View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14451_high_25 (Length: 288)
Name: NF14451_high_25
Description: NF14451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14451_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 11 - 275
Target Start/End: Original strand, 47371214 - 47371491
Alignment:
| Q |
11 |
ataatatgtacaaatttgaaataaatctaaatttatttgatatagtgttgagatctatcaaaattaacgttttaaaatcttttattttatgatgttactc |
110 |
Q |
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| T |
47371214 |
ataatatgtacaaatttgaaataaatctaaatttatttgatatagtgttgagatctatcaaacttaacgttttaaaatcttttattttatgatgttactc |
47371313 |
T |
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| Q |
111 |
ttgatgcaactcaacaatgtacaaaatgattttaatttatgcagagagagattaaaaaa-------------tttttaaacttcaacaaatgatgctgat |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
47371314 |
ttgatgcaactcaacaatgtacaaaatgattttaatttatgcagagagagattaaaaaataacaacgaactttttttaaacttcaacaaatgatgctgat |
47371413 |
T |
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| Q |
198 |
cttgttcgacatcgcatattaggacgtgagtcgagttatttaccttgatattggcaagggtttcattcgtcacatatg |
275 |
Q |
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| T |
47371414 |
cttgttcgacatcacatattaggacgtgagtcgagttatttaccttgatattggcaagggtttcattcgtcacatatg |
47371491 |
T |
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