View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14455_high_12 (Length: 236)
Name: NF14455_high_12
Description: NF14455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14455_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 7422947 - 7423167
Alignment:
| Q |
1 |
gtagaacagtgggccttgggtgtttgcaaggatccaaaaatcaaatgcatatccaccacactccccaaaatattcacagtacatggattatggccctcga |
100 |
Q |
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| T |
7422947 |
gtagaacagtgggccttgggtgtttgcaaggatccaaaaatcaaatgcatatccaccacactccccaaaatattcacagtacatggattatggccctcga |
7423046 |
T |
|
| Q |
101 |
acaagagccaatcacaaccatctgtctgctcgcatgaagtgttaaatcaagc-gacgtatgcttattaatattttgcatttttcttttgctatcttatat |
199 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7423047 |
acaagggccaatcacaaccatctgtctgctcgcatgaagtgttaaatcaagctgacgtatgcttattaatattttgcatttttcttttgctatcttatat |
7423146 |
T |
|
| Q |
200 |
gacttgaagtcttgaacataa |
220 |
Q |
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||||||||||||||||||||| |
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| T |
7423147 |
gacttgaagtcttgaacataa |
7423167 |
T |
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