View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14452_high_3 (Length: 353)
Name: NF14452_high_3
Description: NF14452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14452_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 14 - 337
Target Start/End: Complemental strand, 24670006 - 24669683
Alignment:
| Q |
14 |
atatctttaactagttcatatttttacgttctttttagttttaaatagttcattaaaggtaatcttcatacactctagtctaaaaacatatttacaattt |
113 |
Q |
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| T |
24670006 |
atatctttaactagttcatatttttactttttttttagttttaaatagttcattaaaggtaatcttcatacactctagtctaaaaacatatctacaattt |
24669907 |
T |
|
| Q |
114 |
tggttaataatcatatatccattatgtgatgtatataactaaactagatattttaccaagatctaatctaaattaaagtatcttaaatttgttgtattca |
213 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24669906 |
tggttaataaacatatatccattatgtgatgtatataactaaactagatattttaccaagatctaatctaaattaaagtatcttaaatttgttgtattca |
24669807 |
T |
|
| Q |
214 |
agaaagggtgtttatcaaagaatttattattcaaaggagtcacatgcatgcacatgacaaacactacacacatattttatgtgtggctttggttggattt |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24669806 |
agaaagggtgtttatcaaagaatttattattcaaaggagtcacatgcatgcacatgacaaacactacacacatattttatgtgtggctttggttggattt |
24669707 |
T |
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| Q |
314 |
gctagataagtcatcacgcttgtg |
337 |
Q |
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|||||||||||||||||||||||| |
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| T |
24669706 |
gctagataagtcatcacgcttgtg |
24669683 |
T |
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