View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14451_low_15 (Length: 420)
Name: NF14451_low_15
Description: NF14451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14451_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 24084178 - 24084459
Alignment:
| Q |
1 |
ataggtgtctaaagagcaattttcccaacatttacggcagagaagactcgccctttggattgctcaatccctaaaataagtctaccgtgagttacgatct |
100 |
Q |
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| T |
24084178 |
ataggtgtctaaagagcaattttcccaacatttactgcagagaagactcaccctttggattgctcaatccctaaaataagtctaccgtgagttacgatct |
24084277 |
T |
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| Q |
101 |
aatgtaaaa-aagtcgattgggagttaagatttgatgatttttattcaatcgggaattacgacccgataaatcaaagggcatttgagcaaaactgacatg |
199 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
24084278 |
aatgtaaaaaaagtcgattgggagttaagatttgatgatttttattcaatcgggaattacgacccgataaatcaaagggcatttgagcaaaactgacagg |
24084377 |
T |
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| Q |
200 |
ctcgtagaacaattacctacaatagaacatgtgtaatgctatatgaacacactttcttgacaacaatatgtgatgcctacac |
281 |
Q |
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||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24084378 |
ctcgttgaacaattacctacaatagaacacgtgtaatgctatatgaacacactttcttgacaacaatatgtgatgcctacac |
24084459 |
T |
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