View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14451_high_27 (Length: 270)
Name: NF14451_high_27
Description: NF14451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14451_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 12325954 - 12325714
Alignment:
| Q |
12 |
atgaagtgatatctaatggaataaatggaacaagaaatggtgcacttcaactagtaagtaaaatttgttatgtttttaccgtgttgctaaacagcaatta |
111 |
Q |
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| T |
12325954 |
atgaagtgatatctaatggaataaatggaacaagaaatggtgcacttcaactagtaagtaaaaaatgttatgtttttaccgtgtagctaaatagcaatta |
12325855 |
T |
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| Q |
112 |
tcgcgtagccgtatttaaacaaactgctatttcacgggatccgtgattaagaacgctcgcattatataaattaactctagcaaaacggttgtattttcgg |
211 |
Q |
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| T |
12325854 |
tggcgtagcggtatttaaacaaactgctatttcacgcaatccgtgattgacaacactggcattacatgaattagctctagcaaaaccgttgcattttcgg |
12325755 |
T |
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| Q |
212 |
tgttttgacagtaatgtttgtgttttttcagatgcaagctg |
252 |
Q |
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| T |
12325754 |
tgttttgacagtaatgtttgtgttttttcagatgcaagctg |
12325714 |
T |
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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 28597793 - 28597743
Alignment:
| Q |
13 |
tgaagtgatatctaatggaataaatggaacaagaaatggtgcacttcaact |
63 |
Q |
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| T |
28597793 |
tgaagtgatatctagtggaataaatggaaccagaaatggtgctctacaact |
28597743 |
T |
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