagaggggcacaaccagttttgcttacatgacatgctcaacaatctatagtagagtaccctc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
15724121 |
ccatcaaaacgatcgaacaatcgtttggcctttgcgctgagaggggcacaaccagtttttcttacatgacatgctcaacaatctatagtagagtaccctc |
15724220 |
T |
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| Q |
212 |
acggcaaaaacaggtacacattcttatttcgaga |
245 |
Q |
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|||| ||||||||||||||||||||||||||||| |
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| T |
15724221 |
acggaaaaaacaggtacacattcttatttcgaga |
15724254 |
T |
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